LOCUS       DBBZYD010000001        62885 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.001, whole genome shotgun sequence.
ACCESSION   DBBZYD010000001 DBBZYD010000000
VERSION     DBBZYD010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 62885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 62885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..62885
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.001"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..231)
                     /locus_tag="ACJJDL_000001"
     CDS             complement(<1..231)
                     /locus_tag="ACJJDL_000001"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7572807.1"
                     /translation="MFDLKNGYTPSKSNKEYWENGSIPWFRMEDIRENGRILDNSLKH
                     ISKSAVKGGKLFPAKSIMMSTTATIGEHALIKV"
     gene            complement(285..878)
                     /locus_tag="ACJJDL_000002"
     CDS             complement(285..878)
                     /locus_tag="ACJJDL_000002"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7572808.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGGENGIAIIKTGQAVSKQKI
                     SNNIGSYPVINSGKEPLGYIDEWNTENDPIGITTRGAGVGSITWQEGRYFRGNLNYAV
                     TIKNRTELDVRFLYHILLEFEQEIHALCTFTGIPALNASNLKKLLIPIPPLETQQKIV
                     KILDKFTELEAELALRKRQYRYYRDFLLDFDNQIGGG"
     gene            complement(1044..2054)
                     /locus_tag="ACJJDL_000003"
     CDS             complement(1044..2054)
                     /locus_tag="ACJJDL_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HGG7572809.1"
                     /translation="MSIILYTANDGTAQFALQEFGGQLWLTQADMAELYQTTKQNISK
                     HIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQF
                     RQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYA
                     TSQDYNPKSSESQTFFAAVQNKLHYAASRQTAAELIYSRADSSKDFMGLTTFQGAIPT
                     LNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFSGLYGQ
                     GTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDR
                     TK"
     gene            complement(2051..3595)
                     /locus_tag="ACJJDL_000004"
     CDS             complement(2051..3595)
                     /locus_tag="ACJJDL_000004"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HGG7572810.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAVVSNPPYSINWIGSGDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEISETVAKIERLRREIDEV
                     IAEIEA"
     gene            complement(3668..4672)
                     /gene="rfaD"
                     /locus_tag="ACJJDL_000005"
     CDS             complement(3668..4672)
                     /gene="rfaD"
                     /locus_tag="ACJJDL_000005"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HGG7572811.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            complement(4713..5832)
                     /locus_tag="ACJJDL_000006"
                     /pseudo
     CDS             complement(4713..5832)
                     /locus_tag="ACJJDL_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
     gene            complement(5834..7069)
                     /locus_tag="ACJJDL_000007"
     CDS             complement(5834..7069)
                     /locus_tag="ACJJDL_000007"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7572812.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(7106..8077)
                     /gene="hldA"
                     /locus_tag="ACJJDL_000008"
     CDS             complement(7106..8077)
                     /gene="hldA"
                     /locus_tag="ACJJDL_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HGG7572813.1"
                     /translation="MSVKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(8132..8872)
                     /gene="pyrF"
                     /locus_tag="ACJJDL_000009"
     CDS             complement(8132..8872)
                     /gene="pyrF"
                     /locus_tag="ACJJDL_000009"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HGG7572814.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAASTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(9398..10045)
                     /gene="adk"
                     /locus_tag="ACJJDL_000010"
     CDS             complement(9398..10045)
                     /gene="adk"
                     /locus_tag="ACJJDL_000010"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HGG7572815.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            10260..11099
                     /gene="htpX"
                     /locus_tag="ACJJDL_000011"
     CDS             10260..11099
                     /gene="htpX"
                     /locus_tag="ACJJDL_000011"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HGG7572816.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGAGSLLAYSAVVG
                     FSGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(11400..11960)
                     /locus_tag="ACJJDL_000012"
     CDS             complement(11400..11960)
                     /locus_tag="ACJJDL_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572817.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(12074..12466)
                     /locus_tag="ACJJDL_000013"
     CDS             complement(12074..12466)
                     /locus_tag="ACJJDL_000013"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7572818.1"
                     /translation="MGKRMTFDTAKSRFQEKFPHLELLEFSGIYKPSSVRCPTHGVVQ
                     LLYYDTAIKSKYGCPECGKLKMKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALN
                     TPYGSIRTKLDGRSNPDNLVCNRYKVLL"
     gene            complement(12674..13066)
                     /locus_tag="ACJJDL_000014"
     CDS             complement(12674..13066)
                     /locus_tag="ACJJDL_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7572819.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(13183..13593)
                     /locus_tag="ACJJDL_000015"
     CDS             complement(13183..13593)
                     /locus_tag="ACJJDL_000015"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7572820.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(13607..13990)
                     /locus_tag="ACJJDL_000016"
     CDS             complement(13607..13990)
                     /locus_tag="ACJJDL_000016"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7572821.1"
                     /translation="MPKSLSLQDVQLRFSSKFPDKTVLKFTKNYEPVTIQCPLHGSVV
                     YGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGEIYEFASTLAASKFIGCSN
                     STLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(14459..15757)
                     /locus_tag="ACJJDL_000017"
     CDS             complement(14459..15757)
                     /locus_tag="ACJJDL_000017"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HGG7572822.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDVVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVEACKPIYETMPGWRESTFGVKDYGA
                     LPENAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(15861..17012)
                     /locus_tag="ACJJDL_000018"
     CDS             complement(15861..17012)
                     /locus_tag="ACJJDL_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HGG7572823.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTETVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTIERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            17347..18726
                     /gene="norM"
                     /locus_tag="ACJJDL_000019"
     CDS             17347..18726
                     /gene="norM"
                     /locus_tag="ACJJDL_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HGG7572824.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            18905..19945
                     /gene="murB"
                     /locus_tag="ACJJDL_000020"
     CDS             18905..19945
                     /gene="murB"
                     /locus_tag="ACJJDL_000020"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HGG7572825.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVIGAEKAAALLEQHPDMPHYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDKQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            19957..20607
                     /locus_tag="ACJJDL_000021"
     CDS             19957..20607
                     /locus_tag="ACJJDL_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HGG7572826.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLAYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            20662..21429
                     /locus_tag="ACJJDL_000022"
     CDS             20662..21429
                     /locus_tag="ACJJDL_000022"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7572827.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGFPAPDFAPDDSMGKIIRTVCDNS"
     gene            21489..22055
                     /locus_tag="ACJJDL_000023"
     CDS             21489..22055
                     /locus_tag="ACJJDL_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HGG7572828.1"
                     /translation="MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            22075..22965
                     /locus_tag="ACJJDL_000024"
     CDS             22075..22965
                     /locus_tag="ACJJDL_000024"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HGG7572829.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            22990..23748
                     /locus_tag="ACJJDL_000025"
     CDS             22990..23748
                     /locus_tag="ACJJDL_000025"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG7572830.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITSE
                     NRWESDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(23803..24468)
                     /locus_tag="ACJJDL_000026"
     CDS             complement(23803..24468)
                     /locus_tag="ACJJDL_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7572831.1"
                     /translation="MTVLDREQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(24668..25441)
                     /gene="folE2"
                     /locus_tag="ACJJDL_000027"
     CDS             complement(24668..25441)
                     /gene="folE2"
                     /locus_tag="ACJJDL_000027"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HGG7572832.1"
                     /translation="MNTIADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHSEALDFAQLHRLTAEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIRSLLDYDVCLTGEMKDGAYGYSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTADAEVGIEEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            25633..26790
                     /locus_tag="ACJJDL_000028"
     CDS             25633..26790
                     /locus_tag="ACJJDL_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HGG7572833.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFTLHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKATGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAIAGPMDCWLVLRGIKTLALRMEAHCKNALEIARRLEDHPAIEKVFH
                     PGLPSHEHYELAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(26853..27854)
                     /gene="hemB"
                     /locus_tag="ACJJDL_000029"
     CDS             complement(26853..27854)
                     /gene="hemB"
                     /locus_tag="ACJJDL_000029"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HGG7572834.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAEEAYNPE
                     GLVPAAVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALNEVALDIREGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAIANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(28037..28321)
                     /gene="yhbY"
                     /locus_tag="ACJJDL_000030"
     CDS             complement(28037..28321)
                     /gene="yhbY"
                     /locus_tag="ACJJDL_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HGG7572835.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            28431..29051
                     /locus_tag="ACJJDL_000031"
     CDS             28431..29051
                     /locus_tag="ACJJDL_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HGG7572836.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINDKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGSSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            29115..31082
                     /gene="ftsH"
                     /locus_tag="ACJJDL_000032"
     CDS             29115..31082
                     /gene="ftsH"
                     /locus_tag="ACJJDL_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HGG7572837.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDKSVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            31303..31734
                     /locus_tag="ACJJDL_000033"
     CDS             31303..31734
                     /locus_tag="ACJJDL_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HGG7572838.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            31727..32005
                     /locus_tag="ACJJDL_000034"
     CDS             31727..32005
                     /locus_tag="ACJJDL_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HGG7572839.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            32058..32636
                     /gene="pth"
                     /locus_tag="ACJJDL_000035"
     CDS             32058..32636
                     /gene="pth"
                     /locus_tag="ACJJDL_000035"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HGG7572840.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            32697..32903
                     /locus_tag="ACJJDL_000036"
     CDS             32697..32903
                     /locus_tag="ACJJDL_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HGG7572841.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            32900..33262
                     /locus_tag="ACJJDL_000037"
     CDS             32900..33262
                     /locus_tag="ACJJDL_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HGG7572842.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            33493..34908
                     /locus_tag="ACJJDL_000038"
     CDS             33493..34908
                     /locus_tag="ACJJDL_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HGG7572843.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            35027..35536
                     /locus_tag="ACJJDL_000039"
     CDS             35027..35536
                     /locus_tag="ACJJDL_000039"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7572844.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKNGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            35703..37085
                     /locus_tag="ACJJDL_000040"
     CDS             35703..37085
                     /locus_tag="ACJJDL_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HGG7572845.1"
                     /translation="MASIARDIFKAYDIRGIVGKTLTDEAAYLIGKAIAAKAAEKGIT
                     RIALGRDGRLSGPELMEHIRRGFTDSGINVLNVGMVATPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLSIIEKDGFAAAGKQGSVTEKDISGEYLKHI
                     TGHIRLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGTFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSAMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(37105..37860)
                     /locus_tag="ACJJDL_000041"
     CDS             complement(37105..37860)
                     /locus_tag="ACJJDL_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG7572846.1"
                     /translation="MIKIRNIHKTFGENTILRGINLDVCKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(37870..38586)
                     /locus_tag="ACJJDL_000042"
     CDS             complement(37870..38586)
                     /locus_tag="ACJJDL_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG7572847.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(38576..39403)
                     /locus_tag="ACJJDL_000043"
     CDS             complement(38576..39403)
                     /locus_tag="ACJJDL_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7572848.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            39688..40596
                     /locus_tag="ACJJDL_000044"
     CDS             39688..40596
                     /locus_tag="ACJJDL_000044"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HGG7572849.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKTRFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLQHLSAAVSGGYYYAPSVERLQNL"
     gene            40829..44443
                     /gene="recB"
                     /locus_tag="ACJJDL_000045"
     CDS             40829..44443
                     /gene="recB"
                     /locus_tag="ACJJDL_000045"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HGG7572850.1"
                     /translation="MSAPIQAFDSLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAELGDGALSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIEYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAECRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPHRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNGGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAEISVAAMPSETPTAS
                     DGISIHNFPKGTQAGLCLHEILEDFKFGQAAAGQETLITDKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYGLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPEGNICVIDYKSNHLGADASAYTRQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
     gene            44482..44841
                     /locus_tag="ACJJDL_000046"
     CDS             44482..44841
                     /locus_tag="ACJJDL_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG7572851.1"
                     /translation="MNIKHLITTALIASAAFAAQAAPQKPLSAAQTAQHPVVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            44966..45445
                     /locus_tag="ACJJDL_000047"
     CDS             44966..45445
                     /locus_tag="ACJJDL_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HGG7572852.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTKTDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(45721..47100)
                     /gene="radA"
                     /locus_tag="ACJJDL_000048"
     CDS             complement(45721..47100)
                     /gene="radA"
                     /locus_tag="ACJJDL_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HGG7572853.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSAVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPLPEKMVAF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(47278..48342)
                     /gene="hemE"
                     /locus_tag="ACJJDL_000049"
     CDS             complement(47278..48342)
                     /gene="hemE"
                     /locus_tag="ACJJDL_000049"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HGG7572854.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTGLATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEADIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            complement(48417..49634)
                     /locus_tag="ACJJDL_000050"
     CDS             complement(48417..49634)
                     /locus_tag="ACJJDL_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HGG7572855.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            complement(49631..50905)
                     /locus_tag="ACJJDL_000051"
     CDS             complement(49631..50905)
                     /locus_tag="ACJJDL_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HGG7572856.1"
                     /translation="MPSETSSPRKENETEVHIPAAPFIVKQSGNNALATCALVLAALG
                     LGASGFLFVQGQNVLKNQELAFNQKIDKAALGESENAALLKDNLNRQAAIQSELDRLD
                     GNVKANGEQILEMQKSYRELTKGRADWLVDETETILNLAAQQLVLTGNIQTAVGVLEH
                     IDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGTALRLDRLETAVSGLPLILDG
                     VLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRLENNDAMLISPEQAYFVRENL
                     RLRLLDARTALMQRNSEVYQGDLNNAEAAVRQYFDAKSPATQSWLKELAELKALDVRM
                     TADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPANENTASEPAAASDVKTIEAP
                     SLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            complement(50980..51741)
                     /locus_tag="ACJJDL_000052"
     CDS             complement(50980..51741)
                     /locus_tag="ACJJDL_000052"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HGG7572857.1"
                     /translation="METAKPVMLIVRPSGRAAEDVETCLNAGWRAEVLSPVEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTV
                     IAPDDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            complement(51762..52181)
                     /locus_tag="ACJJDL_000053"
     CDS             complement(51762..52181)
                     /locus_tag="ACJJDL_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HGG7572858.1"
                     /translation="MKKMFLSAVLLLSAATRTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRWATMKFQNGEFMYTIWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPKTAQANFNDDDFS"
     gene            complement(52432..52752)
                     /locus_tag="ACJJDL_000054"
     CDS             complement(52432..52752)
                     /locus_tag="ACJJDL_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HGG7572859.1"
                     /translation="MNFQDYLATFSSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            complement(52775..53401)
                     /gene="upp"
                     /locus_tag="ACJJDL_000055"
     CDS             complement(52775..53401)
                     /gene="upp"
                     /locus_tag="ACJJDL_000055"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HGG7572860.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            complement(53507..53818)
                     /gene="grxD"
                     /locus_tag="ACJJDL_000056"
     CDS             complement(53507..53818)
                     /gene="grxD"
                     /locus_tag="ACJJDL_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HGG7572861.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            complement(53785..54045)
                     /locus_tag="ACJJDL_000057"
     CDS             complement(53785..54045)
                     /locus_tag="ACJJDL_000057"
                     /inference="COORDINATES: protein motif:HMM:NF015827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572862.1"
                     /translation="MAKGGRREVKKTKAAADMPCAICRTAGQQDCRGVGIFPFTTLIL
                     RDIRQILWEVSAFAYNASYLTNFVNFIKRNKRWLPSTTKLKK"
     gene            53981..54130
                     /locus_tag="ACJJDL_000058"
     CDS             53981..54130
                     /locus_tag="ACJJDL_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572863.1"
                     /translation="MAQGISAAAFVFFTSRLPPLAMQNLEAEFAMPVRNVLAGSRQQR
                     GHTYG"
     gene            complement(54167..54946)
                     /locus_tag="ACJJDL_000059"
     CDS             complement(54167..54946)
                     /locus_tag="ACJJDL_000059"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG7572864.1"
                     /translation="MHIIDSHCHLNFEGLKEHLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAASPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRTV"
     gene            complement(54951..55301)
                     /locus_tag="ACJJDL_000060"
     CDS             complement(54951..55301)
                     /locus_tag="ACJJDL_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HGG7572865.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            complement(55305..56282)
                     /locus_tag="ACJJDL_000061"
     CDS             complement(55305..56282)
                     /locus_tag="ACJJDL_000061"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HGG7572866.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPRVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRLRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            complement(56316..57446)
                     /locus_tag="ACJJDL_000062"
     CDS             complement(56316..57446)
                     /locus_tag="ACJJDL_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HGG7572867.1"
                     /translation="MFTDENMTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRAITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGDISLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            57614..58315
                     /locus_tag="ACJJDL_000063"
     CDS             57614..58315
                     /locus_tag="ACJJDL_000063"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HGG7572868.1"
                     /translation="MSLKTVAVIGAMEQEIKLLREMMENIKAVSFGRFSAYEGELVGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVIGTETAHHD
                     VDVTAFGYVWGQVPQLPARFASDGILIEAAKRAARTFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AANSAKMVAEIVKSL"
     gene            58457..60250
                     /gene="lepA"
                     /locus_tag="ACJJDL_000064"
     CDS             58457..60250
                     /gene="lepA"
                     /locus_tag="ACJJDL_000064"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HGG7572869.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKNGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            60395..61414
                     /gene="lepB"
                     /locus_tag="ACJJDL_000065"
     CDS             60395..61414
                     /gene="lepB"
                     /locus_tag="ACJJDL_000065"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HGG7572870.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFAAVFLIFVVLCGTAWAVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHNTDMFRSDLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRS
                     GTAIR"
     gene            complement(61633..61782)
                     /locus_tag="ACJJDL_000066"
     CDS             complement(61633..61782)
                     /locus_tag="ACJJDL_000066"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572871.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(61828..62733)
                     /locus_tag="ACJJDL_000067"
     CDS             complement(61828..62733)
                     /locus_tag="ACJJDL_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7572872.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGPYAI
                     AFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFNERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFA
                     SGLVSGLMLALSMVFVRKTHEIEPVALFPSMMILSLGGAVSLVVPALLMDGGVLYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
BASE COUNT        14898 a        17334 c        15725 g        14928 t
ORIGIN      
        1 aacttttatt aacgcatgct ctcctatggt tgccgttgtc gacatcatta ttgatttagc
       61 aggaaacagc ttgccgccct taactgcgct ttttgatata tgcttcaatg aattatctaa
      121 aatacggcca ttttccctaa tatcttccat tctaaaccaa gggattgagc cattttccca
      181 atattcttta tttgatttgg aaggggtata gccattcttc aagtcaaaca cctcccccaa
      241 cgtcttccaa accacatctt tcagacggcc tttatagcca tcagctatcc ccccccgatt
      301 tgattgtcaa aatctaaaag aaagtcgcgg taataccggt attggcgttt gcgcagggct
      361 aattcagctt ccagctcggt gaatttgtca agtattttta caattttttg ttgggtttcc
      421 aggggtggga tagggattaa taattttttc aagttactgg catttagagc aggaatacct
      481 gtaaatgtac ataaggcatg aatctcttgt tcaaattcaa gtaatatatg atagagaaaa
      541 cgaacatcca attctgttct attcttaata gtaactgcat aatttaagtt gccacgaaaa
      601 tatcttcctt cttgccacgt tattgagccg actcccgctc ctcttgttgt gatgccgata
      661 gggtcatttt cagtgttcca ttcatcaata tagccaagcg gctctttgcc actgttaata
      721 actggataac taccaatatt atttgagatt ttctgcttac ttacagcttg tcctgttttt
      781 atgatagcta tcccattttc tccacccaac ggcttccact ccaccggtgc cgtctgaatc
      841 atctcaatca attttttcgc tttgctttgc atatccatgg ttgttttccg tttctttccc
      901 gctgtggcgg gatgtggggc ggttgtgggg tgcttcggct cactctgtcc gtttgccgtt
      961 atttctgcgg gctgaagtcc gtcctgcttt caggctgcct gcaatggtgt gcaggctgct
     1021 ttttcaggta gcctgaatgg tagttatttt gtgcggtctt ttttctgttt gatctgttgc
     1081 acggctgttt tttccaacgc tttaacgctt tccagatagg cttgctccac cggcgacagg
     1141 atgcgcgctt cataggcgcg gtattcgcgt tcggctttct gctctgcctg tttgcggctg
     1201 atgctgcctg caccctgtaa tgtgccttgt ccgtacagcc cggaaaattt gtccaattcg
     1261 gctatccagt cgcgcatata catggggctt tgctcctgcg ctttgatttc cgctaggtcg
     1321 aagaaggcgg aaaccagacg gttcaggcgg aacagttcgt cttcggtcag atagtttttg
     1381 gcgattttgg cttcattcag cgtggggatt gcgccttgaa aggtggtcag ccccataaag
     1441 tctttgctgc tgtcggcacg gctgtatatc agctcagctg cggtttgccg gctggcggca
     1501 tagtgcagtt tgttttgaac ggcggcaaaa aaggtttggc tttcgctgct tttggggttg
     1561 tagtcttggc tggtggcata taaatcaagc acttgccggt atagggcttt ttcgctgctg
     1621 cggatgtcgc gaatgcggtt gagcagttct ttccaatagt cgccgccgcc tgtgcctttc
     1681 aggcgttcgt cgtctatggc aaagcctttg gtcagatatt cgtccagccg ttcggttgcc
     1741 cattggcgga attggatgcc ccgcgcggaa cggacgcggt agccgacggc aataatcatg
     1801 ggcagggaat aatgggcgat tttgcggttt accttgcgcc cgttttcatt ttgaactgtc
     1861 aactggaagt tgacagttgc cttctcttcc aattcttgct ctgcaagaat ggttttaatg
     1921 tgtttgctga tattttgttt ggtggtttgg tacagttctg ccatgtccgc ctgcgtcagc
     1981 caaagctgtc cgccaaattc ctgcaaggca aattgggcag tgccgtcgtt ggcggtgtat
     2041 aggatgatgc tcatgcttca atctctgcaa tcacttcgtc aatttcacgc cgcagccgtt
     2101 cgattttggc aacggtttcg ctgatttcgg cgttaagctg tttgatgtcg ataatttcgc
     2161 gggtgtcttc gggttcaaca tagctgctga cggcgaggtt gtagccgttg tctttgacgg
     2221 tttgctgggc ggcgttttgg gcgatatgcg gcacatcggc tttatcggcg aagagtttga
     2281 cgatttcggc aatgtgttct tcggttaaga cgttgttgtt ggtttctttt ttaaagaagc
     2341 cgcctgcgtc gatgaattgg atgtcggtat tgtctttgtg tttggacaaa accagtatat
     2401 tgacggcgat gccggtgccg taaaagagat tgggcgcaag ggcgatgacg gtttccacgt
     2461 agttgccctc caccagatat tggcggattt tctgctctgc gccgccgcga tagaaaatgc
     2521 cggggaatga gacgatggcg gcgcggcctc tgccggaaag gtagttcagt gcgtgcagaa
     2581 tgaaggcaaa atcggctttg gatttcgggg cgagtacgcc tgcaggggca aagcggtcgt
     2641 cgttgattaa ggtggggtcg ccgctgccta tccagttgat ggaatagggc ggattggaaa
     2701 cgacggcatc aaagggtttg ctgtctttga gtttgggatt ggtcagtgtg tcgcccaatt
     2761 cgatgtggaa tttgttgtaa ttgacgttgt gcagaaacat attcatgcgg gcgaggttgt
     2821 aggtggtgtg gttgatttcc tgcccgaaga agccttcttc gatgatgtgc tcgtcaaact
     2881 gttttttcgc ctgcaagagc aggctgcccg agccgcaagc tgggtcgtag attttgttta
     2941 ctttctcctg cccgtgcacc gccagccgcg caatcagctt ggatacgctt tgcggggtga
     3001 aaaattcgcc gccggatttg cctgcgttgg cagcgtagtt ggaaatcagg tattcgtagg
     3061 catcgccgaa aaggtcgatg tggtggtctt caaaactgcc gaaatcgagt tccgccacgc
     3121 cttttaggac ggcggcaagg cgtttgttct tgtcggcaac ggtgctgccg agccggctgc
     3181 tggtggtgtc gaagtcgtca aacaggcctt taatgtcttg ttcggacgga tagccggagg
     3241 cggagctttc aatcgcggta aaaatttctt tcagcttggt gttgagctct tcgttttgat
     3301 gggcttcggc ggcaatattg caaaaaagct ggccggggta gatgaaatag cctttgactt
     3361 tgacggcatc gtctttgatt tcgggcgtga tgatgctgtc cggcatagcg gcgtaatcaa
     3421 tactgctgtc gcctgcctgc atatagtcgg taaagttttc gctgataaag cggtagaaaa
     3481 gtgtgccgag aacgtattgt ttaaagtccc agccgtccac cgcgccgcgt acttcgtcgg
     3541 caattttcca aatttggcgg tgcagttggg cgcgttgttg catttcggtc atcatcgaaa
     3601 tccatataaa agttaaacaa atcgaaatcg cctgatattt tcagacgatt ttttacgggc
     3661 attcaaatta agccaaattt tccagcatcc atttgacgta gcgctcgacg cctgatttga
     3721 catcgaaaaa ttcttccgta taacctgcct cacgcaattt ggtgatgtcg gcttgagtga
     3781 agctttggta tttgcctttg agcgcatcgg gaaatgggat gtagcggata agttcttctt
     3841 ctaccagctc tttcaagctc atttcgggtt tgccttcggc ggcgcggcag gcgttgacgg
     3901 tggcggcggc gagttcgttg aactgttggc tgcggccggt gccgaggttg tagatgccgg
     3961 aaagttcggg atggtcgaag aagtagaggt tgactttggc aacgtcttcg acgctgacaa
     4021 agtcgcgggt ttgttcgccg ttgccgtagc cgtcgttgct gccgaacagg ttgacgtaac
     4081 cgtgttcgcg gtattggtgg aaatggtgga aggcgacgga tgccatacgg cctttgtgtt
     4141 gttcgtgttg tccgtacacg ttgaagtagc ggaagccgac gacttgggcg gtcaagcctt
     4201 ctttcatgcg gcggcgcaat acttggtcaa acaggaattt ggaatagccg tacacattga
     4261 gcggtttttc gagttcgcgc tcttcacgga agatttcgcc tttaccatac acggcggcac
     4321 tggaggcata aaggaaggga atgcgttcgt cctgacacca gtccaacaaa tccagcgtgt
     4381 actggtagtt gttttccatc atatacaaac cgtcgtgatt catggtgtcg gaacacgcgc
     4441 cttgatggaa aacggcttcg atgttttgat aaggtaaaat gtgttccctc acttggcgga
     4501 tgaattcatg tttgtcgaga taatgggcga tttcgcactc ggcaaggttt ttgaattttt
     4561 cgcctttgct caaattatcg acggcaacaa tgtcagtaat accgcgttga ttaagtgctt
     4621 tgacgatgtt gctgccgata aagccggccg cgcctgttac gatgatggtc atattcggtt
     4681 tcctttgttt tgagtaaaat taataaactt agttacaaga aatcatcgat attgtcctga
     4741 aacacaaatt tgcgatgata ttccaaatat ttttctcttc cttcgggata tattctcatc
     4801 ttaatttttt gcatttggat tgatattaag tttttcccat gtgtaacggc ttagtcgagt
     4861 accgcaaatc aaacgaccat catccaagaa agtaatataa ccttgatcga acaaccaatc
     4921 ataagtcggc gttaaagcta acccatttaa ataatctaat gcctctttct catttttctc
     4981 agtaatacaa accatataag gtttaatatg actagccctt aacaaaatct catctgtaat
     5041 taatgtaaat ggacattgcg gcatatgatt tataacatcc ttgcgatatt tctgctgccc
     5101 ttttctactt ttctgtttaa tgatttcttg ctctacgaat tgattaaatt ctgaagccgg
     5161 tatttctaat ttttctcttg ataagagttg cgggtgcacg atagagcaaa attgataatc
     5221 caaaaatatt cggaaataaa ataatggttc tgaatcttct atatctttga caggcaatag
     5281 tttaagaatt gataaataac taattttggg caatacaatc ttacgccaaa ttgaccatat
     5341 atcatcctcc gaacggatat aacccctacg gtaaccttta gaattttcca aatggtctga
     5401 tacatcatgg attgaaaaga aaatattttc tgtaggcaga ttattaatac ttaaaacgta
     5461 atcatcataa aaccttgaaa tatcatgatg atatttctgt tcttgtttgt gatattcaac
     5521 ttttgcatca accaaataac gctgtaaatt tttcttatta aaaaaacaat ttttctgaat
     5581 gaaaggatat tctaccctcc ttccattttt tgtctcagta atcccccaat tttcatactc
     5641 aaaaaatgta cttagttttc gaccactatc atcaatataa ctacctacat atttgcgtgc
     5701 ttccccatta ccaccaaaaa cagataactt gttattcctg tgaataaaac tatcttccgc
     5761 acgtaaattt tgaatactat cgacaataaa atactctatg ttttcaatag taattctttg
     5821 aaaatccggc attttactct ccataaagcg taatatccat ttgttttaat atagcgatta
     5881 atacatcaac aacaatactg tttcccgctt ggcgatacat ttgagtatca ctaactaaaa
     5941 ttttaaaatc atctctaaaa cccattagcc gcaaacattc cctaggtgtt aatttacgaa
     6001 tacgtccacg attatgagta acataattat caaccccggc acgatgcatt ttatgcatag
     6061 tttgcaataa tgggcgagct acaggcaaat cagtttccgt actggtttta aaattttttg
     6121 ttcctcctgc caaaacataa tttttgattt tttcagaaag ataatatttt tcctcaacgt
     6181 tatttacatc aaaaataaag tcatcaaatt cagattcgcg ggctgcctga aaaataaaat
     6241 caccatgcca attaaattgt tgatttgctt tttggcataa ggcaatttct ccattaatct
     6301 gtgtataacg tttttgtcta tttttagaac tggtaacaaa tttcacaccc ttttcacgta
     6361 aaaaatattt gctatcagta tagtcctcca aaaaatcttg catagtatgt tctaattcaa
     6421 tcttttcagg aaactgaaaa ccatttatag gaggggtatg aaagccaaca acaaaaatac
     6481 gctcacgatg ttgaggaatc ccataatcct tactattcat tatttggaaa tataagtcat
     6541 aaccaagtga ataaaaaaca ctttttacaa ctttccaagt ttttccatta tcatgattga
     6601 gcaagccctt tacattttca taaataaata tctttggttg gacttcatcc acaacgcgag
     6661 caaattcata gaataatgtt cctcgtgtat cttctaatcc tgcacgtttg ccaaccatgg
     6721 aaaatgcttg gcaaggactg cctccaacta aaatatcaac ttgatttcta aactttctcg
     6781 catcaaattg agtaatgtcg ttatgccaaa aatcttcatt taatttatag tttccaagat
     6841 aacttttttt aacgtatgga tcaatatctc ctgcaaaaac aatggtatgg tttaaattta
     6901 atcggtggaa tgcctgttca accgcaccaa tcccgctgaa tacggttgct aatctaatat
     6961 gtgaatcagg tttaagaaaa gttttagatt tccaaccttg ttgactggga aagagcaaag
     7021 ttttttgtaa tcgagtatcg tgtgtctgtg ccattgtcga aatagtcata cttatatcgt
     7081 tctgtttatc ttatcaatat gaaaactaca ttgttgattg ccctgacaat gccttgatca
     7141 attcggcaaa cgagcaaacc gccgtaccga gtttcgccac gacaaccccg gccgcagtat
     7201 tggcaaggta catggcttcg ggcatggtgc agcctgccgc caaacccaag cccattccgg
     7261 caatgacggt gtcgcccgca ccggatacgt cgtaaacttc ttgggcgcgg gtgggctggt
     7321 aaatcggttc gccttcgctg aacaaggtca tgccttcttc gcttcgggtc agtaaaacgg
     7381 cggtcaggtc gaggtggcgg cgcaggtttt gcgctttttc ggtcagctcg ctttcgtttt
     7441 tccaactgcc gaccacttct ttcaattcgg cgcggttagg cgtaatcaga gttgcaccga
     7501 catatttttc gtaatcgtcg cctttggggt cgattaagac ggttttgccg gcgtgtttcg
     7561 cccaatcgat catatcggag atatgcgaca ggccgccttt gccgtagtct gaaaaaatga
     7621 ttgcgtcgta ttcgggcaag atttcgcggt atttctgctt gatttgttcc aacacttcgc
     7681 agttgggatg ttcttcaaaa tcaagacgga taagctgctg gttgcgggcg acgacgcgca
     7741 gtttgacggt ggtggcgatt tgtttgtcgc gcatcagata ggaggcgacg ccgtcctgca
     7801 ccatcagcgc atcgagcgcg tcggcggctt cgtcgttgcc ggttacggac aacagccctg
     7861 ccctgccgcc caacgaagcg atgttgcgcg cgacatttgc cgctccgccc gcgcgttggt
     7921 cgattcgtcc gattttcgcc accggcacgg gggcttcggg cgaaatacgg gacacatcgc
     7981 cgaaccaata gcggtcgagc atcacgtcgc cgacaaccag gactttggct tgcgcgaaac
     8041 gggatttgag ggtttcttgt tggaacttga cggacatatt gcctccgttg tattttttca
     8101 gacggcctca gcctgtaagg ccgtctgaaa atcagtttgc ttcaaggttt gccacgcggt
     8161 tcacttcgcg caatacggct accggatcgg cagcttgggt tacaggacga cccattacca
     8221 aataagtcga agcggcagcc aaggcttcgg ccggtgtcat gatgcggcgc tggtcatcat
     8281 tattgccggc aacgtccaag cggatgccgg gcgtgaccaa gacaaaatct tgtcccaact
     8341 cgcggcgcag cggtgcggct tcttgggcgg aacagaccac gccgtccaag cccgaacttt
     8401 gcgccagttt tgccaagcgg atgacttgtt cttcaggggc ggtgttcaaa ccgatttccg
     8461 ccaaatcgct ttgttccatg ctggtcaaca cggttacgcc gattaagagc ggctttgtac
     8521 cgtatccggc aacggcttct gctgcggctt ccatcatacg gcggccgccc gatgcgtgca
     8581 tatcgaccat ccaaacgccc atatcggcag cgactttgca ggcttgcgcg acggtgtggg
     8641 gaatatcgtg gtatttcaaa tcgaggaaaa gtttgaaacc ttgattgatt aagctttctg
     8701 ccaaattgcg tcccgtcgcg gtaaacagct ctttgccgat tttgatttga cacaatgtcg
     8761 ggtcaaggtt gcggacgaat ccgagcgtgt ctttttcgtt ggaaaaatca agggcgacga
     8821 tgacgggggt gcgttgttgc ggagtttgga agtcggagat taaaggattc atggtgtttt
     8881 cgtttcgggt tttcagacga cctttatcgt ctttttcgca gtatagtgga ttaactttaa
     8941 accggtacgg cgttgtctcg ccttagttca aagagaacgc ttctctaagg tgctgaagca
     9001 caaagtgaat cggttccgta ctgtttgtac tgcctgcggc ttcgtcgcct tgtcctgatt
     9061 tttgttaatc cactataaca acgtaaattc aaaccgtagg tcgggcattg atgtccgacc
     9121 tacgcggact caagcctccg acaaactgtt tcggataaat ttgaaccggt acatcagccg
     9181 tcattcccgc gcaggcggga atccattgat aaaactcagt tcatcagatt taaacagcga
     9241 ttgcccaaat tcagaaatgg attcccgcct gcgcgggaat gacgccaaat gattattttt
     9301 cggttgcaac acgctgttta tcaaaaacag gtcgtctgaa aacctgattt tctgttttca
     9361 gagtgcgaag cctgcccgtg ggtacgacct tttcgattta tttgcccaat gcgcccaata
     9421 cttcggcttt cacggcttct accggctgag tgccgtcaac tttgatgtat ttaggcgcgt
     9481 gttcgccttc cagtttgctg taaaaatcga ccaaaacttc ggtttgctcg tggtaaacgg
     9541 caaggcgttt tttcacggtt tcttctttgt cgtcgtcgcg ctgaatcaaa tcttcgccgg
     9601 ttacgtcgtc tttgccttca actttgggcg ggttgtaggt aacgtggtaa gtacggccgg
     9661 aagccaaatg cacgcggcgg ccgctcatgc ggtcgacaat cacgctgtca ggcacatcga
     9721 tttcaacgac tgcatccaaa tccacgcctg cttcaaccat cgcttcggct tgtgccaatg
     9781 tgcgcgggaa accgtcaaac aggaaaccgt ttttgcagtc gtcttgcgcg atgcgttctt
     9841 tgaccatgcc gataatgatg tcgtcgcgca ccaagccgcc ttcgtcaatg atttttttcg
     9901 cttccaaacc caagggcgtg cctgccttaa tcgcggcacg gagcatgtcg ccggtagaga
     9961 tttgcggaat gccgaacgct gcggtgatga attgcgcctg agtgcctttg cccgcgcccg
    10021 gtgcgcctaa aagtaatgct ttcatgaagt gatcctttta aatgtgttta ttggaatcaa
    10081 acagatggtt tacgattcta cacggcttgg cacaatagtt caaaaaccaa ctgcacaaac
    10141 tgccatttgc aagcaaatgt tttgcatacc tttgccgagc ctgatattca caaggcggca
    10201 actttttggg acaatcccca aaatttcaaa acatcacacc ctaccaaaaa ggaacatccg
    10261 tgaaacgcat ttttctgttt ttggctacca atatcgctgt tttggtcgta atcaacattg
    10321 ttttggcggt tctgggcatc aacagccggg gcggcgcggg cagcctgttg gcgtattccg
    10381 ccgtcgtcgg cttcagcggc tcgattattt cgctgctgat gtccaaattc atcgccaaac
    10441 aatcggtcgg tgcggaagtc atcgacacgc cgcgcaccga agaagaagcc tggcttttga
    10501 acactgtcga agcccaagcg cggcaatgga acctgaaaac gcccgaagtc gccatctacc
    10561 actcccccga acccaatgcc tttgccacgg gcgcatcgag aaacagctcc ctgatcgccg
    10621 tcagcaccgg tttgctcgac catatgacgc gtgacgaagt ggaagccgta ttggcgcacg
    10681 aaatggcaca cgtcggcaac ggcgatatgg ttacgctgac gctgattcaa ggcgtggtca
    10741 atacctttgt cgtgttcctg tcgcgcatta ttgccaacct gattgcccga aacaacgacg
    10801 gcagccagtc ccagggaact tatttcctgg tcagcatggt attccaaatc ctgttcggct
    10861 tccttgccag cttaattgtc atgtggttca gccgacaacg cgaataccgc gccgacgcgg
    10921 gcgcggcaaa actggtcggc gcgccgaaaa tgatttccgc cctgcaaagg cttaaaggca
    10981 acccggtcga tttgcccgaa gaaatgaacg caatgggcat cgccggagat acgcgcgact
    11041 ccctgctcag cacccaccct tcgctggaca accgaatcgc ccgcctcaaa tcgctttaaa
    11101 ccgatttgaa acggcaaaaa ccgtacgcgc aagcagtacg gttttttgta tatgctgtct
    11161 gaaaacatca ggtttccata ccgacaccaa ccgtatccat ttccgcaccg gatacgccgc
    11221 attgatatac cctgataaac cgtatccgga cagaaaatat agtggattaa caaaaaccag
    11281 tacggcgttg cctcgcctta gctcaaagaa aacgattctc taaggtgctg aagcaccaag
    11341 tgaatcggtt ccgtactatt tatactgtct gcggcttcgt cgccttgtcc tgatttttgt
    11401 taatccccta tatcagataa aacagcggta aaattgccgt ctgaaaccaa ctctgcgcca
    11461 tacgggacac gctctgcacg tctatttgcc tccgatatat cctccctact gtaggaacgt
    11521 ctgccgattt gcacgaaatc ggcacctcta gcacccttca ggatggcgga cgttatccgt
    11581 tcttgggatt ctgcaagacg gtcgacggca ttatacagac gctcggtctg atacccttcc
    11641 gaagcaacct gcttcaggta ttccaaataa ccgtaaccca acgcccctcc gacaagcagg
    11701 gtcgtcaacg ctaccagcgt tgccgaacgg attttagggg gcatatcttg aagcatatct
    11761 ctaccgaacc gaaccaaagt ctctttaaag tcggactcta cacgcgtaga accctcggaa
    11821 atcttgaagt tcaactcata ctgcttccgt ttgtccgctg tcaaccgctt gaggttgtca
    11881 tccccgtatt ggacggttga cacaaccctg tacagactgt cctgtatttc gaccagcgtc
    11941 tgtgcaaagt tggcggtcat aactggattc ccaacccttg ccgccgattc tgatactcaa
    12001 aacggtatcc aggcgttcca gcagggcttc gggagacagc agtgcgtatt cttcaatatt
    12061 ttccataggt tgattatagc agaaccttat acctgttaca gacaaggttg tcgggatttg
    12121 aacgtccgtc gagcttggtt cgtatagagc cgtagggggt gtttagggct ttggcggcag
    12181 cttgtacgct ggggaacgtg agtgtttcgc ctgtggcggt gtcgaggatg gagacaggtt
    12241 tttggttttg gggaggcgta ttttccttca ttttaagttt cccgcactcc ggacacccat
    12301 actttgactt tatagctgtg tcgtaataca aaagttggac aaccccgtgc gtaggacatc
    12361 taacactgga aggtttataa atgccactga actccaacaa ttctaaatgt ggaaatttct
    12421 cttgaaagcg tgatttggcg gtatcgaaag tcattcgctt acccataatt tgtctccata
    12481 ggttatgtgc aaatggatta cacaaccaaa atatagaaat tttcaaattt tttgagacct
    12541 acctgaaatc ctgcgcaagc acaatgtaaa gaaaaatggt atacgtcttt actaaatctt
    12601 tacataaatt aactctaatc gggatttgaa cgtccgtcga gcttggttcg taggatttag
    12661 ggggttgtga accttaccta tcgtacccaa gcactttgta cctgtttgaa ataaggttgt
    12721 cgggcgacgt tcgacccttg agcctgtgat tgatttgttg gaaatgtaca cctaaagcag
    12781 cacctgcggc agtaacgctt gggaacgtga gtgtttcgtt ggtcgttgtg tcgaggatga
    12841 ggaggggctt ccctacattt ggaggtgttt gggtttttga catcttagca cactcaggac
    12901 acccgtactt tgactttata agggcattaa atgtcgaata acgaacgttc ccgtgcatag
    12961 gacaattaac ggttactggg taattcacac cgtcaaagcc ggttagagag atattaggga
    13021 atatatcagt aagttcagaa gctgcttggt tgaaagattt ggccatttga gactccaaaa
    13081 ttgattgtca aatggattta atagcaaatt tataaaaatg tcaaattttt cgagaagcac
    13141 ctgatagtgg cgaggggtat acactgttaa aaagtgtata cgtcatttag tgcagatgtg
    13201 aaccttatac ctccctgcaa gtaaagtctc tgtgtgaacc cgacctttta tacggtcagt
    13261 gatagctgct gggtttatac ccaatgacct tgcagcagat gctcttgagg ggaatgtaag
    13321 tgtttcgcca gttacagtat cctccaatac tgtattttta gataatttat ctattgtatc
    13381 ttctggaatt ttgtgggaat tgacaccata agatgcacat tttggacacc cacttttaga
    13441 gtccaacata cttttgaatg tagagcaagt aaccctcccg tgtataggac agacgattac
    13501 cgtcgggtaa cgaacgccat tgaactccac aagattcaaa tgtggaaatt tagaggttag
    13561 cttagaaact gcttgagtaa atgtaagtgc catagtggtt gtgaacttac tttaccaacc
    13621 tataacgata cctaatcaat cggtcaaacg gagtgcgtcc gcttaaacgt acagctaaag
    13681 tgctgttgga gcaaccgata aatttactgg cagccagtgt acttgcaaac tcgtagattt
    13741 cccctgtctc tgtgtcctcc aacctaatgg caacggcgtt tggagagggc ttttcgggat
    13801 ttcgagtaca ttcaggacat cctgttgagg atttcatggc agcttgtaga ttcccgtaaa
    13861 caaccgaccc atgcaaaggg cattggattg ttaccggttc gtagttttta gtgaacttca
    13921 aaaccgtctt atcaggaaat ttactggaaa accttaactg aacatcttgt agcgagagtg
    13981 attttggcat tatagacctt tttaaaatga aagcattata caaccaaaat atagaaattt
    14041 tcaaattttc tctgaacgca ctggtatccg atggagctaa atgtaaagaa aaagggtata
    14101 cgtctttact aaatatttac acattttaac tgtatagtgt ttgacaaaca acaggcatag
    14161 gcgcataatg cacccgtagt tagatagata gatagtaagg agataaccaa tgacttagca
    14221 cctgccccct ctctctcgcg caccccgccc ctcgcttgcg gctaatgggc tttgcgcgac
    14281 atatacactt tcatctcctg catggcttaa ccgcctatgc aatagtacac acatcaacaa
    14341 atcaggctgg cacgtcttgg cattggctga cgtaccattg tagcccgaaa tgttgatacc
    14401 ctactattta tgaccaacgg cggattaggg cttcagacgg caattttact gcaaaacctt
    14461 atgcgaacgg atgatgcagc acaatcgttt cttctcggtc ggggccggtg gagacgatgg
    14521 cgaccggcgc gccgcagact tcttcaatcc gtttcaaata tgctttggcg ttttcgggca
    14581 atgcgccgta gtccttcacg ccgaaagtgg attcacgcca gccgggcatg gtttcgtaaa
    14641 tcggcttgca ggcttctacc gcatcagagc cgcaaggcag gatgtcggtt ttgccgccgt
    14701 cgggcagttc gtagccgacg cagatattga tggtttcaac gccgtccatt acatcgagtt
    14761 tggtaatgca cataccggaa atgccgttga tttggatgga gcgtttcagg gcggcggcat
    14821 caaaccagcc gcagcggcgc gcacgaccgg ttacagaacc gaattcgtgt ccgcgctccg
    14881 ccaaacctgc gcctacttcg tcgaacaatt cggtcgggaa cgggcccgaa ccgacgcgcg
    14941 tggtataggc tttgacgatg cccaaaacat aatccagcat ttgagggcct acgcccgcgc
    15001 ctgccgaagc cgcgccggcg aggcagttgg acgaggtaac gaagggataa gtgccgtagt
    15061 cgatgtccaa caacgcacct tgcgcgcctt caaacagcag tttttcgccg tttttgtttt
    15121 tctcgttcaa cacgcgggac acgtcggtaa tcatcggcgc aatgcgcggc gcgacttttt
    15181 cgataaccgc catcacgtct tccgctttaa ccggttcggc attgtgcaga tgttgcagtt
    15241 ggacgttgta ataagcaagg acgacatcca gtttttcacg cagtttttca ggatgcagca
    15301 aatcggcggc gcgaatggcg cggcgtgcca ctttgtcttc gtaggcaggg ccgatgccgc
    15361 ggccggtcgt gccgattttg cctttgccgc gcgatgcttc gcgggcttgg tcgagcgcga
    15421 tgtgataagg caggatcagc gggcaggtcg gcgcgatttt cagacggcct tcgacgtttt
    15481 tcacgcctgc cgcgttcaac tcgtcgattt cgcccaacag ggcttcgggg gagacgacaa
    15541 cgcccgaacc gatgaagcag tccaaacttt catgcaggat gccgctcgga atcaggcgca
    15601 aaatggtttt tttgccgccg acaaccaagg tatggcccgc attgtggccg ccttggaagc
    15661 gcaccacgcc gccggcttct tccgccagcc agtcaacgat tttaccttta ccctcgtcgc
    15721 cccactgtgc gccgattact acaacatttt tagccatagc catataacct atcgatatta
    15781 aaaattattg cggaaatccc caaaccggtg cggctttgcg ccccgccacg atttgccttt
    15841 catccgccat gaacgggtat ttagcgtttc acgacctgcc aaacgccgtc cgtctttttc
    15901 agacggcctg caagctcttc cgaaacattg tgtccgatac cgtagtcaat cacgacacac
    15961 tgcccttgtt cacgcaaggc ttcgactgct tcgcgcgccg cttcggcatc ttccgcatcg
    16021 accaacacgg cgggctgccg ttcgatggtg ggcaaacgcc cgataaagct gcgcaagtcg
    16081 aaactgaatc ccgttgccgg gcgcgccctg ccgaaatatc cgcccaatcc gtcataacgc
    16141 ccgccgcgcg cgaccgcgtc gtggaaatcg gcggcatagg cggcatacag caagcccgtg
    16201 tggtaattgt cgacacgcag ctcggacaag tcgatatgga tttcacaatc ggggaatgcg
    16261 tcgcacaccg cctgcaattc gcccaacgcg ccgccgaccg ccgacaaatc cggcaaccgt
    16321 ccgcgcgcgt cggacaacac ttcacgcccg ccgtacaggc gcggcagcag cgagaatgct
    16381 tttgcccaca taccgtccag cttccaagcc ttgacctgcg cttcgaccgt ctcggtatct
    16441 ttatcctgca tcaaggcaag cagcgttgca gactgccccg catccaaatg cgccgcatcg
    16501 gacaaggcgc gaaatatgcc gatatgcccc agcgaaagca gcactttgcc catatcggca
    16561 attttcatgc ttttcagcat caggtctatc agctcgatgt cgccacggat gtcggcaaaa
    16621 ccgtacattt ccgcccctgc ctgcaagggt tcgcgcatat tcagcagacc gtcggactgc
    16681 gcgtgcaaca ccggaccggc ataacacaac cggttaatcc cttggttggc ggataaaaga
    16741 tgggcatcga tacgcgccac ctgcggcgtg atgtcggcgc gtatgcccaa ctgcctgccg
    16801 ctgagcctgt ccgttaccaa aatggttttc agggaaagcc ccgcatcgat atgcgtcagc
    16861 agggaatgtg cgtactccat cagcggaggc tgtaccagtt cataaccgtg tacgcggaac
    16921 agtgccaaca actgctccct cgcgctttca agctgccgcg cgttcgtggg cagtacgtcg
    16981 gcgatatgtt ccggaagctg ccatgtctgc atgagaatct gccttctatt ttatcatgta
    17041 aatacaaaag gctgcccgat ccgcaatcag acggcatctt tgccgcaacg catcacgccg
    17101 ctgtcaaaac ggcgatgctt ccttccgatt cagaatccga acagcccctg tccgacggct
    17161 caatgccgtc aagtcgttaa aaccaaactt taccataaaa tacacacaat ctgaatatac
    17221 ttttataccc tgtatccgcc gtctgacggc acggcatttt tttactatat aatgtgcgcc
    17281 attatttctc atcacttcct gctgccgttt tctgcttcag acggcatttt tgttgattga
    17341 acacttatgc tgctcgacct caaccgcttt tccttttccg tcttcctgaa agaagtccgc
    17401 ctgctgaccg ctcttgccct gcccatgctg ttggcgcagg tcgcgcaggt gggcatcggt
    17461 tttgtcgata ccgtgatggc gggcggtgcg ggcaaggaag acttggcggc ggtggctttg
    17521 ggcagcagcg cgtttgccac ggtttatatt acctttatgg gcattatggc ggcgctgaac
    17581 ccgatgattg cccagcttta cggcgcgggt aaaaccgacg aagtgggcga aacgggacgg
    17641 caggggattt ggttcgggct gtttttgggc gtgttcggca tggtcttgat gtgggcggcg
    17701 attacgccgt tccgcaactg gctgaccttg agcgattatg tggaaggcac aatggcgcag
    17761 tatatgctgt tcaccagctt ggcgatgccg gcggcaatgg tacaccgcgc actgcacgcc
    17821 tacgcctcca gcctgaaccg cccgcgcctg attatgttgg tcagctttgc ggcgtttgtg
    17881 ttgaacgtgc cgctgaacta tattttcgtt tacggcaaat tcggtatgcc cgctttgggc
    17941 ggcgcaggct gcggactggc gacgatggcg gtgttttggt tcagcgcgct ggcattgtgg
    18001 atttatatcg ccaaggaaaa tttcttccgc ccattcggac tgacggcgaa attcggcaaa
    18061 ccggattggg cggtgttcaa acagatttgg aaaatcggcg cacccatcgg gctgtcttat
    18121 tttttggaag ccagcgcgtt ttcgtttatc gtgtttttga ttgcgccttt cggcgaggat
    18181 tatgtggcgg cgcagcaggt cggcatcagt ttgtcgggga ttctctatat gattccgcaa
    18241 agcgtcggct cggcggggac ggtgcgcatc ggcttttcgc ttgggcggcg cgaattttcg
    18301 cgggcgcgtt atatttcggg cgtgtcactg gtgttaggat ggatgctcgc cgtgattacc
    18361 gtgctttcct tggtattatt ccgttcgccg ctggtaagta tgtacaacaa tgatccggcg
    18421 gttttaagca tcgccgccac cgtcttactg ttcgccggct tgttccaacc ggcagacttc
    18481 acccaatgta tcgcctccta cgccttgcgc ggctacaaag ttacaaaggt gccgatgttc
    18541 atccacgccg ccgccttttg gggctgcggt ctgctgccgg gctacctgct cgcctaccgt
    18601 ttcgatatgg gcatttacgg cttctggacg gcattgattg cctcgctcac catcgccgcc
    18661 atcgccttgg tgtggtgctt ggaattgtgc agtagggaga tggtcagatc gcataaggcc
    18721 gtctgaaaac tccgccgatt aaaaatatag tggattaaca aaaaccagta cggcgttacc
    18781 tcgccttgcc gtactatttg tactgtctgc ggcttcgttg ccttgtcctg atttttgtta
    18841 atccactata gaaacgatgg gctgaagccc gccactggca atactcattt taaagttcaa
    18901 acccatgcaa cccatccgat accgaaccga ccttaccccc tacaacactt tcggcctgcg
    18961 cgcccaagcc cgagccttta ttgcgcttga acacgccgac gggttgcgcg acatcgtccg
    19021 gctacccgag ttcaaccgag atactgtttt atggctgggc ggcggcagca atatcctttt
    19081 gatggaggac tacgccggtc tggtcgtaca tatggaaaac aaaggcatac gcgaaattgc
    19141 tcgttcagac ggcatggttc tgattgaagc gcaggcgggc gaaatctggc acgattttgt
    19201 cctgcacgcc gtcgcgctgg gtttgaacgg tttggaaaac ctgagcctga ttccgggtac
    19261 ggtcggcgcg tcgcccgtgc agaacatcgg cgcatacggc gtagaggcga aagatgtgat
    19321 tcacagcgtg cgctgcttcg atttggatac ggaaaccttt gtaacccttt ccaatgccga
    19381 ctgccgcttc gcctaccgcg aaagcctgtt caagcaggaa ggtaaagggc gttatgtgat
    19441 tgtttcggtc gtatttgcat taaaaacgca ttttgtgccg aacttgggtt acggcgattt
    19501 ggcggccgcc gttgccgaac tgagcgcggg cagggtgccg acggcgaaag atgtttccga
    19561 tgcagtgtgt gcaatccgca acagtaaact tcctaatcct aacgtgcttg gtaatgtcgg
    19621 cagtttcttt aaaaatcccg tcatcggcgc ggaaaaagct gccgccctgt tggagcagca
    19681 tcccgatatg ccgcattatc cgcagccgga cggttcggtc aaactcgccg ccggctggct
    19741 gatcgaccaa tgtcgtctga aaggcttcca aatcggcggc gcggcggtac acgacaaaca
    19801 ggcattggtt ttggtaaaca aaaacaacgc ctcggcaaac gatgtccggc agttggcgca
    19861 acacatcaaa tttacagtat ttgctcggtt tcaggtagaa ttgcacgccg aacccaattg
    19921 gctgcctgct tcgttcagcc tgtaaatcca aggagtatgc ccgtgacccg ccccgccaaa
    19981 atcaatactt acacacgcat catcgacgcc agccttgcgc ttttcaacga ggaaggcgag
    20041 cgcaacatca gtaccaacca tatcgcggcg catttgggca tcagtccggg caatctctat
    20101 taccacttcc gcaacaaaga cgaaatcatc gtccaactgt tcaaacgtta cagcgaagcc
    20161 ctgcttgcct acctcaacga agccgtgttg ccgtctgatg tggaagactc catcaactat
    20221 atggcgggca tttacgacgt gatgtgggaa taccgcttcc tattcagcga cgtaaacacc
    20281 ctgcttgcac gcagtgccga attgttgggc gaacacaaca ccttcaccca agccaaagtc
    20341 tccccgctct tggtcaacct gctgacccag ctcaacggtc tgaacatcat ccaagccgac
    20401 caaaccgcta tgaacgatct cgccgtcaat atgtggatgg ttacgaaata ctggttcgac
    20461 ttcgacagct ccctgcgcgg ccgcaccaag ctgaccgaag actccaaagc acgcggcatc
    20521 cgccgcacct taagcctcct tcgtccttat cttttgcccg aacaccgcaa gaaatacgac
    20581 cggaaaatcg gcaacggcaa cccgtaaacc cacagcgtcc gaatcagcct tcagacggca
    20641 cttacccgac ggtatcagcg aatgcgcgca gtccccccgc cccatatctc catcacaggc
    20701 ctaggttacc tcggcctgcc gctggcacaa aagttttacc aacacggcag ccgcgtcgcc
    20761 gccataaaac gcagcctgac ttcggacgac atcaacctgc ccatacatct cgacaccttc
    20821 gacctcggca gcaccgatgc ctttcagacg gcattgtggc ggcaccacgc cgacaaaccc
    20881 gtctggttct tcctgctacc gccctcctcg ctgacgcatt acgccgacac cgtcaaacaa
    20941 tgggcagaac ttgcccgggc gtgcaacgtg caacacctga ttttcacaag cagcaccagc
    21001 gtttacggcg atacagcgcg cgaatgcgac gaaaccgcca cacccgatcc gcaaaccgag
    21061 tccgcccgcc aaatcctcgc cgccgaacaa cacctgctcg acagcggcat ctccaacatc
    21121 gacatcctgc ggctgggcgg gctttattgc gccgaacgcc atcccgtcag ccgccttgtt
    21181 caaaagcaaa acatcccggg cggcaaccgc cccatcaaca tcgtccaccg taatatcgcc
    21241 gtcgaaagcc tgtttcagac ggcatttaac cccggcggca ggcggctgaa aaacattatc
    21301 gaaccgcgcc acccgacacg acgcgaattc tacacggaag aagccgccaa actcggtttc
    21361 ccggctcctg atttcgcacc cgacgacagc atgggcaaaa tcatccgtac cgtttgcgat
    21421 aacagctgaa gcctgtaaaa taagcgtcaa cagcaacaaa caggcattct ccgccccgat
    21481 cagaaaatat gtccgccctc ctccccatca tcaaccgcct gattctgcaa agcccggaca
    21541 gccgctcgga acttgccgcc tttgcaggca aaacactgac cctgaacatt gccgggctga
    21601 aactggcggg acgcatcacg gaagacggtt tgctctcggc gggaaacggc tttgcagaca
    21661 ccgaaattac cttccgcaac agcgcggtac agaaaatcct ccaaggcggc gaacccgggg
    21721 cgggcgacat cgggctcgaa ggcgacctca tcctcggcat cgcggtactg tccctgctcg
    21781 gcagcctgcg ttcccgcgca tcggacgaat tggcacggat tttcggcacg caggcagaca
    21841 tcggcagccg tgccgccgac atcggacacg gcatcaaaca aatcggcagg aacatcgccg
    21901 aacaaatcgg cggattttcc cgcgaatccg agtccgcaaa catcggcaac gaagcccttg
    21961 ccgactgcct cgacgaaata agcagactgc gcgacggcgt ggaacgcctc aacgaacgcc
    22021 tcgaccggct cgaacgcgac atttggatag actaaccttc agacggcatc cgacatgaac
    22081 agcccttttc acaacatcgg catcgtaacc cgccccaaca cgcccgacat ccaagacacc
    22141 gcacacacgc tgattacctt tttgaagcag cacggcttta ccgtctatct cgacgaagtc
    22201 ggcataaagg aaggctgcat ctatacccaa gacaccgtcg gctgccatat cgtcaacaag
    22261 accgaactgg ggcaatactg cgacctggtc gccgttttag gcggagacgg cacctttctc
    22321 tccgtcgccc gcgaaatcgc cctgcgcgcc gttccgatta tcggcatcaa ccaagggcat
    22381 ttgggcttcc tgacccaaat tccccgcgaa tatatgacgg acaagctatt gcccgtttta
    22441 gaagggaaat accttgccga agagcgcatc ctgattgagg ccgcactcat ccgcgaaggc
    22501 aaaaccgccg aacgcgccat cgccctcaac gatgccgtcc tctcccgtgg cggtgccgga
    22561 cagatgattg agtttgaagt cttcgtcaat cgggaattcg tctataccca gcgttcggac
    22621 gggctgattg tctccacccc caccggatcg accgcctatt cgcttgccgc cggcggcccc
    22681 atcatgcagg caggattgca cgccttcacg ctcgtcccca tctgcccgca atccatgacc
    22741 aaccgcccca tcgccattcc agacacgtcc gaaatcgaaa tcctcgttac ccaaggcggc
    22801 gacgcgcgcg tccatttcga cggtcaaacc catatcgacg tgcaaaacct cgaccgcatc
    22861 accatccgcc gctaccgaaa ccccttacgc atcctacatc cgaccgacta ccaatatttc
    22921 aaaaccctgc gccaaaaact gcactggggc gaacaattgg tctgaaccga cccttaccgg
    22981 aaaacaccta tgaatccaaa aactcccccc gaccatacag aagatgccgt gcgcctgtcc
    23041 aaacgcatgg cgcaactggg gctttgttcg cgccgcgaag ccgacggcta tatcgaacag
    23101 ggttgggtaa cggtcaacgg caaaaccgcc gtactcggtc agaaagtttc gccggcagac
    23161 cgtatcgaac taaacaagaa agcccacgaa cagcaggcgg cacgcattac catcctgctg
    23221 aacaaacccg tcggctatgt cagcgcacaa gcggaaaaag gctataaatc cgccgccgaa
    23281 ctgattacct ctgaaaaccg ctgggaaagt gacaccagcc gcatccgttt cgatccgaaa
    23341 cacaaaatcg gtcttgcccc cgccggcagg ctcgatatcg attcagtcgg attactggtg
    23401 ttgacgcagg acggccgtat cgccaagcag cttatcggcg aaaacagcgg cagtgaaaaa
    23461 gaatatttgg tgcgcgtgcg cggaaaattg gacgaaaaag gacttgcctt actgaatcac
    23521 ggattgagtt tggacggtga gaaactgcgt cccgcccaag tagaatggca aaacgaagac
    23581 caactgcgct tcgtgttgaa acagggcaaa aagcggcaaa tccgccgtat gtgcgaactg
    23641 gtcggactgc gcgtcgtcgg gctgaaacgc atccgcatgg gtaaggtcaa gctcggcagg
    23701 ctgccgcccg gcaaatggcg ttatctcgcc cccggtgaat cgttttaaat aagcattaaa
    23761 aaatgccgtc tgaaaatcct tgcgttttca gacggcattg ccttatgccc aaataacggt
    23821 ttcttccaag ggcctgcgcg ccttcgtggc gatttcctga acgcggtaac cgaatgtcgc
    23881 ggcgacggac acgccccatt ctgccgcatc gaacaaaccg aactgcccgg acaatacgcg
    23941 ttccatatcg gcatagttga aaccttccac cgggcaggaa tcgatacctg ccatcgccgc
    24001 acccgtcatc atgttgccca acgcgatata ggtctggcgg caacaccagt caaacaaggc
    24061 gcgcgaatcg tccaaaatct tgatgtcgtc ggcttgaaac gcctgatacc tcgccaaaga
    24121 ttttgccatg gcatccggtt cggtaacgcc gcgccgtttg aggctttcca acataaacgg
    24181 gctgtcgaag cgggcatttt tctttgccaa aaacaccacc aaatgactgg cggtatccaa
    24241 agcatccgcc ataccccaag aaaacggctt gattgcctgt cggatttcgg ggttttgaac
    24301 cacaacaaac tgccaaggct ccgaaccgac cgaactgggc gacaaacgcc cgagttctaa
    24361 aataaactga aaatcctcgg cactgatttt gcgtgccgca tcgtaatgcc ggcatgattt
    24421 acggttttta aatgcggata gaacctgctc tctgtctaat accgtcatag tgcatccttt
    24481 tattactggt attgcaaatt gatttcaaac cgatacggca ctgccgcacc atacaatccg
    24541 tcctcgccat caagcttcat ccggacttta cccatctctc tacggctggg aaaacaaagc
    24601 ggcggcagac tcgggaataa cgccccaatg cctttcagac ggcatttggg catcattgca
    24661 aacgcgccta cgggtaggcg atataggcat aagccgaatg gttgtggata gactcgaaat
    24721 tctcactctc gacgacgaaa ctcttgatgc gtttgtcggc gatcagcgaa gtagcgacat
    24781 cacgcaccat atcttccacg aatttcgggt tttcgtaggc tttttcggta acatattttt
    24841 catcggggcg tttgagcaaa ccgtagagtt ggcagcttgc ctgcgcctcc acataatcaa
    24901 tgacttcctc gataccgact tctgcatcgg cagtcaggct gacggtaaca tgcgaacgct
    24961 ggttgtgcgc gccatattgg gaaatttctt tggaacacgg gcaaagcgag gttacgggaa
    25021 tcatgacctt catactgtag ccgtatgccc cgtctttcat ttcgcccgtg agacagacat
    25081 cataatccag taaggaccga ataccggaaa ccggcgcggt tttcttgcgg aaaaacggaa
    25141 aagaaacgct gattttgccg gcgcgggaat ctaaaagcgc gaccatttcg gcagtcagcc
    25201 tgtgcaattg tgcaaaatcc aaggcttcag aatgttgctc catcaatgcg acaaaacgcg
    25261 acatatgcgt ccccttctgc tcagcaggca ggtaaaccgt catggtcaga cgggcaacgg
    25321 tggactggat gccttctgca gtttgcaggg taatcggaaa gcgcaggtct ttgataccga
    25381 cctgattgat cggcagattg cgcaaatctc ggctggattg cacgtctgca atagtgttca
    25441 tgagttgttt ttccttaata ttcatgtaat tgttgagatg tgtgcatggt atggcgtttc
    25501 cgccggggaa tataccgtca atctgcaaat gcgagattat atcactcgct tttagcagct
    25561 gcattgattg tttctatttt tcagatagtg ataaaatctt cgattattca catctacata
    25621 ggcagagacc aaatgaaatt cgccacgaaa gccattcatt ccagctacga ttgcgacgaa
    25681 cacaaccgcg cgctgatgcc gccgatttat caaaacagta tgtttacgtt gcacgagatt
    25741 ggcgaaaatg tgccttaccg ttattcgcgc ctgagcaacc cgacccgtca gattttggaa
    25801 gacaccgttg ccgatttgga acacggtgcg gcaggctttg cgttttccag cggtatggcg
    25861 gggattgatg ccgtatggcg taccttcctg caaccgggcg ataccatcgt cgcggtcgcc
    25921 gatatttacg gcggcgcgta tgacttattg gtcgatgttt atcaaaaatg gggggtaaat
    25981 gttgtttttg ccgatttagg caatcccgac aatttggacg aattgctcaa agcgcacaag
    26041 gtcaaactgg tttggctgga aacgccgtcc aatccgcttt tacgcttggt agacatcaaa
    26101 gcccttgccg caaaagccaa agcgaccggc gcgctggtcg gcatcgacaa cacctttgcc
    26161 acgccgtatc tgcaacagcc gttggatatg ggttgcgatt ttgtgttcca ttccgctacc
    26221 aaatatttgt gcggccattc cgacgtattg atgggcatcg tcgttgccaa aaccaaagag
    26281 ctggctcagc ctttgcacga tatgatggtg cataccggtg cgattgcagg cccaatggac
    26341 tgctggctgg tgttgcgcgg catcaaaacg cttgccctgc gtatggaggc acactgcaaa
    26401 aacgcactcg aaatcgcgcg ccgtctggaa gaccatcctg ccattgaaaa agtgttccat
    26461 cccggcctgc cgtcgcacga acattatgaa ctcgcccaag cgcaaatgcc taaaggcatc
    26521 ggcggcgtgg tgacggttta tctcaaaaac gacacgcgcg aagcggcaaa cagcgtgatt
    26581 aaaaacatga aactggtcaa aatggcttcc agcctcggcg gcgtggaaag tttggtcaac
    26641 cattgctatt cccagtccca cagcggcgtg ccgcataatg tgaaaatgga aatgggcatc
    26701 aaagtcggcc tgctgcgttt ctccatcggc atcgaagacg cggacgatat ttggaacgat
    26761 atttccgccg cactcgatac gactttgtaa actgtaaaaa tgccgtctga aaccatggtt
    26821 tcagacggca tttcaattaa cccggccgaa aatcaacgct tcaacatctt tgccgcctca
    26881 atagcgtaat aggtcaaaat cccgtccgca cccgcacgtt tgaatgccag caggctttcc
    26941 aaaaccactt tgccgccgtc cagccagccg ttggcaatcg ctgcctgcaa catcgcgtat
    27001 tctcccgaaa cctgataggc ataagtcggt acgccgaact cgtccttcac gcggcggaca
    27061 acgtccaaat acggtaaacc gggcttcacc atcaccatat ccgcaccttc ccgaatatcg
    27121 agcgccactt cattcagcgc ctcatcggta tttgccggat ccatctggta ggttttcttg
    27181 tccgccttgc ccaaattgcc cgaactgccc accgcatcgc ggaacggccc gtaaaacgcc
    27241 gaagcatatt tggcggaata cgccataatc cgcgtgtgga tatgcccggc atcctccaac
    27301 gcctcgcgaa tcgcaccgat acgcccgtcc atcatatcgg aaggggcaac cacctgtgcg
    27361 cccgcttcag cgtggcacaa agcctgcttg accaaaacct ctacggtttc atcgttcatc
    27421 acataaccgt tttcgtccgt cagcccgtcc tgaccgtgaa ccgtataagg atcgagcgcg
    27481 acatccgtca taatgcccag ttcgggaaac ctctcgcgca gggcgcggac ggctgccggc
    27541 acgagtcctt cgggattgta cgcttcctct gcacgctcgg ttttgtttgc cgtaaccacg
    27601 ggaaagagtg ccaacatcgg aataccgagc tttaccgcct cttccgccgt aaacagcagc
    27661 ctgtccaaac tttgacgctt cacacccggc atagaaggca catcctcctc gcgcgccgac
    27721 ccctccaata cgaacaccgg ataaatcaaa tcatcggcgg tcagcgtgtg ttcgcgcatc
    27781 aggcggcgtg aaaaatcgtc cctgcgcata cggcgcatac gcgaagccgg aacattgcgg
    27841 taaggaaact gcataagccc tccaatcatc ctgtcaacaa ttcaaaccat acggaagccg
    27901 ccgcaacttg cagacagcat cgggcggcaa tcaaaatccg ttttcaccgg aaagggtttc
    27961 ggcccgccga aatgccgcgc cgaaggacgg cgtcccgccc attaaagaac aatagcaaaa
    28021 caacagcttc aggctgtcag ccttcgatat tcttacgcca caataccaaa agtttcccga
    28081 tatgctgaac aggttgcgcg tcaaccgcct cacataaggc agtgcagatt tcgatacgtt
    28141 cggcacggtc gtcgccgaat acgcgcactt taatcagctc atgcgccgtc aatgccgcat
    28201 cggtttcctt gatgaccgcg tccgtcagac cctgctgacc gaccatcaca acaggatgga
    28261 gatggtgcgc gcgcgctttc agttccaaaa tttctttggt gttcaatttg gtatccgtca
    28321 ttttcctact gcttgaataa aaagaataat gcggcattgt acgcgatttg gcacgacatc
    28381 ggcaaaatta acgtacaata cgcggtttcc attccgaccc gcgaaccact atggctgtac
    28441 gttccaaatc ctcaaaagcg tggctgcacg aacacgtcaa cgaccactac gtccatatgg
    28501 cgcaaaaaga cggctaccgc gcccgtgccg catacaaact tttggaaatc aacgacaaag
    28561 acaaattaat caaacccggc acggtacttg ccgacttggg cagcgcgccg ggaagctggt
    28621 cgcaggttgc cgccaagctg acgggttctt ccggagcagt tttcgccttg gacatcctgc
    28681 ctatggaagc catagggggc gtctccttca ttcagggcga cttccgcgag aacgacgtac
    28741 tggcacaatt cgaaaccttg ttggacaacc gcccgctcga ccttgtaatt tgcgatatgg
    28801 cgcccaatat gtcgggaaac gccgtaagcg atcaggcacg cagcttttat ctgtgcgaac
    28861 tggctttaga cttcgcctcg caacacctga aaaccggcgg cagctttttg gtcaaagtct
    28921 ttcagggtgc aggctatcag gaatacatgg cagccatgcg cgaaattttc ggcacggtgc
    28981 agacgcgcaa acccgaagcc tcgcgcaatc gctccagtga gatttattta ttgggcaaaa
    29041 ataaacgctg acaatacaga cggcgtgctt tacaatcatt tccgttttac acctcaatta
    29101 tggagccttg ctaagtgggg aacaccttta aatcaatcct tgtctgggtc gccttgggta
    29161 tcggcctgat ggctgcgttc aacgctttag acggtaaaaa agaagacaac gggcaaatcg
    29221 aatattctca gttcatccaa caggtcaaca acggcgaagt atccggcgtc aacatcgaag
    29281 gatccgtcgt cagcggctac ctgattaagg gcgagcgcac cgacaaaagc accttcttca
    29341 ccaacgcgcc tttggacgac aacctgatta aaacactgct cgacaaaaac gtccgtgtaa
    29401 aagtaacgcc ggaagaaaaa ccgagcgcgc tggctgccct gttttacagc ctgctgcccg
    29461 tcctgctgct gattggcgcg tggttctact ttatgcgtat gcagacgggc ggcggcggca
    29521 aaggcggcgc attctcattc ggcaaaagcc gcgcccgcct actggacaaa gatgccaaca
    29581 aagtgacctt tgccgatgtc gccggctgcg acgaagccaa agaagaagtg caggaaatcg
    29641 tcgattacct caaagcgccg aaccgctatc aaagcctcgg cggtcgcgtg ccgcgcggca
    29701 tcctgctggc gggcagcccg ggtacgggta agacgctttt ggcaaaagcc attgcaggcg
    29761 aagccggcgt gccgttcttc agcatttccg gttccgactt tgtcgaaatg ttcgtcggtg
    29821 tcggtgcgag ccgcgtccgc gatatgttcg agcaggcgaa gaaaaacgct ccctgcatca
    29881 tctttattga tgaaatcgac gcagtcggcc gccaacgcgg cgcaggtttg ggcggcggca
    29941 atgatgagcg cgagcaaaca ttaaaccaat tgttggttga aatggacggt tttgagagca
    30001 atcagactgt aattgtgatt gcggcaacca accgccccga cgtactcgat cctgcgctgc
    30061 aacgccccgg ccgtttcgac cgccaagtgg ttgtccccct gccggacatc cgggggcgcg
    30121 aacagatttt gaacgtccat tctaaaaaag tgcctttgga caaatctgtg gatttattgt
    30181 ccctcgcgcg cggcacgccg ggtttttccg gcgcggattt ggcgaacttg gtcaacgaag
    30241 ccgccctgtt tgccggccgc cgcaataaag tcaaagtcga tcagagcgat tttgaagacg
    30301 ccaaagacaa aatctatatg ggtccggaac gccgcagtat ggtgatgcac gaagacgaaa
    30361 aacgtgcgac ggcgtatcac gaatccggac acgcgattgt tgccgaaagc ctgcccttta
    30421 ccgaccccgt ccacaaagta accattatgc cgcgcggacg tgcgctgggt ctgacttggc
    30481 agcttccgga gcgcgaccgc atcagtatgt ataaagatca gatgttgagc cagctctcca
    30541 tcctgttcgg cggacggatt gccgaagaca tcttcgtcgg acgcatctcc accggcgcat
    30601 caaacgactt tgaacgcgca acccaaatgg cgcgcgaaat ggtaacgcgc tacggcatga
    30661 gcgacaaaat gggcgtgatg gtttatgcgg aaaacgaagg cgaagtcttc ttaggacgca
    30721 gcgtaacccg ttcgcaaaac atttccgaga aaacccagca ggacatcgat gcggaaatcc
    30781 gccggatttt ggacgagcag tatcaggttg cctacaaaat cctcgatgaa aaccgcgaca
    30841 agatggaaac catgtgcaaa gccctgatgg aatgggaaac catcgaccgc gatcaggtac
    30901 tggaaatcat ggcgggcaaa caacccagtc cgcccaagga ttacagccac aacctgcgcg
    30961 agaatgcgga cgcggcggaa gataacgcgc cgcacgctcc gactcgggaa gaaaccgaag
    31021 cacctgcccc ggcagacacc gcttcgacag agtccgagca gcagcctgaa aacaaggctt
    31081 aacttcccga acaaacggca gcccgcaagc tgccgttttc ccatcctgtt ttcagacggc
    31141 attttccgct caatgccgtc tgaaacgcca aagccgtatc ggtttttgcg gatctgcgat
    31201 atggcggttt aaattgaaat cagacgaggc aaggctgtac cggtttaaaa ttaaaccgct
    31261 ataataccgc ctttcgaata cacgcccgca ttggtgatgc ctgtgaaaaa agttgaaaaa
    31321 aacatcttgg tgctgcacgg cgcggacaaa atgttcgagc tggtcgataa ggttgaagac
    31381 tatccgcact ttctgccgtg gtacagcaag accgaggtca tcgggcgtag cggcaacgaa
    31441 ctgaaggcgc ggctgtttat ggactatatg cacgttcgcc aatcattcgc cacgcacaac
    31501 cgcaacattc cgggcaggga aatccgtatg gaactgctcg agggtccgtt caaaacctta
    31561 cgtggaacgt ggaaatttat cgatttgggc gacgatatgt gcaaaatcga attcaatttg
    31621 gaatacgatt tttccaatgc cgttttgtcc gccttaattt cccccgtctt caaccacctt
    31681 tccgccacgc tggtcgaagc gttcgtcaaa gaggcagacc gccgttatgc ttgaaattga
    31741 gattgtgtac gggctgcccg accgacaggt tttgaaaacc atgcagcttg ccgagggaac
    31801 aaccgtccgc gccgccgcac tgcaaagcgg tttggacggc atatttgaag atttaaacct
    31861 gcattccgcg cctttgggca ttttcggcaa agccgtcaaa gacgacacgc ccctgcgcga
    31921 cggcgaccgc atcgaagtgt accgcccgct gttgatcgac cccaaagaag cgcgccgcaa
    31981 acgcgttcaa aatcaagaag aataaccatg ccgtctgaag ccttcagaca gcattcgaca
    32041 gaaacacgga aaatatcatg tcaaacaaaa tcaaaatgct tgtcggattg ggcaaccccg
    32101 gcaaagaata cgaacaaacc cgacacaatg cgggtttttg gttcctcgac gaactggcgt
    32161 ggaaatggaa ggcttcattt aaagaagaaa aaaaattctt cggcgaagtc gcccgtgccg
    32221 ccctgcccga cggcgacgtt tggctgctca aacctgccac gttcatgaac cgttccggac
    32281 aggcagttgc cgcgcttgca cagttctaca aaatcaaacc cgaagaaatc ctcgtcgtcc
    32341 acgacgaact cgacattccc tgcggacgga ttaaattcaa actcggcggc ggcaacggcg
    32401 gacacaacgg cttgaaagac attcaggcaa aactcggcac ggcagactat taccgcctgc
    32461 gcctcggtat cgaccacccg ggcgaccgca acctcgtcgt cggctatgtc ctgaacaaac
    32521 ccagtacgga acaccgccga cagattgacg atgccgtcgc caaatccctg caagccatac
    32581 ccgacatcct tgccggcaaa tgggaagaag caacccgctt cctgcacagc aaatgacccg
    32641 atgccgtctg aagccctttc agacggcatg ttcccgattt ccatatccga acagtcatga
    32701 ccgaactcaa gcagcttatc caaaccgaat ccatccccgt catcgaagaa accctcgatt
    32761 tcctgctgta cgaatgcagc atcgacgacg caccatccgc cgaagaagtg gcacaatggc
    32821 gcgacatact tgccgcacgc ggcggcaaat tcctgcgcct gtccaaaatc tgccaaacgt
    32881 ggctggacga ggaggcggca tgaagctgcc gcgcaaccgc ttcagcctgc tttccgcatt
    32941 gtggtttgcc ggcggcatct attcgctgct cttcaaagct gccgacaccg cgccgccgcc
    33001 gtttccgcat ttcgacaaag cagcacacct tgccctgttt ttcgcacaaa tctggctttt
    33061 gaccaaagca ttcaaaaccg gaaaacttcc catcccctac cgcagcctga tggtctttgc
    33121 cctctgtttc gccctcttca gcgaatgcgc gcaggcatgg tttaccgcaa cgagaaccgg
    33181 cagtttgggc gatgttcttg ccgatatggc aggtacggtt ctcgcactct ttgccgcccg
    33241 cgccgccgac cgcccggact gaatcggttt atttccccca aacaggatgc acctcttccc
    33301 gatacatcct atttttcccc ttacatatca atcccatctc ataaacaaaa ccgacaaatc
    33361 gtttacaata tatttacact acatcagatt acaaatatac tcgaaccagt tgtagaatcg
    33421 gcggttccac aaaccgtttc ggattgcacg acacaaaaga aaaaccgatt ttattgcctt
    33481 aaaggagtat tcatgaacct gcatgcaaag gacaaaaccc agcatcccga aaacgtcgag
    33541 ctgctcagtg cgcagaagcc gattaccgac tttaagggcc tgctgaccac cattatttcc
    33601 gccgtcgtct gtttcggcat ttaccacatc ctgccttaca gccccgatgc caataaaggt
    33661 atcgcgctgc tgattttcgt tgccgcactt tggtttaccg aagccgtcca cattaccgta
    33721 accgcactga tggtgccgat tctcgccgtc gtactcggtt tccccgacat ggacatcaaa
    33781 aaggcgatgg ctgatttttc caacccgatt atctacattt ttttcggagg cttcgcgctt
    33841 gccaccgccc tgcatatgca gcggctggac cgtaaaatcg ccgtcagcct gttgcgcctg
    33901 tcgcgcggca atatgaaagt ggcggttttg atgttgttcc tcgttaccgc ctttctgtcc
    33961 atgtggatca gcaacaccgc caccgccgcg atgatgctgc ctctagcaat gggtatgctg
    34021 agccacctcg accaggaaaa agaacacaaa acctacgtct tcctcctgct cggcatcgcc
    34081 tattgcgcca gcatcggcgg cttgggcacg ctcgtcggct cgccgcccaa cctgattgcc
    34141 gccaaagccc taaatctgga cttcgtcggc tggatgaagc tcggcctgcc gatgatgctg
    34201 ttgattctgc ccttgatgct gctctccctg tacgtcatcc tcaaacctaa tttgaacgaa
    34261 cgcgtggaaa tcaaagccga atccatccct tggacgctgc accgcgtgat cgcgctgttg
    34321 attttccttg ccacagccgc cgcgtggata ttcagctcca aaatcaaaac cgccttcggc
    34381 atttccaatc ccgacaccgt tatcgccctg agtgccgccg tcgccgtcgt cgtcttcggc
    34441 gtggcgcaat ggaaggaagt cgcccgcaat accgactggg gcgtgttgat gctcttcggc
    34501 ggcggcatca gcctgagcac gctgttgaaa acatccggcg cgtccgaagc cttgggacag
    34561 caggttgccg ccaccttttc cggcgcgccc gcatttttgg tgatactcat cgtcgccgcc
    34621 ttcattattt ttctgaccga gttcaccagc aacaccgcct ccgccgcatt gcttgtaccg
    34681 attttctccg gcatcgctat gcagatgggg ctgcccgaac aagtcttggt attcgtcatc
    34741 ggcatcggcg catcttgtgc cttcatgctg ccggttgcca caccgcctaa cgcgattgtg
    34801 ttcggcacgg gcttaatcaa gcaacgcgaa atgatgaatg tcggcatact gctgaacatc
    34861 ctctgcgtag tattggttgc tctgtgggct tatgctgtac tgatgtaaac catcgaccta
    34921 aacaacaaga ccgtctgaaa gaatattttt cagacgacct tgaagtttgt cgttcagaca
    34981 caatttgtcg aatcattcaa aaccggattc taacgaaagg aaacccatga ttatcctgca
    35041 caccaacaaa ggcgacatca aaatcgaact cgatttcgac aaagcccccg ttaccgccaa
    35101 aaacttcgag caatacgtca aaaacggctt ctacgacggc gtaatcttcc accgcgtcat
    35161 caagggcttc atgattcaag gcggcggcat ggatgaaaac atgaacgaaa aagaaacccg
    35221 cgatccgatt caaaacgaag cgtccaacgg cctgcccaac gataaataca ccatcgccat
    35281 ggcgcgtact tccgatcccc attccgccag cgcgcaattc ttcatcaaca ctgccgacaa
    35341 cgctttcctg aacttccgtt ctaaagagct gtacggcaaa accgtcgtcc aagactgggg
    35401 ctatgccgta ttcggtaaag tcgttgacgg ttttgacgtt gtcgatgcca tcgaaggcgt
    35461 ttctaccaaa cgtcatggtt accacgacga cgtaccgagc gaacctgtcg tcatcattaa
    35521 agccgaagcg gtataaaccg acaatccgaa agcagcctgc acaaaggctg cttttatttc
    35581 agacggcatg ttatttgatg taaccgtgct atgccgtctg aaaaccggac gcaagccttc
    35641 agacggcata ccgctatgtt aaaatatgcc cgtttttcct aaacggacac aaaggaaacc
    35701 ttatggcaag catcgcccgc gacatcttca aagcctacga catccggggt attgtcggca
    35761 aaaccctgac cgacgaagcc gcctacctta tcggcaaagc catcgccgcc aaagccgccg
    35821 aaaaaggcat tacccgcatc gcgctcggac gcgacggacg cttgagcggt cccgaactga
    35881 tggaacacat ccggcgcggc tttaccgaca gcggcatcaa tgtcctcaat gtcggtatgg
    35941 ttgccactcc tatgctctac ttcgccgccg tcaacgaatg cggcggcagc ggcgtgatga
    36001 ttaccggcag ccacaatccg cccgattaca acggctttaa aatgatgctc ggcggcgaca
    36061 cgcttgccgg cgaagccatc caagaacttt tgtccatcat tgaaaaagac ggttttgctg
    36121 ccgccggcaa acaaggcagc gtcaccgaaa aagacatctc cggcgaatac ctcaaacaca
    36181 ttaccggaca catcaggctc aaacgcccga tgaacatcgc cattgacgcg ggcaacggcg
    36241 tgggcggcgc gtttgccggc aaactctaca aaggcttggg caacgaagta accgagcttt
    36301 tctgcgacgt ggacggcact ttccccaacc accatcccga cccatccaaa ccgaaaaacc
    36361 tgcaagattt gattgccgcg ctgaaaaacg gtgatgccga aatcggcttg gcgtttgacg
    36421 gcgatgccga ccgcttgggt gtggtcacca aagacggcaa cattatttat cccgaccgcc
    36481 aactgatgct tttcgcgcaa gacgtgttga gccgcaatcc taaagccaaa gtgattttcg
    36541 acgtcaaatc cacccgtctg cttgcgcctt ggattaaaga acacggcggc gaacctgtga
    36601 tggaaaaaac cggccacagc tttatcaaat ccgccatgaa aaaaaccggc gcgccggttg
    36661 ccggcgaaat gagcggacac atcttcttca aagaacgctg gttcggcttc gacgacggtc
    36721 tgtacgccgg cgcacgcctc ttggaaatcc tgtctgcctc cgataatccg tccgaagtgt
    36781 taaacaacct gccgcaaagc atttccacgc ccgaactcaa catcgccctg cccgaaggca
    36841 gcaacggcca tcaggttatc gacgaactcg ccgccaaagc cgaatttgaa ggcgcaaccg
    36901 aaatcatcac catcgacggt ctgcgcgttg aatttcccga cggcttcggt ctgatgcgtg
    36961 cttccaatac cacgccgatt ctggtgttgc gttttgaggc ggatacgcaa gaagccatcg
    37021 agcggattca aaaccaattc aaagccgtca tcgaaagcaa tccgaatcta atctggcctc
    37081 tgtaaacaca ggaaaaatgc ttaatcaaat cttggtagat tggatttggc ttaaaaatct
    37141 ccgcgtccgt tcgtgtttgg ggtggtcgaa caactctttc gggctgccct gctctacgat
    37201 aacgccgccg tccatcacga caacggtagt cgcaacttcc agcgcgaact tgatttcgtg
    37261 ggtaacgacg accatcgtcc aaccttcccg cgccaattcc ttcatggcgt tcaacacgtc
    37321 ttgcaccaac tcggggtcaa gcgcggaagt cggttcgtca aacagcatca gctcgggctg
    37381 aatcgccaat gctcgggcaa tgccgacgcg ctgctgctga ccgccggaaa gctggtaggg
    37441 atacaaatcc actttgtcgc ccaagccgac tttttccagc agtttcagag cctcttcgcg
    37501 cgcttgggcg gcaggcttgc cctgtacggc aaccggtcct tccatcacgt tttccaaggc
    37561 ggttttgtgc ggaaagaggt tgtattgttg aaacaccatg cctgatttgc ggcgcagtgc
    37621 caaaatatcg tgtttgcttg gttttttaga aaaatcgatt ttcagcggtc gctcgttgtc
    37681 gaactcgatt tgtccgtctt cgggcatttc caacgcgttt aggcatcgca gaaacgtcgt
    37741 tttgcctgag ccggaaggcc cgaggatgac gaccacctgc cctttgcaca catccaaatt
    37801 gatgccgcgc aaaatggtat tttcgccgaa ggtcttatgg atattgcgga ttttaatcat
    37861 gacaactcct tatttggcga catagcggtc gaagcgtttt tccaagcgcg cctgaatcag
    37921 gaacagcact ttgcaaaaac accagtaaac caaagcggct tcgatataga cgggcaaaaa
    37981 gtcataagtg cggtttgccg tttcctgcgc gacgcggaat aattccgtta ccgtcacgac
    38041 tgccgcgagc gaggtgtttt taaacaaacc gataaactcg ttgctcaaag gcggcacggc
    38101 aacgcgaaat gcctgcggcg cgacgatgcg gcggaacgtc tgcatatagg tcatgccgat
    38161 ggagaaacct gcttcccatt ggcctttcgg tacggacaaa attgccgcgc gtatggtttc
    38221 ggaagcatat gcgccgacat tgagcgaaaa gccgatgatg gcggcaggaa tcgggtcgat
    38281 atagatgccg acggaaggca gcccgtaaaa cacaatcaca agctgaacca acagcggcgt
    38341 accgcgaatg acggaaatat aaaattccac caatttcagc aggattttcc gcacgatgcc
    38401 gccggcgggc ataatccgca ccaaagccac ggctaccgca atcatcatac cgataacgaa
    38461 agaagctgcc gccaaaggca gagagaccgc gaagccggct ttgaccatag gcaaaaacgc
    38521 gctgacaatc atatcggcgc gtgtttccgt cataaacggc agcgaagcaa ggaaattatt
    38581 gaacactgat gtcttttccg aagaattgtt cgcccagttt tttcagcgta ccgtcggctt
    38641 tcagctcgtt gattgccgta ctgaatttcg ccacggcttc gtcattgccc ttgttgacaa
    38701 tcaggccgga accgactttt tcatcggcag gtgcggacca aacgattttc acgcccgcat
    38761 tcgggttttt cttcagatag tccaaaaccg ccaattcgtc gttcagggtt gcatcggcac
    38821 gtttttgttc aatcagggtc agcgattgcg ccaaaccgtc cactgccacc aaatctgcgc
    38881 ctgcagcttt ggctttttcg ccgtagttgc tggtcaggga ttgtgcggtt ttcacgcctt
    38941 tgatgtcgtc gatagatttg atgttgctgt cgttacgggc aaccaatacg gcaccgctcc
    39001 agctgtaagg atcggatttg tcgaatgtcg cttggcgttc ggggctggtc agaccgactt
    39061 ggtttgccac cacgtcgaaa cgccccgcct tcaaacccgc catcatcgaa tcccattgcg
    39121 tttctttaaa ctcgactttc acgcccagtt tttccgccac ggcgcgggtt acttccacat
    39181 cgtaaccggt cagtttgccg tccttgtcgt ggtaggtaaa cggtgcgtaa gtgccttccg
    39241 tgccgacggt aaccgtgcct ttattgttga tgcgctcgat taaagaaccg gaaactgccg
    39301 attgtgcagg cgcggaagat gctccgctgc cgctttccga accgccgcag gccgccaaaa
    39361 ccaatgcggc aatgccgccg agtacgaatt ttttcaacat cattctctcc tgtaaaaagt
    39421 gtgcaagtgc ggcattctaa gtgaaattgc ggcaaacaca aagaatactt tttttatatg
    39481 gttattccaa atcggaatgg aaaagatatg ccgaagccgc cggaagcgga aataaagggg
    39541 gcgggaaagg cgacgggcgg cacgaaaccg aaaagcggca tcaggtatgc aaacggcgga
    39601 ttcacgcacg ccgttccggc aaaaatccgc ctgccgattc ggtgctataa tccatccgaa
    39661 acagatgaca ccaaaaagga acatctcatg aacacgcccc aatccgccat cattcccgac
    39721 cacgcccaag ccggcatctt tatcgaagcc gacttcgccg ccaaccgcct caacgatatt
    39781 aaagccgcct gccgcgcttc gctcgacgcg ttatccgcct tgaaaacccg ctttccggac
    39841 gatattttgg gtctgaccat cgccttcggc agcaaagcct gggcaacatt cggacatacg
    39901 gacgaaggca gtgaaatcaa acccttctcc gaaatgggca acgggcttgc gccgtccacg
    39961 cagcacgata tgtccatcca catccaatct ttccgccaaa acgccgccta cgcgcttgcc
    40021 caatccgttt tgggcgcgtt cggcgacagc atatgcgtcg cgtccgaaga acacggtttg
    40081 cgcctgtatc aggatcgcgg gctggacggt ttcgtcgacg gcacggaaaa cccgcagggc
    40141 gatgaaaatg tccgcgaagt cgccatcatc cccgaaggaa aacccgatgc gggcggcagc
    40201 tatgtcctgc tgcaaaaata cctgcacgat ttgaaaaaat gggatgccgt ccccgtcgcc
    40261 gaacaggagg cctcggtcgg acgcggcaag gaaaccgacg acgaattcgg ccgcgatgtc
    40321 cgcctgcccg attcgcacct cggccgcgtc aacctgaaag aaaacggagt cggcctgaaa
    40381 atcgtccgcc gcagcctgcc cttcggcaaa atcagcggcg aacacggttt gatgtttacc
    40441 gcatactgcc gcacgctgca caatatcgaa gcgcaattat tgagtatgtt cggcgatacg
    40501 gacggcaaaa ccgacctgct gctccaacat ctctccgccg ccgtttcggg cggatactac
    40561 tacgcgccgt ctgtcgaacg cctgcaaaac ctctaagccg gacgatgccg tctgaaacca
    40621 tttttcagac ggcattttcc cgttttatag tggattaaca aaaaccagta cggcgttgcc
    40681 tcgccttagc tcaaagagaa cgattctcta aggtgctgaa gcaccaagtg aatcggttcc
    40741 gtactatttg cactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
    40801 ccgtccaacc gttttccgag cgcgcactat gtctgcaccc atccaagcat tcgactcgct
    40861 aaccgtcccc attgccggca ccaacctgat tgaggcctct gccggcaccg gcaaaaccta
    40921 cggcattgcc gccctgttta cgcgcctgat cgtattagaa caaaaaaacg tcgagcgcgt
    40981 attggtcgtt accttcacca aagccgccac cgccgagttg aaaacacgcc tgcgcgcacg
    41041 tttggacgat gtgttgcagg ttttagaaag caaagaaatt gccgaacttg gagacggcgc
    41101 gctttcagac ggcatcgccg cctattgtgc ggaacaccac aaaggcgaca ccttcctgcc
    41161 cgcactctta aaacaggctt tgcaaaaaga gggccggacg cgtctgattg tccgcctcaa
    41221 ggccgccatc gggcaattcg acaacgccgc catctacacc atccacggct tctgccagcg
    41281 catcctgcgc gactacgcct tcttgtgcca agcaccgttc gatgtcgaac tgaccgaaga
    41341 agacggcgac cgcctgctta tcccggcgca agatttttgg cgggaacgcg tcagcaatga
    41401 tccggtgctt gccgcattgg cgtttaaacg caaagctgtg ccgcaaaccg tccttgccca
    41461 aatccgcgcc tacctgtccc gcccgtacct gaatttccgc cgtccgcagg cggatttgaa
    41521 acaggcgcag cgcaacgccg aaacctcatg gcaaaccgtc tgccgcctgc tgcccgagct
    41581 ggaagccggc ttttggcgca tccatcccga cctcaacggc aacagttacc gcaaaaacag
    41641 cttcggcaac ctttttaaag aactggcaca aaaatccgcc gccggacaac tgccctttct
    41701 ggacaaagac acacacgaca gactcttgaa acttgcatcc gacaaactcg aagccggact
    41761 gaaaaaaggc aaaacgcccg atgcggcagt atttgccgaa ttgcagaaac tggcagactt
    41821 cgggcgcgat ttgaacgcac tcgaagaagc ggaagaagca acaatgatcc ggctgcaact
    41881 ggatttaatc gaatacctca accgcagcct tgccgagatg aaaaaatcgc gccgcgaacg
    41941 cggtttcgac gacctgctgc tcgatgtcca caccgcgctg accgacaatc cgcacgccga
    42001 aaccctcgcc cgcgccgttg ccgaaaactg ggaaaccgcg ctgatcgacg agttccaaga
    42061 caccgacccg ctgcaatacg aaatcttcca aaaaatcttc atcgcccaaa accgaccgct
    42121 gttcctcgtc ggcgatccca aacaggcgat ttacagcttt cgcggagcgg acatttacgc
    42181 ctaccttcag gcggcggaag acgcgcggca ccgctacacg ctcgccacca actaccgcag
    42241 ccacgccgcg cttatcggca gcataggcgc gctgttccgc ctcaaagaac gcccgttcgt
    42301 tttggaaaac atcggctatt cggaagtcgg tgcggcgcgt gccgaaagca gattgtcgcc
    42361 caaacgtcct gccgtacagg ttcgttggct gcacgaaaac gacaatgaaa aagccaacaa
    42421 agacgttttg cgccgccgtg ccgccgacta ttgcgccgac gaaatcgccc acgcgctcaa
    42481 cgaagccgcc gaatgccgtc tgaatttcaa aggctgcccg ttgcagtcgg gcgatattgc
    42541 cgtgctggta cgcacgcaca acgaggcggt gatggtttcc gccgccctga aaaaacggca
    42601 ggtgcaaagc gtcctgcttt cgcgcgaatc cgtgttcgcc tcgcccgaag ccgccgccct
    42661 gtccgcactc atcggcttct ggctcgaacc gcaccgcgcc ggaacgctgc gctttgtcct
    42721 aacaagcggc atattcggtt atgacgcgca gcaattgcac gacttcaacc aaaacgaaag
    42781 cgagattttg cattgggcgg aatctgcccg aaccgcgctc gacaactgga atcaatacgg
    42841 cattttcgcc gccatgcagc aattttccca aacacacggc atcgaaacac gcctcttaag
    42901 ccggaacaac gggcgcagcc tgaccaacta tttccaactg ctcgaactgc ttgccgccga
    42961 agacgcgcaa aaccgcaacc ccgccgcgct gcacaaatgg ctgcgcgacc aaatcagcct
    43021 ggccggcaac aacggcggcg acaaccgcgc catccgtctg gaaagcgacg aagatttggt
    43081 caaaatcgtt accatgcacg cctcgaaagg tttgcagtat ccgctggtgt actgcccgtt
    43141 tgcgtgggac gcgcaagata ccgggccgtc cgactggcaa atcctccacc aaagcgcaaa
    43201 ccgaaccgaa ctgttggcaa aggcgcaact gtccgaagac gaacagaaac aatacgccga
    43261 tgaagaaatg gcggaacgcc tgcgcctgct ttatgtcgcg ctgacgcgtg ccgaggaaca
    43321 gctcaacatc tacgccgcgt actccaccaa tactgccgac aaccccctcg cctacctgat
    43381 tgaaggctcg ccccaagaca gccgtgaaac cgtccgccgt gcctatgcgt gtgaaaaaga
    43441 cggcatcgcg atgctcaaac gcaactggcg gcgcgtggcg gacaacgccc cttccggcac
    43501 aaatttcgcc ttcacagaag atgcgccgcc ccctgccgcc tatcgcggca acgccggtca
    43561 aaccgccgaa tttgccgcaa acagcattcc cgaacgcaga ttccgatttg tccgccacac
    43621 cagctttacc gccttaagcc gccataccca aacgcccgac ggcggcgaag aagatgcctg
    43681 cccgtccttg gatgccgccg aaatctcggt agccgcgatg ccgtctgaaa cgccgacggc
    43741 ttcagatggc atatcgatac acaactttcc gaaaggcacg caggcggggc tgtgcctgca
    43801 cgaaattctt gaagatttca aattcggaca agcagccgcc ggacaggaaa ccctcatcac
    43861 cgacaagctg aaaaaatacg gatttgaaga aatatggctg cccgccgttg ccgaaatggc
    43921 ggaagcctgc cgcaaaacgc cgctgacggg ggcatacggc ctgtccgaca tcccgcccga
    43981 gtgccgctgt cccgaaatgg gctttaccct ccacaccgaa gacttcggcc tcaaacggct
    44041 acgcgattgg tttgcccgcg acgacatcag gctgcccgaa gtctgccgtg ccgctgccga
    44101 aacgctagac ttccacaccg tcaacggctt tttaaacggc tttatcgaca tggtctgcca
    44161 agaccccgag ggaaatatct gcgtcatcga ctacaaatca aaccatctcg gcgcggacgc
    44221 atccgcctac acgcggcagg cgatggacga agccgtcgcg caccaccact attaccttca
    44281 ggcgctgatt tacgccgttg ccgccgcacg ctacttcaaa ctgcgcggac aaccgcccgc
    44341 cgccgtttcc gtccgctacc tgtttttgcg cggattggat ggcaaaggcg gcggcgtttg
    44401 gcgttgggac atagatgccg ccgctttgga acagataaaa taacttcccg tcctttcgga
    44461 caacaaccgc aggagaaccc tatgaatatc aaacacctga ttaccaccgc actcattgcc
    44521 tcagccgcct ttgccgcgca ggcagccccg caaaaacccc tatccgccgc ccaaaccgcg
    44581 caacatccgg tcgtttggat cgatgtccgt tccgaacagg aatttagcga agggcatttg
    44641 cacaacgcgg tcaacatccc cgtcgaccaa atcgtccgcc gcatacacga agccgcgccc
    44701 gacaaagaca cgccggtcaa cctctactgc cgcagcggac ggcgtgccga agccgccctt
    44761 caagaactga aaaaagcagg ttatacaaat gttgccaatc acggcggtta tgaagacctg
    44821 ctcaaaaaag ggatgaaatg acgcaatgcc gtctgaaagg acaggctttc agacggcata
    44881 cggcgttccg gcacgcggcg caacatcggg cgcggcgcgc gccgccccgt ccgaagcctg
    44941 ataaacaaac cgaaaaggaa atacgatgaa acacatactc cccctgattg ccgcatccgc
    45001 actctgcatt tcaaccgctt cggcacatcc tgccagcgaa ccgcaaaccc aaaacgaaac
    45061 cgctatgacc acgcataccc tcacctcaaa atacagtttt gacgaaaccg tcagccgcct
    45121 tgaaaccgcc ataaaaagca aagggatgga catttttgcc gtcatcgacc atcaggaagc
    45181 cgcccgccga aacggcttaa cgatgcagcc ggcaaaagtc atcgtcttcg gcacgcccaa
    45241 agccggcacg ccgctgatgg tcaaagaccc cgccttcgcc ctgcaactgc ccctacgcgt
    45301 cctcgttacc aaaacggacg gcaaagtacg cgccgcctat accgatacgc gcgccctcat
    45361 cgccggcagc cgcatcggtt ttgacgaagt ggcaaacact ttggcaaacg ccgaaaaact
    45421 gatacaaaaa accgtaggcg aataagcccg tcgccgacat atggcggatg gaaatcaaat
    45481 gcacacgccc ctcattccca cgaagtcggg aatccaatcg gttgggttac cgtgattttc
    45541 aatcattgca gaaacggacg actccagatt cccacccttg cggggatgac gggcgtgtgt
    45601 gtttttgcca catcacaggc aactttgccg caaatcttat ctgtcgccgg tatgccttct
    45661 tgtttcaatc cgccacaaac caaatgccgt ctgaaacccg atttcagacg gcatttccgt
    45721 ttattccctg ctgtcgcggc aaatatcaat ggcttcctgc aaactcgaaa cgccgtagat
    45781 tttcaggttc ggaaactctt tggcattgcg cggcatattg gctttgggaa cgatggcgcg
    45841 tttaaagccg agcttttccg cttccttgag ccgctcttgt ccgcgcgcga cggggcggac
    45901 ttcaccgctc aaaccgattt ctccaaatgc aaccattttt tcgggcagcg ggcggttgcg
    45961 gaagctggaa agcatcgcga ggatgaccgc caaatccgcc gccggttcgc cgattttcac
    46021 accgccgacg gcgtttaaaa acacatcctg atcgaaacag gcgatgccgc cgtggcggtt
    46081 taatacggca agcagcatcg caaggcggtt ttgttccagt ccgacggtga ggcgtttggg
    46141 ggtgaagccg tgtgcgtcat cgaccaatgc ctgaatttcg accaaaagcg ggcggctgcc
    46201 ttcctgtgta accaaaacgc acgaaccggg cgtgtcgtcg cggtagctgg caaggaagat
    46261 ggcggacggg ttggacacgc ctttcaaacc gttttcggtc atagcgaaca cgcccagttc
    46321 gtttgccgcg ccgaagcggt ttttgatggc gcgtatcatg cggtagttgg aatgttggtc
    46381 gccctcgaaa tacagcacgg tatcaaccat gtgttccagc acgcgcgggc cggcaatcgc
    46441 gccgtctttg gtcacgtgtc cgaccagtat catggcgatg cccatctgtt tcgccatgcg
    46501 cgtcagttgg gcggcacact cgcgcacctg cgacacagaa ccgggggcgg aagtgatttg
    46561 gtcggaatac atggtttgga tggaatcgat aaccacgact tcgggctgat gctgtttcaa
    46621 cgctgcttga atcgcttcca tgcggatttc ggcaagcagg ttcacgcctt cggtgggcag
    46681 ttccaaacgc tgcgcgcgca gggcgacttg ttgggcggat tcttcgccgg aaacgtatag
    46741 cactttacgg ctttgcgcca ttttggcgat ggtttgcaac agcagcgtgg atttgccgat
    46801 gccggggtcg ccgccgagca ggatgaccgc accatcgacc aaaccgccgc ccaatacgcg
    46861 gtcgagttcg cccataccgg tcggattgcg cggcacttcg gtggcggtaa cggcggagag
    46921 ggattggacg gtcgaggtat ccgccgccca agattggaag cgggcgtttt tcggctcggg
    46981 cgcggccaag ctttcctgaa gtgtgttcca ctcgccgcaa tgcgggcatt tgccttgcca
    47041 tttcggggag gtgccgccgc attcggtgca ttggtaaagg gttttaagcg tttttgccat
    47101 cggttttccc tgcatctgaa aacaaaaatg ccgtctgaaa atagggacgg ttgggattgc
    47161 gccaatgcgg caacaccgcc gccgtcatgt actatccgta cacggcggat attgccgtat
    47221 tacctaattt tccatccctc ggctttcaga cggcatatcg ggcggtttcc tgccggctta
    47281 cccgccgtga tactgccgag acagctcgtg tacggtatcg actaagattt tggcgtgttc
    47341 ggggtcggcg tgttggttga tgccgtgtcc gaggttgaag acatggccgc tgccgtgtcc
    47401 gtagtcggct aggatacgtg cgacctcggt gcggatggat tccggcgtac cgaagagggc
    47461 gaacgggtcg aagttgcctt gcagggcgac ttgcttgccg acgcggcggc gtgcttcgcc
    47521 gatgttgcac gtccagtcca agcccaatgc gtctgcgccg atttctgcca tactttccag
    47581 ccacagcccg ccgcctttgg caaatacgat aacaggcacg cggcggcctt cgctttcgcg
    47641 tttgagtccg gcgacgatct ggcggatgta tttgaggctg aattctttaa acgccgcatc
    47701 gctcaacacg ccgccccaag tgtcgaaaat ctgcaccgcc tgcgcgcccg cgtcgatttg
    47761 ggcgttgagg taggcggtaa cggcttgggc gttggtatcg aggattttgt gcagcaaatc
    47821 ggggcgcgag tacatcatgg ttttgatggt gcggaattct ttgctgccgc cgccttcgac
    47881 catataacag gcgagcgtga acgggctgcc ggagaagccg ataagcggta cgcggccgtc
    47941 cagtgcttta cggatggagc tgacggcatc aaagacgtat tgcagttttt ccatatcggg
    48001 aacgtgcagc ttggcgatat cggcttcgtg ttgcagggcg cgtttgaatt tcgggccttc
    48061 gccttcggca aagtacagtc ccaagcccat tgcgtctggg acggtcagga tgtcggagaa
    48121 caaaatcgcc gcgtccaaat cgaagcgttc caaaggttgg atggtaactt cggtcgccaa
    48181 tccggtgttt ttgcacaaat cgaggaagct gcccgctttc gcgcgtgtgg ctttgtattc
    48241 gggcagataa cgccccgcct ggcgcatcat ccaaatcggc gtgtattcga cgggctgttt
    48301 aagcagggcg cggaggaagg tatcgttttt taaaagagtc atacgggttt tctgtcagtc
    48361 tgtttgtcaa gtgaaatggt tttcagacgg catttcaacg atgccgtctg aaggtttcaa
    48421 tgggtttcgg cggaaggtcg gttttcctcg gcaacgcttg ccaaaaccaa gttgcgctgc
    48481 gcctccgcct tctgcggttc tccggtttcg tcaaaaacct ttgccagaac caaacgcgcg
    48541 gaaatactcg gctttaatgc aatgctcgct tcaaggtagc cttttgcctt gccccaaagt
    48601 ttgcggccgt aggcgagccg accgagatac atcagcagaa gcgcgttatc gggctgttct
    48661 ttcagccaag catcggcaaa atcgatggct ttctgctgtt cgcgttcgcc caaaaagcgc
    48721 acgctttcga caaaggcttc caaaagctcg gggcggcggt tgtgcggata atgctgtttg
    48781 acccatttga ccgcatcggc atacagtccc aaacgttcgt acttttccgc aaccgatacg
    48841 ctcaattccc cgtttttgag gctgtcggga atccgcttca ggcaggtttt caaagcggcg
    48901 gcatcggcag catccgccag ctggcggcgg tatgcccaat tttgataccg ttccatttcc
    48961 gatttgccca acgcgcccgc cttggaaagt ttttcggttt ttgccagaac ctgcaacgcg
    49021 tcgcccctgt cgaaagcgta acgaagttgc agacgcacga ggcgcgtaag gttggcattc
    49081 atcttcgccg ccgcatgaag attggcttcc gccgcttcgt aatcgcgccg gttcaacgcc
    49141 gattccgcca acaaaagata acgggaaagc tgctgctttt ccggcagttt ggcgatttcc
    49201 gcaagataac ggtcgcgcag ctcgatgttt tccatctgcc cggcggcatg tgcgcccaac
    49261 atcaatgcca aagtccggtt gtctccggcc tctttgttga ccaacacgcg tgaggcttct
    49321 agttccgcct tttcaaaacg cccttcaaaa tacgccaaac ccgccttgtt caaggcaagc
    49381 gcggccttgc ggcctttacg cgccgaaccg aaacgctgca tcttttcggg gatattgaat
    49441 acgccgataa tgaatttaaa caggaaatac cacaccacga cggcaatcag cgaacctaac
    49501 acaaaggcgt gcaggttgat tctgagcatg gtctgtccga gtacgatata cacgtcgccg
    49561 gtgtaaatgc ccgaagccaa tgccagcccg acggcggcgg caaacaggac gacaatccag
    49621 actaccgttt tcatgcgcgt tctcctttag cggacggcga acgccctgcc ttttccggta
    49681 cgggctgttt ttttgcaggc tgttccggtt tgcgttccga aggcagggac ggtgcttcta
    49741 tggtcttcac atccgatgcg gcagccggtt cggaagctgt gttttcgttt gccggttcgg
    49801 aagccgcctg ttctgcttct tgattttccg ccgccgtcat gcgcgtaccg tcgcgatagg
    49861 cgcggacggc atttaggctg tttttcaaac cgtcatccgc cgtcatgcgc acatccaacg
    49921 ccttcaattc cgccagttct ttcagccacg actgcgtggc gggagacttg gcatcgaaat
    49981 actgtctgac ggcggcttcg gcattgttca aatcgccctg atagacttcg ctgttgcgct
    50041 gcattaatgc agtccgcgca tccaaaaggc ggaggcgcag gttttcacgc acaaaatatg
    50101 cctgttcggg agaaatcagc atggcatcgt tgttttccaa acggcggatt tcgaccagcc
    50161 ccttcaatgt gccgagggat ttttcccata cgttctgcca ccatgaagca gaagcggctt
    50221 cgttcttcac ctgtacgccc ggcttcaata cgccgtccaa aatcagcggc agtccggata
    50281 cggcggtttc cagcctgtcg aggcgcaatg ccgtgccgga aatatcgaca tagggacggt
    50341 ttttcagttc cgccaagtcg ctgctgaccg cctgtttgat cggcagaagc tctgcctgat
    50401 tgaaacggga caggcggctg tcgatatgct ccaatacgcc gactgccgtt tggatattgc
    50461 cggtcaacac cagctgttgc gccgccagat tgagtatggt ctcggtttcg tccaccagcc
    50521 aatcggcgcg tcctttggtc aactcgcgat aggatttttg catttccaag atttgttcgc
    50581 cgtttgcttt gacgtttccg tccaaacggt cgagttctga ttgtatggcg gcttgccggt
    50641 tgaggttgtc tttgagcagg gcggcgtttt ccgactcgcc caaggcggct ttgtcgattt
    50701 tttggttgaa tgccagctct tggtttttca agacattctg tccttggaca aacaaaaaac
    50761 cacttgcgcc caaacccaat gccgccaata ccaaggcgca ggttgccaaa gcgttgttgc
    50821 cggactgttt gacgataaaa ggagcggcag gaatgtgtac ttctgtttcg ttttctttgc
    50881 gtggggaaga ggtttcagac ggcatttctt ttgatgcctg tatctcgcgt acgggttcgg
    50941 atgatttgtt ttcaggttcg cccaccgttt tgctccttat taatttgagg ttccgggaaa
    51001 gaccatgccg tctgaaacgg aaatggaaga atgggaaagc gcggcttcca gcgtagggac
    51061 ggtttcgacc gaacacacgc cttcgcgctt caatgcctcc gcaatgcgcg gatgatgggt
    51121 aaagtatagc aaggatttga agaatcggga aaattgcggc ggaagctgcc cgaacagcaa
    51181 gcgcaccagc tcggtcgacg taatataggc ggcggcaata ttttcggttt ggaaattttg
    51241 aaagttcaaa ggtttatgcc gtctgaaata gacttctgcc acctccgtcc gaaaaccttt
    51301 ctcctgcaag gcattcatca aaaaatcccg cccgccgtgt ccgcgcacaa acaatacgcg
    51361 cgcaccttcg ggcagactgt tccaaaccgg caggcgcaaa accgcctcgc tgtcgttgcc
    51421 gtcatcaggc gcgatgaccg ttctgaccaa acagcgttcc aatgcgcggc ggctgccctg
    51481 ccctacggca atctgcgcct ttatgccgtc tgaaaggtta aggtacggga cggcggtttc
    51541 aacggcggtc ggactgaccc aaaacacggc atccgcacgg gcatattgtt cggacaaaag
    51601 ttccagtccg gcagcatctg cttcgatttc gaccggactc aatacttccg cgcgccaacc
    51661 ggcattcagg caagtttcga catcttctgc ggccctgccc gacggacgga caatcagcat
    51721 gacgggtttc gctgtttcca tcgccttatc cgccccgatt actaggaaaa atcgtcatcg
    51781 ttgaaattcg cctgcgcggt tttcggcgta cagccgaccc gtgcgacttc cttgccccta
    51841 cgctccacaa cgacaccgct gctttccgta tgagtcacgg aatcgaagcc tgtccatatg
    51901 gtgtacataa attcgccgtt ttggaatttc atcgtcgccc aacgaccgct gcccatacct
    51961 tgccacctgt cggaacgccc caacaggtca gctttgctgt tgcgtatggc aatttctttt
    52021 tttgccgcac taccgaacga atattcgtaa agattgcggt tgattttttg aacttctata
    52081 tatttgttgt tgtccgtttt acaggaaaac accgtatccg cccacacggt tcgggtcgca
    52141 gccgacagaa gcaatacggc agaaaggaac atttttttca tcgtatttcc ttaatggttg
    52201 aaactccgcc atttggacat ccgtccttcg tggcagcagc atcagatgtt atttgagagg
    52261 ggtgtaaccc cttccaaatt agggcaacac atagggcaac actttatgtg tcgtcctgtg
    52321 tgttgaaaca tcattgcccg tatcctgaaa tagaaaagaa aatgcccgtt ttacggtctt
    52381 ctttccgaca aaatgccgtc tgaaacggat ttcagacggc atggtcgaaa attattgcgc
    52441 ggcaagcggc ttgagcagca aggtttcgcc gctttgcaca actttttcaa gcaggtcgat
    52501 attgggatgc ttgccgggat gggcgcgcgc gtcggcaacg tgttcggcaa accatatcaa
    52561 accctgttct gccgcttctt tgtccaattt tccgtcaaaa cgttctgcca aagcattgta
    52621 cagcttgagc gaaccgagct taccctgaac ggcgggaatg tggtgaaccg ttttgccgtc
    52681 ggcatcctga acgtccaaac cgcccagatg gtcgattgaa gaaaatgtgg cgagatagtc
    52741 ttggaaattc atatcaaatc cgaaaatcag tcagttagcg cgtgccgaaa atcttgtcgc
    52801 ccgcatcgcc caagccgggg atgatgtagc cgttctcgtt caagtggctg tcgagcgcgg
    52861 cggtgtaaat cgtaacgtcg gggtgcgcgt cgttgaccgc cttcacaccc tcgggcgcgg
    52921 caaccagcac cagtgccttg atgtttttgc agcccttggc tttcaaaagg tcgatggtgg
    52981 caaccatcga accgcccgtc gccagcatcg ggtcgataat cagggcagga cgttcgtcca
    53041 tgctgtccac gaatttctcg aagtaggaaa cgggtttcag cgtttcctcg tcgcgctgca
    53101 gtccgactac gctgattttg gcagtcggaa tcaggtcgag tacgccgtca agcataccca
    53161 aacctgcacg caggatggga acgacggtca atgttttgcc cttgatgcga tcgccttcaa
    53221 tctgaccgca ccatccgtcg ataaggtatt tttcgatttc aaaatcacgg cttgcctcgt
    53281 atgccatcag gcgcgccagc tcgatggcaa gcgtccggaa tttgtaggtg ctgcaatccg
    53341 cctccctcat cagggttaat ttgtggcgga cgagcggatg gttgataaca ttaacgttca
    53401 tcgcggtgtt ccagtgtgat tttgagacgc gccattatac ttttttttga tttgccggaa
    53461 aagaaaatgc cgtctgaaac acgttcagac ggcattgccg aatccatcag gctttcagca
    53521 gctcttgcag ctcgcctgcc tcatacattt ccatcaggat gtccgaaccg ccgacaaact
    53581 cgccgttcac ataaagttgg gggatggtcg gccagtcgct gtattcctta atgccttggc
    53641 gtacttcggg attttccaat acgttgacgg taacgtaatc ggtgcagccc gccgcgttca
    53701 ggatttgcac ggcgcgggaa gagaaaccgc attgcggaaa ctgcttcgta cctttcataa
    53761 acaatacgac gcggtgtgtc gttactactt ctttaatttg gtcgtggatg gaagccatcg
    53821 cttattcctt ttgataaagt tgacaaaatt tgtcaggtag gacgcattat acgcaaaagc
    53881 ggaaacttcc cacaatattt gccgtatatc gcgcagtatc aatgttgtga acggaaatat
    53941 tcccactcct cgacaatcct gctgtccggc tgtccggcaa atggcacagg gcatatccgc
    54001 cgccgctttc gtctttttta cttcccgtct gccgcctttg gcaatgcaga atttggaagc
    54061 ggaatttgcc atgcctgtcc gaaacgtgtt ggcaggcagc cggcagcagc gcggacatac
    54121 atacggatga attgccttca tggttttcct tatcgtcggc acagggtcag acggtccgca
    54181 tatcgggtac ttttttaaac agccggtaaa agttttccgt cgtgtatgcc gcaacctgtt
    54241 ccaatgtttg gttccgcaat ttggcgatat gttcggcggt atggcgcaca aaagccggtt
    54301 cgttctgcct gcctcgtttg ggaacggggg cgaggaacgg cgcatcggtt tccaccaaaa
    54361 tgcggtcgtc cggcacatat tttgccgcct cctgaaccaa gggtgcgttt ttaaaggtaa
    54421 cgattcccga gaaagaaata taaagcccca aatccattgc tgcacgggca aaaccgatgt
    54481 cttcggaaaa acagtggata acgcccgaat taacccggca ttctttcagg atagacaagg
    54541 tgtccgccgc cgcatcacgc gtatggacga taacgggcag tccggtttga ttggctgctt
    54601 cgatgtggtc tgcaaagcgt ttgtgttgcc aggacaaatc gcctttgcac cagtaataat
    54661 ccaaacccgt ctcgccaatg ccgaccactt tcggcgaggc ggctgcggca accatttccg
    54721 caatagaaaa ttcttcggct tccttgctgt cgggatgtac gcctattgtg cagtaaatat
    54781 gttcataaac ttcggcgata gcggatactt cggcaaaact ttccctgctg acgctgatgg
    54841 cgagcgcctg ccccacgccg tttgcttcca tgttggacaa aacttcgggc aggtgttctt
    54901 tcaaaccttc aaaattgagg tggcagtgcg aatcgatgat atgcatggcg ttacatggta
    54961 aacgtaggtc tgctgccgcc gattgtgttg cccagttcga cttcgatctg gtctttgact
    55021 ttcaggcagt tttcgtgttt tgtgaatgcc agccccaccc ctttgggttt ggaggaagta
    55081 cgcgcaggat tgatccaggc gactttggtc ggcaggaaca gtttggggaa gttgaggatt
    55141 tctacggcaa gcagaatatc gtccccgatg gaaaatacgt cgttggtctg cacaaacaga
    55201 ccgccgtgtt ccaaaaacgg catgtaggag ctgtacagca gattcatgtc tttcagctgc
    55261 aacgacatca tttttgccgg aatattttgt ccgtctgaca taattcaccc gttctctttc
    55321 ttcaattcca aatagttgat gagcagatgc tcgatctgca ttttgacatt taaagtatga
    55381 aacccgtagg gggcaagctg tttgagcata tcctccgccg caaatacatt gcgcaggcgg
    55441 aaaccggatg ccgtctgaag cagcctgtct tcataagcgg gataatagac gggtttcatg
    55501 tgttgcaggc acaatcccaa atcgaccagc catttctgca tccacccgac aaatacgtcg
    55561 agcggaagtt tctccttatc gaaaagcgcg gcgtaatcca aaatcttcaa caaccttggt
    55621 tctgccaaaa tatccaacag tttaatccgc aacgcacgga caccgtccgc ctcatcaaac
    55681 agcggcgctc cggaatggaa agccagacgt tcctcaggtt ccgccacacc cctttcacgc
    55741 agatatgcca atgcctcttc atgggaaggc gcgggcaaaa ccatcttccg gcagcggctt
    55801 ttaatggtcg gtaaaacctt gtccgccgcg tggctgacca gcaaaaagac cactcgtggc
    55861 ggcggctctt ccaacacttt caacaaactg ttggcggctt ggacattcat actttccgca
    55921 ggatgaatca gaatcacgcg caaaccgccc cgtaccgaag tcaggtacac attatcgatg
    55981 atttccctga cggcatcgat tttgatctgc aacagtttgc gtccgttttc gggttcgtcc
    56041 gacaaggggg tgatttcgta aaaatcggga tggcttccct gtccaaacag atggcaggac
    56101 atacattcgc cacagggttt gcagcccggt gcaggggttt cgcacaacag tgccttcgcc
    56161 gcaaagcggg caaatgtagt tttccccgta tcttttttgc cggcaaacag ccatgcattg
    56221 ggacgacgct cccaatgttc cgcaatctgc cgccattgct cattatgcca cggataaatc
    56281 atttcaaacc atccgtccgg aaatccatac cgccatcaga gcagttccaa atcggggctg
    56341 gaactttgcg cgcggcggct gcgcaactgt accgccaaac gcaaatcgtg tgcggaatcg
    56401 gcatttttca atgcttcttg cagggaaata tcgccttttt catacaattg gtaaaggtgt
    56461 tgatcgaagg tctgcatacc cagggtagtg gattttttca tcacttcttt gatttcatgg
    56521 atgttgccgt tgtgaatcaa ctccgaaatc aggggcgaat tgagcagcac ctcgactgcc
    56581 gccaccctgc ccttgccgcc gtctcgcgga acgaggcgtt gcgaaataaa cgcctgaagg
    56641 ttgagcgaca aatccgtcag caattgttcg cgccgctcct cggggaaaaa gttgatgatg
    56701 cggtcgagtg cctgattggt gctgttggcg tgcagcgtcg ccatacacaa atgccccgtt
    56761 tcggcaaagg caatggcgta gtccattgtt tcgcggtcgc ggatttcgcc gataaggatg
    56821 acatccggcg cctgacgcag cgtgtttttc aacgccgcca tccagttttc cgtatccacg
    56881 ccgacctcgc gctgggtgat gatgcagttt ttgtgttcgt ggacaaactc gatcgggtct
    56941 tcgatggtga tgatgtgtcc gaacgaattt tcattgcggt aatcgataag cgaggcaagc
    57001 gaagtcgatt tgcccgagcc ggtgccgccg acaaaaataa ccagcccgcg ttttttcagc
    57061 gcgacatcct tcaagaccgg cggcaggttc aggctttcaa acttgggaat cttgctggta
    57121 atcgcacgga ataccaacgc cgtcgcgccg cgctgtatca tcgcattgac gcggaagcgg
    57181 ctggtgtccg gcaggctgat ggcgaagttg cactcgttgg tcgatgaaaa ttcttccgcc
    57241 tgcttcgcac tcataatcga aaaggcgatt tccatacatt tttccgccgt cagcggttcg
    57301 tccgtgatgc gggtgatttt gccgtccagc ttcattgcgg gcgggaaatg ggtcgtcaca
    57361 aacaggtcgg aacctttgtt tttgttcata tggcgcagcc atgcgaacag ttcttccttt
    57421 gcggtcatat tttcatcggt aaacatcctc gtcccctaat cttcaaacaa tctgtacctt
    57481 cccattctac caaaaacccg ccgtgccgtc tgaaaccgtt tcagacggca cggacaaacc
    57541 gcccccactc aatcctgccg tgttagcgtg tataatccgg cattctatcc gaaattcaca
    57601 acaggtcagc aatatgtctt tgaaaacagt agccgttatc ggcgcaatgg aacaagaaat
    57661 caagcttttg cgcgagatga tggaaaatat caaagccgtc tctttcggca gattttccgc
    57721 ctatgaaggc gaattggtgg gaaaacgcat ggtgcttgca ttgagcggca tcggcaaggt
    57781 caacgcggcg gttgcaacgg cttggcttat ccatcaattc gcaccggact gcgtcatcaa
    57841 caccggcagc gcgggcggtt tgggcaaggg tttgaaagtc ggcgacgtag tcatcggtac
    57901 ggaaaccgca caccacgatg tcgacgtaac cgcattcggc tatgtttggg gacaagtgcc
    57961 gcaactgccg gcaaggtttg cttcagacgg cattttgatt gaggcggcaa aacgggcggc
    58021 gcggacgttt gaaggcgcgg cggtagaaca aggcctgatt gtcagcggcg accgcttcgt
    58081 ccacagcagc gaaggcgtgg cggaaatccg caagcacttc cccgaagtta aggcggtaga
    58141 aatggaagcg gcggcaatcg cccaaacctg tcatcagttg gaaacgcctt tcgtcatcat
    58201 ccgcgcggtt tccgattcgg cagacgaaaa ggcagacatc agctttgacg agttcttgaa
    58261 aacggcggcg gcaaattccg caaaaatggt ggcagaaatc gtcaaatctt tataaaacct
    58321 ttatcaaatc atgccaaaac agcggttttc cgttagaata tcgggctatt tccacgttgc
    58381 gcccgatatt tggacgtacc gctgtttgtt cagacggcat ttctaaaacc taccgttcag
    58441 cattaaaaac aactcaatga aaaatatccg aaatttctcc atcattgccc acatcgacca
    58501 cggcaaatcg acgcttgccg accgcttcat ccaatattgc ggcggtttgg atttgcgcga
    58561 aatgagtacg caggtactcg attccatgga catcgaaaaa gagcgcggca ttaccattaa
    58621 agcgcaaacc gccgcgctca actataaagc acgcgacggg caggtgtatc aactcaacct
    58681 gattgacacg ccgggacacg tcgacttctc ttacgaagtc tctcgttcgc tctctgcctg
    58741 cgaaggcgcg cttttggtcg ttgacgcgtc gcagggcgtg gaagcgcaaa ctgtggcgaa
    58801 ctgctatacc gcgattgatt tgggcgtgga ggttgtgcct gttttaaaca aaatcgacct
    58861 gcccgccgcc gaccccgaac gcgtggaaca agaaatcgaa gacattatcg gcatcgatgc
    58921 cgtcggtgcg gtgcaatgtt ccgccaaaag cggcatcggc gtggaagacg ttttagaaga
    58981 aatcgttgcc aaaatccctg cgccgaccgg cgacgaaaac gcgccgctgc aagccgtgat
    59041 cgtcgattcg tggtttgaca actatgtcgg cgtggtcatg ctgattcgag tgaaaaacgg
    59101 caccatcaaa ctgaaagaca aagtgcgctt tatgagcacc aaggcggaaa cgcaggtcga
    59161 gcagctgggc gtattcacac caaaatcagt tcaaaaacaa gaactcaaag ccggcgaagt
    59221 gggctttttg attactggcg taaaagaatt gggtcaggcg aaagttggcg atacggttac
    59281 actggttgcc aaccctgcca ctgagccgct gcccggcttc caagaagtac aaagccaagt
    59341 attcgccgga ctttatcccg tggaaagcca cgactacgaa gccttgcgcg acgctttgga
    59401 aaaattgcag cttaacgacg cttcgttgaa attcgagcct gaagtttccc aggcattggg
    59461 cttcggcttc cgttgcggct tcttgggtct gctgcacttg gaaatcgtgc aggaacgttt
    59521 ggagcgcgag ttcgacatgg acttgattac caccgcgccg acggtggttt acgaagtcgt
    59581 gttgaaaaac ggtgagaaaa tcgaagttga aaacccgtcc aaactgcccg acatcggcag
    59641 catcgaaacc atactcgagc cgattattac cgcgaccatc ctcgtgccgc aggaatacgt
    59701 cggcaacgtc atgactttgt gtaaccaaaa gcgcggcgtt caggtcaata tgcaatatat
    59761 gggccgccaa gtcatgctga cttacgattt gcccatgaac gaagtcgtca tggacttctt
    59821 cgacaaactc aaatccactt cgcgcggtta tgcttcgttg gactaccatt tcaaagagtt
    59881 ccaaccgtct gatttgatta agctggatat catggtcaac ggcgaaaaag tcgatgcctt
    59941 aagcctgatt gtgcaccgtc aaagcgcggt tcaccgaggc cgcgagctgg catcgaaaat
    60001 gcgcgagctg attccgcgcc aaatgttcga cattgccgtc caagccgcca tcggcagcca
    60061 gattatcgcc cgcgaaaacg tcaaagcact gcgtaaaaac gtcttggcga aatgttacgg
    60121 cggcgatatt acgcgtaaga aaaaactgct tgaaaaacaa aaggcaggta aacgccgtat
    60181 gaaacaagtg ggcaatgtgg aaatcccgca aagcgcgttc ttggcgattt tgcaggtgag
    60241 cgacaaataa tatttcggca catagggcgg cgcgtcggga acacctctca aaccgccctg
    60301 atttcagggg cacgcgcccg caaacaaatt ttgcaatttg ccgccttaaa acggttgcac
    60361 ggccgggcgg gtttttaacc gttgaggaac aacaatgaac acaatgctaa tgtcgggcgc
    60421 ggctgccgcg ctgcttgccg gcatcatcct ttatttcaaa agcgacaaga agcggcagga
    60481 aaacggtgaa tggagttccg gcctcgaata cgcctatatc ctgacggcgg tcggcgtgtt
    60541 tgccgctttg tccctgttta tgagctttgc cgccgttttc ctgattttcg ttgtattgtg
    60601 cggtacggct tgggcggtat acaaataccg cctgaagact catcccgaaa tctcggaaag
    60661 cagccacttc ggcgattatt tcggcagttt cttccctacc gttttggtat tgttcctcat
    60721 ccggtcgttt attgccgaac cgttccaaat cccgtccagc tcgatgcgcc cgggcctgat
    60781 taagggcgat ttcattttgg tcggcaaatt ttcctacggt ctgcgcgtac ccgttttaaa
    60841 caatatattt attcctacag gcaaaatcga acgaggcgat gtcgttgttt ttaattatcc
    60901 tctgcagccg gagatgacct acatcaagcg tattgtcggc attccgggcg atgtggtcga
    60961 atatcgggat aagattttga cggtaaatgg caaacccact tccgatattc ctaacggcac
    61021 ataccgttat cccgacgaca ccgacccttc cgaaatccac aacacggata tgttccgcag
    61081 cgatctggac ggcaaatcct tcaatattct gaaaaaagaa ggacagcctg ccgtttccct
    61141 gcccgtattg ggcaaatata cctccgatat tatgtctgaa aacggatatt ccatagagca
    61201 aagcggtttg gaacactgcc aatatgccga cgacggcagc ggtttcgtgt gcaaagttcc
    61261 cgaaggacgc tatttcgcta tgggcgacaa ccgcgacaac agtgccgatt cgcgctactg
    61321 gggatttgtg gatgacaagc tggttgtcgg caaggcaatg ttcattttga tgaacttcgg
    61381 cgatttcggc aggtccggta cggcaatccg ttaggccgga aaattacgcc ggaacatcaa
    61441 aaatgccatc cgaaccctgt ttcagacggc atttttatca tcaaacgcct tgtttccctg
    61501 ccggcagcct cggggataat atagtggatt aaatttaatc cactatattt ccgtttgtgt
    61561 ggaaacccat cccattgaat aaagggcatt tcgtccgact gacggtgtgg gcggcatatg
    61621 gaaatacgga cattatttta gttgcattgc cattccagcg gaggcggctt ttttgattct
    61681 gcccgccccg atgccgtctg aaagggcttc agacggcatt ttccgctccg cgccgttgct
    61741 ggcgtgtttg gtcttgccgg ttttgactgc ctgccagttc aatcgtacgc aggtttgcca
    61801 cggcagaaaa tctgatgccg gacggagtca aggctcggac tgctgtttca gcgaaccgag
    61861 gtaaattgcc gaaagcgtca gcgccacccc tgcccactgc acgccttcaa tcggtttgcc
    61921 caacccgaaa taatcgatga acagggcggc aaccggttcg gacaaaagca gcagccccgt
    61981 cagcgacagc gaaagcagcg gaatcgcata ggcaaccatc gcccacgcga agcactgcat
    62041 caccacgccg tacacaagca ccaaacccgc atctttccaa gtcgtcggat aaagcacgcc
    62101 gccatccatc agcaatgccg gaacaaccag cgataccgcg ccgcccaaac tcaaaatcat
    62161 cattgaaggg aaaagcgcca ccggctcgat ttcatgggtt ttgcggacga acaccatcga
    62221 cagggcgagc atcagtcccg ataccaaacc gctggcgaat ccccaaaccg cattaccgtt
    62281 gtagccgaat tccgcaccgg caatcatcgc cacgccggca actgccgata ttaagcctgc
    62341 ctttttcagc ccgctcaaac gttcgttaaa aaagaaaaca ccgattgccg acaagaaaaa
    62401 gatttgcagg ctgttgagca gggtggaaat acccggcccg accgcgtgta tgctttcgtg
    62461 ccacaacgcc aaatcgaaag cgaggaacac gcccgccgtc agggcatatc ggacggtttt
    62521 cctgtttttt gggaattttt gcccgaaaaa ccgtgccaaa aaccaaaata cgaacaccga
    62581 aatcagcaac cgccaaaatg cgattgcata cgggccgacg gggacggacc tgacaatcag
    62641 actgcccaga ccgaacacca cgcaacccag caccagcaat ggtgcggcat attttttgcc
    62701 gttaccgacc acaatatccc ctcccttccc catacggctg ccgcgccgac ggcaagaatg
    62761 ccgccattcc gaaaatatgc cgtctgaagc ccaaagcccc ggctgcaccc ggacaaacgg
    62821 ctgattttac gggcaggccg actattttcc gttggggcaa aaaaccgtcc tgccagataa
    62881 aaccc
//
LOCUS       DBBZYD010000002        47673 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.002, whole genome shotgun sequence.
ACCESSION   DBBZYD010000002 DBBZYD010000000
VERSION     DBBZYD010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 47673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47673
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.002"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            427..1359
                     /gene="pip"
                     /locus_tag="ACJJDL_000068"
     CDS             427..1359
                     /gene="pip"
                     /locus_tag="ACJJDL_000068"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HGG7572873.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKSWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGNRAILNNIGKIRHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLVDALVQAVEDILPHLL"
     gene            complement(1416..2612)
                     /gene="bamC"
                     /locus_tag="ACJJDL_000069"
     CDS             complement(1416..2612)
                     /gene="bamC"
                     /locus_tag="ACJJDL_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HGG7572874.1"
                     /translation="MPSEAFRRHNATNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGDKNKDTTMWQPSASDPNLEAAFLTRFMQYLGVDGQQAENALAKKPTLPAAN
                     EMARIEGKSLIVLGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2621..3496)
                     /gene="dapA"
                     /locus_tag="ACJJDL_000070"
     CDS             complement(2621..3496)
                     /gene="dapA"
                     /locus_tag="ACJJDL_000070"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HGG7572875.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRIPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWALSALGKCGPHVRLPLVPLTED
                     GQAKVRAALQAAGQL"
     gene            complement(3688..3798)
                     /locus_tag="ACJJDL_000071"
                     /pseudo
     CDS             complement(3688..3798)
                     /locus_tag="ACJJDL_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            3909..5300
                     /locus_tag="ACJJDL_000072"
     CDS             3909..5300
                     /locus_tag="ACJJDL_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HGG7572876.1"
                     /translation="MSGQLGKGADSPDLVYGLEERPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPIGSGMLSIQSVNFSFVTV
                     MIVLGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
     gene            complement(5362..6114)
                     /gene="rlmB"
                     /locus_tag="ACJJDL_000073"
     CDS             complement(5362..6114)
                     /gene="rlmB"
                     /locus_tag="ACJJDL_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HGG7572877.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGDSDLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(6180..6668)
                     /locus_tag="ACJJDL_000074"
     CDS             complement(6180..6668)
                     /locus_tag="ACJJDL_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HGG7572878.1"
                     /translation="MTALLVILALILLAVGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILTDYVAGIWGTKYSGAGRLAVRGALAGSIIGMFFSLPGL
                     ILAPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            complement(6673..7392)
                     /gene="tadA"
                     /locus_tag="ACJJDL_000075"
     CDS             complement(6673..7392)
                     /gene="tadA"
                     /locus_tag="ACJJDL_000075"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HGG7572879.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPHEMSQAHKACLLAELKNHPPVAAFPPQEEMEHFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIAAAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIKRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRIVLNRFFQNKRKG"
     gene            complement(7396..8337)
                     /gene="miaA"
                     /locus_tag="ACJJDL_000076"
     CDS             complement(7396..8337)
                     /gene="miaA"
                     /locus_tag="ACJJDL_000076"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HGG7572880.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSASERAFVPHHLIDIIPPTESYSAARFVEDCTRLVGEISSRGRFALIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETAYRLKPNDSQ
                     RIGRALEVYYLTGRPMSAHLNGLPEHTLPFELYTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTSDSPAIRCVGYRQAWEHLDGATDRQTFIEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSGTRLIEAAKRFFGA"
     gene            8691..8969
                     /locus_tag="ACJJDL_000077"
     CDS             8691..8969
                     /locus_tag="ACJJDL_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572881.1"
                     /translation="MFRNLLVRWLAVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKHQTMFLFIPIVLLVVYLFHYFGAF"
     gene            8988..10139
                     /gene="earP"
                     /locus_tag="ACJJDL_000078"
     CDS             8988..10139
                     /gene="earP"
                     /locus_tag="ACJJDL_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HGG7572882.1"
                     /translation="MNTYAFPVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWT
                     DDVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDAVIETFACDLPENVLH
                     IIRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYCE
                     AVRFDSEALRQRLMLPEKNAPEWLLFGYRSDVWAKWLEMWQQAGSPMTLLLAGTQIID
                     SLKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVR
                     AQLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETASAHRRLSDDLNGGEALSA
                     TQRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            10182..10742
                     /gene="efp"
                     /locus_tag="ACJJDL_000079"
     CDS             10182..10742
                     /gene="efp"
                     /locus_tag="ACJJDL_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HGG7572883.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(10792..11628)
                     /locus_tag="ACJJDL_000080"
     CDS             complement(10792..11628)
                     /locus_tag="ACJJDL_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
                     /protein_id="HGG7572884.1"
                     /translation="MKNKTSSLLLWLTAIMLTACSPNKNDKTKEVGASAASSSASSAS
                     SQSDLQPAASAPDNVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALSHHE
                     LETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDALME
                     QERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQL
                     PGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLG
                     RR"
     gene            complement(11745..12326)
                     /gene="metW"
                     /locus_tag="ACJJDL_000081"
     CDS             complement(11745..12326)
                     /gene="metW"
                     /locus_tag="ACJJDL_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HGG7572885.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTSNRQVKHFPNLLGSLAFYRVG"
     gene            complement(12323..13462)
                     /locus_tag="ACJJDL_000082"
     CDS             complement(12323..13462)
                     /locus_tag="ACJJDL_000082"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HGG7572886.1"
                     /translation="MSQNASVGIVMPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPLVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            13612..13812
                     /locus_tag="ACJJDL_000083"
     CDS             13612..13812
                     /locus_tag="ACJJDL_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572887.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRALREVAEISAWVLLG
                     AAAAMLFWYLFMLYFKHIPDSY"
     gene            complement(14024..14149)
                     /gene="ykgO"
                     /locus_tag="ACJJDL_000084"
     CDS             complement(14024..14149)
                     /gene="ykgO"
                     /locus_tag="ACJJDL_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HGG7572888.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(14149..14424)
                     /locus_tag="ACJJDL_000085"
     CDS             complement(14149..14424)
                     /locus_tag="ACJJDL_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HGG7572889.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            14624..15502
                     /gene="metF"
                     /locus_tag="ACJJDL_000086"
     CDS             14624..15502
                     /gene="metF"
                     /locus_tag="ACJJDL_000086"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HGG7572890.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15640..17916
                     /gene="metE"
                     /locus_tag="ACJJDL_000087"
     CDS             15640..17916
                     /gene="metE"
                     /locus_tag="ACJJDL_000087"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HGG7572891.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQVAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTGFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLSKVNAKILLSTYFGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKNQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARSAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTRKLRAELAK"
     gene            18195..18932
                     /locus_tag="ACJJDL_000088"
     CDS             18195..18932
                     /locus_tag="ACJJDL_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HGG7572892.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LQFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            19181..20584
                     /locus_tag="ACJJDL_000089"
     CDS             19181..20584
                     /locus_tag="ACJJDL_000089"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7572893.1"
                     /translation="MKKIQADVVVLGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDSFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAS
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            20863..21240
                     /gene="sdhC"
                     /locus_tag="ACJJDL_000090"
     CDS             20863..21240
                     /gene="sdhC"
                     /locus_tag="ACJJDL_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HGG7572894.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            21234..21575
                     /gene="sdhD"
                     /locus_tag="ACJJDL_000091"
     CDS             21234..21575
                     /gene="sdhD"
                     /locus_tag="ACJJDL_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HGG7572895.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            21578..23341
                     /gene="sdhA"
                     /locus_tag="ACJJDL_000092"
     CDS             21578..23341
                     /gene="sdhA"
                     /locus_tag="ACJJDL_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HGG7572896.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            23462..24169
                     /locus_tag="ACJJDL_000093"
     CDS             23462..24169
                     /locus_tag="ACJJDL_000093"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HGG7572897.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITSERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            24173..24421
                     /locus_tag="ACJJDL_000094"
     CDS             24173..24421
                     /locus_tag="ACJJDL_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HGG7572898.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            24533..25816
                     /gene="gltA"
                     /locus_tag="ACJJDL_000095"
     CDS             24533..25816
                     /gene="gltA"
                     /locus_tag="ACJJDL_000095"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HGG7572899.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            26021..28849
                     /locus_tag="ACJJDL_000096"
     CDS             26021..28849
                     /locus_tag="ACJJDL_000096"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HGG7572900.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDTVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVVGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            28949..30130
                     /gene="odhB"
                     /locus_tag="ACJJDL_000097"
     CDS             28949..30130
                     /gene="odhB"
                     /locus_tag="ACJJDL_000097"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HGG7572901.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAESGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLD
                     L"
     gene            complement(30182..30298)
                     /locus_tag="ACJJDL_000098"
                     /pseudo
     CDS             complement(30182..30298)
                     /locus_tag="ACJJDL_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            30495..31928
                     /gene="lpdA"
                     /locus_tag="ACJJDL_000099"
     CDS             30495..31928
                     /gene="lpdA"
                     /locus_tag="ACJJDL_000099"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7572902.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDVKFDVAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELLTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            32023..32310
                     /locus_tag="ACJJDL_000100"
     CDS             32023..32310
                     /locus_tag="ACJJDL_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572903.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            32364..33575
                     /gene="sucC"
                     /locus_tag="ACJJDL_000101"
     CDS             32364..33575
                     /gene="sucC"
                     /locus_tag="ACJJDL_000101"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HGG7572904.1"
                     /translation="MEANSGHYTNLKEKSMNLHEYQAKELLAGYGLPVQGGILAHNGE
                     EAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTD
                     ANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKI
                     FKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLA
                     VRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIG
                     CMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLINI
                     FGGIVRCDMIAEAIVAAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLND
                     AAEKIVAAVNA"
     gene            33586..34476
                     /gene="sucD"
                     /locus_tag="ACJJDL_000102"
     CDS             33586..34476
                     /gene="sucD"
                     /locus_tag="ACJJDL_000102"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HGG7572905.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(34716..35039)
                     /locus_tag="ACJJDL_000103"
                     /pseudo
     CDS             complement(34716..35039)
                     /locus_tag="ACJJDL_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(35011..35154)
                     /locus_tag="ACJJDL_000104"
     CDS             complement(35011..35154)
                     /locus_tag="ACJJDL_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572906.1"
                     /translation="MARYRRNFIAGGTFFFTVKLADPKSRLLVEHIGFAYGLYGCAKT
                     ISL"
     gene            complement(35440..36642)
                     /locus_tag="ACJJDL_000105"
     CDS             complement(35440..36642)
                     /locus_tag="ACJJDL_000105"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7572907.1"
                     /translation="MLIPQTSLFDQENNRIISQRKLLEQSLLQGIPLNELIRQNQMSY
                     DDLIYIHHDKKPFEKRKNLVLSDFQKKENHIPIISFFSGAGGLDLGFEAAGFQHSMLI
                     EKIPLFCDTLRLNRPNWSVFNADVSETEEMVELIRNNIGSLSFDGVFIGGPPCQPFSI
                     ASNQRFSKTDKNFKRVGFEHKQNGNLLFNYVELIKIFRPKVFLIENVSGLMDIDNGKQ
                     LASVYCDLQQQGYSLYKPQIINSEYFHVPQQRIRLFIIGYLGDKKFSPLQPTNTPLAC
                     GNTFEIPIINQHNHITREHSAESILRYMELAYGQRDKKGRVDRLDPSKPSKTIIAGGT
                     KGGGRSHLHPYIPRTLSVRESARLQTFPDDYIFTGAVARQFTQVGNAVPPILAAQLAT
                     AIKHSYFE"
     gene            complement(36655..37839)
                     /locus_tag="ACJJDL_000106"
     CDS             complement(36655..37839)
                     /locus_tag="ACJJDL_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7572908.1"
                     /translation="MIEWRFDQGRLDYFRFDEIKKIAKGLYGINQCPKPRAKDIDIVR
                     LSLTQETNLPFAPNSSQYPVWRNYGRVFKCLLLATEHNGLICTTDLCADLVQNDEISC
                     DDYLLHFATHFSYPSPAFSGYQPSENRVFPVLAIIRALISKYKETGVNFLDMDEIIYK
                     IASNNSITGIASFSFSQLIMNKEAIKYDPRQIRELVKFISQFSFLSWYENKLFLDITD
                     FSELHLLENQFIADTQPQERLDSLEIMRLGKTNNNFLLMNEIVSLSIDDQAFSEGGKI
                     KVTHLITERNSILRKIYFSKTQNAQICRMCGLDTQRSYEWSEHIIEVHHLLPLSSPVR
                     VEDKTTSLKDLVGICPTCHRATHKYYTFWLNLHKKKDFVSYEEAYHVYEEAKSKVKRI
                     YK"
     gene            complement(37881..40730)
                     /gene="uvrA"
                     /locus_tag="ACJJDL_000107"
     CDS             complement(37881..40730)
                     /gene="uvrA"
                     /locus_tag="ACJJDL_000107"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HGG7572909.1"
                     /translation="MCNHHPQHSHDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKANIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDSEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQ
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSITGQYLSGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDSGGRIIAQGSPEEVAKVKGSYTGKYLKVVLG"
     gene            40885..41682
                     /locus_tag="ACJJDL_000108"
     CDS             40885..41682
                     /locus_tag="ACJJDL_000108"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HGG7572910.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLTAP
                     QIESEPESEPALQTAPVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            complement(41827..41934)
                     /locus_tag="ACJJDL_000109"
                     /pseudo
     CDS             complement(41827..41934)
                     /locus_tag="ACJJDL_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(42905..45181)
                     /gene="znuD"
                     /locus_tag="ACJJDL_000110"
                     /gene_synonym="tdfJ"
     CDS             complement(42905..45181)
                     /gene="znuD"
                     /locus_tag="ACJJDL_000110"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HGG7572911.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHETEQSVDLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     NKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSRADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDNAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPFPGFEALRVYLNRNDYRHDEKAGDAVENFFKNKTQNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSATSEAVKQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGKRPFIAQADQNAPRVPAARLGVHLKASLTDLIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            45603..46193
                     /locus_tag="ACJJDL_000111"
     CDS             45603..46193
                     /locus_tag="ACJJDL_000111"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HGG7572912.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRDNLPDCLEITAWTDDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            46256..47314
                     /gene="trpD"
                     /locus_tag="ACJJDL_000112"
     CDS             46256..47314
                     /gene="trpD"
                     /locus_tag="ACJJDL_000112"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HGG7572913.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMRGQVLPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQIAQSISQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLDGKEGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(47371..47673)
                     /locus_tag="ACJJDL_000113"
                     /pseudo
     CDS             complement(47371..47673)
                     /locus_tag="ACJJDL_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684347.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT        11346 a        11450 c        12752 g        12125 t
ORIGIN      
        1 gaattttcaa tgcctcaaga atttatcgga aaaaaccaaa acccttccgc cgtcattccc
       61 acgaaagtgg gaatctagaa atgaaaagca gcaggaattt atcggaaatg accgaaattg
      121 aacggactgg attcccgctt ttgcgggaat gacggcgaca gggttgctgt tatagtggat
      181 gaacaaaaac cagtacggcg ttgcctcgct ttagctcaaa gagaacgatt ctctaaggtg
      241 ctgaagcacc aagtgaatcg gttccgtact atctgtactg tctgaggctt cgccgccttg
      301 tcctgatttt tgttaattca ctatatcgcg atttttcggc atttgccttt cggggcggct
      361 tgtgtctcgt gcgtgatgtt gcgtgtggga atgttcggat tatcagaagc aatatgggag
      421 aagatgatgt atgagataaa acagcctttt catagcggat acttgcaggt gtctgaaatt
      481 catcaaattt attgggagga atcgggcaat cccgacggtg tgccggttat ttttttacat
      541 ggcgggccgg gcgcgggggc ttcgcctgaa tgtcggggtt tttttaatcc cgatgtgttc
      601 cgcatcgtca tcatcgacca gcgcggttgc ggacgttcgc gcccgtatgc ttgtgcggaa
      661 gacaatacga cttgggattt ggtggcggat attgaaaaag tccgtgaaat gctgggtatc
      721 gggaaatggc tggtgttcgg cggttcgtgg ggcagcactt tgtcgctggc ttatgcccaa
      781 acccatccgg aacgggtaaa gggattggtg ttgcgcggga tatttttgtg caggccgtct
      841 gaaacggcgt ggctgaacga ggcgggcggt gtgagccgga tttatccgga acaatggcaa
      901 aaatttgtcg cgccgattgc tgaaaatcgg cggaaccggc tgattgaggc gtatcacgga
      961 ttgctgtttc atcaagatga agaagtgtgc ctgtctgccg cgaagtcttg ggcggattgg
     1021 gaaagctatc tgatccgttt cgagccggag gaagtggatg aagatgctta tgcctcgctg
     1081 gcaatcgcgc gtttggaaaa ccattatttt gtcaacggcg gttggttgca gggcaatagg
     1141 gcgattttga acaatatcgg caaaatacgg catatcccga ccattatcgt gcaggggcgg
     1201 tatgatttgt gtacgccgat gcagagtgcg tgggcgctgt cgaaagcctt tcccgaagcg
     1261 gaattgaggg tggttcaggc agggcatcgt gcgttcgatc cgcctttggt ggatgcgttg
     1321 gttcaggcag ttgaggatat tttgccccat ttgttgtaaa aagttccgca taaaaaagca
     1381 gcttctgttt ggaagctgct tttgttttga atggtttaac gcagttcgga atggagtttg
     1441 cccaataatg cggatgcgtc tttgccggca tatgcgctgc cgtctttgtt gagcaggacg
     1501 atgcgcgagc cgttggcgac aggctcggca tagacaatca gttccggctg ttcggcaggt
     1561 ttctccgctt tgcctttgcc cagcaggcgt ttgaacaggc cgggtttttg ttcggtaact
     1621 gcattgcttt cgttcggggc tttttgaacc aggaaagcgt ggcgttcggt gttttgaccg
     1681 acgacggtca gcccgatgcg gtcgagggcg agcgcggtgc gccgccagtt tctgccgtag
     1741 tcgcctaaga caatcaggct tttgccttcg atacgcgcca tttcgttggc ggcgggaagg
     1801 gtcggttttt ttgccaatgc gttttccgcc tgctgtccgt caacgcccaa atattgcata
     1861 aagcgcgtca ggaatgccgc ttcgaggttg gggtcggaag cggaaggctg ccacatggtc
     1921 gtgtctttgt ttttgtcgcc atacacttct ttcatcgctt tgtgggcgaa gaagatgtcg
     1981 gaaacgccgt ttttgccctg ttcgatacgg acgatgaatt tgtcgcgctc gccggtggag
     2041 tagatgccgc ccaaaccgac tgtgtcgaat aggcggcgca agctgtcttg ggggattttg
     2101 gcacggtttt ccgcccactc ggtttccatt tgtccgatgg cgggttcttc ggatttgatg
     2161 tcgaagccgt tttcctgcca aaaggctttt aggagcggcc agatttcggc gggggatttg
     2221 ccgtcaacga cgagccagcg ttggctgccg tcgcgctcga ggcggacacc tttgacgctt
     2281 ttcaatactt cggcatcggc aggctgttgg acggcgggtg tgcggcgttt ttccaaatcg
     2341 ctggcgcgga cggctcccga accggcaggc aggcggtaga ggttgccttg gtcgggattg
     2401 ttcaaatcgg gcgggacttc gagtttgatc aggcggtgcg accggctttg gtagtcgagc
     2461 ttgggctgtt cggttttgct gccggagcag gcggcaagcc cgatgagtgc gagcgcggca
     2521 atgacgggtt tgatatgggt catcgtgtca tcctgtgtga tggatattaa agtgtttgtt
     2581 gcgttatgcc gtctgaacgc ttcagacggc atagctatat ttaaagttgt cctgcggctt
     2641 gcagtgcggc gcggactttt gcctgtccgt cttccgtcag aggaacgagc ggcaggcgga
     2701 cgtgcggccc gcatttgccc agtgccgaca atgcccattt cggcgcggcg gggctgggtt
     2761 cgcagaacat ggtgtcgtaa atcggaatca gccggtcgtt gagttcgcgt gcgagggcaa
     2821 tgtcgccttg cagcgcggcg cggcacatat cggcaaagag tttcggggcg gcgttggcgg
     2881 ctacggtaat aacgccgtgt ccgccgcaca gcatgaacgg cagggcggta tggtcgtcgc
     2941 cggaaaggac gacgaagcct tcgggcgcgc ggttgatgag ttcgatgttg ctgccgatgt
     3001 tgccgctggc ttctttcacg ccgacgatgt tggggatttc ggcaaggcgc aggatggttt
     3061 cgttgttcat gctgacgacg gttctgccgg gcacgttgta gagtatcatc ggaatcgcgg
     3121 cggcttcggc aacggctttg aaatggcggt acatgccttc ttgcgaaggt ttgttgtagt
     3181 aggggacgac ggagagggtg taatccgccc cggctttttc ggcggcttgg gaaagggcga
     3241 tggcttcgac ggtgttgttc gcccctgtgc cggcgatgac ggggatgcgt ttggcaacgt
     3301 gtttgacgac ggcttcgatg acggcggtgt gttcttcgac ggaaagcgtg gcggactcgc
     3361 ctgtcgtgcc gacggcgacg atgccgtccg tgccgttttc aatgtgccag tcgattaagt
     3421 cgcggagttg ttcgtaatgg atgctgccgt cttgattcat cggggtaatc agggcaacca
     3481 ggctaccttg taacatacag aaccttttat cagttgtggt gtagggggcg gtaatgcttc
     3541 cgattgtagc ctactttacc gcaggtgtga aatccggcgg gttgcggatg tggggcgttt
     3601 gcgccgaaag gtatggggga aattgatttt tcctgttgga aatcatttta ttatgtttgc
     3661 cggtttatgc cggtgctgtc ggatttatag tagattaaat ttaaaccagt acggcgttgc
     3721 ctcaccttgc cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttaaatt
     3781 taatccacta taaaatgtgg taagcgtgtg ggacaggcgg atgccgtctg aaatgcaaat
     3841 tgaagccgtg cggcagattc gctacaatcc gcgcttggat ttttcaacct ttaaaataag
     3901 gaaatacaat gagcggtcag ttgggaaaag gtgcggattc gcctgatttg gtgtacggtt
     3961 tggaagagag accgccgttc ggcaatgcgc tgttgagcgc ggttacccat cttttggcga
     4021 tttttgtgcc gatgattacg cccgcgctga ttgtgggcgg cgcgctggaa ttgccggtgg
     4081 agatgacggc atatctcgtg tcgatggcga tggttgcgtc gggtgtcggc acttatttgc
     4141 aggtcaaccg ctttgggccg atcggttcgg ggatgctgtc catccagtcg gtgaatttct
     4201 cgttcgttac cgtcatgatt gtgctcggcg cggggatgaa agagggcggt ttgactaagg
     4261 atgcgatgat ttcgacgctc ttgggcgtat cgtttgtcgg ggcgtttttg gtctgtttct
     4321 cggcgtggct tctgccttat ttgaaaaaag tgattacgcc gacggtcagc ggtgtggtgg
     4381 tgatgctgat cggcttgagt ttggtacacg tcggcattac cgatttcggc ggtggctttg
     4441 gcgcgaaggc ggacggcacg ttcggctcga tggaaaactt ggggctggcg tcgctggtgt
     4501 tgctgattgt gttgatattc aactgtatga aaaacccgct gttgcgcatg agcggcatcg
     4561 cggtcgggtt gattgccggc tacattgtcg cgctgttttt gggtaaggtg gatttttccg
     4621 cgctgcaaaa cctgccgctg gttacgctgc ccgtaccgtt taaatacggt tttgcttttg
     4681 actggcacgc atttattgtg gcgggcgcga ttttcctgtt gagcgtgttt gaggcggtcg
     4741 gcgatttgac cgcgacggca atggtgtccg accagccgat tgaaggcgaa gaatacacca
     4801 aacgcctgcg cggcggcgtg ttggcggacg gcttggtgtc ggtgattgcg acggctttgg
     4861 gttcgctgcc gctgacgacg tttgcgcaaa acaacggcgt gattcagatg accggcgtgg
     4921 cttcgcgcca tgtgggcaaa tatattgccg tgattttggt gctgttgggt ctgttccccg
     4981 ttgtcggacg cgcatttacg acgattccga gtccggtgtt gggcggcgcg atggttttga
     5041 tgttcggcct gattgcgatt gcgggcgtgc ggattttggt cagccacggc atccgcaggc
     5101 gcgaagcggt gattgcggca acgtcggtcg gtttgggctt gggcgtggcg tttgaaccgg
     5161 aagtgtttaa aaacctgccc gtcttgttcc aaaactctat ttccgccggc ggcattacgg
     5221 cagtcttgct gaatttggtc ttgccggaag ataaaaccga ggcggcggtc aagtttgata
     5281 ccgaccactt ggaacactga ttttgaaaac gaatgccgtc tgaaacggaa tccctgtttc
     5341 agacggcatt gtttttgagg cttacgcttt ttcgtttttt aatacgcgct gccggcgggt
     5401 ttcacttaat accattccgg cagacacgga gacgttcatg ctttcgaccg tgccgaacat
     5461 cggtatggac accagcatgt cgcaatgttc gcgcgtgagg cggcgcatac cgtcgccttc
     5521 gttgcccatt acccacgccg cgctgtcggg cagatcgcaa tggtaaaggt cggagtcgcc
     5581 gcccatatcg gtaccgataa tccagatgcc gtattctttc agctcgcgca gggtgcgggc
     5641 gaggttggtt acggtgatgt aggggacggt ttccgccgca ccgcaggcga ctttgctgac
     5701 ggtggcgttc agccccgcgc ttttgtcttt cggcgcgatg acggcatgta cgcccatcgc
     5761 gtcggcggta cgcaggcacg cgccgaggtt gtgcgggtcg gtgatgccgt cgagtatcag
     5821 caacagcggc ggttcgctta agttttccaa tacgtcttcg aggtggacgt ggtttttgga
     5881 ggcatcgata aatccgacca cgccctgatg gcgcgcgcct ttgctgatgg cgttgaggcg
     5941 gtcggcatcg gcaaaatata cgcggatgtt ttcgtttgca gccttttcca gcacttcgcg
     6001 cgtgcgtgcg tctgatttgc cttcttggat gtagagttcg acgatggatt tggggttttg
     6061 ccacaatcgg gcattgacgg cgtggaagcc gtagatgggt ctttggtttg ccataatggt
     6121 gtttgtcaaa aggtttcaga cggcattata gcaatttatc ctgatgccgt ctgaaggggt
     6181 taaaacaggt aggcgatgta tttcaccaat aaaataaaca ggatggagac ggcgcaaccg
     6241 attttgaacg ccgttccgac gacaagtccc aacagtgtac ccaagcctgc tttacctgcc
     6301 tgaagcatat tgcgccgatc gatcagttcg cctgccgccg caccgataaa gggagcgagt
     6361 attagtccgg gaagggagaa aaacataccg ataatgctgc cggccaatgc gccgcgaacg
     6421 gcgagcctgc ccgctccgct atattttgtc ccccatatgc ctgccacata gtccgtcagt
     6481 atgccggcaa ggctgatgag tccgaccgtc cacaaaacgc ccgcgccgta gatttgatag
     6541 ccgccggagt aggcaagcag ccaggttccg gcaaacatca atgccaatcc ggggagggca
     6601 gggtaaacga tgcctgccgt gccgacggca agcagaatga gggcgagaat gacgagtagg
     6661 gcggtcatgg gttcaacctt ttcttttgtt ctgaaaaaaa cggtttaaca cgatgcggca
     6721 ttcttcttgc aggattccgc cccgtatggc ggtgtgcgta ttgaggcgtt tgtcggcaaa
     6781 caggttgacg atgctgcctg ccgcgccggt tttgggttct gccgcaccgt atatcacgcg
     6841 cttgattcgt gcctgtatca gtgcggacgc gcacatggcg cagggttcga gggtgatgta
     6901 gatgtcgcat ccgtcaaggc ggtagttttg catttcgctg cctgcctgtg ccaaggcgtt
     6961 gatttcggcg tgccggctga cattgcagtc ggcaatgcag gtgttgtgtg ccgctgcgat
     7021 gattttgccg tctgaaacga tgactgcccc gacgggtatt tcgccgtcgg cggcggattg
     7081 ttctgcttgg cgcagtgctt cgcgcatgaa gtgttccatt tcttcctgcg gcggaaaggc
     7141 ggcgacgggc ggatggtttt tcaactcggc aagcaggcag gctttatgag cttgggacat
     7201 ttcgtgcggc ggcgtgccgt ccagcagcga ctgaagctgc cacagcgtgc ttttcgtgag
     7261 ggtcaaaccc gatgctttga gcagcagaaa ggctttgacc gaaccgtttt gccgcagttc
     7321 ttcgagcgta cggataccga gcctgtgcag ggcggcgacg gttttggggg cgagcggcgg
     7381 cgtggtcagc atagtttatg caccgaaaaa ccgttttgcc gcctcaatca ggcgcgtgcc
     7441 tgaagtgccg tctgaaaacg ggtcggcaac gcagtctaaa ggtgttttgc gcaaccaagt
     7501 cagttggcgt ttggcaagtt ggcgcgtggc ggcaatgcct ttttcgatga aggtttgtct
     7561 gtcggttgcg ccgtcgaggt gttcccacgc ctgacggtag ccgacgcagc ggatggcagg
     7621 ggagtcggag gtcaggctgg gatagaggcg gcgcaggttt tctacttcgc cgataaagcc
     7681 ctgttcaagc atcaggtgga aacgcagggc gatgttttca tgcaggcggg cgcggttttc
     7741 gggaatcagt gcggcggtgt agagttcgaa gggcagggtg tgttcgggca gtccgttcag
     7801 gtgcgcgctc atcggtctgc cggtcaggta atagacttca agggcgcgtc cgatgcgctg
     7861 gctgtcgttc ggtttcagac ggtatgctgt ttcagggtcg actttttgca gggtgcggta
     7921 gagaaaatcc aatccgtaca tttgtttttg ttcgtccaag tcggcacgca ggcaggcgtc
     7981 ggcttcgggc aaatcgttca aaccttgggt cagggcgcgg aaatacatca tcgtgccgcc
     8041 gacaataagg gcaaacctgc cgcgtgagga aatttccccg accaagcgcg tgcagtcttc
     8101 gacaaagcgg gcggcgctgt atgattcggt aggcgggatg atgtcgataa ggtggtgcgg
     8161 gacaaaggcg cgttcggagg cggacggttt cgccgtgccg atgtccatat cgcggtaaac
     8221 cagcgcggaa tcgaggctga tgatttcgac aggcagggtt tcggcaattt tgagggcgag
     8281 cgcggttttg cctccggcgg tcggcccgag cagggcaaag gctttcgggg tcggcataac
     8341 gtttcaggtt tggaaaaata cggattatag cggaaagcgt gccgacgtta tattttggtt
     8401 tgcggaagca cgccgacggc aagggggcgt gtttaccgta tgcctttata aaatttcaaa
     8461 ccgacgcgcc gggttttcaa tatgcccgcg cccgatgcag ccttgtcctc aggcatcggc
     8521 ggcagcgtcc gatttttcgg ggaacgcccg tctcgggcgt atttaaaggt tcggcggtgc
     8581 ggtgttttcc tgcggcaagg cttcagacgg catcgtcggc gcatccgtta gacaaggcgc
     8641 gtgcttgggg cgataatggc gttttgcttt ttttgtttga aagccttgcg atgttccgaa
     8701 acctgcttgt ccgctggctt gccgtctgcc tgataccctt ggcgacgctt gccgttttcg
     8761 ccgccaatcc gcccgaagac aaaccccagc atctgattaa cggcatcatc cttgcctgcg
     8821 aagcgacgtt tctgttcaaa ttcgtccttt tcgacaccat caagcatcat ttgaaacaag
     8881 agtttgattt gaaacatcaa actatgtttc tgtttattcc gattgttttg ctggttgtgt
     8941 atttgttcca ttattttggc gcattttagc ttgttttcta gatggttatg aatacatacg
     9001 cttttcctgt ctgttggatt ttttgcaagg tcatcgacaa tttcggcgac atcggcgttt
     9061 cgtggcggct tgcccgtgtt ttgcaccgcg aactcggttg gcaggtgcat ttgtggacgg
     9121 acgatgtgtc cgccttgcgc gcgctttgcc ctgatttgcc cgatgttccc tgcgttcatc
     9181 aggatattca tgtccgcact tggcattccg atgcggcaga tattgatacc gcgcctgttc
     9241 ccgatgccgt catcgaaact tttgcctgcg acctgcccga aaatgtgctg cacattatcc
     9301 gccgacacaa gccgctttgg ctgaattggg aatatttgag cgcggaggaa agcaatgaaa
     9361 ggctgcacct gatgccttcg ccgcaggaag gtgttcaaaa atatttttgg tttatgggtt
     9421 tcagcgaaaa aagcggcgga ctgatacgcg aacgcgatta ctgcgaagcc gtccgtttcg
     9481 atagcgaagc cctgcgtcag cggctgatgc ttcccgaaaa aaacgccccc gaatggctgc
     9541 ttttcggcta tcggagcgat gtttgggcaa agtggctgga aatgtggcaa caggcaggca
     9601 gcccgatgac actgttgctg gcggggacgc aaatcatcga cagcctcaaa caaagcggcg
     9661 ttattccgca agatgccctg caaaacgacg gcgatgtttt tcagacggca tccgtccgcc
     9721 tcgtcaaaat ccctttcgtg ccgcaacagg acttcgacaa actgctgcac cttgccgact
     9781 gcgccgtcat ccgcggcgaa gacagtttcg tgcgcgccca gcttgccgga aaacccttct
     9841 tttggcacat ctatccgcaa gacgagaatg tccatctcga caaactccac gccttttggg
     9901 ataaggcaca cggtttctac acgcccgaaa ccgcatcggc acaccgccgc ctttcagacg
     9961 acctcaacgg cggagaggct ttatccgcaa cacaacgcct cgaatgttgg caaatcctgc
    10021 aacaacatca aaacggctgg cggcaaggcg cggaggattg gagccgttat cttttcgggc
    10081 agccttccgc atccgaaaaa ctcgccgcct ttgtttcaaa gcatcaaaaa atacgctaga
    10141 atagcgcgtt ttacgacaac cgatttgatt ggaaaatcac aatgaaaaca gcacaagaac
    10201 tgcgcgccgg caatgtattt atggtcggca acgatcctat ggtcgttcaa aaaaccgaat
    10261 acatcaaagg cggccgctct tccgccaaag tcagcatgaa actgaaaaac ctgctgaccg
    10321 gcgcggcttc cgaaaccatt tacaaagccg acgacaaatt cgacgtggtc atcctgtccc
    10381 gcaaaaactg tacgtacagc tactttgccg acccgatgta cgtctttatg gatgaagaat
    10441 tcaaccaata cgaaatcgaa gccgacaaca tcggcgacgc gttgaaattc atcgttgacg
    10501 gtatggaaga ccaatgcgaa gttaccttct acgaaggcaa ccccatttct gtcgaactgc
    10561 ccaccatcat cgtgcgcgaa gtcgagtaca ccgagcctgc cgtcaaaggc gacacttccg
    10621 gcaaagtgat gaaaaccgcg cgcctggtcg gcggcaccga aatccaagtg atgtcttaca
    10681 tcgaaaacgg cgacaaagtc gaaatcgata cccgcaccgg cgaattccgc aaacgcgctt
    10741 gatttgttgc attgaaaaat gccgtctgaa aacgtttcag acggcatttt tttatcttcg
    10801 ccccaagttt ggattgaagt agatgttttt ttcgtaaacg acaatacgcg tgattttgcc
    10861 attttcgtca aaatggatgt ctaaaaacgg tttgtcggga ttgcgttcac ggttggacag
    10921 ccggaagagt gattggtttt caagcatttc tccgtgtatt ttcagatagc cgggcaattg
    10981 gccgatgtat tggaaattgc cgccaagtcc gttgttgtgc cggctcgaat aggcaggggt
    11041 tgccgaaact tcaaaataac gcgtgcgttt cggctcctcg ccttgtccgc gggtttcttg
    11101 actgccctgt atcagcaaca gcgtcgcttc tcggaggcgg cgttcctgtt ccatcaaggc
    11161 atcttgtgcc tgccggctga tcgtgcgctt tccgtaacgc aagtcttcaa ttgccagtat
    11221 gattttctga tggtagtcgg gatcttcagg gcggatgtcg ggaaacagca gccgctgtat
    11281 gttgtcatag ccgccgccgg gtaagccgaa acgggtttcc agttcgtgat gggaaagggc
    11341 aaacagacag tccgagtcga tgtgttcggc gatttgctgc atgagatcgt caatgccggt
    11401 ggcggggtgc aggtcggtgc aatttgacgg cggcgcgctt tctgcctgct tgacgttatc
    11461 aggggcggat gcggccggtt gcaaatcgga ttgggaagaa gctgatgacg cggaggacga
    11521 agcagcagat gcaccgactt ctttggtttt atcgtttttg ttcggagaac acgcggtcag
    11581 catgattgcg gtaagccata agagaagtga tgaggttttg tttttcattc tattgtttcc
    11641 agtattaaag aggccgtctg aaaacctacc gtttcatttt tcagacggcc tgttgttaat
    11701 agaaccgaag aacctgttat tgccgacaag gttctcaacc tgtcttaccc gacgcggtaa
    11761 aacgccaggc tgcccaaaag gttggggaaa tgtttgacct gtctgttgct cgtcatcacg
    11821 gcgcgttcga ggacgcggat gttgtttttg gcgcacaaca aatcaaaatc tttgagcgtg
    11881 caccaatgga tattgggcgt gtcgtaccaa tggtagggca tacgttcgga aaccggcata
    11941 tgtccgccga gtgcgatttg gacgcggttg cgccagtagc cgaaattcgg gaagctgaca
    12001 atcgcctgtt tggcaacgcg catcaggcag cgcaggattt tttcggtatt ctgcatcgct
    12061 tggatggttt ggctcaacac aatcacatca aaactttgat cgttgaatgc ggttaaacct
    12121 tcttccaaat cggcttggat aacatttacg ccgcgcgaca tcgcggcgat gacgctgtcg
    12181 gtgtcgattt cgatgccgta gccgctgcat tttttgtgtt cgaccaatgc ggcaagcagt
    12241 tcgccgtcgc cgcagcccaa gtccaagacg cggctgcctt cgggtatccg gtcgtaaatc
    12301 agttgcaaat catcgcgcag gttcattgct gacattcctt ataaacgttg ttcatatagg
    12361 cggcgaccgc acgcatatag gcttcgtctt ccattaaaaa ggcatcgtgc ccgtgtgcgg
    12421 atttgacttc gatatactgc acggattttt gggcggcaat cagggccttg accagttcgt
    12481 gcgaacgttc gggcgcgaaa cgccaatcgg tgctgaagct ggcgacaaag aattttgcct
    12541 gaacatcctg cacggcgcgg gtcaggctgt tgccgaaatc cgccgccgga tcgaaatagt
    12601 ccaaagcctt ggtcatcagc aaataggtgt tggcatcaaa ccgcccgacg aatttgtcgc
    12661 cttgatagcg cagataggat tctacttcaa attcaacgcc atagccgtat tgatagccgt
    12721 tggaacgcaa atcgcgtccg aattttttgc ccaaaccgtc ttcggcaaga taggtgatgt
    12781 gccccatcat gcgggcaatc cgcaagcccc gagcgggaac ggtgttgcgg ctgcggtaat
    12841 gtccttcgtt gaaatcggga tcggtcaaaa tcgcctgacg cgccacatcg ttgaacgcga
    12901 tattttgcgt ggacagtttc ggcgcggacg caatcaccaa ggcgtggcgc acgcgttcgg
    12961 gataggaaat cgcccactgc aaagcctgca tgccgcccaa gctgccgccg acaaccgccg
    13021 cccattgccc gatgccgaga taatcggcaa gcgcggcttg ggattttacc cagtccttca
    13081 ccgtaaccag cggaaaatcc gcgccgtatt ccctgcccgt ttcaggatta atcgacaaag
    13141 gcccgctgct gccgtcgcag ccgcccagat tattcaaacc gaccacgaaa aaacgttccg
    13201 tatcaatcgg tttgccaggt ccgaccatat tgtcccacca gcccgtatat ttatcttccg
    13261 ccgaatgcct gcccgcaaca tgatggttgc ccgacagcgc gtggcagatt aaaaccgcat
    13321 tgtttttttc agcattcagc tcgccgtagg tttcaatcat cagatcgaaa cgcggcaaag
    13381 ttttaccgtt ttccaaaacc agcggcatct caaacggaat tttttggggc attacaatgc
    13441 ccaccgaggc attttgactc atatcctgtt ccaacaaatg cggcgaaaag cgttattata
    13501 tcgcaaacgg catgactttt tgacacggtc ggacaagcag ccggacgcgt ttgaccctca
    13561 tccgccgcac acgaatcata ctttttcaga cgacctccac cgcttcccga catgataggc
    13621 agacttttcc gtattttttt ctttttcgca cttgccgcgt tgattatcaa ccgccttttc
    13681 agccgcaggc aaaaacgcgc cctgcgcgaa gtcgccgaaa tcagcgcatg ggtactgctc
    13741 ggtgcagccg ccgcgatgct gttttggtat ctgtttatgc tgtatttcaa acacattccg
    13801 gattcgtatt gacggaaaaa atgccgtctg aaacgcattt ttctgtttca gacggcatat
    13861 ttgatgaaaa gggcttgcgg taggaggtgc tttatagtgg attaaattta aaccagtacg
    13921 gcgttgcctc gccttgccgt actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat
    13981 ttttgttaat ccactataca accgaagcag gaagggcagg gagtcagcgt tggcgcgctt
    14041 taaaacgcgg attgcttttg cagatgacgt aaactttgcc cctgcgtctg acgatttggc
    14101 agtcgcggtg gcgttgtttg gcggttttga gtgaagacag aacctgcatt atttgtcctt
    14161 tctaaacgat gacatgacgg attggaaacg ttggttgaac ttgctggcgc gtccttcggt
    14221 gttgacgtta cgctgcttgc cggtatagac gggatgggat gcggaagaag tatccagcga
    14281 aaacagcgga tattctttgc cgtctgtcca aaccatcgtt tttccgtgtg tttcggcaca
    14341 ggagcggatt aaccagcctt cattggcgct gctgtcgaaa aaaaggacgg ttcgataatt
    14401 gtcaggatga atatttggtt tcatatattg ccttgctttc agtgttataa cataacaaac
    14461 tctagcatag tttagaaggg ctgtacaagg aaatttaact atttttgtaa tatattagaa
    14521 attttcatga taaatctgaa aattttgaaa ttgactcatg tttggcgcaa ctttattatg
    14581 ttgcctgaaa catcatataa aagataataa aaggtacgca gccatgaatt acgcaaaaga
    14641 aatcaatgcg ttaaataaca gtctttctga tttgaaaggc gacattaacg tttcgtttga
    14701 atttttcccg ccgaaaaacg aacaaatgga aacgatgctg tgggactcca tccaccgtct
    14761 gcaaaccctg catcccaagt tcgtatccgt aacttacggc gcaaattccg gcgaacgcga
    14821 ccgcacgcac ggcatcgtca aacgcatcaa acaggaaacc ggcttggaag ccgcgcctca
    14881 cctgaccggt atcgacgctt ctcccgacga attgcgccaa attgccaaag attattggga
    14941 cagcggcatc cgccgcattg tcgccctgcg cggagacgag ccggccggtt atgagaaaaa
    15001 accgttttac gccgaagact tggttaagct attacgctcc gtcgccgact tcgacatctc
    15061 tgtagcagca tatcccgaag tgcatcccga agcgaaatcc gcacaagccg acctgattaa
    15121 tttgaaacgc aaaatcgatg cgggcgcgaa ccacgtcatc acccaattct tcttcgatgt
    15181 ggaacgctac ctgcgcttcc gcgaccgctg cgtgatgttg ggtatcgatg tggaaatcgt
    15241 ccccggtatt ttgcctgtta ccaacttcaa gcagctcggt aaaatggctc aagtaaccaa
    15301 cgtcaaaatc ccaagctggc tgtcgcaaat gtatgaaggt ttggacgacg accaaggtac
    15361 gcgcaatctg gtggcggcaa gtatcgccat cgatatggtc aaagtcctgt cccgcgaagg
    15421 cgtgaaagat ttccacttct atacgcttaa ccgcagcgag ctgacttacg ccatttgcca
    15481 tattttaggc gtgcgccctt aaagccgtat caaacagttt cagacggcat ctaaggtgtc
    15541 taaaaagcaa aacaccgccc catccgagcc attctgattt acaataccgg ccgattcgga
    15601 ttgaaccggt ccttacaaaa tccaactgga gagttcaaca tgacaacatt acatttctca
    15661 ggcttcccgc gtgtcggcgc cttccgcgaa ttgaaattcg cacaagaaaa atactggcgc
    15721 aaagaaatca gcgagcaaga attgctggct gttgctaaag acttgcgcga gaaaaactgg
    15781 aaacaccagg tcgctgccaa cgccgatttc gttgccgtag gcgatttcac tttctacgac
    15841 cacatcctcg acctgcaagt cgccaccggc gcgattcccg cccgcttcgg cttcgacagc
    15901 caaaacctgt ctttggaaca attcttccaa ctggcgcgcg gtaacaaaga ccaattcgct
    15961 atcgaaatga ccaaatggtt cgacaccaac taccactact tggtgcctga attccacgcc
    16021 gataccggat tcaaagccaa tgccaaacac tatgttcaac aactgcaaga agcccaagcc
    16081 ctcggtctga aagccaaacc gaccgttgta ggtccgttga ctttcctgtg ggtgggtaaa
    16141 gaaaaaggcg ccgtcgaatt cgaccgtctg agcctgttgc ctaaactgtt gcctgtttac
    16201 gttgaaatcc tgactgcttt ggttgaagcc ggtgccgagt ggattcaaat cgacgagcct
    16261 gctttggctg tcgatttgcc taaagaatgg gtggaagcct acaaagacgt ttacgctact
    16321 ttgagcaaag tcaacgccaa aatcctgttg agcacttact tcggttctgt tgccgaacac
    16381 gccgcattgt tgaaagccct gcctgttgac ggtctgcaca tcgacttggt acgcgccccc
    16441 gagcaactgg acgcgttcgc cgactacgac aaagtcctgt ctgccggcgt gattgacggc
    16501 cgcaacattt ggcgcgccaa cctgaacaaa gttttggaaa ctgtcgagcc tctgcaagcc
    16561 aaactgggtg accgtttgtg gatttccagc tcttgctcgc tgctgcacac tccatttgac
    16621 ttgtcagttg aagaaaaact gaaagccaac aaacccgacc tgtactcttg gttggcattc
    16681 accctgcaaa aaaaccaaga attgcgcgtt ctgaaagctg cattgaacga aggccgtgat
    16741 tctgttgccg aagaactcgc cgccagccaa gctgctgccg actcccgtgc caacagcagc
    16801 gaaatccatc gtgcagacgt tgccaaacgc ctggccgatt tgcctgccaa cgcagaccaa
    16861 cgcaaatctc catttgccga ccgtatcaaa gcgcaacaag catggttgaa cctacctctg
    16921 ctgccgacga ccaacatcgg ttctttcccg caaaccaccg aaatccgcca ggcacgctca
    16981 gccttcaaaa aaggcgaact gtctgccgcc gattacgaag ccgcgatgaa aaaagaaatc
    17041 gccttggtgg ttgaagagca agaaaaactg gacttggacg tactggtaca cggcgaagcc
    17101 gagcgtaacg acatggttga atacttcggc gaattgttga gcggttttgc attcactcaa
    17161 tacggctggg tacaaagcta cggctcacgc tgcgtgaaac caccgattat ctttggcgac
    17221 gtaagccgtc ctgaagccat gaccgtggct tggtctactt acgctcaaag cctgaccaaa
    17281 cgcccgatga aaggtatgtt gaccggccct gtaaccattc tgcaatggtc tttcgtccgc
    17341 aacgatattc cccgcgctac cgtgtgcaaa caaatcgcac tggctctgaa cgacgaagta
    17401 ttggatctgg aaaaagcagg catcaaagtc atccaaatcg acgaacctgc catccgcgaa
    17461 ggtctgcctt tgaaacgtgc cgattgggat gcctacctga actgggcggg cgaatctttc
    17521 cgcctgtcct ctgccggttg tgaagacagc actcagatcc acacccatat gtgttactcc
    17581 gagttcaacg acatcttgcc ggccatcgcc gctatggatg ctgacgtcat caccatcgaa
    17641 acttcacgtt ccgatatgga actcttgacc gcgttcggcg aattcaaata cccgaacgac
    17701 atcggcccgg gggtttacga catccacagc ccgcgcgtac cgactgaagc cgaagttgag
    17761 cacctgttgc gcaaagccat cgaggttgta ccggttgagc gtctgtgggt gaatcctgac
    17821 tgcggcctga aaacacgtgg ctggaaagaa actctggaac aactccaagt gatgatgaac
    17881 gtaacccgaa aactgcgtgc cgaattggcg aaataagccg agaccgtatg aataaatacc
    17941 gtctgaaagc ctttcagacg gtattttgtc ctgatttgcg gcgcaagggc gcagttgccg
    18001 gaaaatcttt tcattgcagc ttgttttttt ctcattcggc tttatatgtg ggaaacaggc
    18061 aaatcggagt tgtgtttgat agttttaaat aatttatatt atttgaacta taaattatac
    18121 aaatcatttt gcatggggta gaatgcccag cgattcacaa ttatttctca aaccaatcta
    18181 ttaaggagct taaaatggct ttgcaagatc gtaccggtca aaaagtacct tccgtagtat
    18241 tccgcacccg cgtcggcgac acttggaaag atgtgtctac cgatgatttg ttcaaaggca
    18301 aaaaagtagt cgtattctcc ctgcccggtg catttacccc gacttgttct tcttcacacc
    18361 tgccgcgtta caacgaattg ttcggcgcgt tcaaagaaaa cggcgttgac gcaatctact
    18421 gcgtatctgt aaacgatacg ttcgtaatga acgcttgggc tgccgaagaa gaatccgaca
    18481 acatctacat gattcctgat ggcaacggcg aatttaccga aggtatgggt atgctggtcg
    18541 gtaaagaaga cttgggcttc ggtaaacgct cttggcgtta ctccatgctg gttaacgacg
    18601 gcgtggttga aaaaatgttc atcgaacctg aagaaccggg cgatccgttc aaagtatccg
    18661 atgcagatac tatgctgcaa ttcgttgctc ccgattggaa ggctcaagag tctgtggcaa
    18721 ttttcactaa accaggttgc caattctgcg ctaaagccaa acaagctttg caagacaaag
    18781 gtttgtctta cgaagaaatc gtattgggca aagatgcaac cgttacttcc gttcgcgcca
    18841 ttaccggcaa gatgactgcc cctcaagtct tcatcggcgg caaatacatc ggcggcagcg
    18901 aagatttgga agcttacttg gctaaaaact gatagctgtt tgcttaaggc ggtttgatta
    18961 aactgtctga tataccggat agagttattc gggcggttct gcactgctgc tccgaataac
    19021 tctatattta taagagaatt tggatattgt tgcactcaat cgaaattttg tttttattta
    19081 tctgaatgat gtttttgatt gggaaaatat ttaaatgccg tctgaaaccg atatgttctg
    19141 tgtcggcaat gtttcagacg aaaacggaag gacaaagatt atgaaaaaaa ttcaagcgga
    19201 tgtcgtcgta ctcggcggcg gtactgccgg tatgggtgcg tttcgcaatg cccgtttaca
    19261 ttcggataat gtttacctga ttgaaaacaa tgtgttcggc acaacctgcg cgcgcgtggg
    19321 ttgtatgcct tccaaactct tgattgccgc cgcagaagcg cgccaccacg cattgcatac
    19381 cgactcgttc ggcgtgcatt tggacaaaga cagcatcgtc gtcaacggtg aagaggtcat
    19441 gcagcgcgtt aaatccgagc gtgaccgttt tgtcggcttt gtcgttgccg atgtggaaga
    19501 gtggcctgcc gacaagcgca tcatgggttc ggctaaattt atcgacgagc ataccgtcca
    19561 aatcgacgag catactcaaa ttacggcaaa aagtttcgtg attgctaccg gttcgcgtcc
    19621 cgtcatcctg ccgcaatggc agtctttggg caatcgtttg attatcaacg atgacgtttt
    19681 ctcatgggat acgctgccta agcgcgttgc cgtgttcggg ccgggtgtta tcggtttgga
    19741 actgggtcag gcattgcacc gtttgggcgt gaaagttgaa attttcggtt tgggcggaat
    19801 catcggcggc atttccgacc ccgtcgtttc agacgaggcg aaagccgtgt tcggcgaaga
    19861 attgaaactg catttggatg ctaaaaccga ggtcaagctc gatgcagacg gcaatgtaga
    19921 agtccattgg gagcaggatg gcgaaaaagg cgtatttgtt gccgaatata tgctggcagc
    19981 cgtgggccgc cgtccgaacg ttgacaatat cggtttggaa aatatcaata tcgaaaaaga
    20041 tgcgcgcggc gtacctgttg ctgatccgct gaccatgcag accagtattc cgcatatctt
    20101 catcgcaggc gatgcgtcca accaactgcc tctgctgcat gaagctgccg accaaggcaa
    20161 gattgccggc gataacgcga gccgctaccc gaatatcggc ggcggtttgc gccgcagcac
    20221 catcggcgtg gtgtttacca gtccgcaaat cggctttgtc ggtctgaaat acgcgcaggt
    20281 tgccgcgcaa taccaagccg acgaatttgt catcggcgaa gtatcgttca aaaaccaagg
    20341 ccgcagccgc gtgatgctgg taaacaaagg ccatatgcgc ctgtatgccg aaaaagccac
    20401 cggccgcttt atcggcgcgg aaatcgtagg ccctgccgcc gaacatttgg cgcacttgtt
    20461 ggcatgggcg catcaaatga agatgaccgt tccgcaaatg ctggatatgc cgttctacca
    20521 tcccgttatc gaggaaggtc tgcgtaccgc gttgcgcgat gccgatgcga aattgaaagc
    20581 ctgaccgata tggcaaaaca atgccgtctg aaattttttc agacggcatt ttgtttttgg
    20641 ggatggggtc ggatgctgat accgtgtcgg gaagggggcg gcaaaactaa aaatctttct
    20701 tttaatctgc tgtttccacg cgtgtttgtc aaaatctatc agtttgtttt taaaatacac
    20761 tgttcaaaat gggataaaac aggtaaatta acgtttatgt aacccagtgt agcaatgggt
    20821 ttacggtttt tgagtcgata tataactaca gaggaattga ctatgtctgc caaaccgcgt
    20881 cctgtttatc tggatttgcc gaacatccgt ctgccgatac ccgggatagt ttccatcctt
    20941 caccgcatca gtggggtcgg gctgtttatt atgctgcctt tcctgctgta tttcctgtcc
    21001 ggtaccctga gtcaagagtc tgcatttgaa acttaccgtg ccattgtttc ccatcctttg
    21061 gtcaagctgg ttttaatcgg tgtattgtgg gcttatctgc accattctct cgccggtatc
    21121 cgctttttat ttttggatgc gcacaaaggc cttgagctga atactgcgcg caataccgct
    21181 aaagccgtat ttgcttctgc attggttttg actgtcgttt tgggagcgtt gttatggtag
    21241 aacgtaaatt gaccggtgcc cattacggtt tgcgcgattg ggcgatgcaa cgtgcgactg
    21301 cggttattat gttgatttat accgttgcac ttttagtggt tctattttcc ctgcctaaag
    21361 aatattcggc atggcaggca ttttttagtc aaacttgggt aaaagtattt acccaagtga
    21421 gcttcatcgc cgtattcttg cacgcttggg tgggtatccg cgatttgtgg atggactata
    21481 tcaaaccctt cggcgtgcgt ttgtttttgc aggttgccac catcgtctgg ctggtcggct
    21541 gcttggtgta ttcaattaaa gtaatttggg ggtaagtatg ggttttcctg ttcgcaagtt
    21601 tgatgccgtg attgtcggcg gtggtggtgc aggtttacgc gcagccctcc aattatccaa
    21661 atccggtctg aattgtgccg ttttgtctaa agtgttcccg acccgttcgc ataccgtagc
    21721 ggcgcagggc ggtatttccg cctctttggg taatgtgcag gaggaccgtt gggactggca
    21781 catgtacgat accgtgaaag gttccgactg gctgggcgac caagatgcga ttgagtttat
    21841 gtgccgcgct gcgcctgaag cggtgattga gttggaacac atgggtatgc cttttgaccg
    21901 tgtggaaagc ggtaaaattt atcagcgtcc tttcggcggc catactgccg aacacggtaa
    21961 acgcgcggta gaacgcgcct gtgcggttgc cgaccgtaca ggtcatgcga tgctgcatac
    22021 tttgtaccaa caaaacgtcc gtgccaatac gcaattcttt gtggaatgga cggcacaaga
    22081 tttgattcgt gatgaaaacg gcgatgtcgt cggcgtaacc gccatggaaa tggaaaccgg
    22141 cgaagtttat attttccacg ctaaagctgt gatgtttgct accggcggcg gcggccgtat
    22201 ttatgcctct tctaccaatg cctatatgaa taccggcgat ggtttgggta tttgcgcgcg
    22261 tgcaggtatc ccgttggaag acatggaatt ctggcaattc cacccgaccg gcgtggcagg
    22321 tgcgggcgtg ttgattaccg aaggcgtacg cggcgagggc ggtattctgt tgaatgccga
    22381 cggcgaacgc tttatggaac gctatgcgcc gaccgtaaaa gacttggctt ctcgcgacgt
    22441 tgtttcccgc gcgatggcga tggaaatcta cgaaggtcgc ggctgcggta aaaacaaaga
    22501 ccatgtctta ctgaaaatcg accatatcgg cgcagaaaaa attatggaaa aactgccggg
    22561 catccgcgag atttccattc agttcgccgg tatcgatccg attaaagacc cgattcccgt
    22621 tgtgccgact acccactata tgatgggcgg tattccgacc aactaccatg gcgaagttgt
    22681 cgttcctcaa ggcgacgaat acgaagtgcc tgtaaaaggt ctgtatgcgg caggtgagtg
    22741 cgcttgtgct tccgtacacg gtgcgaaccg cttgggtacc aactccctgt tggacttggt
    22801 ggtattcggt aaagctgccg gcgacagcat gattaaattc atcaaagagc aaagcgactg
    22861 gaaacctttg cctgcggatg cgggcgagct gacccgccaa cgtatcgagc gtttggacaa
    22921 tcaaactgat ggcgaaaacg ttgatgcatt gcgtcgcgaa ttgcaacgct ccgtacaact
    22981 gcacgccggc gtgttccgta ctgatgagat tctgagcaaa ggcgttcgag aagtcatggc
    23041 gattgccgag cgtgtgaaac gtaccgaaat caaagacaag agcaaagtgt ggaataccgc
    23101 gcgtatcgag gctttggaat tggataacct aattgaagtg gcgaaagcga ctttggtgtc
    23161 tgccgaagca cgtaaagaat cacgcggtgc gcacgcttca gacgaccatc ctgagcgcga
    23221 tgatgaaaac tggatgaaac atacgctgta ccattcagat accaatactt tgtcttacaa
    23281 accggtacat accaagcctt tgagcgtgga atacatcaaa ccggccaagc gcgtttattg
    23341 atgcgttttc agacggtttt cgcctcataa gctcgtctga aatctaacca tacccacatt
    23401 gaactgcttg aatttataat acaaaatcat tgggcagttg atgagaaaag gaacacttct
    23461 catggaaaaa atgagttttg aaatttaccg ttacaacccg gatgttgatg ccaagcctta
    23521 tatgcagcgt tacgagttgg aattggaacc gaccgacgtg aaacttttgg atgctttggt
    23581 acgcctgaaa gcacaagacg ataccttgtc tttccgccgc tcctgccgcg aaggcatttg
    23641 cggttctgac ggtatgaaca tcaacggcaa aaacggcttg gcgtgtttga ccgatctgcg
    23701 tggcttgaaa cagccggtta aaattcgtcc tctgccaggt ctgcctgtta tccgtgacct
    23761 gattgtggat atgacccagt tcttcaaaca ataccattcc gtcaaacctt atgttgtcaa
    23821 cgataatccg attgatgcgg acaaagagcg tctgcaaact caggaagagc gtaaagagtt
    23881 ggacggtttg tacgagtgta ttttgtgcgc ctgctgttcg actgcctgcc cgtcattttg
    23941 gtggaaccct gataaattcg ttggtccgtc cggtttgctg aatgcttacc gcttcattgc
    24001 ggacagccga gataccatca ctagtgagcg tttggataat ctgaacgacc cataccgttt
    24061 gttccgttgc cacaccatta tgaactgcgt agacgtatgt cccaaacact tgaatccgac
    24121 ccgagccatc ggtaagatta aagagattat gttgaaacgg gccgtttaag aaatgatggt
    24181 ttttgacgat attgccaaac ggaaaatccg ttttcaaacc cgccggggat tgttggagtt
    24241 agatttaatc ttcggcaggt ttatggaaaa agaattcgag catttgagcg ataaagagct
    24301 gtccgagttt tccgaaatcc ttgaatttca agatcaagaa ttgcttgcct tgattaacgg
    24361 gcattcggaa acggacaaag ggcaccttat cccgatgctt gaaaaaatca gacgggcatg
    24421 aggcatctga aatctgcctg caggcagatt tcaaaatgca aaagccgtct gaaggcaaag
    24481 aacgtgctgc ggatgcagta acgtgggtta taacttgcaa aggagcaata atatgtccaa
    24541 atcaatcaaa ctcaacgtac cgggtcaggc aggtttggag ctgccggtat tggaagccag
    24601 catcgggcac gatgtggttg acattcgggg gctgacaaaa aatacaggtt tgttttcctt
    24661 cgaccccgga tttgtttcaa ccgcaagctg tgagtctaaa attacttaca tcgacggcga
    24721 tcaaggcttg ctttattatc gcggataccc catcgagcag ctggccgaaa agtccgatta
    24781 tttggaagtc tgctacctgt tgatttacgg cgaactgccg actcccgagc aaaaggcaga
    24841 atttgacaat accgtccgcc gccacacgat ggtgcatgaa cagctgactt ggttcttccg
    24901 gggcttccgc cgcgacgcgc atccgatggc gatgatggtc ggcgtggtcg gcgcactgtc
    24961 tgcgttctac caagacagct tggacattag caatcccgaa caccgcaaaa tcgcgattta
    25021 ccgcctgatt tctaaaatcc cgaccattgc ggcaatgtgc taccgctatt caaacggtct
    25081 gccgttcaat tatccgaaga ataatctttc ttattccgaa aacttccttc atatgatgtt
    25141 cgccacgccg tgtgaagact acaaacccaa tcccgttttg gcacgcgcgc tcgaccgcat
    25201 ctttattttg catgccgacc acgagcaaaa cgcctcaact tcaaccgtcc gtctggcagg
    25261 ctcttcgggt gcgaatccgt ttgcctgtat tgctgccggt atcgcctgcc tgtggggtgc
    25321 ttcgcacggc ggtgcgaacg aagccgtgtt gaaaatgttg gacgaaatcg gcgatgtgtc
    25381 taatgttgcc gcatacatgg aaggtgtgaa acaacgcaaa taccgtctga tgggcttcgg
    25441 tcaccgcgtg taccgcaata tggatccgcg tgccagcatt atgcgcgaaa cctgctatga
    25501 agttttgaag gaattgggct tggaagacag tccgaaattc aaactggcga tggaattgga
    25561 acagattgcg ctgaaagacc cgttctttat cgaacgcaaa ctgtatccaa acgtcgattt
    25621 ctattccggc atcgtcctgt ccgcgctggg catcccgacc gaaatgttta ccgtcatctt
    25681 cgccctgtcg cgcagcgtgg gctggatttc gcactggcac gagatgatta gcgatccttc
    25741 gctgaaaatc ggccgcccgc gccagcttta taccggttcg gaacgccgcg attatgtgcc
    25801 gccaggcgag aggtaacata cattaatata ttgtcaaaca ggcaatatca gagaaccgga
    25861 ttgtttcccg aatccgtctg attgtagtcg gatgaaatca agacaagcaa tccggtttaa
    25921 aatagggtag aataaaatgt cttttcagac ggcatcagtt tagccgtcag gacgcggact
    25981 tctacccttt gtttatattt taaagaaaag agcgcacgcc atgatggacg aaaaactcaa
    26041 tttctcttac ctgttcggtt cgaacgcacc ctacattgag gaattgtacg aggctttttt
    26101 ggaaaacccc gatacggttg atgaaaaatg gaagcagtat ttcaccgatt tgagcaaaca
    26161 gccggggacg gttgctgtcg atgtcgcaca cacaccgatt cgcgaatcat ttgttacttt
    26221 ggcgaaaaag aaaattgcat ctgccgttgc gggcggtgcg gatgaggcaa tgctgaaaaa
    26281 gcaagtcagc gttttacggc tgatttctgc ctatcgtatc caaggcgtgg gtgcagccca
    26341 acttgatccg ctcaaacgta tccccccgcg cgatattgaa gccctcgatc cgaaattcca
    26401 cggtctgtct gatgccgata tggcgcttca attcaatatg ggcgagggcg attttgccaa
    26461 tcgcggcaaa ctgcctttgt cccaaatcat cagcaacctc aaacaaacct actgcggcca
    26521 catcgcattg gaatatatct atattcccaa taccgaagag cgccgctggg tacgcaatta
    26581 ttttgaaagc gtattgtcca caccgcatta caatgccgat caaaaacgcc gtatcttgaa
    26641 agagatgact gctgccgaga ctttggaacg ttatctgcat accaaatatg tcggtcagaa
    26701 acgtttcggt gtcgaaggcg gcgaaagcgc gattgccggt ttgaactacc tgattcaaaa
    26761 cgccggtaaa gacggcgtgg aagaagtcat catcggtatg gcgcaccgtg gccgtctgaa
    26821 tgttttggtg aacattttgg gcaaaaaacc cggcgatttg tttgccgaat ttgaaggtcg
    26881 tgccgaaatc aaactgccca gcggcgacgt gaaataccat atgggcttca gctccgatat
    26941 tgctaccccg cacggcccga tgcatgtttc tttggcgttc aacccgtccc acttggaaat
    27001 cgtcaatccg gtagtggaag gttctgcacg cgccaagcaa aaacgtttgg gcgaaaacgg
    27061 ccgcgataaa gtcttgcccg tattgattca cggcgactcc gcatttatcg gtttgggtgt
    27121 caaccaagcg acattcaacc tgtctaaaac gcgcggttat accaccggcg gtacggttca
    27181 tatcgtcatc aacaatcaaa tcggctttac cacttccgat atccgcgata cccgttcaac
    27241 cgtacactgt accgatatcg caaaaatggt ttccgctccg gttatccatg tgaacggcga
    27301 tgatcctgag cgtgtttgct ttgccatcca agccgctttg gattaccgca aaaaattcca
    27361 taaagacatc gtgattgacg ttgtctgcta ccgtaaatgg ggtcacaacg agggcgatga
    27421 tccgaccttg acccaaccga tgatgtacaa aaaagtatcg caacaccccg gtgcgcgtgc
    27481 tttgtacacc gagcaactga ttgccgaagg cgtggtaacc caagccgagg cagacggtta
    27541 catccaagcc taccgtgatg ctttggacaa aggcgaacac gtcgagcaaa caacgttgag
    27601 caactttcaa cgcacgcaaa tcgactggag caaataccaa ggcaaagatt ggcgcgaaca
    27661 catcgaaacc ggtttgcctg ccgcagatat tgagcgtctc actgagaagt ttaccgccgt
    27721 accggaaggc tttgccctgc atccgactgc aaaacgtgtg attgaagcgc gtaaagccat
    27781 ggcatccggc aaacaggcca tagattgggg tatggccgaa accttggcat acgccagcct
    27841 cgtaaccaaa ggtcatggcg tgcgtatctc cggtgaggac tccggccgcg gtacgttctc
    27901 gcaccgccac gccgtattgc acgatcaaaa acgcgaaaaa tgggacgacg gtacttatgt
    27961 tcccctgcgc catatgggcg aaggaatggg cgagttcctg gttatcgact ccatcttgaa
    28021 cgaagaggcc gtgatggcgt tcgagtacgg ctttgcctgc tccgctcctg acaagctcac
    28081 catttgggaa gctcaattcg gtgacttcgc caacggcgcg caagtgacta ttgaccaatt
    28141 cctgtcttca ggcgaaacca aatggggtcg cttgtgcggt ctgaccacca tcctgccgca
    28201 cggttacgac ggtcaaggcc ctgagcactc ttctgcacgc gtagaacgct ggttgcaact
    28261 gtgttctgag aacaatatgc aagtcatcat gccatctgaa gcgtcgcaaa tgttccacct
    28321 cttgcaacgt caagtcttag gttcataccg caaaccgctg gtaattttca tgtccaaacg
    28381 cctgttgcga ttcaaagggg caatgagccc gctggaaaac ttcaccgaag gttcgacttt
    28441 ccgtccggtt gtcggcgata ccgccgaacg cgcaagcaac gacagcgtga aacgcgtggt
    28501 attgtgtgcc ggtcaggttt actatgactt ggaagccggt cgagccgaac gtaaactgga
    28561 agatgatgtt gcgattgtcc gcgttgagca gctgtatccg ttcccatacg atgaggttaa
    28621 agccgaactg gcgaaatatc cgaacgcaaa atctgtggtt tgggcgcaag aagagccgaa
    28681 aaaccaaggc gcgttctacc aaatccgcca ccgcatcgaa gacgttatca gcgaagagca
    28741 aaaactgtct tatgccggtc gtccaagcag cgcatcgcct gcagtgggct actcaagcaa
    28801 acacattgct caattgaaac aattggttga agacgctttg gcgttgtaaa ccaagcagca
    28861 ttccgtctga ggctgctcag gcggaatgcc catatgcaga atgaaaaaca cacaacaggc
    28921 cgtctgaaag ggccattgga gacacaaaat gattattgat gtaaaagtac ctatgctgtc
    28981 tgaaagcgta tctgaaggca cgctcttgga atggaagaaa aaagttggcg aagcagttgc
    29041 ccgtgacgaa atcctgatcg atatcgaaac ggacaaagtg gttttggaag taccttctcc
    29101 acaagccggc gtattggttg aaatcgtagc gcaagacggt gaaaccgttg ttgccgacca
    29161 agttttggca cgtatcgata ccgctgctac tgccgctgct gaagcacctg ccgccgctcc
    29221 tgccgaagct gccccggccg ccgctcctgc tgctgcacaa aacaacgccg ctatgcctgc
    29281 cgccgccaaa ctggctgcag agagcggtgt tgacgtgaac gcattgcaag gttccggccg
    29341 tgacggtcgc gtattgaaag aagacgtaca aaatgccgca gccaaacctg ccgcagccgc
    29401 tgctcctgcc gttgcacttc ctgccggcgc acgtcctgaa gaacgcgtac cgatgagccg
    29461 cctgcgtgcc cgtgttgcag aacgcctctt ggcttctcaa caagaaaacg ccattctgac
    29521 tacattcaac gaagtcaaca tgaaaccaat catggacttg cgtgcgaagt acaaagaaaa
    29581 attcgagaaa gaacacggcg tgaaactggg ctttatgtcc ttcttcgtta aagccgctgt
    29641 tgcagccctg aaaaaatacc cggttgtgaa tgcttctgtt gacggcaaag acattgtgta
    29701 ccacggctac ttcgacatcg gtatcgcgat tggcagccca cgcggtttgg ttgtgccaat
    29761 cctgcgcgat gccgaccaaa tgagcattgc cgacatcgaa caagcaattg ttgattacgc
    29821 gaaaaaagcc aaagacggca aaatcgctat cgaagatctg accggcggta cattcagtat
    29881 taccaacggc ggtactttcg gttctatgat gtccaccccg atcatcaatc cgcctcaatc
    29941 tgcgattttg ggtatgcacg ccactaaaga gcgcgctgtg gttgaaaacg gccaagttgt
    30001 tgtccgtcca atgatgtatc tggctctgtc ttacgaccac cgtatcattg acggccgcga
    30061 agctgtattg accttggtag ccattaaaga cgcgttggaa gacccagccc gcctgttgtt
    30121 ggatctgtaa tcgtttcaga cggcctttta tttgttaatg aaaaggccgt ctgaattttt
    30181 atagtggatt aaatttaaac cagtacggcg ttgcctcgcc ttgccgtact atttgtactg
    30241 tctgcggctt cgtcgccttg tcctgattta aatttaatcc actatattta gatgtagcgt
    30301 aatgtagtat cgtgctacaa taggctcaac aaacgattga gaccgtctga aacatttgat
    30361 tcgaatgaat cggcagatat ggactttcag acggcttttt cttaaaacca tcaaaacgca
    30421 gtcattcaaa ataaaaaaga aacgaaaagt atcgttttta ttttgagata ctgctaaaag
    30481 caaaggatga cacgatgtct caatatgatg tagtagtgat tggtgcaggc ccgggcggat
    30541 acgttgccgc catccgtgcc gcacaactgg gtttcaaaac tgcctgtgtc gatgcaggcg
    30601 ttaacaaagc aggcaatgcc cctgcattgg gcggtacttg cttgaacgta ggttgtatcc
    30661 cttctaaagc cctgttgcaa tccagcgaac atttccacgc agcgcaacac gagtttgccg
    30721 aacacggtat cactgtcggc gacgtaaaat tcgacgtggc caaaatgatt gagcgcaaag
    30781 atgccatcgt aaccaaactg accggcggcg tgaaattcct gttccagaaa aacaaagtaa
    30841 ccagcctgtt cggtacggct tcctttgccg gcaaaaatgg cgatgcttac caaatcgaag
    30901 tcgataacaa aggtgagaaa accgttatcg aagccaaaca cgtcatcgta gcgaccggtt
    30961 ccgtaccgcg tccgctgcca caagtcgcta tcgacaatgt gaacgtattg gacaacgaag
    31021 gcgcattgaa cctgaccgaa gtacctgcca aactcggcgt gatcggttcc ggtgtgattg
    31081 gtttggaaat gggttccgta tggaaccgcg tgggtgcgga agttaccatt cttgaagccg
    31141 cgccgacctt cctggctgcc gccgaccaac aaatcgccaa agaagccttc aaatacttca
    31201 ccaaagagca aggtctgagc atcgaattgg gcgtgaaaat cggcgacatc aagtctgaag
    31261 gcaaaggtgt ttccgttgct tacgaaactg ctgccggcga agccaaaacc gaagtattcg
    31321 acaaactgat cgttgccatc ggccgtattc caaacaccaa aggcctgaac gccgaagccg
    31381 taggcttgga aaaagacgag cgcggcttta tcaaagtaga tggcgaatgc cgtaccaacc
    31441 tgcctaacgt atgggcaatc ggcgacgtgg ttcgcggccc gatgttggca cacaaagcca
    31501 gcgacgaagg cgttgccgtt gccgaacgca ttgccggtca aaaaccgcat atcgacttca
    31561 acaacgtacc gttcgtgatt tacaccgatc ctgaaatcgc ttgggtgggt aaaaccgaag
    31621 agcagctcaa agccgaaggc gtggagtaca aaaaaggtac ttcaggtttt ggtgcgaatg
    31681 gtcgcgcatt ggcaatgggc aaagccaaag gtacggttaa agtgttggca gacgccaaaa
    31741 ccgaccgcat cttgggcgta cacatgattg gtccggttgt cagcgaattg cttaccgaag
    31801 gcgtgactgc gctcgaattc ttcgccagca gcgaagacat cgcccgcatt atccatgccc
    31861 acccaacctt gtccgaagtg gttcacgaag ctgcattggc ggccgacaaa cgcgctttgc
    31921 acggttgata gacattaagg cctccgacaa attgaatgtt ccgagagctt cgttttctga
    31981 tttataattc cgtcagacaa acaaacagca tttacattcg ttatgaacaa agaaatagtc
    32041 ggtattttct ttataccgat gggcatcatc agcatgtgta tggccgcatt gtggcagatg
    32101 tatgtgatga tgaccgaaac ttatacgctc aaccgtttca aagataaaga attggtttgg
    32161 cgcgtggcat tgttgtttat cagtttcagc cttgccgttt atctgctctg tccgaattcg
    32221 cgtaaaaaag gcattgtctt ttttattctc gggggaggcg gtgcagccat gtatctgctg
    32281 gcgcggatgt ggttgccttt cagcaagtga aacgacgatt ttccgaccgc cgaaaggtag
    32341 tctgaaacgc acgggcttgc catttggagg caaactcggg gcattacact aatctaaagg
    32401 agaaatccat gaatttacac gagtatcagg ctaaagaact gctggctggc tacggtttgc
    32461 ccgtacaagg cggtattttg gcacacaacg gcgaagaagc cgctgcagct tacgacaaat
    32521 tgggcggcaa attcgctgtt gtcaaagcac aagtacacgc cggcggccgc ggtaaagcgg
    32581 gcggcgtaaa agtcgttaaa agccgcgaag aagctaaaga agtggctgaa agcctgattg
    32641 gcaccaactt ggtaacttac caaaccgatg ccaacggtca acctgtcaac agcgttttgg
    32701 tttgcgaaga tatgtatccg gttcaaaccg agctgtactt gggcgcagtg gttgaccgtt
    32761 ctacccgccg cgttacattc atggcttcta ccgaaggcgg tgtggaaatc gaaaaagttg
    32821 ctgccgaaac tccagaaaaa atcttcaaag taaccgttga tccgctggtc ggcctgcaac
    32881 cttgccaagc tcgcgaagtt gccttccaac tgggcttgaa agacaaacaa atcaacgagt
    32941 tcgtcaaact gatgaccggc gcgtacaaag cgtttgtcga aaacgacttc gccctgtttg
    33001 aagtcaaccc gctggcagtt cgcgaaaacg gcgcactggc ttgcgtggac ggcaaaatcg
    33061 gcatcgacag caacgcgctc taccgcctgc cgaaaatcgc cgaattgcgc gacaaatctc
    33121 aagaaaacga acgcgagctg aaagcttccg aattcgacct gaactatgtt gccctggaag
    33181 gtaatatcgg ctgtatggtt aacggtgccg gtttggcgat ggccaccatg gacatcatca
    33241 aactgaaagg cggccaacct gccaacttct tggacgttgg cggcggcgca accaaagacc
    33301 gcgtggttga agcgttcaaa ctgattctgg aagacaaatc cgttcaaggc gtattgatca
    33361 acatcttcgg cggtatcgta cgttgcgaca tgattgcgga agctatcgtg gcagccgtta
    33421 aagaaatcaa cgtcgacgtt cctgtcgttg ttcgtttgga aggcaacaac gccgaactcg
    33481 gcgcgaaaat cctgaacgaa tcaggcctga aactgacttc tgcagacggc ctgaatgacg
    33541 cagccgaaaa aattgttgca gccgtaaacg cctaaggaga aaagaatgag cgtattgatt
    33601 aataaagaca ccaaagtatt ggttcaaggt ttcaccggta aaaacggtac tttccactcc
    33661 gaacaagctc tggcttacgg cactaaagtt gtcggcggcg ttaccccggg caaaggcggt
    33721 caaacccacc tgaacctgcc tgtattcaac accatgaaag aagctgttaa agaaaccggc
    33781 gcggatgcat ccgtaattta cgttcccgct ccgtttgtgt tggattctat cgttgaagcc
    33841 gttgattcag gcgtaggctt ggtcgttgtg attaccgaag gcgtacctac tttggacatg
    33901 ctcaaagcca aacgttattt ggaaaccaac ggcaacggta cccgtttggt cggccctaac
    33961 tgcccgggcg tgattactcc gggcgagtgc aaaatcggta ttatgccggg ccacatccac
    34021 actccgggcc gcatcggtat tatttcccgt tccggtacat tgacttacga agccgtggca
    34081 caaaccacca aactgggctt gggtcaatca acctgtattg gtatcggcgg tgacccgatt
    34141 cctggtatga accaaatcga cgcactgaaa cttttccaag aagacccaga taccgacgcc
    34201 atcatcatga tcggtgaaat cggcggtact gcggaagaag aagcagccga atacatccaa
    34261 tccaacgtaa ccaaacctgt tgtaggttac attgctggtg ttaccgctcc taaaggcaaa
    34321 cgtatgggcc acgccggtgc gattatttcc ggcggcaaag gtactgccga ggaaaaattc
    34381 gccgctttcg aaaaagccgg tatcgcttac acccgcagcc ctgccgagtt gggcacgacg
    34441 atgctggaag tgttgaaggc aaaaggtttg gcataatcag gtttgacaac tgattaaaca
    34501 tcaaatgccg tctgaaaccg gaaatcgggt ttcagacggc attttgtttg tcatttcaaa
    34561 aagaggcagc ctcaacatac ccacattatt ttttgccctt tgaggcagtc agaatattta
    34621 tcggtcaaac aggagcaaac ccgtaagtca ggttgcacat atttttttga agtcagggaa
    34681 tgataagtat cgcatttgaa aagactgata ttatttttgc aggattctgt tttagcacgc
    34741 gacattcttt gtttgatagg attagaatgg atatagtccg cgtaacactg caaatccgtt
    34801 tcatcgcgca cggtgtgttc gtaaaaacgc cgttgccaaa taccgcgttc gttccgccgc
    34861 tgtttgccgg cggataagtt tttagtataa ggggaatatg cggagaattt ggttttaatc
    34921 agccgccgga gtagggaata atccgcatcg tcgggcggca gcgtccaaat ggcgtggata
    34981 tggttcggca gcacgcatac ggcgacggtt tcaaagggat attgtttttg cacatccata
    35041 taagccgtac gcgaagccga tatgttcgac aagcaggcgc gatttcgggt cggcgagttt
    35101 gacggtgaaa aagaatgtgc cgccggcaat gaagtttctg cgataacgcg ccataggatt
    35161 tttgtttgtg gtttgggtgt tggagaagga atggtttgtt gtttaaggtt ttaactttgt
    35221 tggagctgat gttttcagac gacattggag gccgtctgaa agcgctggct tcaacgaagt
    35281 taaaagttgg aacggcaaac cgttaatcaa ccaaccgcgt acgtaccgca cacacactgc
    35341 acgttggctt tgaagtttcg tagactcaca ggtaggtgtg gcgcaaccac gcatacggtg
    35401 ggttgggtat aaaggctaca acttgctata gcttgcttgc tattcaaaat aagaatgctt
    35461 aattgctgtt gctaattgag cagcaaggat gggaggaacg gcattaccaa cctgcgtgaa
    35521 ttgccgcgca accgctcctg taaaaatata atcatcagga aacgtttgta atcgtgcact
    35581 ttcacgaaca gataacgttc ttgggatata tggatgtaag tgagaccttc ctccaccttt
    35641 agtgccacca gcaataatag ttttagatgg tttgcttgga tctaacctat ctacacgtcc
    35701 ctttttatca cgttgcccat aagctaattc catatagcgt aaaatcgatt cagccgaatg
    35761 ttctcttgta atatggttat gttggttaat aattggaatt tcaaatgtat taccacatgc
    35821 caatggggta ttggttggtt gtagcggact aaatttttta tctcctaaat aaccaattat
    35881 aaatagccta attctctgtt gaggtacatg aaaatattca gaattaatta tttgaggttt
    35941 atagagtgag tagccttgct gctgtaaatc acaatataca ctagctaact gtttaccatt
    36001 atctatatcc atcaatccag agacattttc aataagaaat actttaggac gaaaaatctt
    36061 aatcaattca acgtaattaa ataatagatt accattttgc ttatgctcaa agccgacacg
    36121 tttaaaattt ttatcagttt ttgagaatct ctggtttgag gctatggaga aaggctgaca
    36181 gggaggacct ccaataaata caccatcaaa acttaaagac ccaatattat ttctgattag
    36241 ttcaaccatt tcttctgttt cagaaacatc agcattaaac acagaccaat tagggcgatt
    36301 aagacgcaat gtatcacaaa ataaaggtat tttttcaatc agcatagaat gttgaaagcc
    36361 tgctgcttca aaccctaagt ctaatccacc ggctcctgaa aaaaaactaa ttatcggaat
    36421 gtgattttcc tttttttgaa aatcacttag aaccaaattc tttctctttt caaaaggctt
    36481 tttatcatga tgaatataaa ttaaatcatc atagctcatt tgattttggc gtattagttc
    36541 attcaatgga ataccttgta ataaactttg ttctaataat tttctttgtg aaataattct
    36601 attattttct tggtcaaata aagaggtttg cggtattaac atagatactc ctatctattt
    36661 ataaattctt ttaactttac ttttagcttc ttcatataca tgatatgctt cttcataact
    36721 aacaaaatct tttttcttgt gcaaattaag ccaaaaagta tagtacttgt gtgtggcacg
    36781 atgacaggtt ggacagatac caaccaaatc ttttaatgaa gtagttttat cttctaccct
    36841 tacaggagaa gatagtggta atagatggtg tacttcaatg atatgttcgc tccattcata
    36901 gctcctttgc gtatctaatc cacacatgcg acatatttgt gcattttggg tcttgctaaa
    36961 atagattttt cttaaaatac tattacgttc tgtaattaaa tgggtgactt taattttacc
    37021 accctcacta aacgcctgat catcaataga taatgaaacg atttcattca tcaataagaa
    37081 attattattt gtcttaccca atctcattat ctctaaacta tctaatcttt cttgtggttg
    37141 tgtatctgca ataaattggt tttctaataa atgtagttca ctaaaatctg taatatctaa
    37201 aaacaactta ttttcatacc aagacaaaaa agagaattga ctaataaact ttaccaactc
    37261 tctaatttga cgaggatcat atttaattgc ttctttattc ataattaact gtgagaatga
    37321 aaaagaagca atacctgtaa tactattatt actagcgatt ttgtaaataa tttcatccat
    37381 gtccaaaaaa ttaactcctg tttccttata ttttgaaatt aaagctctaa taattgccaa
    37441 aacagggaaa acccgatttt cagatggttg atatcctgaa aaagctggtg atgggtagga
    37501 aaaatgtgtt gcaaaatgta gtaaataatc atcgcaacta atttcatcat tctgaactaa
    37561 atcggcacat aaatctgtag tacagattaa cccattatgc tccgttgcga gtaacaaaca
    37621 tttaaaaaca cgaccataat tacgccaaac tggatattgt gaactgttag gggcaaaagg
    37681 taagtttgtc tcttgagtca ggcttaatct tacaatatca atatcttttg cacgtggctt
    37741 tggacattga ttaattccat ataatccttt tgcaattttt ttaatttcat caaatctaaa
    37801 ataatctaat ctaccttgat caaaacgcca ttcaatcatt tttaacctct atgaaatatc
    37861 atttttcagt aatctgaaaa ttatcctaaa accaccttca aatacttccc agtataactc
    37921 cccttaacct tcgccacttc ctcagggcta ccttgggcaa taatcctccc cccgctatcg
    37981 ccaccttccg gtcctaaatc tacaatccaa tccgcagttt taatcacatc cagattatgc
    38041 tcaataatca caatcgagtt gcctttgcct ttcagacggc ctatgacttc cagcagcagg
    38101 gcgatgtcgg cgaagtgcag gccggtggtg ggttcgtcga ggatgtagag cgttctgccg
    38161 gtgtcgcgtt tggagagttc caaggcgagt ttgacgcgct gggcttcgcc gccggagagg
    38221 gtggtggcgg actggccgag gcggatgtag ccgagaccta cgtccatcag ggtttgcagt
    38281 ttgcgcgata cggtggggac ggcgtcgaaa aattcgcggg cttcttcgac ggtcatgtcg
    38341 aggacttggc tgatgttttt gcctttgtat tggatttcga gggtttcgcg gttgtagcgt
    38401 ttgccgtggc agacttcgca ggggacgtac acgtcgggca ggaagtgcat ttcgacttta
    38461 atcacgccgt cgccttggca ggcttcgcag cggccgcctt tgacattgaa ggagaatctg
    38521 ccgacgttgt agccgcgttc gcgcgagagg gggacgccgg cgaagagttc gcggatgggg
    38581 gtgaacaggc cggtgtaggt ggcggggttg gagcgcgggg tgcggccgat gggggattgg
    38641 tcgacgttga tgactttgtc gaggtgttcg aggccgcgga tgtcgtcgta tggggcgggt
    38701 tcttcttggg cgcggttgag ttcgcgggcg gtgattttgg cgagggtgtc gttaatcagg
    38761 gtggatttgc cgctgccgga tacgccggtg atgcaggtaa tcaaaccgag cggcagttcg
    38821 agggtaacgt ttttgaggtt gttgccgcgc gcgcctttga ggacgagcat ccggtcggga
    38881 ttgacgggtg tgcgttcaga cggcacggca atggattttt tgccgctgag gtattgtccg
    38941 gtaatggagt tttcgcattt ggcgacgttt tcgggtgtgt cggcaatcag tacgttgccg
    39001 ccgtgttcgc cggcgcccgg gcccatatcg acgacgaaat cggcttcgcg gatggcatct
    39061 tcgtcgtgtt cgaccacaat cacgctgttg cctaaatcgc gcaggcgttt gagggtggcg
    39121 agcaggcggt cgttgtcgcg ctggtgcagg ccgatggagg gttcgtccaa aacgtacatt
    39181 acgccggtca ggccgctgcc gatttggctg gcgaggcgga tgcgctgggc ttcgccgccg
    39241 gaaagggttt cggcggaacg ggagagattc aggtaatcca gcccgacatt aatcaaaaag
    39301 ccgagacgtt cggtgatttc tttgaggatt ttttcggcga tttgtttttt gttgccgtct
    39361 aaatccagtg tttcaaagaa ttggtgggtt ttggtgagcg gccaggcgga aacttcgtgc
    39421 aacggctcac cgctgacgta aacgtagcgg gcttctttgc gcaaacgtgc gccgccgcag
    39481 ctcgggcagg cgcggtggtt ttggtattcg cgcagttttt cgcgcacggt ttcgctgtcg
    39541 gtttcgcggt agcggcgttc gagattgggg atgatgcctt cgaaggcgtg gctgcggttg
    39601 aaggtggtgc cgcgttcgga caggtaagtg aaatcaatga cttccttgcc cgagccgtgc
    39661 aacacgactt ttttgatttt tgcaggtagg gtttcccaag cagcctgcac gtcgaaaccg
    39721 taatgccgcg ccagcgactg aatcatttgg aaatagaact ggttgcgctt gtcccagccg
    39781 tcaatcgcgc ccgaagccag cgacaattcg ggatgcgcga ccactttttc ggagtcgaag
    39841 aaattggtgt tgcccaagcc gtcgcaagtc gggcaggagc ccatcgggtt gttgaacgaa
    39901 aagaggcgcg gctccaattc gggcaggctg tacgaacata cggggcaggc gaaacgcgcg
    39961 gaaaaccaat gctcttcgcc gctgtccatt tccatcgcca gcgcgcgctc gttgccgtgg
    40021 cgcagcgcgg tttcaaaact ttccgccagc cgctgcttga tgttcgcctt cactttcacg
    40081 cggtcgatga ccacgtcgat attgtgtttg atgttttttt ccagcttcgg cacttcgtca
    40141 agctgataga cctcgccgtc cacgcgcaca cgggcaaagc cttgcgcctg caagtcagca
    40201 aagaagtcga caaactcgcc cttacgctca cgaactgccg gcgcaagaat catcacgcgc
    40261 gtgtcttccg gcagttttaa tacggcatcg accatctgag atacggtttg gctggatagc
    40321 ggcagattgt gttcggggca atacggcgtg ccgacgcgtg cgtacaaaag gcgcaggtaa
    40381 tcgtggattt ccgtaaccgt gccgacggtg gaacgcggat tgtggctggt ggatttctgc
    40441 tcgatggaaa tcgcgggcga cagaccctcg atcaaatcga catcgggttt gtccatcatc
    40501 tgcaaaaact gccgcgcata ggcggacagg ctctcgacat aacgccgctg tccttcggca
    40561 tacagcgtgt cgaacgccag cgatgatttg ccgctgcctg acaatcctgt taccaccacc
    40621 agcttgtggc gcggaatgtc taaatcgacg tttttcaaat tatgcgtgcg cgcgccgcgt
    40681 atgcggatgg tgtcgttgtc gtgcgaatgt tggggatgat ggttgcacat aatggatgcc
    40741 gcctgaaaaa taaaggaaaa ctggtattgt agcactttct cggatgccgt ctgaagccgc
    40801 gttcagacgg catttgtcgg cggagtacgg cagattccgc tataatgtcg gcaattttaa
    40861 cccgcttgaa caaaaggatg acaaatgaac cgtctttacc cccacccgat tatcgcccgt
    40921 gagggctggc cgattattgg cggcggtttg gctttgagcc tgctggtgtc gatgtgttgc
    40981 ggctggtggt ctttgccgtt ttgggtgttt accgtatttg ccctgcagtt tttccgcgac
    41041 cctgcgcgtg agattccgca aaatcctgaa gcagtgttga gtccggttga cggccgtatc
    41101 gtggtggtcg agcgcgcacg cgatccgtat cgtgatgtcg atgctttgaa aatcagtatt
    41161 tttatgaacg tgttcaacgt gcattcgcaa aaatcgcctg ccgattgtac ggtaacgaaa
    41221 gtggtctata acaaaggcaa attcgtgaat gcggatttgg acaaagccag cacggaaaac
    41281 gaacgtaatg cggtgttggc gactacggct tccggtcgtg aaattacttt tgttcaagtg
    41341 gccggtttgg tggcgcgccg tattttgtgc tacacccaag caggtgcgaa actgtcccgc
    41401 ggcgaacgtt atggctttat ccgcttcggt tcgcgcgtgg atatgtatct gcctgtcgat
    41461 gcgcaggcgc aagtggcgat tggcgataaa gtaactggcg ttagcactgt attggcgcgt
    41521 ttgccgctga ctgcgccgca aatcgaatcc gagcctgagt ctgagcctgc tttacaaact
    41581 gctccggttg aaacagcggc aaacccatct gccgaacaac ggcaaatcga ggcagcggcg
    41641 gctaagattc aggcggctgt gcaagatgtg ttgaaagatt aattttgcga actgaaatag
    41701 aaaatatcag taccatcatt cacacgaatg aggaagtttg gttttttgaa tttttgctaa
    41761 tgttcacacc gttatgttca cgaaaatggg aatctggaaa tttaacgtta cggtgattta
    41821 tcagaaatat agtggattaa atttaaacca gtacggcgtt gcctcgcctt gccgtactat
    41881 ttgtactgtc tgcggcttcg tcgccttgtc ctgatttaaa tttaatccac tataacagaa
    41941 actgaacgaa ttagattccc gcctgcgcgg gaatgacaac tcattagtta cctaacactt
    42001 aaaaaacaga aacctttccg cgtcattccc acgaaagtgg gaatccggga acttaacgtt
    42061 acagtgattt atcggaaacg actgaaaccg aagagaccgg attcccgcct gcgtgggaat
    42121 gacaactcat tagttaccta aaacttaaaa aacagaaacc tttacgccgt cattcccacg
    42181 aaagtgggaa tccgggaact taacgttacg acgatttatc ggaaacgact gaaaccgaag
    42241 agaccggatt cccgcctgcg tgggaacgac aactcattag ttacttaaaa cttaaaaaac
    42301 agaaaccttt acgccgtcat tcccacgaaa gtgggaatct agaacccaaa tgctaaggcg
    42361 atttatcgga aacggctgaa accgaacgaa ttggattccc gtctgcgcgg gaatgacgac
    42421 tcattagtta cctaaaactt aaaaaacaga aacctttacg ccgtcattcc cacgaaagtg
    42481 ggaatccggg aacttaacgt tacagtgatt tatcggaaac ggctgaaacc gaacgaattg
    42541 gattcccgcc tgcgcgggaa tgacgactta ttagttacct aaaacttaaa aaacagaaac
    42601 ctttacgccg tcattcccac gaaagtggga atctagaacc caaatgctaa ggcgatttat
    42661 cggaaacggc tgaaaccgaa tgaattggat tctcgcctgc gcgggaatga cgggatcttg
    42721 ggtttctgct tttgattttt ctgcttttgc gagaatgacg gcgtgaaagc aagaatgatg
    42781 aaacaaagaa aatgggaatg atggcatagt ggtttgttct ttgtctttgc catatttcct
    42841 aaaaaattga ttaaaaaagg ttttcagaat gccgtctgaa aacctttttt ctgcctgtcc
    42901 gattttaaaa cttcacgttc acgccgccgg taaagctgcg gcccatttgc ggcgtatcag
    42961 agagaaagct gctgtgggcg taaacggatt ggttgagcag gttgtcggct ttgacgtacc
    43021 aattccactc gccatagcgc gtattgcggc ggtagtttgc gccgaggttg agcatatggt
    43081 gtccgggcgt acgcgtttcg tagcgggcga gtttgttttg ggcgaacacg cggtagtagt
    43141 ccaagttggc atcgatgagg tcggtcagcg aggctttcag gtgaacgccg aggcgcgcag
    43201 ccggaacgcg cggcgcgttt tggtcggctt gtgcgatgaa gggacgcttg ccgtaagcat
    43261 cttccctgcc gggtagggaa ggcaggtttt tcagacggcc tcgtacatag tcgccggaaa
    43321 caccgatgcg gtagcgcggt gtcggtttga agtagatttc accttccgcg ccgtagaagt
    43381 ctgcgccgga ttggttgtag cgcacgagct tcatttcgct gtcgtcttcg atggatttgg
    43441 ggccgcgtcc gtcgtttaag gtttgggcgt aaatgtagtt gccgaagcgg ttgcggtaga
    43501 gtgccagatt gtattgccag cggtcgcctt cgtagcccaa cgcgagttcg atgttgttgg
    43561 aacgctcttt gttcaggtgt ttgttgccga cttcaaaagt gttggtggca acgtgtttgc
    43621 cgtgtgcgta cagctcttgc gttgacggca ggcgttcctg atgggaggcg gtcaggctga
    43681 gtttgtgttg cggcgtgaaa taccagttgc ccgaaagtgc gaacgagcgg gcggtttggc
    43741 ggtgcgcgcc gaggtcgggc agggggtggt tgtagtagtt ttcccgatca atcaatgctt
    43801 tgtcgtaccg gatggaggct ttttgttttt ccacgcgtac gccgccttca agcgtgaagt
    43861 tgtcccagtt tgcctgttct acaccgaaaa agctgtaatg gcgcacattg ttgtcaatca
    43921 acatcggttg tttgaccgct tcggatgtgg cagataaagc actggatttt tgttgtaaat
    43981 attgcacgcc ccagctgcct ttcagacggc ctatgggttg gtggcgcaac tcgatgcggg
    44041 cgttttgcgt tttgtttttg aagaagtttt ccactgcatc gcctgctttt tcgtcgtggc
    44101 ggtagtcgtt gcggttcaag tatacgcgca gggcttcaaa accggggaac ggttgcttcc
    44161 attcggcacg gagttcgtag cgtttgttgc gcaggtctat ccacggtctg ccgctgtggg
    44221 tgtgtgcgtg tgcattatcg tcgtcgtgga agccgcagct caagcccgga ttgtcgtaat
    44281 cgatgtcttc ttcggtcaac aggtgcggat aaagctgtaa atagcgtttg ttaatcaagc
    44341 tcttttgcca gatgatgtcg gcgtggcaat catcgtattc gtggctgtgg gcaggcagac
    44401 catattggtc gcgacggtcg ctgtacgcta cgccgataaa acctttttcg ccaacccaag
    44461 acagcccgat gctgcccgtt tgcgaatcgg cgcggctgtc gggcaggcgt ttcagattgc
    44521 ggtaacgcgg tacggcgtaa tcgcccgatt tgcggtacaa gccttccgta tgcaatacaa
    44581 agtttttgcc caagccgata ttgatgcctg cggatgtcag tttttccaaa ttgccgctgc
    44641 tcaaacgcaa tccggcttcg cccgatacgc cgttttcagg cattttttcg ggaattttat
    44701 tgtcggcaac atcaaccagc cccgcgacat tgcccgaact atataaaagc gtaaccgggc
    44761 cgcgcaggat ttcgacctgt tgcgacaagg cggtatctac cataatggcg tgatcgggcg
    44821 aaaaatccgc catatcgccc gtttcgccgt gatggttcaa aaccttaatc cgcctgcctg
    44881 tttgaccgcg tatcaccggt gcggacgcgc cgccgccgta ttgcgaggcg tgaatacccg
    44941 gtacgccgtc caaagcatcg cctaagttga cggctttttg gcgcaaggta tcgccggaga
    45001 tgattttgtc ggaggcggtc gaagtgtgca gcagccccga agtggcgcgc ggacggcttt
    45061 tgccgacgac gctgaccgtt tccaaatcca ccgattgctc agtttcatgc gcttgggcga
    45121 ggaggggtgt gttgattaaa agaattgata aaacaatggg tttgagtgta gtttgtgcca
    45181 ttttggtttc tcgtcgcatt tcaaaagttt gttattatat aacattacat tccttatatc
    45241 ataagatttt gagaacactc agagggcata ggcaaaagtt tttcaaatga aacggttgcg
    45301 gcatcgggcg gtgtccattt gtatccgccg tccttcgggg gcgcggttga tgttgacgca
    45361 gattccgctg tgtttgccca ttatgttcgg ctgcgggata accaaaattt atgagtgcat
    45421 aaaaacggta cgttcccgaa cggtcgaaaa ggtggcaaaa tggcgtactt gtcagaacgc
    45481 gaggctctgc gccaggttca cgagggtgca tcgggcacgc taagatataa gagggtatgg
    45541 atgggggtat cggaaatgca gttaataaca aacaaattat aaatcaatag gttaataaca
    45601 aaatgctttt gtttatcgac aattacgaca gttttactta caacatcgtc cagtatttcg
    45661 ctgaattggg gcaggaagtc gccgtgcgcc gcaacgatga tattacgttg gaagaaatcg
    45721 aggcattgaa tccgcaatat ctcgttatcg gacccggtcc gtgttcgccc aaagaagcgg
    45781 ggatttccgt ggcggcgatg cgccattttg ccggccggct gccgattatg ggcgtgtgcc
    45841 tcgggcatca gacgataggc gaggcgttcg gcggcaggat agtccgcgcc aaaacgctga
    45901 tgcacggtaa ggtgtcgccc gtgtcccatt cgggcaaggg tatgtttaaa ggtttgccca
    45961 atccggttac ctgtacgcgt tatcacagcc tcgttatcga tcgggataat ttgcccgatt
    46021 gtttggaaat cacggcttgg actgacgacg gcgagattat gggcgtgcgc cataaggaat
    46081 atgccgtcga gggcgtgcag ttccaccccg aagccctctt gaccgaacac ggacatgata
    46141 tgttgaacaa ttttttaatc gaatttcaaa acttcaaacc gcaaaaaatc tgacgcgatg
    46201 ccgtctgaag gcttcagacg gcattttcgt ccgaatattg aacggaggac aaaaaatgat
    46261 tacaccgcaa caggctatcg aacgattaat cagcaataac gagttgtttt acgatgaaat
    46321 gaccgacttg atgcgtcaga ttatgagagg acaggttctg ccggagcaga tagcggccat
    46381 tttgacagga ttgcgtatca aggttgaaac cgtttccgaa attaccgcag ctgcagccgt
    46441 catgcgcgag tttgcgacaa aagtgccgct ggagaatgca gaggggctgg tcgatatcgt
    46501 cggtacgggc ggggatggtg ccaaaacctt caatatttcg acgacctcga tgtttgttgc
    46561 cgcagcggca ggcgcgaagg ttgccaaaca cggcgggcgt tccgtttcat cttccagcgg
    46621 cgcggcggac gtggtggagc agatgggcgc aaacctcaac ctgactcccg aacagattgc
    46681 tcaaagtatc agccagaccg gtatagggtt tatgttcgcc cccaatcacc acagtgccat
    46741 gcgccatgtc gccccggtac gccgttcgct cggtttccga agcattttca acatattggg
    46801 tccgttgacc aatcctgcgg gcgcgccgaa ccaacttttg ggcgtgttcc acaccgattt
    46861 gtgcggcatt ttgtcgcggg tcttgcaaca acttggttca aaacacgttt tggtcgtttg
    46921 cggggagggc ggcttggatg aaattacact gacgggcaaa acgcgcgttg ccgaactcaa
    46981 agacggaaaa atcagcgaat acgacatccg cccagaagat ttcggtatcg aaacccgccg
    47041 caatttggat gaaatcaaag ttgccaatac tcaggaatct ttgttgaaaa tgaatgaggt
    47101 gctggatggg aaagaagggg ctgcgcgcga tatcgtattg cttaataccg ccgccgccct
    47161 atatgccgga aatgtcgccg cttcgctttc agacggcata tctgccgcac gggaagccat
    47221 cgattcaggt agggcaaaat cgaaaaaaga ggagtttgtc ggttttcaac cacaacaaag
    47281 atgccatttt cttggaaaga tggagcttgg gtgatgccgc catgattatg gaacttttgt
    47341 ggcaaaacat aagcacttca cgaagagaac ttaccaaact gtttttatat aaaaacttgg
    47401 ggctgtacta gataaccaga ccaaattccc attaactaat tgtcttaaaa tctgaatttg
    47461 agattctatt taaaatgcca ttggcatttc tttaaatgca gccccaaatg ctctttggga
    47521 atgccgttaa acttacgtaa atggctaaat tcactaatat caagcacatc ataactacga
    47581 aaggtatccg tgtatacaat gccatcaggc ttaactttct ttcggataat tggcaacaat
    47641 gtcgctgatt gcgcattagg aacaacgacg gta
//
LOCUS       DBBZYD010000003        47061 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.003, whole genome shotgun sequence.
ACCESSION   DBBZYD010000003 DBBZYD010000000
VERSION     DBBZYD010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 47061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47061
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.003"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(205..3690)
                     /gene="smc"
                     /locus_tag="ACJJDL_000114"
     CDS             complement(205..3690)
                     /gene="smc"
                     /locus_tag="ACJJDL_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HGG7572914.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVRALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQE
                     QQQIRVQLEENELQTEEKQTELAEWAMQVAEHEERLPELEEAQATLNAAFQIQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSQ
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATDYAAAPQLWQHITAPTEWQHALSVILAERLHARSVPHGFVPPAPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLNYALAHQSDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELDNLAPELSAAEAAFKQAE
                     AAVRSSETQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIVRELAQLAEE
                     QTVLQHASDGLSDDIAILQEAAAELEHQQQTAAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIAQLEQQTLDWQERQQELALAYETEFQNDEQHIKLDELT
                     EAVHTLDEEYIVVQEKLAQIQEQGREQYARVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITILEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            3692..3943
                     /locus_tag="ACJJDL_000115"
     CDS             3692..3943
                     /locus_tag="ACJJDL_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572915.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            3940..4674
                     /gene="lpxH"
                     /locus_tag="ACJJDL_000116"
     CDS             3940..4674
                     /gene="lpxH"
                     /locus_tag="ACJJDL_000116"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HGG7572916.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLENAENAV"
     gene            4930..6516
                     /locus_tag="ACJJDL_000117"
     CDS             4930..6516
                     /locus_tag="ACJJDL_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HGG7572917.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     DDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6684..6887)
                     /locus_tag="ACJJDL_000118"
     CDS             complement(6684..6887)
                     /locus_tag="ACJJDL_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HGG7572918.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            7003..7500
                     /locus_tag="ACJJDL_000119"
     CDS             7003..7500
                     /locus_tag="ACJJDL_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HGG7572919.1"
                     /translation="MTALTLPEDIRQQEPSALLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            7582..8775
                     /locus_tag="ACJJDL_000120"
     CDS             7582..8775
                     /locus_tag="ACJJDL_000120"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HGG7572920.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAIRAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVALLKAKG
                     ASQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(9179..10114)
                     /gene="hemC"
                     /locus_tag="ACJJDL_000121"
     CDS             complement(9179..10114)
                     /gene="hemC"
                     /locus_tag="ACJJDL_000121"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HGG7572921.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYTRLEEMPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLKLDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHGVTNACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10233..10748
                     /gene="ybeY"
                     /locus_tag="ACJJDL_000122"
     CDS             10233..10748
                     /gene="ybeY"
                     /locus_tag="ACJJDL_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HGG7572922.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAANLPSEHDFYRWAWSAL
                     KSGYRRADISLILLDEEAARAYNRDYRGKDYATNVLSFALNEGETLPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMRAA
                     GYPNPYREDGH"
     gene            10750..11574
                     /locus_tag="ACJJDL_000123"
     CDS             10750..11574
                     /locus_tag="ACJJDL_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HGG7572923.1"
                     /translation="MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(11703..13082)
                     /gene="nhaC"
                     /locus_tag="ACJJDL_000124"
     CDS             complement(11703..13082)
                     /gene="nhaC"
                     /locus_tag="ACJJDL_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HGG7572924.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHCYSLIPFALLVVLALMRINAVVAMLFTVMVAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDVVKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GVIPSLLEAIRTFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDRLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13373..14596)
                     /locus_tag="ACJJDL_000125"
     CDS             complement(13373..14596)
                     /locus_tag="ACJJDL_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HGG7572925.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
     gene            15186..15599
                     /locus_tag="ACJJDL_000126"
     CDS             15186..15599
                     /locus_tag="ACJJDL_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HGG7572926.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVHRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLAFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            15645..16274
                     /gene="nth"
                     /locus_tag="ACJJDL_000127"
     CDS             15645..16274
                     /gene="nth"
                     /locus_tag="ACJJDL_000127"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HGG7572927.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            16412..17911
                     /locus_tag="ACJJDL_000128"
     CDS             16412..17911
                     /locus_tag="ACJJDL_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HGG7572928.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIKHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSSNAENDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLRAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            18113..19633
                     /locus_tag="ACJJDL_000129"
     CDS             18113..19633
                     /locus_tag="ACJJDL_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HGG7572929.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETTVSDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            19690..20775
                     /gene="nagZ"
                     /locus_tag="ACJJDL_000130"
     CDS             19690..20775
                     /gene="nagZ"
                     /locus_tag="ACJJDL_000130"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HGG7572930.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTGEEKQRLLDPAVGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHSNPEAVTRLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLIPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELRDDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQAAQAFVAALASPQDTAGGVKVGEAF"
     gene            20856..20932
                     /locus_tag="ACJJDL_000131"
     tRNA            20856..20932
                     /locus_tag="ACJJDL_000131"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20890..20892,aa:Pro,seq:cgg)
     gene            complement(21267..21905)
                     /locus_tag="ACJJDL_000132"
     CDS             complement(21267..21905)
                     /locus_tag="ACJJDL_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HGG7572931.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLNPAPPQIDYVATSPKACYAAKYENSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(21902..22273)
                     /locus_tag="ACJJDL_000133"
     CDS             complement(21902..22273)
                     /locus_tag="ACJJDL_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HGG7572932.1"
                     /translation="MKLLFILLVLFVAVEHFYIAWLEMTQIPSEKAAETFKLPYEFME
                     QNRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGVTVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(22378..22503)
                     /locus_tag="ACJJDL_000134"
     CDS             complement(22378..22503)
                     /locus_tag="ACJJDL_000134"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572933.1"
                     /translation="MKSMDIRFARIAALTKQLAAIQRQIEKRAYKAKAATMKKVA"
     gene            complement(22523..22879)
                     /locus_tag="ACJJDL_000135"
     CDS             complement(22523..22879)
                     /locus_tag="ACJJDL_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572934.1"
                     /translation="MNTTSSMIQEEGIIAESIDVINKFVQFLLKLYDDFGIDGMHDLV
                     DPDLDTLESIVKNLQQEVDKLPISPNDFSLENKKISLAQGLLYAQSMITNVRNKDTEE
                     CSRNRSMLKNNQSSLY"
     gene            complement(22988..23410)
                     /gene="queD"
                     /locus_tag="ACJJDL_000136"
     CDS             complement(22988..23410)
                     /gene="queD"
                     /locus_tag="ACJJDL_000136"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HGG7572935.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGIIKGG
                     AKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNSRECQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(23417..23935)
                     /locus_tag="ACJJDL_000137"
     CDS             complement(23417..23935)
                     /locus_tag="ACJJDL_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HGG7572936.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTKMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            complement(23963..24622)
                     /gene="queC"
                     /locus_tag="ACJJDL_000138"
     CDS             complement(23963..24622)
                     /gene="queC"
                     /locus_tag="ACJJDL_000138"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HGG7572937.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERASWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            complement(24826..25012)
                     /locus_tag="ACJJDL_000139"
                     /pseudo
     CDS             complement(24826..25012)
                     /locus_tag="ACJJDL_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            25167..26393
                     /locus_tag="ACJJDL_000140"
     CDS             25167..26393
                     /locus_tag="ACJJDL_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HGG7572938.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(26414..26695)
                     /locus_tag="ACJJDL_000141"
     CDS             complement(26414..26695)
                     /locus_tag="ACJJDL_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7572939.1"
                     /translation="MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(26774..26908)
                     /locus_tag="ACJJDL_000142"
                     /pseudo
     CDS             complement(26774..26908)
                     /locus_tag="ACJJDL_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(26907..27365)
                     /locus_tag="ACJJDL_000143"
     CDS             complement(26907..27365)
                     /locus_tag="ACJJDL_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572940.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(27928..28131)
                     /locus_tag="ACJJDL_000144"
     CDS             complement(27928..28131)
                     /locus_tag="ACJJDL_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572941.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKESLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
     gene            complement(28671..29606)
                     /locus_tag="ACJJDL_000145"
     CDS             complement(28671..29606)
                     /locus_tag="ACJJDL_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HGG7572942.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPEAIDYVDERKGVP
                     LAAMRHILMYTEAAASHAYLFEHDLNKFKQYAYVAGKLGILRSVNSTDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLVHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
     gene            complement(29609..32143)
                     /locus_tag="ACJJDL_000146"
     CDS             complement(29609..32143)
                     /locus_tag="ACJJDL_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7572943.1"
                     /translation="MLKTPPTLAAELSGKTGVSISAPYANENSRILLSTTDISSENGK
                     IKIQSYGDQYYYARQSELYTFERRSYKTGKWYNRKHITEVKEHKNAKPDAVNLSASQG
                     IDIKSGGSIDAYATAFDAPKGSINIEAGRKLTLYAVEELNYDKLDSQKRRRFLGISYS
                     KAHDTTTQVMKTALPSRVVAESANLQSGWDTKLQGTQFETTLGGATIRAGVGEQARAD
                     AKIILEGIKTTIHNETVSSSKSALWQKQAGRGSNIETLQLPSFTGPVAPVLSAPGGYI
                     VDIPKGNLKTQIETLTKQPEYAYLKQLQVAKNINWNQVQLAYDKWDYKQEGLTEAGAA
                     IIALAVTVVTSGAGTGAVLGLNGAAAAATDAAFASLASQASVSFINNKGDVGKTLKEL
                     GRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAVNG
                     GSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIAHKIAHAVAGCAAAAANKGKCQD
                     GAIGAAVGEIVGEALVKNTDFSRMSATEIEKAKAKITAYSKLAAGTATAVAGGDVNAA
                     ANAAQIAVENNTLYPKCIGAKCDEFQKEQQKWIRENPEEYREVLLLQTGFIPIIGDIQ
                     SFVQAQTAADHLFALLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYV
                     SKTKIKIGQTELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRVLSGGKY
                     GGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSEDWIKQVANSLPD
                     GSPAKAAVFKAEREGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            complement(32288..32719)
                     /locus_tag="ACJJDL_000147"
     CDS             complement(32288..32719)
                     /locus_tag="ACJJDL_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572944.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTNCSLHET"
     gene            complement(32735..38680)
                     /locus_tag="ACJJDL_000148"
     CDS             complement(32735..38680)
                     /locus_tag="ACJJDL_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7572945.1"
                     /translation="MNKGLHRTVFSKKHNTMVAVAETANSQGKGKQAGTSAPASPQIS
                     DGLYSKLKTTLKTLVCSLVSVSMVLPAHAQIITDKTAPKNQQAVILKTNTGAPLVNIQ
                     TPNARGLSHNRYTQFDVDAKGAVLNNDRNNNPFLAKGSAQLILNEVRGAASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGTPQIGKDGALTGFDVRQGTLTVGT
                     SGWNDKGGADYTEVLARAVALQGKLQGKNLAVSTGAQKVDYASGEISAGTAAGTKPTV
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADS
                     TEASPTYLSIETTETGAAGAFISNGGRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPA
                     ATVLNAGRNLVIESKANVNNAKGSTNLSTGGRTVIKEASIQTGTTVYSSSKGNAELGN
                     NTRITGADVTVLSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGT
                     SKTLTASKDMGVEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSAKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNYSKNELNETKL
                     PVRVVAQTAATRSGWDTVLEGTEFKTTLAGADIQAGVGEKARADAKIILKGIVNRIQS
                     EEKLETNSTVWQKQAGRGSTIETLKLPSFESPTPPKLSAPGGYIVDIPKGNLKTEIEK
                     LSKQPEYAYLKQLQVAKNINWNQVQLAYDRWDYKQEGLTGAGAAIIALAVTVVTSGAG
                     TGAVLGLNGAAAAATDAAFASLASQASVSFINNKGDVGKTLKELGRSSTVKNLVVAAA
                     TAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAA
                     LVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGAIGAVVGEIVGEA
                     LTNGKNPDTLTAKEREQILAYSKLVAGTVSGVVGGDVNAAANAAEVAVKNNQLSDKEG
                     REFDNEMTACAKQNNPQLCRKNTVKKYQNVADKRLAASIAICTDISRSTECRTIRKQH
                     LIDSRSLHSSWEAGLIGKDDEWYKLFSKSYTQADLALQSYHLNTAAKSWLQSGNTKPL
                     SEWMSDQGYTLISGVNPRFIPIPRGFVKQNTPITNVKYPEGISFDTNLKRHLANADGF
                     SQKQGIKGAHNRTNFMAELNSRGGRVKSETQTDIEGITRIKYEIPTLDRTGKPDGGFK
                     EISSIKTVYNPKKFSDDKILQMAQNAASQGYSKASKIAQNERTKSISERKNVIQFSET
                     FDGIKFRSYFDVNTGRITNIHPE"
     gene            complement(38773..40515)
                     /gene="hrpB"
                     /locus_tag="ACJJDL_000149"
     CDS             complement(38773..40515)
                     /gene="hrpB"
                     /locus_tag="ACJJDL_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HGG7572946.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHK
                     TDLTDATGTETASGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRFHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGGTIPGTSRMKIITAGLDAAAPFMLGKQQF
                     SYETAIHAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLSGERGFYWQNTLGWHFHPRH
                     QFYLGADYGRVSGESAQYASGKRLAGAVAGFRGSHKVGGIFAYDLFAGKPLHKPEGFQ
                     TANTVYGFNLNYSF"
     gene            complement(40672..40824)
                     /locus_tag="ACJJDL_000150"
                     /pseudo
     CDS             complement(40672..40824)
                     /locus_tag="ACJJDL_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117473.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
     gene            complement(41108..41410)
                     /locus_tag="ACJJDL_000151"
     CDS             complement(41108..41410)
                     /locus_tag="ACJJDL_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572947.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            complement(41853..42101)
                     /locus_tag="ACJJDL_000152"
                     /pseudo
     CDS             complement(41853..42101)
                     /locus_tag="ACJJDL_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFP transporter"
     gene            complement(42005..42631)
                     /locus_tag="ACJJDL_000153"
     CDS             complement(42005..42631)
                     /locus_tag="ACJJDL_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HGG7572948.1"
                     /translation="MNRPKQPFFRPEVAVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRATNLFIS"
     gene            complement(42692..43045)
                     /locus_tag="ACJJDL_000154"
     CDS             complement(42692..43045)
                     /locus_tag="ACJJDL_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572949.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRNWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            complement(43038..43265)
                     /locus_tag="ACJJDL_000155"
     CDS             complement(43038..43265)
                     /locus_tag="ACJJDL_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572950.1"
                     /translation="MKNWKQFTFFVILVIACYQVLYFLSDMFLLDYINKYSWNLNFIQ
                     GTLNFFSIYLPYVFVSRIFRNTNQEKEYKND"
     gene            complement(43274..44428)
                     /locus_tag="ACJJDL_000156"
     CDS             complement(43274..44428)
                     /locus_tag="ACJJDL_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG7572951.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLESASWKDINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHIARQVARFAGAHTIVSGYLAFGSDESYKNHWDPRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTATQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKYEEVRKLIYQLIELDFLEIL"
     gene            44682..44975
                     /locus_tag="ACJJDL_000157"
     CDS             44682..44975
                     /locus_tag="ACJJDL_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572952.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPADFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQAVGQRSDGIPANHTKEKP"
     gene            44972..46015
                     /gene="argC"
                     /locus_tag="ACJJDL_000158"
     CDS             44972..46015
                     /gene="argC"
                     /locus_tag="ACJJDL_000158"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HGG7572953.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSKAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPDLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGAIPLLP"
     gene            complement(46166..46291)
                     /locus_tag="ACJJDL_000159"
                     /pseudo
     CDS             complement(46166..46291)
                     /locus_tag="ACJJDL_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT        11169 a        12217 c        11440 g        12235 t
ORIGIN      
        1 aatcaggaca aggcggcgag ccgcagacag tacaaatagt acggaaccga ttcacttggt
       61 gcttcagcac cttagagaat cgttctcttt gagctaaggc gagccaacgc tgtaccgatt
      121 taaatttaat tcactatacc gtctgaaaac ctgtatcgca acacgtcatt aaaaacggca
      181 agattcagcc gttctgcaac ccgttcaaac ggcttccgcc atttccaacg cctgcttgat
      241 gtccacggcg acgacgcgcg atacgccttt ttcctgcatg gttacgccga ccagctgctc
      301 tgccatttcc atggtcaggc ggttgtggga gatgtagagg aactgggttt gcgccgacat
      361 ttctttgacc aggttgcaga aacgcgaggt gttggcgtcg tccagcgggg catcgacctc
      421 gtccaaaagg cagaacggag cggggttgag gctgaacaga gcgaacacga ggctcatggc
      481 ggtgagggct ttttcgccgc cggagaggag gtggatggtg ctgtttttct tgccgggcgg
      541 acgcgccata atggacacac cggcggtcaa aaggtcgtcg cctatcattt tgagagtggc
      601 ttcgccgccg ccgaacaggg tcgggaagaa ggtttggact ttgccgttga cggcgtcgaa
      661 ggtttctttg aaacgcgctt tggttttgtc gtcgatttgg gcgatggctt cttccaaaat
      721 ggtgatggcg gcctgcacgt cttcgctttg gctgcggtag tagccgtcgc gttcgcgcgc
      781 ttcttcgagt tcttgcaggg cggcgaggtt gaccgcgccg agggcttcga tttgttgcga
      841 gaggctgccg atgctgctgt tcaatacttt cggcgattct ttcgccaacg cttcgagcgc
      901 gtccaaatcg gcggcgcgtt cggtcaggtt ttgatggtag cgtttggcgt taatcagggc
      961 ttcctgctgc tgcaacaggg cggtttgggt ggcagcctga agctgcggca gcttggtttg
     1021 caaggtttgt acgcgggcgt attgttccct gccctgctcc tgaatctgcg cgagtttttc
     1081 ctgcacaaca atatattctt cgtccagcgt gtgtacggct tcggtcagct cgtcgagctt
     1141 gatatgctgc tcgtcgtttt ggaactcggt ttcataggcg agggcaagct cttgctggcg
     1201 ttcctgccag tctagggttt gctgttcgag ttgggcaatt tgctgttggt agttttgttt
     1261 ttgctggttg agcttgtgga cggcgacttc ggcaagcccg tattggcggt tggcttccaa
     1321 caaggcaagc tgcgcctgtt tcagacggcc ttgctgctct tggcggctgt gtgcggcggt
     1381 ttgctgctgg tgttcgagtt cggcggcggc ttcctgcaaa atggcgatgt cgtctgaaag
     1441 cccgtcggac gcgtgttgca acacggtctg ttcttccgcc aactgcgcca gttcgcggac
     1501 gatgtgttcg cggcggattt gcccttggtt ggtgcgcgcc agaagttcgg cggcgcgttg
     1561 ctgcgcttgg ctgtattggc gcgtgtgttg ttgttgctgc tgcatcaggt ttttatgctg
     1621 cgtttcagac gagcgcacgg cggcttccgc ctgtttaaac gcggcttcgg cggcggagag
     1681 ttcgggggca aggttgtcca gttcggacgc gatgccgtcg agacgcgctt tttgggcaat
     1741 caggctttcc tgcgcgggtt tggcatagag caggacgctg actttgtcga cctgatggcc
     1801 ttcgggcgtg agccagattt ggtgtgcgcc caaatcgctt tgatgcgcga gggcgtaatt
     1861 caaatcgggc gcgcacaata cgccgtcgag ccagtggtgc aatgccgtct gaaacggcgg
     1921 ctgcgcttgg atttggttca gcaatgcctg tacgggcagg gattttttga tgccgccgga
     1981 gaggccgtct gaaagccacg ccgcctgccc ctgcggcaaa ggcgcaggag gaacgaagcc
     2041 gtgcggcacg ctgcgggcgt gcaggcgttc ggcaagaatg acggacaagg cgtgctgcca
     2101 ctcggtgggc gcggtgatgt gttgccacaa ttgcggcgcg gcggcgtaat cggttgcctg
     2161 ccagaagtcg gcggcttcct gctgttgcga caggatttgc gacaacgcct gctgctgcgc
     2221 ctgcaaggta atgtgttgct gcttcaggct ttggaagcgg tttgaggccg tctgaaacgc
     2281 ctcgcgggcg gcgtgtaagg cttcttcggc ggcgatgatt tgttcttcgt aatgctcttg
     2341 ctggctttgc aacaaggcag cggcctcctg cgcggcggcg gtttccgctt cgtcgggcag
     2401 gttcagggct tggttctcct gtttcagacg gcctttgcgc tcttcgtgct tggcaacggt
     2461 ttgttcggca tgggcaagct gctgctgctt caacgccagt tcgcggcgga tgcggtttgc
     2521 ctcatcctgc tggatttgga aggcggcgtt gagcgtggct tgggcttctt ccaattcggg
     2581 cagacgctct tcgtgttcgg caacctgcat cgcccattcc gccaattcgg tttgcttttc
     2641 ttcggtctgc aactcgtttt cttcaagctg aacgcggatt tgctgctgtt cctgatggat
     2701 gcgctgcatc tgcgcctgcg ccgcctgctt gtcgcgttcg atgcgttggt gcaggttctg
     2761 ctgatggcgg atttgttctt ccaaacgggc aatctgctcg cgcaacacgc cgcgtttgtt
     2821 gctcaattcg tgtaccgcct gctgctgcga ctgttcggcg gtctgcaagg cgcgtacttc
     2881 gtcgtttaac gcctgaacct gcgcggcggt ttcgtcctgc tgcgcctgca aagactgatg
     2941 ctgcgcggtc gccttgtcgg cggcggcaag cgattgctgc cattgggcgt aatcgagcaa
     3001 atcctgctgt tggttcaact gcgcggtcag ggatttgtag cgttcggcgg tttccgcctg
     3061 tttctccagc ttttccacct gacgcgccaa ttcgttctgc aaatcgccca aacgctgcaa
     3121 atgctcgcgc gtgtctttca gacggccttc cgtctccttg cggcgttcct tatatttgga
     3181 cacacccgcc gcctcctcga tataagcgcg caactcctcc ggccgcgctt cgatgatgcg
     3241 cgaaatcatc ccctgctcga taacggcata accgcgcgcg cccacgcccg tacccagaaa
     3301 caaatcagta atatcgcggc ggcgcacggt ctgattgttg atgaaataag tcgattcgcc
     3361 ctgccgcgtc agctgccgct tgatgctcac ctcggcatac tgcccccacg ccccctgcaa
     3421 actatggtcg ctgttgtcaa acaccagctc caccgaagcc ctcggcgcag gacggcgcgt
     3481 cgccgcaccg ttaaagatca cgtcctgcat actctcgccg cgaagctgct tcgccgaagc
     3541 ctcgcccaac acccagcgca ccgcgtcaat cacattcgac ttgccgcagc cgttcggccc
     3601 gataaccgca acaagctgcc ccggcacatg aatcgtggtc gggtcggtaa aagatttgaa
     3661 gccggagagt ttgatatggg tcaggcgcat aatggtcgga aaaaataaaa aagaagcgta
     3721 ttttaacgga aatcccgccg caccacccca tatcttgccg gcaaaacctt accgcatccc
     3781 gcaccctcga tgccgtctga agccttcaga cggcattttt aacgcgcccg aaccccgatt
     3841 ccgccaacgc ccgatgcttg gcgcggcatt tgccgtattg ccccgccgcc gggcgcgtta
     3901 taatccgcca cgacatccgc ccgatttgga aacctgccta tgaaacccgc ctatttcatc
     3961 tccgacctgc atttgagcga aaagcacccc gaactgaccg cgctgttgct gcgtttttta
     4021 cgttcttccg ccgccgggca ggcgcgggcg gtttacattt tgggcgattt gtttgatttt
     4081 tgggtgggcg atgacgaagt ttccgagttg aatacttcgg ttgcgcgtga aatcaggaaa
     4141 ttgtccgaca aaggcgttgc cgtgttcttc gtcaggggca accgcgactt cctgattggt
     4201 caggattttt gccggcaggc aggcatgacg ctgctgccgg attactcggt tttggacttg
     4261 ttcggctgca aaaccctcat ctgccacggc gacactctgt gtacggatga cagggcatac
     4321 caacgtttcc gcaaaatcgt gcatcggaag cggctgcaaa aactgttcct gatgctgccc
     4381 ctgaagtggc gcacgcgcct tgccgccaaa atcaggcgcg tcagcaaaat ggaaaaacag
     4441 gtcaagcccg ccgatattat ggatgtcaat gccgccttta ccgcgcggca ggttcgcgcc
     4501 tttaacgcgg aaaggctgat acacggacac acccaccgcg agcatatcca tcacgaaaac
     4561 ggctttaccc gcatcgtttt gggcgactgg cataacgact atgcttcaat cctccgcgtg
     4621 gacggggacg gcgcggtatt cgtgccgctg gaaaatgctg aaaatgccgt ctgaagcctt
     4681 tcgggcggct ttttttacac gcccctttcc cacactccct ccgccgcatc atcaccatcc
     4741 ttaacccgca ttaatagcca ttatcgataa aatgcttgac cgattacata agattacgta
     4801 aagtgtgcaa acgcataaca attggtctta ccaatttatc ttttaaccaa aatatcgggt
     4861 gtacgggatt tgaacgtctt tccaaacctc gacgcgcctt atgatgcaaa tgcctaaaaa
     4921 ggattcgtta tggcactttt cctcagcata ttccccatcg tcctgctgat ttggctgatg
     4981 gtgaaaaaaa acagtatgcc ctcctacgtc gcgctgccga ttaccgcagt gctgatttac
     5041 gccatcaaac ttttctactt cgacgatgcg ggaatgctgc tcaacgccac cgccgcttcc
     5101 ggcctcgtca aaacgctcac gccgattacc gtgattttcg gcgcgattat gttcaaccgt
     5161 atgatggaaa ccacgggctg catcgatgtc atccgcaaat ggctggcgac catcagcccc
     5221 aaccccgtag cgcaactgat gattatcggc tgggcttttg cctttatgat tgaaggcgca
     5281 tccggcttcg gcacgcctgc cgcgattgcc gcgccgattc tgatgagctt gggcttcaac
     5341 ccgttgaaag tggcgatttt cactttggtg atgaactccg tccccgtctc tttcggtgcg
     5401 gtcggtacgc cgacctggtt cggtttcgca ccgctgaacc tgagtgccga agacatcctc
     5461 gccatcggca ggcagaccgg cgtaatgcac ttcttcgcag gtttcgtcat ccccgtcatc
     5521 ggcttgggct tcatcgtacc ttggtctgaa atccgcaaaa acttgggctt cgtcgccatt
     5581 gccgtcttct cctgcaccat tccttatgtc gcattggcga tggtcaacga agaattcccg
     5641 tcgctcgtcg ccggcgcgat cggcctgatg gtgtccgtat tcgccgccaa ccaaggctgg
     5701 ggcttgagca aagaccacgc caaagacccg aatgccgaaa aagtgccgtt cgcccaagtc
     5761 gccaaagcac tcgccccttt gggtatgctg atcggcatgc tggtggttac gcgcatcaaa
     5821 cagctcggca tcaaaggcat tttgaccagc aaagaagaat ggttcagctt ccaactgccg
     5881 tttgatttgt ccaaaatcac cgtcagcgac tccctgacga ttaccttcgg caatattttc
     5941 ggacaagatg tcagcgcgtc ttaccaaacg ctgtacgtcc cggcttggat tccgtttgtg
     6001 ctgaccgttt ggatttgcat cctgctgtat aaaaccaaat tcaaagatgc ctggacgatt
     6061 tattccgtaa ctttcaatca aaccaaaaaa ccgctgcttg ccctgatggg cgcgctgatt
     6121 atggttcagc tgatgctggt cggcggcgac aattcgatgg tgaaaatcat cggtaaggaa
     6181 tttgccgcaa tggcgggcga acactgggtt tatttctcgc cgtatctggg cgcgatcggt
     6241 gcgttcttct ccggctccaa caccgtgtcc aacctgacct tcggaccgat tcagcagcaa
     6301 atcgccttgg ataccggcct gtccgttacc ctgattctgg cgttgcagtc cgtcggcggc
     6361 gcgatgggca atatggtgtg cctcaacaac atcatcgccg tatgtaccgt attggatgtg
     6421 aaaaattccg aaggtgcgat tatcaagaaa accgttatcc cgatggcgat ttacggcgtg
     6481 attgccgtcg tcgcggcaat gattttcttc ctctaggcga aacgccacca tccatagcgg
     6541 cagcacgcgg ggaacggaaa ccgccgttcc ccgtccgggc ggcgcatcgg gcagaatctc
     6601 ggtgccggaa cagcccgccc cgccaaacaa atgccgtctg aaaccggaaa aggcttcaga
     6661 cggcattttt ccgccgcttg cgttcaggcg taatgatgat gcggcatctt gccgtcaagg
     6721 cggtagcgcg tgccgcaata cgggcaggca acgctgcccg attctccttc gcacaaaggc
     6781 aaaaacactc tcggatgccc gttccactgc tcgttgtcgg gtcccgagca atacagcggc
     6841 agattttccg gcaacacgga aatttcctgc agattcagat tgtccatttg attttccttt
     6901 gcgtggttgg cgtgcgccca ttttacgcca tcggcaggct aaaggatatt ttcggcgcaa
     6961 agccgcaatc cgctataatc cccacttttc agacggcata ccatgactgc gcttaccctt
     7021 ccggaagaca tccgccaaca agagccatcc gccctgctct ataccctcgt ttccgcctac
     7081 ctcgaacaca ccgcccaaac cggcgacgaa tccctctcct gcctgtccga cgaccagcac
     7141 acgctgaccg cattctgcta cctcgacagc caagtcgaag aaggcggctt cgtgcaactc
     7201 atcgcctccg gttacggcga atatattttc cgcaacccgc ttgccgacag cctgcgccgc
     7261 tggaaaatca aagccgtgcc gaaagtcttg gacaaagcca aagccctcta cgaacaacac
     7321 ggcaaaacca tcgaaacgct cgccgacgga ggcgcagaca tcgaatccct gcgcaaacag
     7381 ttccccgact ttgaagaatg ggacggcgca tactacgaag ccgccgaaca agacctgccc
     7441 ctgcttgcag aacacataca gtcaaactgg gaaaccttcg cccatatcgg gcaggcgtga
     7501 ttgcgtctgt ttccagcccg tgtaaaacag cgtaaaatcg gcaaacccga atgaccttcc
     7561 gtccccatca aggagcaagc tatgttcttc aagcacatcg aagccgcccc cgccgatccg
     7621 attctcggtt tgggcgaagc gttcaaagcc gaaacccgcc ccgaaaaagt caacctcggc
     7681 atcggcgttt ataaagacgc atccggcgcg acacccctcg tcaaagccgt caaagaagcc
     7741 gaaaaacgcc tgttggaaag cgaaaccacc aaaaactacc tcaccatcga cggcgttgcc
     7801 gactacaacg cgcaaaccca aatcctgctg ttcggcaaag accacgaaat catcgccagc
     7861 cgtcgcgcca aaacagcgca aagcctcggc ggtacgggcg cattgcgtat tgcggccgag
     7921 tttgccaaac gccagttgaa cgcgcaaacc atctggattt ccaatccgac ttggcccaac
     7981 cacaacgcca tcgccaaagc ggtcggtatc caagacaaac cttatcgtta ctatgatgcc
     8041 gccaaacacg gtttggattg ggacggcatg attgaggact tgagccaagc gcaaaaaggc
     8101 gacatcgtcc tgctgcacgg ctgctgccac aatcctaccg gcatcgaccc tacgcccgaa
     8161 caatgggaaa ctttggcaaa actttctgcc gaaaaaggct ggctgccgct gtttgacttt
     8221 gcctaccaag gcttcggcaa cggtttggaa gaagatgcct acggcttgcg cgtgttcttg
     8281 aaacacaata cagaattgct gattgccagc tcttattcca aaaacttcgg tatgtacaac
     8341 gagcgcgtcg gcgcgttcac tttggtggcc gaagacgaag aaacagcaat ccgcgcacac
     8401 agccaagtca aaaccatcat ccgtaccttg tattccaacc cggcttcaca cggtgcgaac
     8461 accattgcgc tggtgttgaa aaatgatgat ttgaaagccc aatggattgc cgaactcgat
     8521 gaaatgcgcg gccgcatcaa agccatgcgc caaaaatttg ttgcgttgct caaagccaaa
     8581 ggtgcaagcc aagactttga tttcattatc gaacaaaacg gtatgttctc tttcagcggt
     8641 ctgactcccg aacaagttga ccgtttgaaa aacgagtttg ccatttatgc cgtccgctcc
     8701 ggccgcatca acgttgccgg cattaccgac gacaacatcg attatctgtg cgaaagcatc
     8761 gtgaaagtac tgtaaaaagc acagccatat gaaaatgccg tctgaacctt aaccagttca
     8821 gacggcatct gttttttgtt aaaaaacaat aaaccataac aatttcaaac aagctaaaaa
     8881 catctataaa atcaacccaa tatgatgaac tcaaataaaa aatacgaata tcatcattct
     8941 caaattcaaa atttgaacgc cacagtatta tccgaagcca caaaaacctt tccgccgtca
     9001 ttcccgcgca ggcgggaatc cgggaaccca atgctgcaag aattgattag aaacaactga
     9061 aaccgagcaa actggattcc cgcctgtgcg ggaatgacga aataaggcga gtaaaactga
     9121 tgaaacaaat tgattaaaaa caataactta tattatttta tttaaatttt cgataaaatc
     9181 aattttccgt attcaatact gctccaatca attcccgcgc accgtcgtcc gccaatttct
     9241 tagcgacagc gcgtccgagc gcgtcggcat attcggcagg ggcttgcgcg tccgcccgca
     9301 acacaaccga accgtcgggg tgtccgacca agccgcgcaa ggtcagcaag ccgttttctt
     9361 ccgtgcaata tgcggccaaa ggcacttggc agcttccgcc caaagcgcgt gcgagggcgc
     9421 gttcggcggt aacacaggca ttggtaacgc cgtggttcaa gggtttcaaa acttcataca
     9481 aatcttcgcg gtgcgcggca atttcgatac ccaatgcgcc ttgtccggcg gcaggcaggc
     9541 tgtcggattc cgacaaaatc atgcggatgc gtccgtccaa tttcagacgc tgcaaaccgg
     9601 cggcagccaa gataattgcg tcgtattcgc cgttatcgag tttggacaaa cgggtttgca
     9661 cattgccgcg caaaggttta ataaccaaat gcggatagcg cgcacgcaac tgggcttcgc
     9721 ggcgcaggct ggatgtgccg acaaccgcgc cttcgggcat ttcttccaaa cgcgtgtatt
     9781 ggttggacac aaatgcgtca aacggattgg cgcgttcgcc gatggccgca agcgcgaaac
     9841 cttcaggcaa atccatcggt acgtctttaa tcgaatgcac cgccaaatcg gcgcgcccgt
     9901 catataaagc ctgttccaac tctttgacaa acaagccttt accgccgact tttgacaaag
     9961 ttttgtccaa aatctgatcg ccgcgcgtgg tcatgcccaa aatctcgact tcgcaatcgg
    10021 gatacagagc cttcagacgg ccttggatat gctttgcctg ccacatagca agcaggcttt
    10081 cgcggctggc gatgacgagt tttttcgggt tcatgttcaa tgcgttcaaa gaatggaaac
    10141 ggcgtaaagt ctatcatatt ttgaacgttt cttcagacgg tatgccgtgg tctatgttat
    10201 atttacaccc acaaaacacg aaacccgcca caatgaaacg caccaaaaaa taccctttct
    10261 taacgttgca gcggcaacgt ttccatttga actttgaaaa cgcctcttcc gccgccaacc
    10321 ttccaagcga acacgatttt taccgctggg cgtggtctgc cctgaaaagc ggataccgcc
    10381 gcgcagacat cagcctgatt cttctggacg aagaagcagc ccgcgcctac aaccgcgact
    10441 accggggcaa agactacgcc accaatgtct tgagtttcgc gctcaacgaa ggcgaaaccc
    10501 tgccctgcca agtttcggaa aaactgtacg gcgatttgat tatctgcccg caagtcgttt
    10561 tgaaagaagc cgccgaacaa ggcaaaacgc ccgaacggca ttttgcccac ctgaccatac
    10621 acggtgtttt gcacctgatg ggctacgacc acatcgaaga cgatgaagcc gaaataatgg
    10681 aagccgaaga aatccgcctg atgcgggcgg caggctatcc caacccctac cgagaggacg
    10741 gacattaaaa tggacggcgc acaaccgaaa acaaattttt ttgaacgcct gattgcccga
    10801 ctcgcccgcg aacccgattc cgccgaagac gtattaaacc tgcttcggca ggcgcacgag
    10861 caggaagtat ttgatgcgga tacgctttta aggttggaaa aagtcctcga tttttccgat
    10921 ttggaagtgc gcgacgcgat gattacgcgc agccgtatga acgttttaaa agaaaacgac
    10981 agcatcgagc gcatcaccgc ctacgttatc gataccgccc attcgcgctt ccccgtcatc
    11041 ggcgaagaca aagacgaagt tttgggcatt ttgcacgcca aagacctgct caaatatatg
    11101 tttaaccccg agcagttcca cctcaaatcc attctccgcc ccgccgtctt cgtccccgaa
    11161 ggcaaatcgc tgaccgccct tttaaaagag ttccgcgaac agcgcaacca tatggcgatt
    11221 gtcatcgacg aatacggcgg cacatccggc ttggtcacct ttgaagacat catcgagcaa
    11281 atcgtcggcg aaatcgaaga cgagtttgac gaagacgata gcgccgacaa tatccatgcc
    11341 gtttcttccg aacgctggcg catccatgca gctaccgaaa tcgaagacat caacaccttc
    11401 ttcggcacgg aatacagcag cgaagaagcc gataccatcg gcggcttggt cattcaagag
    11461 ttgggacacc tgcccgtacg cggcgaaaaa gtccttatcg gcggtttgca gttcaccgtc
    11521 gcccgcgccg acaaccgccg cctgcacacg ctgatggcga cccgcgtgaa gtaagcactg
    11581 ccgtttctgc acagtttagg atgacggtac gggcgttttc tgtttcaatc cgccccatcc
    11641 gccaaacata aaaatgccgt ctgaaaccgt tgcaagtttc agacggcatt tcgcttatcc
    11701 gcttattttt tgctcaaagt cagccccgtc caaccgaata acagggtcaa agccaaactc
    11761 aaatagcaga aaaaggcata cggcagatat tcccaaaccg gcacgcccag cgcgtggctg
    11821 atgaacacgc cgcatacgct ccacggtacg agcgggttaa tcaccgtccc cgcatcttcc
    11881 agcgtccgcg acagattgcg ggaatgtagt ccgagcctgt cgtaaacggg tttaaacgtt
    11941 tctccagaaa gcaggatgct caaatattgt tcgccaatca ggaaattaac cccgaccgaa
    12001 gtcatggcaa cgctgaacgt cgcgcgtccg gcattcgtca agaaggtacg gatggcctcc
    12061 aacagggaag gaatcacacc gagcgcaaac aacagtccgc ccaaactcat cccgagaatc
    12121 acgatggttt gcgtgaaaaa catactttcc aaaccgccgc gcgaaatcag tttgacaaca
    12181 tctttaaacg cttcgccttc gagtttgtag ccgccgtaaa accacgcacc gagctgacgc
    12241 agatcgggcg tgctgtgcag atacgttaca gcaacggcaa ccatgacggt aaagagcatg
    12301 gcgacgacgg cgttgatgcg catcaatgcc aaaacgacca acagcgcaaa cggaatcagc
    12361 gaatagcagt gcaccaatcc cgtggcttca agctggctgc ggaaggattc gacgctgttc
    12421 aaatcctgcg cggcgacgct gggaagaagc cacagcatca gtgccgcact gatgagccac
    12481 gcgggaatgg tggtgtacat catatttttg atgtgttcaa acaggtcgat accgacaatg
    12541 gacgcggaaa tgcccgtcgt atcggaaagc ggggacattt tgtcgccaaa aaatgcgccc
    12601 gaaacaatcg cgcccgccgt catcgccata tcggcctgaa acgccgccgc catacccata
    12661 aaggcaacgc cgacagtggc gcaggtggtc aggctgctgc cgatggacac gccgatgacg
    12721 gaacacagcg cgaaggcgga aaaataaaaa taagtcgggg aaatcagtcc aaaaccgtaa
    12781 tacatcagcg tcggaatcgc gccgctcatc atcagcgcgc tgaccatcag cccgatgaag
    12841 aaaaacaggt aaatcgcgcc cataccctga ttcaacgcgc ctatcatgcc ctgctgcata
    12901 tcgttgtatt tcaaaccgcg cgccaagccg tacaaaatca gcacgacgat ggcggcaata
    12961 atggacatat gcggcagcca ctccaatgaa atgatggtat agcccatcgc ggcaatcaga
    13021 gcgacgacga cggcaagtgc ctcaccgcgc ggcatatcga gtaaggattt gaaagcgaac
    13081 atgattcttt gcccgatttg atataaagtt aacggattct aacacaccat accgaatccg
    13141 cccgacgttt tcagacggca ttttagcgtt ttacaaaagc cggacagaaa caaaacggca
    13201 attttctcaa tttaaattaa tttttttgaa atataatttt ttattttttt gtttgttgac
    13261 atataagact tttatggatt gaagtattaa aacctcggca cacacgccgc aaacaccggt
    13321 acgcaaaaat gccgtctgaa agatgttcag acgacatttc tcaagaaaaa gattatttgt
    13381 ccgccctata tccgtacacc gcaaaaaaca cgatatacag ataacagatg acggaaacga
    13441 caaacgaaga catcagggtg taagtatctg ccacccagcc ctgcacgaca ggaacgaccg
    13501 caccgccgac aatcgcggta cacagtacac cggaagccgc gttggtaaat tttcccaatc
    13561 ctttggttgc caaagagaaa atcgtcggga acataatcga gttgaaaaaa ccgatggcaa
    13621 gcagcgacca catcgccaca tccgcattgc cgctacccgt cgccatcgcg acggcaagca
    13681 gtacgaccgc agccgatgcg ttaaacgcca aataacggtt gggcgcgaat ttcgccatca
    13741 ccgccgaacc gaggaaacgt ccgaccatcg cgccgcccca atagaacgac aggtaatgcg
    13801 cggcagaagc atgatccagc cctttcagat aacccaatac gttgaccatc aacgaaccga
    13861 tagacacctc cgcgccgaca tagcagaaaa tgcctgccgt accgaacacg agatgtttgt
    13921 attgccatac gctggttttg ccgtcgtggt tgtgcgcgct ttcctcggcg gcaattttgc
    13981 gcgcgtcggg cagccggatc attttcacga aaacggcaag gataatcagc agccccgcca
    14041 gtcccaaata gggaatctgt acggaagaaa tctgttccgc cttgctgacg gtttgggttg
    14101 cgtccgccag aatcaggaac gcgccgattt gcggcgcaat ggtcgtaccc aaagcgttaa
    14161 acgcctgaac cagcgtcagt gttgccgatt ccttgccggg tttcgccagc agggtaacat
    14221 aaggattacc ggcgacctga agcagcgtta cgccggaagc caaaataaac aacgcgccca
    14281 aaaataccgc gtaagaatgg ctacccgcag caggataaaa cagcaggcat ccgaccgccg
    14341 tcagcagaaa gccgccgata acgccgtttt tgtagccgac tttgccgaca aaagccccca
    14401 tcgggatgga catcaccgca taggcggtaa agaaacagaa ttggatcagc atcgcctgaa
    14461 cgtaagacag gtcgaaaatt tctttcaaat gagggataag gatgtcgttc atgcaggtaa
    14521 taaaacccat catgaagaac agcgtggtca agacgaccaa tggggacgta tgattgtttt
    14581 gtgattgcgc agacatgatt tgcctttcgt ggtgtcggaa tattacccgt ttcaagaaaa
    14641 tagaaattga catttcttaa cggcaatgca aatcatactg atatttgaac attttgcaaa
    14701 ctttatcgga tgcaggcaat gcgccgatct gaaattcaag cagcagaaat taatatttta
    14761 cagttgcttg catagatttt aatagatttt aaaaaattcc ggcggacttg caaaaaccgt
    14821 tcccaataaa atgaaaatcc gccgccgtat ccggaaaatt cggaaatgcc gcatcgtggc
    14881 atcaaaaccg gagcggaaag aatgtcgtat gcccgacaaa aaaggggcat acggctgtgc
    14941 cgtatttttt gcaccgtcct ccgcccttcg gcgggggcgt gaaaatatag tggattaaca
    15001 aaaatcagga caaggcgacg gagccgcaga cagtacagat agtacggaac cgattcactc
    15061 ggtgcttcag caccttagag aatcgttctc tttgagctaa ggcgaggcaa cgccgtactg
    15121 gtttttgtta atccactata ccgtacaatc cgtcgccgat ttttgcctgt ttgagactgt
    15181 ttgcaatgat gcccgcctac gcctacgccg cgctcgcttt ttccgccttc acttccgcca
    15241 ccctcctgcc cggcacatcc gaagccgcct ttgccctgtt cgtccaccgc tttcccgaac
    15301 acgcatacgg cgcgttgctg tgcgccggcc ttgccaacgg attgggcagt atggtttcct
    15361 attggatggg gcgtttgctg ccctcccgaa aaatgccgtc tgaaaaaaca ctgaatctga
    15421 tgcggcgttt cggtatttgg ctgcttgcgt ttgcctggct gcccgtcgtc ggcgacgcac
    15481 tgccgcttgc cgccggctgg ctgcggttga atccgtggac aagcgggctg atgctggtta
    15541 tcggcaaaac ggcgcgttac gccttcattc tgtggggaat gcaatattac gccgcctgaa
    15601 ccatacgtta taatgccgaa cacacaaacc caccgtataa aaaaatgaac agacacatcc
    15661 gccaagaaat cttcgaacgc ttccgcgccg ccaaccccca tccgaccaca gaactcaact
    15721 tcaactcccc tttcgagctt ttaatcgccg ttttactgtc ggcacaggca accgacgtcg
    15781 gcgtaaacaa agcgacggcg aagctgtttc cggttgccga tacgccgcag gcgatgctgg
    15841 atttgggttt ggacggcgtg atggaataca cgaaaaccat cgggctgtat aaaaccaagt
    15901 ccaagcacat catgcaaacc tgccgcatcc tgctggaaaa atacaatggc gaagtgccgg
    15961 aagaccgcga ggctttggaa tcgttgccgg gcgtggggcg caaaacggca aacgtggtat
    16021 tgaacacagc gttcggacac cccgttatgg cggtcgatac gcatattttc cgcgtgtcca
    16081 accgaaccaa aatcgccccc gggaaagatg tgcgcgaagt cgaagacaaa ctgatgcgct
    16141 tcattcctaa agaatttctg atggacgcgc accactggct gattttgcac ggacgctaca
    16201 cctgcaaggc actcaaaccg caatgccaaa cctgcatcat caacgatttg tgcgaatatc
    16261 ccgccaaagc ctgaccgccg ccgcccttca aaatgaaacg cttgaaaatt cggacggacg
    16321 ttgtagaatt tcaacctatg ccgtctgaag ccgacaaaat gcgcttcaga cggcattaaa
    16381 gccggtaccg gcatccgaca aaggacaaaa cgtgttcaaa aaataccaat acctcgcttt
    16441 ggcagcactg tgtgccgcct cgctggcagg ctgcgacaaa gccggcagct ttttcggtgc
    16501 ggacaaaaaa gaagcatcct tcgtagaacg catcaaacac accaaagacg acggcagcgt
    16561 cagtatgctg ctgcccgact ttgtccaact ggttcaaagc gaaggcccgg cagtcgtcaa
    16621 tattcaggca gcccccgccc cgcgcaccca aaacggcagc agcaatgccg aaaacgattc
    16681 cgacccgctt gccgacagcg acccgttcta cgaatttttc aaacgcctcg tcccgaacat
    16741 gcccgaaatc ccccaagaag aagcagatga cggcggattg aacttcggtt cgggcttcat
    16801 catcagcaaa gacggctata ttctgaccaa tacgcacgtc gttaccggca tgggcagtat
    16861 caaagtcctg ctcaacgaca agcgcgaata taccgccaaa ctcatcggtt cggatgtcca
    16921 atccgatgtc gcccttctga aaatcgacgc aacggaagag ctgcccgtcg tcaaaatcgg
    16981 caatcccaaa gatttgaaac cgggcgaatg ggtcgccgcc atcggcgcgc ccttcggctt
    17041 cgacaacagc gtgaccgccg gcatcgtgtc cgccaaaggc agaagcctgc ccaacgaaag
    17101 ctacacaccc ttcatccaaa ccgacgttgc catcaatccg ggcaactccg gcggcccgct
    17161 gttcaactta aaaggacagg tcgtcggcat caactcgcaa atatacagcc gcagcggcgg
    17221 attcatgggc atttccttcg ccatcccgat tgacgttgcc atgaatgtcg ccgaacagct
    17281 gaaaaacacc ggcaaagtcc aacgcggaca actgggcgtg attattcaag aagtatccta
    17341 cggtttggca caatcgttcg gtttggacaa agccggcggc gcactgattg ccaaaatcct
    17401 gcccggcagc cccgcagaac gtgccggcct gcgggcgggc gacatcgtcc tcagcctcga
    17461 cggcggagaa atacgttctt ccggcgacct tcccgttatg gtcggcgcca ttacgccggg
    17521 aaaagaagtc agcctcggcg tatggcgcaa aggcgaagaa atcacaatca aagtcaagct
    17581 gggcaacgcc gccgagcata tcggcgcatc atccaaaaca gatgaagccc cctacaccga
    17641 acagcaatcc ggtacgttct cggtcgaatc cgcaggcatt acccttcaga cacataccga
    17701 cagcagcggc ggacacctcg tcgtcgtacg ggtttccgac gcggcagaac gcgcaggctt
    17761 gaggcgcggc gacgaaattc ttgccgtcgg gcaagtcccc gtcaatgacg aagccggttt
    17821 ccgcaaagct atggacaagg caggcaaaaa cgtccccctg ctggtcatgc gccgtggcaa
    17881 cacgctgttt atcgcattaa acctgcaata acccacataa tttaaccaaa atatttttta
    17941 aatgataaaa tgcccgtcaa taccgattaa cgggcatttt acaaaaatca gttggttgat
    18001 tttaaacaaa tattttttac gacaaaaaat atttccgccc attttgccaa caaaacccaa
    18061 accggaggcg gacagatacg ctcccatccg gacgcttaat acccccataa ccatgcagct
    18121 gatcgactat tcacattcat ttttctcggt tgtgccaccc tttttggcac tggcacttgc
    18181 cgtcattacc cgccgcgtac tgctgtcttt aggcatcggt attctggtcg gcgttgcctt
    18241 tttggtcggc ggcaaccccg tcgacggtct gacacacctg aaagacatgg tcgtcggctt
    18301 ggcttggtca gacggcgatt ggtcgctggg caaaccaaaa atcttggttt tcctgatact
    18361 tttgggtatt tttacttccc tgctgaccta ctccggcagc aatcaggcgt ttgccgactg
    18421 ggcaaaacgg cacattaaaa accggcgcgg cgcgaaaatg ctgaccgcct gcctcgtgtt
    18481 tgtaaccttt atcgacgact atttccacag tctcgccgtc ggtgcgattg cccgccccgt
    18541 taccgacaag tttaaagttt cccgcgccaa actcgcctac atcctcgact ccactgccgc
    18601 gcctatgtgc gtgctgatgc ccgtttcaag ctggggcgcg tcgattatcg ccacgcttgc
    18661 cggactgctc gttacctaca aaatcaccga atacacgccg atggggacgt ttgtcgccat
    18721 gagcctgatg aactattacg cactgtttgc cctgattatg gtgttcgtcg tcgcatggtt
    18781 ttccttcgac atcggctcga tggcacgttt cgaacaagcc gcgttgaacg aagcccacga
    18841 tgaaactacc gtttcagacg ctaccaaagg tcgtgtttac gcactgatta ttcccgtttt
    18901 ggccttaatc gcctcaacgg tttccgccat gatctacacc ggcgcgcagg caagcgaaac
    18961 cttcagcatt ttgggggcat ttgaaaatac cgacgtaaac acttcgctgg tattcggcgg
    19021 cacttgcggc gtccttgccg tcgttctctg cacgctcggc acgattaaaa ccgccgacta
    19081 tcccaaagcc gtttggcagg gtgcgaaatc tatgttcggc gcaatcgcca ttttaatcct
    19141 cgcttggctc atcagtacgg ttgtcggcga aatgcacacc ggcgattacc tctccacgct
    19201 ggttgcgggc aacatccatc ccggcttcct gcccgtcatc ctcttcctgc tcgccagcgt
    19261 gatggcgttt gccacaggca caagctgggg gacgttcggc attatgctgc cgattgccgc
    19321 cgccatggcg gtcaaagtcg aacccgcgct gattatcccg tgtatgtccg cagtaatggc
    19381 gggggcggta tgcggcgacc actgctcgcc catttccgac acgaccatcc tgtcgtccac
    19441 cggagcgcgc tgcaaccaca tcgaccacgt tacctcgcaa ctgccttacg ccttaaccgt
    19501 tgccgccgcc gccgcatcgg gctacctcgc attgggtctg acaaaatccg cgctgttggg
    19561 ttttggcacg acaggcattg tattggcggt gctgattttt ctgttgaaag ataaaaaacg
    19621 cgccaacgcc tgaccccttt ccctgttcag acggcatatg ccgtctgaag ctttttggag
    19681 caaaccgcaa tgaccgtccc ccatattccg cgcggccccg tcatggcaga cattgccgcc
    19741 ttccgcctga ccggagaaga aaaacaacgc ctgctcgatc ccgccgtagg cggcatcatc
    19801 ctcttccgcc gcaacttcca aaacatcgaa cagctcaaaa cactcaccgc cgaaatcaaa
    19861 gccctccgca cacccgaact catcatcgcc gtcgatcacg agggcggaag ggtgcaacgt
    19921 ttcatcgaag gcttcacccg cctgcccgca atgagtacgc tcggcgagat ttgggacaaa
    19981 gacggcgcgt ccgccgccga aaccgccgcc ggacaagtcg gccgggtttt ggcaaccgag
    20041 ctttccgcct gcggcatcga cttgtccttc acgcccgtct tagatttgga ctggggaaac
    20101 tgccccgtca tcggcaaccg cagtttccac agtaaccccg aagccgtaac ccgcctcgcc
    20161 ctcgcccttc aaaaaggttt ggcaaaaggc ggtatgaaat cctgcggcaa acattttccc
    20221 ggacacgggt ttgtcgaagg ggacagccat ttggtgctac ccgaagacgg gcgcagcctc
    20281 gacgaactcg aagccgccga cctcattcct ttccgcatta tgagccgcga aggtatggcg
    20341 gcggttatgc ccgcccacgt cgtttatcca caagtggaca caaagcccgc cgggttttcc
    20401 gaaatctggc tgaaacagat tttgcgccgc gacatcgggt tcaaaggcgt gattttctcg
    20461 gacgatttga ctatggaggg cgcgtgcggg gcaggcggca tcaaagaacg cgcccgcatt
    20521 tcctttgagg caggttgcga cattgtcctc gtctgcaacc gtcccgacct tgtggacgaa
    20581 ctgcgcgatg atttccgcat tcccgacaat cccgctttgg cgcaacgttg gcaatacatg
    20641 gccaacacgc tcggcagcgc cgccgcgcaa gccgttatgc agacggcgga tttccaagcg
    20701 gcgcaagcct ttgttgccgc ccttgcctcg ccgcaggata cagcgggcgg cgtaaaagtc
    20761 ggcgaagcct tttaaatccg cccgacacgc ggcaaaaagg caaaacggta taggcacgcc
    20821 gtattttttg cgctataatc acgccttact taattcggaa tgtagcgcag cccggtagcg
    20881 cacttcgttc gggacgaagg ggtcggaggt tcgaatcctc tcattccgac caaatccaaa
    20941 ccgcctcggc atccattgcc ggagcggttt ttccttttgg cgtcaacaga aaaatgccgt
    21001 ctgaaacagc attctgtttc agacggcatt tcgttttccc taacccttct atttgcgtgc
    21061 actgacaaag ggtatcggca aggttcaaaa gaccatcgga atttaggaag ccgggcttgt
    21121 acccaacggc agcatcttat tcagtaaggc tccgtcctga ttgggcggtg gaaataccgg
    21181 catttccacg cagaagcggc acactttccc cgtatgtcaa acatcggtaa aacggtacgc
    21241 cggccctttg agttacactg cttaaactac tctattcccg cccatttgtg cgtctgcacg
    21301 ctcaactgcc aatgcacgga tgcgtcgggg cgactgttta aaataccgat ttggcggatg
    21361 gtgtcgtaga tgttcatcgc accgtcttgc tcacagggcg aaaggtagta atgatgtgcg
    21421 cggattttgc gttccatgtt ttcgcagaac gcaaggacat caccatcggc aacaatccgc
    21481 acttcgtcgg ctgtttcgat acagctattt tcatatttgg cggcgtagca ggctttgggg
    21541 ctggtggcga cgtagtcgat ttgcggcggc gcgggattga gtccgttggt ttcgagacag
    21601 aggaaatagc cttccgcctt gagcgtgtcc agcagcatat cgagatgcgg ctgtatggtc
    21661 ggttcgccgc cggtgatgat gatgttgcgg gcggcatagg ttttcagaca gcctaagatg
    21721 tcggacaggc tcatcatgcc gaatgtcaaa taatcggtat cacaccagcc gcaggcgagg
    21781 ttgcatttgc ccaagcggac gaaaacggcg ggcatgcccg tgttccagcc ttcgccttgc
    21841 aggctttcaa agatttcgac gatgcggtat tggggatttt cgggggcaac attgattttt
    21901 ttcataccgc caacaccgcc gccgctgcca aaaatgcggg caaaccttgt ttgacgagta
    21961 tgcctttgtt gccggaagag aacgcgcccc acgcggcggc aatcaggacg aagccgagaa
    22021 acagtaccgt cacgccgtac accgcgttat ccggcgcagc aaaccgcgac cacaccagcc
    22081 cgatgccgag aaagccgtta tacagccctt ggttgccgaa cagggtctgc acgcgatttt
    22141 gttccataaa ttcataaggc agcttgaacg tttccgccgc tttttcgctg ggaatctgtg
    22201 tcatttcaag ccaggcgatg tagaaatgtt cgacggcgac gaagaggact aggaggatga
    22261 agaggagttt catgggtaag caccttaatt tgcactaaga tttatattta acaaacttta
    22321 ccaattttat ttaacaaaaa agccacccat tatggatggc ttctctacca aaacttttca
    22381 tgctactttt ttcatggttg cagcttttgc tttataagct cgtttttcaa tttgtctttg
    22441 aatagctgca agttgcttcg ttaatgcagc aatgcgagcg aaacggatat ccattgattt
    22501 cataaataac tccttgctgt tgttaataaa ggctcgactg attatttttg agcatagaac
    22561 gattccgaga acattcctca gtatctttat ttctaacgtt agtaatcata gattgtgcgt
    22621 agagaagtcc ttgagccaaa ctaatttttt tgttttccaa agaaaaatca ttgggactga
    22681 tcggaagttt atcaacctct tgttgtaaat ttttcacaat ggattccaaa gtatccaaat
    22741 caggatcaac taaatcatgc ataccatcaa tcccaaaatc atcgtacagt ttcaaaagaa
    22801 attgtacgaa cttattaatt acatctatgc tctcggcaat aatgccttcc tcttgaatca
    22861 tactactagt tgtattcatg gttattatgc ctgaaatttt ctattacggt cgatttttta
    22921 gaaagtatgg aattttacaa ttgattatat gacaagtcaa aacaaatctt taaaatttgt
    22981 ttcaatatta ctccccttca tactccgcac acgatgtcgg cgtttcccac aatttgacgc
    23041 ggcacacgtt cagccccgcg tttttcagac ggtcgtacat ttcgaccgcc atattttcgg
    23101 cagtggtgcg gcagggcagg cgcagggttt tcatgttcca gccctccaaa agcgcggcga
    23161 tttggcattc gcggctgttg ccgccgtggt agatgaaggc gtggtcgaag gggtcggtaa
    23221 tgtgttgttt gacaatggct ttcaagtcgg taaagtccat caccataccg tctttcgcgc
    23281 cgcctttgat aatgccgtct gaaacggtga tttcgagttt gtaggtatgt ccgtgcaggt
    23341 tttggcattt gccgtcatgc ccgtcgagca tatgcgagga gtcgaaggtg aagattttgg
    23401 tgattttcat gggttctcaa atgggcaaat agccttgaaa gccgatttcg gcgggtttgc
    23461 cgtgcggatt cggggtcagg cggatatgga aattgccgat gcggtcgagc gcaagcaggt
    23521 tgtccacgtc ttttaagttg tctttatgtt gctgaacata gctgtcggtc aacagggttt
    23581 gcagggcttt ttgtttggct tcggcaggcg tggcggcggc gaacagccca aaagcgtgcg
    23641 cttcggcgag ctgccctgcg cgataaccgc cgacattggc gaaatacagg cgcggggcgt
    23701 gttcagacgg cattttcgtt ttgggcgttt cggatacggc gatgtcgtaa ccgtccgccc
    23761 attcgacaac ctgccagccg tcgatgtgga ttttgtccgc atcgccgaac cacgcggctt
    23821 tgagtgcggg gacggcttca cggtagtcgt cgcacacggc aaattggatg tcgtgcactt
    23881 cgatattcga cctgccggca ttgccgccga ggtaaaacat atggagcttg ggcatatcgt
    23941 attccttatg gtttgcgcgt gttcagacgg cctttttact ttccagatat tccgccagcc
    24001 cgcgttcgcg caagatacag ctcgggcatt cgcggcagcc gccgacgatg ccgttatagc
    24061 aggtgtgggt ttgctcgcgg atatagtcca gcgcgcccat ttcgtccgcc aacgcccaag
    24121 tttgcgcctt ggtcagatac atcagcggcg tgtggatttg gaaatcatag tccatcgcca
    24181 gattaagggt aacgttcatg gatttgacga acacgtcgcg gcagtcagga tagccggaga
    24241 agtcggtttc gcacacgccc gcgatgatgt gccgtatccc ctgccctttg gcgtaaatcg
    24301 cggcatagag caggaaaagc gcgttgcggc cgtctacaaa ggtattcgga acgccgtttt
    24361 cggcagtttc gatggcggcg gtgtcgtcca tcagggcatt gtgcgtaatc tgccgcatca
    24421 ggctcaagtc gagtacggtt tgtttgacgc ccaaatcctg cgcaatccag ctggcacgtt
    24481 ccagctcgac ggcatggcgt tgcccgtatt ggaaagtaat ggcttggacg ttttcgcgcc
    24541 cgtagatttg gattgcctga atcaggcagg tggtcgaatc ctgaccgccc gaaaagatga
    24601 ccaaggcttt ttggtttgac atatcgaatc ctagttttgg taacgcggga ggtttgcgaa
    24661 ccgcgaagtt ggacagtaaa gacgcggatt atacaggcaa acgcgttcag acggcatctg
    24721 aacgccatgc cgtctgaaca cgcggcttat gccgacttga cggcgagttc cgccaagcgt
    24781 ttgctttgtg cgaaggcgat attgttttct tcggcggtca ggacgggagc cgctgtcggg
    24841 aatatctttt ttgacggctt cgcagacggc ggagactttg gggacggtgc gcaatacggc
    24901 ttcgcaacct tcaacgctgt cgatgccgcg agcgattcgg agtgcgggat tgcgggtgct
    24961 gccgttttgg aaatagtaga ggacgaggat tttgaggggg atttgggttc atgggcggat
    25021 tccgttaaaa tggttcggtc ttcagacggc ataacagttg ttccgatgcc gtctgaaaca
    25081 gccgcagttc aggcatttgt tcctgacggc aaaattggct ataacatcgg gcatcaatgc
    25141 ccaacttact gaccgggcaa gaaattatga cctttttaca acgtttgcaa ggtttggcag
    25201 acaataaaat ctgtgcgttt gcatggttcg tcgtccgccg ctttgatgaa gaacgcgtac
    25261 cgcaggcggc ggcaagcatg acgtttacga cgctgctggc actcgtcccc gtgctgaccg
    25321 tgatggtggc ggtcgcttcg attttccccg tgttcgaccg ctggtcggat tcgttcgtct
    25381 ccttcgtcaa ccaaaccatt gtgccgcagg gcgcggacat ggtgttcgac tatatcaatg
    25441 cgttccgcga gcaggcgaac cggctgacgg caatcggcag cgtgatgctg gtcgttacct
    25501 cgctgatgct gattcggacg atagacaata cgttcaaccg catctggcgg gtcaattccc
    25561 agcgtccgtg gatgatgcag tttctcgtct attgggcttt actgacgttc gggccgctgt
    25621 ctttgggcgt gggcatttcc tttatggtcg gctcggtaca ggatgccgcg cttgcctcag
    25681 gtgcgccgca gtggtcgggc gcgttgcgaa cggcggcgac gctgaccttc atgacgcttt
    25741 tgctgtgggg gctgtaccgc ttcgtgccaa accgcttcgt tcccgcgcgg caggcgtttg
    25801 tcggggcttt ggcaacagcg ttttgtctgg aaaccgcgcg ctccctcttc acttggtata
    25861 tgggcaattt cgacggctac cgctcgattt acggcgcgtt tgccgccgtg ccgttttttc
    25921 tgttgtggct gaacctgttg tggacgctgg tcttgggcgg cgcggtgctg acttcttcac
    25981 tctcctactg gcagggagaa gcgttccgca ggggcttcga ttcgcgcgga cggtttgacg
    26041 acgtgttgaa aatcctgctg cttctggatg cggcgcaaaa agaaggcaaa gccttgcctg
    26101 ttcaggagtt cagacggcat atcaatatgg gctacgacga gttgggcgag cttttggaaa
    26161 agctggcgcg gtacggctat atctattccg gcagacaggg ttgggtgttg aaaacggggg
    26221 cggattcgat tgagttgaac gaactcttca agctcttcgt ttaccgtccg ttgcctgtgg
    26281 aaagggatca tgtgaaccaa gctgtcgatg cagtaatgat gccgtgtttg cagactttga
    26341 acatgacgct ggcagagttt gacgctcagg cgaaaaaaca gcagcaatct tgagtatttt
    26401 tgaaactgta tttttatcct aaagacattt tcctatctgc tgattccacc gtttcctttc
    26461 tgtgtgccgc cataattttt atgatagaca agccattcaa gtttgcattg actgcttttt
    26521 cattggcaat atccaaatgg ctggtcgctg catctaaaaa taggattttc ggttcgcaat
    26581 ataaggcccg cgccaatacg atgcgttgtt tttgtccgcc tgacagtgcg ctgcccatat
    26641 cgccgatcaa ggtttcatag cccataggca tggcggagat ttcttcgtga atcatagcaa
    26701 ggcaggcgca atgttcgatt tttcctctat ccggttccgt atcgaaaaaa caaggggctg
    26761 tactagatta gccctaaatc ccacaccaat cccgcaggat tttaagctgt tgagacggtg
    26821 tgccgaagtt aaatcgaaat tcgcattctt tcaagaacag cgggaaagat ttacgatcga
    26881 ttccgttgta ttttcgcaag acgcgtttag tctagagtct gtatattaca tttattttta
    26941 gggtctgcta gccaatttct tgttcccttc attattttat cttctgaaag aaaattattt
    27001 ttttccatgc tattaatatt aatgatatga tttttattta aaataatttt tccatataaa
    27061 atttccggtt tgtaatagca agagtctgaa gcaaatcctt gcccgtcaat ataagaaaaa
    27121 taaatgttat catcctcctt ataatattct aaaaccaatc cggatattat tttatcaaaa
    27181 ttcccttcat ttccatcttt catgactaaa atataattag caggccaacc tttatcgtaa
    27241 acatattcaa actgatagtt cccgaaactc tcgatatccg aactaaaaaa gaagaaaagc
    27301 aaattaatag ccaatacaaa aacaaataag aacaaaaata gcaaaatttt caacttagtt
    27361 aacaatattt acctctcctt taaattcaat cctgaaaggt accccttacc ctgggctacc
    27421 aattatagtt tccatatttc taaatattgt ttttacatta cttttttctc cccccaaagg
    27481 aatgcatttt aaaatcatgc ttttcaggtg ctaatcgata cttaccatta acatctttaa
    27541 tcacagatat atttccatgt atagcccaac gtgaaaaatc tgagtattat atacagttat
    27601 accttactga aacaaagcta gctgtacata tctgtaccat atttttacta aaaacaaaaa
    27661 atatttataa ttattaagga taagataaaa accccaacgc cagattaatt ctcaataatt
    27721 tcaaataaaa aatatttgag attttttctt ttccaaataa tatattgaaa tatttaaagt
    27781 taaggtagct tgatttaatt agaaaatcaa aaaaaccatt aattaatttt tcttctttaa
    27841 atattttata tgatattata aaattaaata acattgcgaa aacatatgaa atcatcaaaa
    27901 taccaaatat atagtgggaa tgcattatta tttagctcct tcttttggct ctgacaaatt
    27961 gacagtccat tgatatccaa tgcttgcatt tgcaattgct gacgcacctg cccctgtttt
    28021 ccctgttagt atcaatgatt cttttcttgc aagatgtgca cctgcacaac cacctaatac
    28081 taaaccacca cctattgtaa atccttcctg ttgtatctct aatgataaca ttttcttctt
    28141 gtgccgccct taatacagat tgtggaattg gattgacctg agcaggaact tctaaaataa
    28201 gttttccttc aagctgtctt cctcttagca gattaggtgt acttggaaca ttggaaatga
    28261 caaagtgagt gcgcaaagcc atctgaaggc gatgtgtttg aacctgttga aagcggccaa
    28321 caggctaagt gcgcccgctg ccgcctaaaa ggcggagcgg atgctctatt atggggtgtc
    28381 cggtggaaaa ggggatattt ggtacgaaaa cagccgaaat cctgtgtttg ggtttcggat
    28441 gtcggggaag ggcttttttg caaaggtctc aactcatgtt attgcaaaga tctcatgcct
    28501 tgttttgcca gcaggttgag ttcttctccg gcaatcagcg tggtaaagcc ccgccacaac
    28561 acagatctat gtactgtgga agggcttcaa tttatagctt tcgaaaatct ttcagcttta
    28621 agacggccta aagttgtaat ctataaaaca ggagctcaga gttttacggc tcactctcgc
    28681 ttcgcgttac caaataccag cttatcggtt ttgaacgtat agtaatctat ccaatcctgc
    28741 agatattcat acggataaga caagtcatac tgtttcataa aatcgaagat gtcttgatat
    28801 tcgtctgccg gcagcggatc gtaaacaatc aaatccctcg gtgcgatttc gtggtctatg
    28861 cccaaatcga aaccgtgcat ggatgcgatt ttggcgtagg taacgatttg cggctgcagg
    28921 tagaaatcga aataggacaa tgtttctttg gcagccatac gcgcggtttt tttatcgaaa
    28981 agcggctcta aggcggcctt catcgcctcg gcatcctgtt cggcgaaagc gaggaagaag
    29041 cggtaatcgt acaaccgctt ttgcagccat ttgctagggg tggggtgcac caagactttc
    29101 tcgctacgtt gtttcaaccg atcaagctgc ttaccttcca ccatcagcag agtattgtaa
    29161 atcatatgcc ggttgaggtc gtagcggttt acgaaggctt ctgtatcgtt ggcgatgttg
    29221 tcgatattgc gcaccagaaa ctcacgcagc tgcgggctgt cgctcatcag catcagaaac
    29281 atcggatctt gaatgttgag catatcacag ggaaagaaga agggttcagg gtctgtagaa
    29341 tttacactcc gcaaaatacc cagctttcct gcaacataag catattgctt gaatttatta
    29401 agatcatgtt caaatagata ggcatgggaa gccgcagctt cagtatacat taaaatatgt
    29461 ctcatcgctg caagcggaac gccttttctt tcatctacat aatctatagc ttcagggcaa
    29521 ccgctattga aattagcagt attgcctatg attacattag taatatgctc ataccatttt
    29581 tgggtggtca tcatattgtg ccccattgtt atctccttat attggtttta gaaggaactt
    29641 tgacagaaag aataacggcc ttacctgttt gacgatcaac gcctgctatt gctgttttta
    29701 atttgccttc ccgctctgct ttgaagacag cagctttagc aggactacca tcaggtaagc
    29761 tatttgcaac ttgtttaatc caatcctcac tcatctgcgt atatccaccc gcaccattcg
    29821 gattcagctg taccgtaccg ttcctaatct gcttactttc tacaatcaaa acgacactac
    29881 catcggcagc ctgccataca tgatcaaaac cgttatttcc gccgtatttg ccgcccgaaa
    29941 gcactctgaa gccattttgt ttagctaaag agtcaaataa ctgctcggtc attttacctg
    30001 tcgtgtccct tccttcgcca atagctttca gcaattgttt gtcagttgct gcagtaaccc
    30061 ttaattcagt ttgaccgatt ttgattttgg ttttactgac atagccctgt gcagtggcaa
    30121 cggttgctgc cttgtccaag gcttttttca tgccttgtaa attttttgcc gctttcgcta
    30181 ctttataggc ctgtatcgat tcaccgatac ccggaaccac acccagcaaa gcaaacaggt
    30241 gatcggcagc ggtctgtgct tgtacaaaac tctgtatatc accgataatt ggaataaatc
    30301 ctgtctgaag aagcaaaact tctcgatatt cttcaggatt ttcacgtatc catttttgtt
    30361 gttccttttg aaattcatca cactttgcac caatgcattt aggatacaaa gtattattct
    30421 ccaccgctat ctgtgctgca tttgccgcag cattcacatc cccgcctgca acggcagtcg
    30481 cagtgccagc cgctagtttc gaataggcag taatcttcgc tttagctttt tcgatttcgg
    30541 tcgcactcat acgactgaaa tcagtattct taaccaaagc ctcaccaaca atctcaccga
    30601 ctgcagcgcc tatcgcgcca tcttgacact tgcccttatt cgccgccgct gccgcacagc
    30661 ccgctacggc atgggcaatc ttatgggcaa tgtagtgctg atccaattgt ttgattttac
    30721 tggctgcctc tccatgcgca gtattcacca aagcagcaag gatattcgct tccagattgt
    30781 ctttcaggct gccgccgttg acagcggtat taatcagtgc ggcactgccc gcattggcca
    30841 ggttgacggt caggttgttg atccactgct tatcgctgac attgttcagt gccgaagcgc
    30901 cgattttgtc ggctacgcct gcggtagcgg cggcaaccac cagatttttc accgtgctgc
    30961 ttctgcccag ctctttcagg gttttgccga catcgccttt gttgttgatg aacgatacgg
    31021 aagcctggct ggccaaagag gcaaatgctg catcggttgc ggcggcggcc gcaccgttta
    31081 atcccaatac ggctccggtt cctgcgcctg aggtgaccac ggtaacggcc agtgcgataa
    31141 tcgccgcacc tgcttcggtt aagccctcct gtttgtagtc ccatttatcg taagcaagct
    31201 gcacctgatt ccagttgatg tttttcgcaa cttgaagctg ttttaaataa gcatactcgg
    31261 gctgtttggt gagggtttcg atttgggttt tcagattgcc tttgggaata tcgacaatgt
    31321 aaccgccggg tgcggacagt acgggcgcaa cgggaccggt gaaactcggc aattgcaagg
    31381 tttcgatgtt actgccccgt cctgcctgtt tttgccatag agcagatttg ctgctgctca
    31441 cggtttcgtt gtggatcgtg gttttgatgc cttcgaggat aatcttggca tctgcccgtg
    31501 cctgctcacc tacgcctgcg cgtatggttg cgccacccag tgtggtttca aactgtgtgc
    31561 cttgcagttt ggtatcccag cccgattgga ggttggctga ttctgcaact acccttgagg
    31621 gcagcgcggt tttcatgact tgggtggtgg tgtcgtgtgc tttgctgtag ctgatgccga
    31681 gaaatctgcg ccttttttgg ctgtctagtt tgtcgtagtt gagctcttct acggcataga
    31741 gtgtcaattt ccgcccggct tcgatgttaa tgctgccttt gggggcatcg aatgcggtgg
    31801 cgtaggcgtc gatgctgcca ccagatttga tgtcgatgcc ttgggatgcg ctgaggttta
    31861 ctgcgtcggg cttggcgttt ttgtgttctt tgacttcggt aatgtgtttg cggttgtacc
    31921 atttgccagt tttgtagctg cggcgttcaa aggtatagag ttcgctctgt ctcgcatagt
    31981 aatattggtc accgtaagat tgaattttga ttttgccgtt ttccgaactg atatccgtgg
    32041 tgctgagcag gatgcgactg ttctcattgg catacggtgc gctaatgctc acaccggttt
    32101 tacccgaaag ttctgcagca agcgtagggg gtgtcttcag cacgcacgcg tctgggcagt
    32161 atatagggaa tctgaatatt tacttgcata acaaatgccg tctgaaaaat tgtgagcttt
    32221 tcagacggca ttgagccgta aatcatggaa cgcgtgcgtg ctgaagcaca caccttacgc
    32281 atggatttta ggtttcatgc aggctacagt ttgtttgaga atatgttttt tgtatttctt
    32341 tacacttttt ttgatattca gggtgagcta ttaagaaatc agatattgca atattaaagt
    32401 aatgatatgc taaattaata ggtataatta attcttcagg attgaaatca tctccaactg
    32461 aaaaataaat agaaggagct ttatcaatat actcaaatcc atttacctct tcataatctc
    32521 caatccatct ggtagcatct attttttcat attgagcacc tattactcca aaatgtccgg
    32581 tagttgtaat atttttaaaa cactctaaaa gcgtatcttt agtttcaaat tggtaaattg
    32641 tttcaaaaaa aatcgaaata acaaaatggt tgttatttat agatttttta tttaagttta
    32701 gaaaaatatt atttttcata atttttcctt taaattattc tgggtgaatg tttgtaattc
    32761 ttcctgtatt tacatcaaaa tatgatctaa atttgattcc gtcaaaggtt tctgagaatt
    32821 gaatgacatt ttttctttcc gatattgatt tagttctttc attttgagca attttagagg
    32881 cttttgaata tccttgtgaa gcagcatttt gagccatttg aagtatttta tcatcagaaa
    32941 attttttagg attataaaca gtttttatac ttgaaatttc cttaaatcca ccatcaggtt
    33001 tacctgtcct gtctagtgta ggaatctcat atttaattcg ggtaatgcct tcaatatcag
    33061 tttgggtttc agattttacg cgtcctcctc gtgaatttag ttctgccata aaattggtgc
    33121 ggttatgggc tcctttaatg ccctgttttt gactaaaacc atcagcattt gccagatgtc
    33181 tttttaggtt tgtatcgaaa ctgatgcctt ccgggtattt gacattagta ataggtgtat
    33241 tttgttttac aaaccctctt ggtattggaa tgaatctagg attaactcct gaaataagtg
    33301 tataaccttg gtcggacatc cattcggata aaggctttgt attgcccgat tgaagccaag
    33361 atttagcagc agtattcaaa tgataagact gtaaagccaa atctgcttgg gtgtaagatt
    33421 tgctgaataa tttataccat tcatcatctt taccaattag acctgcttcc caagatgaat
    33481 gaaggcttct actatcgatc aaatgttgtt ttctgattgt tctacattca gtactacggg
    33541 atatatccgt acatattgca atcgaagcag caagtctttt atcagcaaca ttttgatact
    33601 tttttacagt attttttctg cacagttgag gattattctg tttggcgcat gcagtcattt
    33661 cgttatcaaa ttctctaccc tctttgtcgc taagctgatt atttttcacc gctacctcag
    33721 ccgcattcgc cgccgcattt acatcgccgc cgaccacacc gcttaccgta ccggcaacca
    33781 gtttgctgta tgccaaaatc tgttcgcgtt ctttagctgt caaagtgtca ggatttttgc
    33841 cgtttgtcaa agcctccccg actatctcgc ccacgaccgc accaatcgcg ccgtcctgac
    33901 acttgccctt attcgccgcc gctgccgcac agcccgctat ggcatgggca atcttgtgga
    33961 ctatgtagtg ctgatccaac tgtttgattt tactggctgc ttctccatgc gcagtattca
    34021 ccaaagccgc aaggatattc gcttccagat tgtctttcag gctgccgccg ttgacagcgg
    34081 tattaatcag tgcggcactg cccgcattgg ctaggttgac ggtcaggttg ttgatccact
    34141 gcttatcgct gacattgttc agtgccgaag cgccgatttt gtcggctacg cctgcggtag
    34201 cggcggcaac caccagattt ttcaccgtgc tgcttctgcc cagctctttc agggttttgc
    34261 cgacatcgcc tttgttgttg atgaacgata cggaagcctg gctggccaaa gaggcgaatg
    34321 ctgcatcggt tgcggcggcg gccgcaccgt ttaatcccaa tacggctccg gttcctgcgc
    34381 ctgaggtgac cacggtaacg gccagtgcga taattgcggc tccggctccg gttaggcctt
    34441 cctgtttata gtcccatctg tcgtaagcaa gctgcacctg attccagttg atgtttttcg
    34501 ctacttggag ctgtttcaga taggcatact cgggctgttt ggacagcttt tcgatttcgg
    34561 ttttcagatt gcctttcgga atgtcgacga tatagccgcc gggtgcggac aatttgggcg
    34621 gagtagggct ttcgaagctg ggcagtttta gcgtttcgat agtgctgccg cgtccggcct
    34681 gtttctgcca tacggttgag ttggtttcta atttttcttc cgactggata cggttcacaa
    34741 tgcctttgag gataattttc gcatcggcac gggctttttc gcctacacct gcctgaatgt
    34801 ccgcaccggc cagcgtggtt ttgaattcgg taccttcgag cacggtatcc cagcctgaac
    34861 gggtggctgc agtttgggcg acgacgcgga caggcaattt ggtttcgttc agttcgtttt
    34921 tactgtaatt gctcttgcct accttgatgc cgataaagcg gcggcttttt tggacatcca
    34981 actcgtgctt gtggatgcct tcttctgcca gcagttgcaa ctcttcaccc gcaaccaggg
    35041 taactttacc tgcaggggca ttgaagcggg tggtattagc ttcgatgttg ccgcctgcct
    35101 gaagcgtgat accgttggcg gtcagctcga cgggggctgg cataatcagg tggtcgcggg
    35161 tgctggtaaa cttggttttt ctgatgattt tgccgctttt acctttggtt tttaagaagg
    35221 tataggcatc gttttgtcca gcctccagta caatatcact atgggctttg atgtctatgc
    35281 tgcctgaggg agctttgatt tcggatgcac cgataataat acgtgcatca tcgagtgccg
    35341 cagctgcatg aatacttacc cccgtacgtc cggtcaaacg tgaaggcttg ttcagagcag
    35401 ctttgtcgta gtgactcttg taggtgggct tgccaatttc atattggtcg gttatgccgt
    35461 caatcagaat agcagccgcc tctgaatctg ctgcctttgg caatacgcct gcggcgtgaa
    35521 ggttcagttt tttggaagcg gtaatatcgg aaccgctgat ttcgatgcct tgtgcggaaa
    35581 tcaagtcaat attttgtgca gaaagcttgg cttgcaggta ttctttgcct ttgggttttt
    35641 tacctttaac ttccttgttg atggcttgaa tatagaaagc gagacggtcg cgttcttctt
    35701 gcagggttgg aatcagcttg cttttaggcg agcttttttt caactgcgca atctgctgtt
    35761 ccaattcttt ggatttttgg ttgagttcag ccgctttttg tgtaggaaaa taattgctga
    35821 atgagttgtt tacggcttcg atattcaact tgcctttggt ggtggcgaca accaagtttt
    35881 taccggctgt aattttagaa cctcttaaat ctgtttctcc tgtaaccaga cggatattgc
    35941 cttttgcttc caatgaggaa acttgagcac taggcgcacc tgcatttcct ccttttgcag
    36001 acaacagcaa ttttccgcct gttttgatgc tcaggtcggt atgcgcactg atgcggttgg
    36061 caggttcgat ggttaatgtg ccgctacctg cttcaatatt cagccgtccg gccaatggtt
    36121 ttaattcggc attatcttcc aaagtcttgg tcgaaacggt actccaattg atgttgccgc
    36181 gcttgactag ggcggtaccg gcagtaaggt tgattgcacc cgctctcagc gtggtgttgt
    36241 cggcaatttg ggaatagcgc gcattgagtg ccaatacacc gttagccacc agcttgttgg
    36301 cagaaggcag tttgtcgttt tgccaaatct ggctgccggt aatgcttaga tgacggtgtg
    36361 cgtaggcatc tacttggttg agcgttaccc gctcgtgttg tgcattaaga tgcgtattat
    36421 gggtagactc cagcttggta ttttctatgc tcaatgcccg gtcggaatga atgttcaatg
    36481 ccccgctttt ggcatggacg ttaaggtttt ttaagtcggc attaccaccg ttgtttttga
    36541 tgctgatgtg ttttccgttg attgaattgc gttgttttcc gtcaccaagc tgaataccgt
    36601 tgccggcaac caacgtaata tctcctgaag atgaagtgat attggtattg tctgctttca
    36661 gacggccttt accaaccgat cctgcattga catcggcctt ggctgtcagg gtattgtgac
    36721 cggtaaagtc ggcattaccg ttggccaata aggatacatg accgtctgca gaaacagcat
    36781 gaaggccgtc tgaaacgata ttgccctgca atgcggtggt ttcgagagcc ttggctgcgt
    36841 tcagcttggt attgcgaagc tgaatattgc ctttggctgc ctgaatgtgc agattacccg
    36901 agttggtacg cagattggta ttggtaacat tcagcgagcc tgcctccaca cccatgtctt
    36961 ttgaggcagt gagggtttta ctggtgccgg taatatgggc agcgttatcc gatttcaaat
    37021 ggatgctggc ggcagacaaa tctttatcaa cattcaaatt cagatcttta cctgtatgaa
    37081 catacagatt gccgggagta ttcagattgg tagttttggc agtaatgtta tcgtctgcca
    37141 gtaaagcaag ctgcttgccg cccttgatac tgcctccgtt taagcggata tcggaggtaa
    37201 ctgttgaagc ttccaaagaa agcggtttgc ctgcttcgat gtgtgcggtg tctttggcat
    37261 ctattacggc ggaactgctg atggtgccgt tggataatac ggtaacatct gccccggtaa
    37321 tgcgtgtgtt attgcctaat tcggcgttgc ctttgctgga actgtatacg gtagtgccag
    37381 tctgaatact ggcctccttg atgacggtac ggccgccggt cgacagattg gtcgaacctt
    37441 tagcattgtt cacatttgct ttgctttcga taaccaaatt acggccggca tttaataccg
    37501 tagcagcagg gcggttgccg ttgttttgaa cgaccgctcc gttacgcaaa ccgatgtcct
    37561 ccccggtatc aataaccaat aagcctttgc tctctatccg gccgccattg gagataaatg
    37621 cgcctgctgc gcctgtttcg gtggtttcga tggagagata agtcggtgat gcttcagtgc
    37681 tgtcggcagt ggtggcgatg cggccgctgt tttcaatacg gccggaggaa gtaacgatca
    37741 attgcttggc cgcttcgagt gtgcccgcat ttttgacacc cacgcctttt tcattggcaa
    37801 tcagggtaat gctgtcggcg tacataccac ccaatgcggc agtatcgagg gcaacggtcg
    37861 gtttcgtacc cgctgccgta cctgcgctga tttcaccgct ggcgtaatct actttctgtg
    37921 cgccggtcga aaccgccagg tttttaccct gcaatttccc ctgcaaagca accgcacggg
    37981 caagcacttc ggtgtaatcg gctccgcctt tgtcgttcca acctgacgta ccgacggtca
    38041 atgtgccttg gcgcacgtca aatcccgtca aggcaccgtc tttgccgatt tgaggcgtac
    38101 cggtggttaa gataccgcgg ccgacgtttt taaagccgcc gccgttcacg gtaatgccgt
    38161 tggggttggc gataatcaca tcggcctttt gaccacctac ggtaacgatg ccattgagtt
    38221 tgctggccgc accgcgcacc tcgttcaaaa tcaactgcgc actgcctttg gccagaaacg
    38281 ggttgttgtt gcgatcgttg ttcagtacag cacctttagc gtcgacatca aactgggtat
    38341 agcggttgtg gctcaatcca cgggcattag gagtttggat gttgaccaac ggcgcaccgg
    38401 tattggtttt aagaataacg gcctgctggt ttttgggcgc ggttttatcg gtaatgattt
    38461 gtgcgtgggc aggcaatacc atactgacgg aaaccaaaga gcagaccaag gttttaagcg
    38521 tggttttgag tttactgtaa aggccgtctg aaatttgtgg cgaagccgga gcggaagttc
    38581 ctgcctgttt gccttttccc tgactgttgg cggtttcggc aactgcaacc atagtgttgt
    38641 gctttttgct gaaaacggta cgatgcagac ctttgttcat atttatccct ttaaatgatg
    38701 tttgtaatcg cttcagacgg cctgtaaatg atgaaagact gtctgaatgt cggtaaaaaa
    38761 tgcaggagag ggttagaaac tgtaattcaa attgaagccg taaacggtgt tggccgtctg
    38821 aaaaccttcg ggcttgtgca gcggcttgcc ggcaaataag tcataagcaa atataccgcc
    38881 tactttatgg ctgcctctga agccggccac tgcacccgcc agccgcttgc ccgaggcata
    38941 ttgggcactt tcgcccgata cccgaccata gtccgcgccg agatagaatt gatggcgcgg
    39001 atggaaatgc cagcccaaag tgttctgcca gtagaaacca cgctctccgg aaaggctctg
    39061 ttcaccgtca aatcctcgaa cggtgtagcg gctgccgata gacaacttgt cttgggcaac
    39121 caaaggcgtt ttgttccatt gtgcatggat agcggtttcg taggaaaact gctgtttgcc
    39181 caacataaac ggggccgctg catccaatcc ggcggttatg attttcatac gggatgtgcc
    39241 tggaatagta ccgccgccgt tttcttcagg tgcgggcata ctttggcgca taccggtacc
    39301 ccgtttgtaa gataacttgc cgtccagttg ccagcggttg aggtaagcac ggtggcgcaa
    39361 ttcggcttcc cagcctgcag agcggcggcg ttgcacttcg atttcggcat cgtcgatgta
    39421 tttataggtt tggcgtgtcc ataatttcat tccgactgaa gttttatgaa acctgttacg
    39481 ccaaagcatg cgctcggcgg ccaggctgct ctgatattgt ttgccgttgt aatcgtaatt
    39541 gacggaatag ccttcggttg cttcgtggta acgatgtcca ttgtgattaa aagaaaacag
    39601 ccattttttt acgggcaccg aataatgcac gctgtaactt ctggatccgc ttgcagtttc
    39661 cgtaccggtg gcatcagtca agtccgtttt gtgcgccaaa ccgcgtccat atgaaacata
    39721 aaacaaatcg cttaagccca aagggttatc gaacgataaa gcgacatttc cttgatattt
    39781 gccggtcgtt ttgccgcccg catcatctat accgatactg aaccgtatgg gtttattctg
    39841 ctgccatttg atctgtaaat cgcttttgcc ttcttcttcg gacggtataa tctgaatatc
    39901 tgttttaaca ctcgacaaac gacgcaggtt ttccaagccc tgctctacat cgcgaagatt
    39961 gagaattttg ttcctatata agggaaattt gttattgaat gcactaatac tgccctcggc
    40021 agacttccca tcccgttttt cttcatagcg gatatcccct atttcgcctg ctgatacccg
    40081 taatttcaga attcccgaat ccatattctg tggttggata atagcttggg aagtgaggta
    40141 gccacgcaca atcagtatct gttgcgcggc tttttgtagc ctgctcaaat tattggaacc
    40201 taaacacatc ccagttttaa aagctgtttc tttcatgagc acagaaggaa gaaaagaaaa
    40261 tttgcgcgcc gtcttatcat ctaaactaat gtaatttacc cgagtacacg gtgtttcatc
    40321 ttcactcagg acataattgt tcttctccaa tggttgctcg aaacggacat ttgcatcagt
    40381 taacaattca gcatctatgt gctgctgacg ctgcatggaa cggataagtt ctgcatcgtt
    40441 ttcatcggca gctaaggttt taaggggtat gacagccagg ataaccaaca gacatggagc
    40501 aggaaaaaat ttcatgacat taatattatt ttagcaatat ttactattct gtcataaatt
    40561 taaaagtatt tacagttata gaatgagacc tttgcaaaat tccccaaaat ccccaaaatt
    40621 cccaccaaga catttagggg attttgggga attttgcaaa ggtctcggac agtattttga
    40681 acgcagtgcg cgtaaatccg tatggaaacc atgaaatccc gccacagccg ccagacatgc
    40741 caagccgcat tctgatattt ctgtttgcag gataacaggc agctttttct ttaagcccaa
    40801 agacaggttt tgcagatggg gcatagattt cctttttgaa aaatagggat taggaagttg
    40861 gatgtatttt agaaaggccg cctgaaaagg tttcagacga ccttttgcga ctagctgcta
    40921 ttttatttaa agcttttctc taacaaacga gctaatattt ttcctgtaat aaaacagata
    40981 aaaaacagca tccaatacgt cagattggaa aaatcggtcg tatagagaat caacatataa
    41041 agaagcagca tgatgccgag tgcgatgaat tgataatgtt tggcaaacat catgacctcc
    41101 tcaactatta aggcaaaccg cctgaatatt ctcgttcaat cgtttcggca atttccctat
    41161 aacgtcgata ccatgaccag tcgaaatttt caatggcatg gctcgcaaac gtaccaaatt
    41221 caggcatccc tatgcggcta cctgctaaag ctccgattgt agctccccaa ccaggcggat
    41281 tactgaacgt attgtttggc aatcctaaag atttatcagg atttcccgta tcgttaagcc
    41341 ctgcagattc gcaaatttcg caataatatg aactttgttg cgcattacct gagcctccga
    41401 cccaagtcat ttcatgaaca catatagtgg attaaattta aatcaggaca aggcgacgaa
    41461 gccgcagaca gtacaaatgg tacggcaagg cgaggcaacg ctgtactggt ttaaatttaa
    41521 tccactataa aactctcatt ttgaaactcc ttgtatcgtt aatcaaacaa tcaaaagggc
    41581 agatgcccta tccttgcttt tacaaacgga gacctttgca aaaatagtct gttaacgaaa
    41641 tttgacgcat aaaaatgcgc caaaaaattt tcaattgcct aaaaccttcc taatattgag
    41701 caaaaagtag gaaaaatcag aaaagttttg cattttgaaa atgagattga gcataaaatt
    41761 ttagtaacct atgttattgc aaaggtctca tattgtcttc tggtcgtctg aaaaggtttc
    41821 agacaacttc tttatcttta cagcctcaag tcttacagtt tgcccgacat actataaatc
    41881 agctccaata cccattcgta caatcgccgt ttctcgtgta ggatgtctgc ttccaacgtc
    41941 atgccgattt gcagcggttt ttcctcaccg tatgcagtga tggttggttt gtcgggtttt
    42001 attttcacga gataaacagg ttcgttgctc ttcgccaaat cggaggatac catgcccaat
    42061 cccgacaatt cctgtctgcc cagtgccgtt tttgccactg atcttccgca agtctaatgc
    42121 gccttttctg accgtctatc tgttgcaaaa tatggagttt ctggttttcc aaacgttcga
    42181 cagttgcttt aaggctgcgc gtttcattct cgtgtatcag cttcagacga cccagttcct
    42241 gttctgccaa cgttttcttc aaaactgcct ccgttttcaa ctgctgctgc acgctacctc
    42301 ctgcgccgaa acgtgaggtc gaaagcgcaa atagcttgtc gccagcctta accttttctc
    42361 catcttccac gaatttcgct gtaattgtcc ccgtatccgg tgcatacacc ctgattacgc
    42421 ccgatgcagg taaaatttgt ccctccactg ttgtctttcg cgtatagtta ccaaatatca
    42481 aaaacaggat aatcaataac gcagatatcg atgcaaatgt cgtccatagg gaaaatgaca
    42541 acggtcgtgt cagaatcact ttacccgtca ggctggtttg gcgggcaacg gcgacttcgg
    42601 gacggaagaa gggttgcttg ggtctattca taaaattgaa gttaagaaag tttcagacga
    42661 cccctagaga ttgtctggac gatgagaaat atcagcagta atctgtaccg tcagtgtagc
    42721 cgtttcctga tttatctgct tttgttgcgg gagcagttaa tccatgttca atctcaaaga
    42781 ttggtcttcc gttataagga ggtgcattaa cggcatcatt tacccaatta cgagtcacat
    42841 tgtatacacc atttgcacca gcagcaccgt aagcattttt cggcagataa taaactgccg
    42901 ctgcggcagc aggtattgca accaaatccc cccatgtggg acctcctttg gttgtggcag
    42961 cattagctac atttccagct atattgtctg ttacaggacc tccccctgaa accagcttca
    43021 attcatgaag ttgaagttca atcattttta tactcctttt cttggttggt attcctaaaa
    43081 attcggctaa caaaaacata tggcagatat attgaaaaaa aattcaaagt accctgaata
    43141 aaattcaaat tccaactata tttgttaatg tagtcgagaa gaaacatatc tgataaaaaa
    43201 tatagcactt gataacaagc tattactaat attacgaaaa atgtaaattg cttccagttt
    43261 ttcatagaat ccctcacaaa atttccagaa aatctaactc tatcaactga taaatcaact
    43321 tcctaacttc ttcatatttt ccctgattga agttaaccag tagatttttc aacaataacg
    43381 gttcattctt accgatgtgt tctaacactt ttttccccaa ctcatctacg cttatcttca
    43441 tcccattccc aatcaaatat cccttttcca acgtatccaa attattggca tttaatctca
    43501 acctgacgtc gtctgaaagc ggagtagcgt tgggattcgc gaactgttcg agatgaaaag
    43561 cggtatcggt acgttctttg ccgagaaagt cttcactgaa ggcttcataa ttgacggggt
    43621 cggcaatcat ggcagcaatt tgtgtggcag tatcgttgat acgcgtccta tcttgctccc
    43681 agtctgagaa actgtggcgc agactttcta tggtgggaaa tttcttcatt agccactcga
    43741 ggtaattata gccgtttggt gggaaggtac cgacagcgaa gtggaaggtt tcacagccga
    43801 gcgggatagg tctgtgccac caaccgcgtg ggatgtagag gacatcacct gcttcaagga
    43861 taatatccat atcgatatgt tcaggaatgg aaatatcagt atctttagtc tgttgcatat
    43921 acaatggcat agggaaatca ggggcagtaa gttgccaacg tttcttgccg aaaagctgga
    43981 tggcatacac atcgcggggg tcccaatggt ttttataaga ttcgtcgctg ccaaaagcaa
    44041 gatatccact aacaatagta tgtgcgccgg caaagcgggc gacttgacgg gcgatatggt
    44101 ctgaaaacgg ctcgttgtta atatggttat agactaacga cgcaccattc ttcatatgtt
    44161 cgtagataac ggatttaata aaacggtagc gagttttgcc caaatcgtcg aaactttcga
    44221 cgtattcttc tttaggaacg attgcgcctt ttttacgcag atgaaacagc ggtgcggttg
    44281 ggtctgctcg ttggtatatc tcgttgatat ctttccaaga tgcggattcg agattccgaa
    44341 ccgctccttt aaagagcttg ggcttttgat acagataagt ctgtcggaac gttttaggac
    44401 taatgccgaa gtcgagatgg atgctcatta cttcccctta ctcagaaaat atttaaaatt
    44461 tataatgtta catatattta caaatattaa agtttttttt gtgtgtgcgt caaggaattg
    44521 ttgacaattt tagttaaaaa tttgtctcca aacggaaaaa agcggtttgt tttttgttgt
    44581 taacattttt attgtaatta aataaaaggt cgtctgaaaa cggttttcag acgacctttt
    44641 gctataatcg ggcttcatcg ccccgttcgg tttggaacct tatgaaaacc ctcgtcctcc
    44701 tcctgctttc cttctccacg accaccgctt tcgccgcata cggtttgggt ttggggcagg
    44761 caccgaaata tcctgccgac tttcgcgcct acggttatgt ttattccgga cggcagggct
    44821 gggttttaaa aacagaggcg gatgccatta aattagacac gcttttcaaa cgctttgtgt
    44881 accgtccttc cgccgccaat caaaaccccg tcggacaagc cgtcggacag cgttcggacg
    44941 gcatacccgc caaccacaca aaggaaaaac catgagtaaa aaaatcaaag tcggcattgt
    45001 cggcgcgacg ggctacacgg gcgtggaact gctgcgcctg cttgccgccc atcccgatgt
    45061 cgaagtcgcc gccgtaacca gccgcagcaa agcgggaact gcagttgccg attactttcc
    45121 gagtttgcgc ggcgtgtacg gcctcgcctt ccaaacgccc gacgaggcag gtttggaaca
    45181 atgcgacatc gtcttcttcg ccacgcccaa cggcatcgcc atgaaagacg cgccgcgcct
    45241 gattgaacag ggcgtgcgcg tcatcgacct ttccgccgac ttccgcatac gggacattcc
    45301 gacctgggaa cactggtacg gcatgaccca cgccgccccc gacctcgttt cccaagccgt
    45361 gtacggattg agcgaactca accgcgaagc cgtcgcacag gcacgcctcg tcgccaaccc
    45421 cggctgctac ccgacctgcg tatccctgcc gctcgtgccg ctgttgcggc aatgccgtct
    45481 gaagcccggt atgccgctga ttgccgactg caaatccggc gtgtccggcg cgggcaggaa
    45541 aggcaatgtc ggttcgctgt tgtgcgaagt cggcgacaac ttcaaagcat acggcatagc
    45601 tggacaccgc cacctgcccg aaatcaggca gaccatcgcc gggcttcagg acggcatcgc
    45661 cgaaggattc gtgttcacgc cgcacctcgc gccgatgata cgcggtatgc acgccaccgt
    45721 ttacctccac ctttcagacg gcatctgccc cgaaaccatc ctgcgcgact attaccgcga
    45781 cagcctgttc gtggacatcc tgcccgccgg ttcgacaccc gaaacccgca gcgtgcgcgg
    45841 cgcaaacctc tgccgcatca gcatccaaca ggcggcgcaa tccgatgtgt gggtcgtcct
    45901 ttccgtcatc gacaacctcg tcaaaggcgc ggcgggtcag gcggtgcaaa atatgaacat
    45961 catgttcgga ctgaaggaaa cacacggctt gggcgcaatc cccctgctcc cctgaagcgc
    46021 aaacggcaaa ccgcaggcat cgtgcctgcg gttttttgat gccgtctgaa agcgacggtt
    46081 tttttgggtt cggacggctt ttggctcatt attccgcgaa aacaaaaatc taaaataccg
    46141 tcattcccgc aaaagcggga atctatagtg gattaaattt aaaccagtac agcgttgcct
    46201 cgccttgccg tactatctgt actgtctgcg gcttcgtcgc cttgtcctga tttaaattta
    46261 atccactata gtttatccgg cttcagcgat ttccgacaca tttccacacg cttcaatttc
    46321 gtcatttctc cggtttcagt cattgccgat aacaccgtgg tttttcattt ctagattccc
    46381 gcctgcgcgg gaatgacggc ggagggcttg ccgtttttcc cggtaaatac ctgcaattta
    46441 aaatcccatc attgccgtga aaacaaacca aaaacctaaa atcccgtcat tgccgcgaaa
    46501 acaaaccaaa aacctaaaat cccgtcattc ccgcaaaagc gggaatctag tttatccggc
    46561 ttcagcgatt tccgacacat ttccacacgc ttcgattccg tcatttctcc ggtttcaatc
    46621 atttccgata acaccgtggt ttttcatttc tagattcccg cctgcgcggg aatgacggcg
    46681 gagagcttgc cgtttttccc ggtaaatacc tgcaatttaa aatcccatca ttgccgtgaa
    46741 aacaaaccaa aaacctaaaa tcccatcatt gccgcgaaaa caaaccaaaa acctaaaatc
    46801 ccgtcattcc cgcaaaagcg ggaatctagt ttatccggct tcagcgattt ccgacacatt
    46861 tccgcacgct tcaatttcgt catttctccg gtttcagtca ttgccgataa caccgtggtt
    46921 ttttatttct agattcccgc ctgcgcggga atgacggcgg agggcttgcc gttttcccga
    46981 taagtctctg cggcttccca ttatcgggtt tccgtccact tgggaataac gggatttgaa
    47041 atcatgaaaa tgtgtcaaaa a
//
LOCUS       DBBZYD010000004        39989 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.004, whole genome shotgun sequence.
ACCESSION   DBBZYD010000004 DBBZYD010000000
VERSION     DBBZYD010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 39989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.004"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            104..1915
                     /gene="typA"
                     /locus_tag="ACJJDL_000160"
     CDS             104..1915
                     /gene="typA"
                     /locus_tag="ACJJDL_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HGG7572954.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQVVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
     gene            complement(2480..2570)
                     /locus_tag="ACJJDL_000161"
     tRNA            complement(2480..2570)
                     /locus_tag="ACJJDL_000161"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2534..2536),aa:Ser,seq:gga)
     gene            complement(2609..2695)
                     /locus_tag="ACJJDL_000162"
     tRNA            complement(2609..2695)
                     /locus_tag="ACJJDL_000162"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2659..2661),aa:Leu,seq:cag)
     gene            complement(2731..2817)
                     /locus_tag="ACJJDL_000163"
     tRNA            complement(2731..2817)
                     /locus_tag="ACJJDL_000163"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2781..2783),aa:Leu,seq:cag)
     gene            2906..5281
                     /gene="rnr"
                     /locus_tag="ACJJDL_000164"
     CDS             2906..5281
                     /gene="rnr"
                     /locus_tag="ACJJDL_000164"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HGG7572955.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGIDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRQ
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKTQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLATLREQL
                     GLLGLQLGGGDNPSPKDYAALVEQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAGGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(5620..7083)
                     /gene="guaB"
                     /locus_tag="ACJJDL_000165"
     CDS             complement(5620..7083)
                     /gene="guaB"
                     /locus_tag="ACJJDL_000165"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HGG7572956.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(7224..9782)
                     /gene="glnD"
                     /locus_tag="ACJJDL_000166"
     CDS             complement(7224..9782)
                     /gene="glnD"
                     /locus_tag="ACJJDL_000166"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HGG7572957.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAALETLL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTADKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNAKRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGISDARQFAADHF
                     LTEEESDLLAWLVENHLLMSIVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLAGNGGNPHALFGRRQQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAETSNHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEIFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQTLLEQLS"
     gene            complement(9831..10151)
                     /locus_tag="ACJJDL_000167"
     CDS             complement(9831..10151)
                     /locus_tag="ACJJDL_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7572958.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            complement(10475..10948)
                     /gene="bfr"
                     /locus_tag="ACJJDL_000168"
     CDS             complement(10475..10948)
                     /gene="bfr"
                     /locus_tag="ACJJDL_000168"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HGG7572959.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(10976..11440)
                     /gene="bfr"
                     /locus_tag="ACJJDL_000169"
     CDS             complement(10976..11440)
                     /gene="bfr"
                     /locus_tag="ACJJDL_000169"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HGG7572960.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVSRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(11904..12887)
                     /gene="lipA"
                     /locus_tag="ACJJDL_000170"
     CDS             complement(11904..12887)
                     /gene="lipA"
                     /locus_tag="ACJJDL_000170"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HGG7572961.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPRNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(12880..13503)
                     /gene="lipB"
                     /locus_tag="ACJJDL_000171"
     CDS             complement(12880..13503)
                     /gene="lipB"
                     /locus_tag="ACJJDL_000171"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HGG7572962.1"
                     /translation="MKVIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(13505..13780)
                     /locus_tag="ACJJDL_000172"
     CDS             complement(13505..13780)
                     /locus_tag="ACJJDL_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HGG7572963.1"
                     /translation="MTEQKNKTSLIEFPCTFSLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQIKVENQEQLDNIYRALTSHELVKVVL"
     gene            13965..15035
                     /locus_tag="ACJJDL_000173"
     CDS             13965..15035
                     /locus_tag="ACJJDL_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HGG7572964.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLAFALGDTLAPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNTLKAWFPVLMRQGSNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(15232..16179)
                     /locus_tag="ACJJDL_000174"
     CDS             complement(15232..16179)
                     /locus_tag="ACJJDL_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stomatin-like protein"
                     /protein_id="HGG7572965.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(16194..16601)
                     /locus_tag="ACJJDL_000175"
     CDS             complement(16194..16601)
                     /locus_tag="ACJJDL_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HGG7572966.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIAKP"
     gene            16682..17341
                     /gene="ung"
                     /locus_tag="ACJJDL_000176"
     CDS             16682..17341
                     /gene="ung"
                     /locus_tag="ACJJDL_000176"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HGG7572967.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKRKLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            complement(17448..17804)
                     /locus_tag="ACJJDL_000177"
     CDS             complement(17448..17804)
                     /locus_tag="ACJJDL_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572968.1"
                     /translation="MMKKQRHILCVGCLYIILKVNVFPNTGWMEASKGMQGISFSTFG
                     YADAPGYTFSRIVHTLIFLLGKTTGTRTTVSDSSHNVYYVKLLPKPSTKRLCRICRQA
                     NKSCFWKWRQKMPSEP"
     gene            complement(17849..18364)
                     /locus_tag="ACJJDL_000178"
     CDS             complement(17849..18364)
                     /locus_tag="ACJJDL_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572969.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CLSTDLPPIGNYSSERYIPPQTSEPTPSPSNGGQAVKYKAPVKTVSKPAKSNTPPPQQ
                     APVNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(18830..20752)
                     /locus_tag="ACJJDL_000179"
     CDS             complement(18830..20752)
                     /locus_tag="ACJJDL_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7572970.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKFTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIIRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIAVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSLLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(20829..21200)
                     /locus_tag="ACJJDL_000180"
     CDS             complement(20829..21200)
                     /locus_tag="ACJJDL_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HGG7572971.1"
                     /translation="MLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVHKDSVCLSQ
                     CRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGISVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            21397..22704
                     /locus_tag="ACJJDL_000181"
     CDS             21397..22704
                     /locus_tag="ACJJDL_000181"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HGG7572972.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREIRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            22697..23131
                     /locus_tag="ACJJDL_000182"
     CDS             22697..23131
                     /locus_tag="ACJJDL_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572973.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(23190..23459)
                     /locus_tag="ACJJDL_000183"
     CDS             complement(23190..23459)
                     /locus_tag="ACJJDL_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HGG7572974.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(23641..26103)
                     /gene="lon"
                     /locus_tag="ACJJDL_000184"
     CDS             complement(23641..26103)
                     /gene="lon"
                     /locus_tag="ACJJDL_000184"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HGG7572975.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDADHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPSKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DKKRLSETKKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEP
                     SGAEAAAESASKPKPRSRATKH"
     gene            26354..27457
                     /locus_tag="ACJJDL_000185"
     CDS             26354..27457
                     /locus_tag="ACJJDL_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7572976.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQAGLRVADVL
                     KTKPVHKKAADPNNPLAFARNRETTFLYRLKKA"
     gene            complement(27529..29274)
                     /gene="recD"
                     /locus_tag="ACJJDL_000186"
     CDS             complement(27529..29274)
                     /gene="recD"
                     /locus_tag="ACJJDL_000186"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HGG7572977.1"
                     /translation="MERQTDEFAQAAARAAIRFLEHYAGSGDEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEEAFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(29342..30037)
                     /gene="lolD"
                     /locus_tag="ACJJDL_000187"
     CDS             complement(29342..30037)
                     /gene="lolD"
                     /locus_tag="ACJJDL_000187"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HGG7572978.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVLVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNHHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSREEAAEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(30030..31277)
                     /locus_tag="ACJJDL_000188"
     CDS             complement(30030..31277)
                     /locus_tag="ACJJDL_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HGG7572979.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDIGDVALIACISLGLS
                     FVATLYPSRRASKTQPAEALRYE"
     gene            31482..31760
                     /locus_tag="ACJJDL_000189"
     CDS             31482..31760
                     /locus_tag="ACJJDL_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572980.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSDSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(31816..32433)
                     /gene="recR"
                     /locus_tag="ACJJDL_000190"
     CDS             complement(31816..32433)
                     /gene="recR"
                     /locus_tag="ACJJDL_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HGG7572981.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(32500..34038)
                     /locus_tag="ACJJDL_000191"
     CDS             complement(32500..34038)
                     /locus_tag="ACJJDL_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HGG7572982.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKVKPANGKPAYVRLTGLP
                     APVIVEVQAVTPPDDAAARIPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(34098..34472)
                     /locus_tag="ACJJDL_000192"
     CDS             complement(34098..34472)
                     /locus_tag="ACJJDL_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HGG7572983.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQVPSEAEICS
                     WLEQVPLATLLNKRGTSWRKLDAETQQKALFSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFNRQAPCRQG"
     gene            34622..36250
                     /locus_tag="ACJJDL_000193"
     CDS             34622..36250
                     /locus_tag="ACJJDL_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HGG7572984.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            36322..37575
                     /locus_tag="ACJJDL_000194"
     CDS             36322..37575
                     /locus_tag="ACJJDL_000194"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HGG7572985.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWFALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKTFRAAQDKTEKH"
     gene            37798..38106
                     /locus_tag="ACJJDL_000195"
     CDS             37798..38106
                     /locus_tag="ACJJDL_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7572986.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            38188..39219
                     /gene="ruvB"
                     /locus_tag="ACJJDL_000196"
     CDS             38188..39219
                     /gene="ruvB"
                     /locus_tag="ACJJDL_000196"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HGG7572987.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(39242..39970)
                     /gene="rpe"
                     /locus_tag="ACJJDL_000197"
     CDS             complement(39242..39970)
                     /gene="rpe"
                     /locus_tag="ACJJDL_000197"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HGG7572988.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQV
                     RAMLDRYEEKSGRRIAIEVDGGIKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
BASE COUNT         8938 a        10504 c        10828 g         9719 t
ORIGIN      
        1 gaaaggcaag ggcttcagac ggcatcttca tttcccaaat actgtccggt aaagcgtggt
       61 ataatgcgca gttatctctt acagtttttg aaaaacatta attatgaaac aaatccgcaa
      121 catcgccatc atcgcccacg tcgaccacgg caaaaccaca ttggtcgacc aactgctgcg
      181 ccaatccggc acattccgcg ccaaccagca ggttgacgag cgcgtgatgg acagcaacga
      241 cctcgaaaaa gaacgcggca tcaccatcct cgccaaaaac accgccatcg attacgaagg
      301 ctaccacatc aatatcgtcg acacgccggg acacgccgac ttcggcggcg aagtggagcg
      361 cgttttgggg atggtggact gcgtcgtctt gttggtggac gcgcaggaag gcccgatgcc
      421 gcaaacccgt ttcgtgacca aaaaagcctt ggctttgggg ctgaaaccga ttgtcgtcat
      481 caataaaatc gacaaaccgt ccgcccgtcc gagctgggtc atcgaccaaa ctttcgagct
      541 gttcgacaac ttgggcgcga ccgacgagca gttggatttc ccgattgttt atgcttccgg
      601 tctgtccggt ttcgccaaat tggaagaaac cgacgagagc aacgacatgc gtccgctgtt
      661 cgatactatc ttaaaatata cgcctgcacc gagcggcagc gcggacgaaa cgctgcaact
      721 gcaaatttcc caactcgact acgacaacta caccggccgc ctcggtatcg gtcgtatctt
      781 gaacggacgt atcaagcccg gtcaagttgt tgccgtcatg aaccacgatc aacaaatcgc
      841 ccaaggccgc atcaaccagc ttttgggttt caaaggttta gaacgcgtgc cgcttgaaga
      901 agccgaagcc ggcgacatcg tgattatttc cggtattgaa gacatcggca tcggcgtaac
      961 catcaccgac aaagacaacc ccaaaggcct gccgatgttg agcgtggacg aaccgacgct
     1021 gaccatggac tttatggtta acaccagccc gttggcgggt acggaaggca aattcgtaac
     1081 cagccgccaa atccgcgacc gcctgcaaaa agaattgctg accaacgtcg ccctgcgcgt
     1141 ggaagacacc gccgatgccg acgtgttccg cgtatccgga cgcggcgagc tgcacctgac
     1201 cattttgttg gaaaatatgc gccgcgaagg ctacgaactc gccgtcggca aaccgcgcgt
     1261 cgtgtaccgc gacatcgacg gtcaaaaatg cgaaccttat gaaaacctga ctgtggacgt
     1321 acccgacgac aaccaaggcg cggtaatgga agaactcggc cgccgccgtg gcgaactgac
     1381 taatatggaa agcgatggca acggacgcac ccgcctcgaa taccatattc cagcgcgcgg
     1441 cttgatcggt ttccaaggcg aattcatgac cctgacgcgc ggtgtcgggc tgatgagcca
     1501 cgtgttcgac gattacgcgc ccgtcaaacc cgatatgccc ggccgccaca acggcgtgct
     1561 ggtgtcccaa gagcagggcg aggcggtcgc ttacgccttg tggaatcttg aagaccgcgg
     1621 ccgtatgttc gtatcaccca acgacaaaat ctacgaaggt atgattatcg gcatccacag
     1681 ccgcgacaac gatttggtgg tcaacccgct caaaggcaaa aaacttacca acatccgcgc
     1741 cagcggcacc gacgaagccg tgcgcctgac cacgccgatc aagctgacgc tggaaggtgc
     1801 ggttgagttt atcgacgatg acgaactcgt tgaaatcacg ccgcaatcca tccgtctgcg
     1861 caagcgttac ttgagcgaat tggaacgccg ccgccacttt aaaaagctgg attgatgttt
     1921 actggattaa tgtttaaatg atacgcgatg ccgtctgaaa aatttcagac ggcatttttt
     1981 attcggacgg gctttgcggc ttcttgaagc tgtttcagac ggcgtttttc ctacccaatc
     2041 aagaaactgc cgccattttt ccagcggtat atcgccccgt cgcgtttcgg tatcgggttc
     2101 ggcttcccgg cagcatgtcg aacaatgccg tttgaaggaa tacgcctttt gagtccttac
     2161 aagcttagga agaggatata gtggattaac aaaaatcagg acaaggcgac gaagccgcag
     2221 acagtacaga tagtacggaa ccgattcact tggtgcttca gcaccttaga gaatcgttct
     2281 ctttgagcta aggcgaggca acgccgtact ggtttttgtt aatccactat aaaatatacc
     2341 gcaaaacata ccataaaaaa aacggtaacg gatagttgta agcggttgat gacgattata
     2401 gacaataacg ggttttccca atgaaattat tgtttgaata ataaaaaatc ccaaaccgta
     2461 aaagtttggg atttgtattt ggcagagagg aagggattcg aaccctcgat acgctattca
     2521 cgtatacacg ctttccaggc gtgcgactta aaccactcat ccacctctct aatggcggaa
     2581 attatcccaa tcgggataat ttattatttg gtgcccggga gaagactcga acttccacac
     2641 ccatgaggat accagcacct gaagctggcg cgtctaccaa ttccgccacc cgggcaatct
     2701 aaatattgaa ataaagcaaa gcatttgatt tggtgcccgg gagaagactc gaacttccac
     2761 acccgtgagg atactagcac ctgaagctag cgcgtctacc aattccgcca cccgggcttt
     2821 gctttatttg ctgttttgcg gtacagtgtc ctgccgcaaa gaagtcgcta ttatatagtt
     2881 cataaagaga atgtcaacag tccaaatgaa taaaaatatt aaatctttaa atttacggga
     2941 aaaagacccg tttttaagtc gtgaaaaaca gcgttatgaa catcctttgc ccagtcggga
     3001 atggataatc gaattgttgg agcgcaaagg tgtgccttca aaaatcgaat cgcttgcgcg
     3061 cgagctgtcg attacggaag acgagtatgt ctttttcgaa cgccgtctga aggcgatggc
     3121 gcgggacggt caggttttaa tcaaccgtcg gggcgcggtt tgcgcggcgg acaaattgga
     3181 tttggtcaaa tgccgcgtcg aggcgcataa ggacggtttc ggttttgccg tgccgctcac
     3241 gcccgccaaa gacggtgatt ttgttttgta tgaacgccag atgcgcggca ttatgcacgg
     3301 cgatattgtc actgttcgtc ctgccggcat cgaccgtagg ggccgccgcg aagggacagt
     3361 tctggatatt gtcgaacgcg cgcaaagcaa agtggtcggc cgtttctata tggatagggg
     3421 cgtggcgatt ttggagccgg aagacaagcg tctgaaccaa agcatcgtat tggaaccgga
     3481 cggcgtggcg cgtttcaaac ctgaatccgg tcaggtcatc gtcggcgaaa ttgaggttta
     3541 tcctgagcaa aaccggcagg cagtggcaaa aatcatcgaa gttttgggcg attatgccga
     3601 cagcggcatg gagattgaaa ttgccgtgcg caagcatcat ttgccgcacc aattcagtga
     3661 agcgtgtgcc aaagccgtga aaaaaattcc cgaccatgta cgcaaaagcg atttgaaagg
     3721 ccgcgtcgat ttgcgcgacc tgcctttggt aacgattgac ggcgaaacgg cgcgcgattt
     3781 tgacgatgcg gtgtttgccg aaaaaatcgg acgcaattac cgtctggtcg tggcgattgc
     3841 cgatgtcagc cattatgtcc gccccgatga cgctatcgac acggacgctc aggaacgcag
     3901 caccagtgtt tacttcccgc gccgcgtgat tcccatgttg ccggaaaacc tgtccaacgg
     3961 catctgctcg ctcaatccta atgtcgagcg tttgtgtatg gtgtgcgata tggtcatcac
     4021 ttacgcgggc aatattaaag aataccgctt ctaccccgcc gtgatgcgct ctcatgcccg
     4081 cctgacctac aaccaagttt ggaaatggct ttcaggcggc atcgggcatc cgttcaaaac
     4141 acaaatcgac acgctttaca aactcttcaa aatccttcag aaaaagcgtt tcgaacgcgg
     4201 ggcggtggag tttgacagca tcgaaaccca aatgcttttc gacgacaacg gtaaaattga
     4261 aaaaatcgtc cccgttgtcc gcaacgatgc ccacaagctg attgaagaat gtatgctggc
     4321 ggcgaatgtt tgcgcggcgg attttctgtt gaaaaacaag catacggctt tgttccgcaa
     4381 ccatttgggc cccacgcccg aaaaactcgc caccctgcgc gagcagctcg gtctgttggg
     4441 gcttcaactt ggcggcggcg acaacccgtc gccgaaagac tatgccgcgc ttgtcgaaca
     4501 attcaaaggc agacctgatg ccgaattgct gcaagtcatg atgttgcgct ccatgcaaca
     4561 ggcggtttac gaaccgcatt gcgacggaca ctttggtctt gcctacgaag catacgccca
     4621 cttcacctcg cccatccgcc gctatcccga cctgaccgta caccgcgcca tcaaagccgt
     4681 gttgaatcag caaacctaca cgccaaaaaa aagctggcag gctttgggcg tgcatacctc
     4741 gttctgtgag cgccgtgccg acgacgccag ccgcgacgtg gaaaactggc tgaaaaccta
     4801 ttatatgcgc gataaggtcg gcgaagtatt cgaaggtaaa atctccggca tgaccagttt
     4861 tggtatcttt gtaacactgg acggcatcca cattgacggc ttggtgcata tcagcgattt
     4921 gggcgaagac tatttcaact tccgccccga aatcatggca atcgaaggcg aacgcagcgg
     4981 catccgtttc aacatggggg acagggttgc cgtccgggtc gcccgtgccg atttggatga
     5041 cggaaaaatc gattttgtcc tgattgccgg ggggagcggc agggggcgga aagttaaatc
     5101 atccgcgtct gccaaaccgg cagggacggc ggggaaaggg aagccgaaaa ccgccgccga
     5161 gaaaaaaaca gcccgaggcg gcaaagtaag gggaaggggc gcgtctgccg ccgcagaatc
     5221 ggggaaaaag gcaaagaaac cggttccgat taaggtaaaa aaacggaaag gcaaatcata
     5281 atgctgacgg ggtggcttgg ggagggcggg gcatactttc ccgaagccgc cgcccgattt
     5341 tttgatatgg cggccggcgc atcatttcag gccaatcgaa acgcccgtat tgaaagattg
     5401 cgtttatttc caccgccgtt ttaaaggccg gcggtattcg gcagacgggg cgcaaacggc
     5461 gttcagacgg cattttcatt ctttcggcgt gtccgtccga attgctttgc ccgtccgcgc
     5521 aatcagcccg tgcggcttgc cttgaacgga caaaaaatgc cgtctgaaac ccgaaaatca
     5581 ggtttcagac ggcattttgc cttgaaaagg ctgttcaaat cagcggtggt agttcggtgc
     5641 ttctttagtg atttgaacgt cgtgaacgtg cgattcgctc atacctgcgg aagtgatttc
     5701 cacaaattcg gctttttcgt gcatttcggc aatattggcg caacccaagt aacccatact
     5761 ggaacgcaga ccgccggtca gctggtggat gatgttcaca atcgggcctt tgtaaggaac
     5821 gcggccttcg atgccttcgg ggacgtattt gtcggtgctg tcggttttgt cttggaagta
     5881 gcggtcggca gaaccttggc tcatcgcgcc caatgaaccc ataccgcgat aggatttgta
     5941 cgagcggcct tgatagagtt cgatttcgcc cggcgcttct tccgtgccgg caaacatacc
     6001 gccgagcatg acgctgtacg cgcctgcggc gagggctttg gcgatgtcgc cggagaagcg
     6061 gatgccgccg tcggcaatca ggggaacgcc tgtgcctttg agggcttcgg caacgttgtg
     6121 gatggcggtc agttgcggca cgcccacgcc tgccacgata cgggtggtgc aaatcgatcc
     6181 cgggccgata ccgactttga cggcatccgc accggcggcg accaaatcca aagcggcttt
     6241 ggcagtggcg atattgccgc cgatgacttg gatgtgcgga taggtttctt tcacccattt
     6301 cacgcggtca atcacgcctt ggctgtgccc gtgggcagta tcgacgacaa tcacgtccac
     6361 gccggcttcg accaaggctt tgacgcgctc ttcggtatcg ccgccggtgc cgactgccgc
     6421 accgacgcgc agacggcctt cggagtcttt gttggcgttg ggaaactcgg tggtttttaa
     6481 aatatcttta acggtaatca gacctttgag ttcgtctttt tcgttcagaa ccaaaacgcg
     6541 ctcgactttg tgcgtgtgca tcagttcgcg cgcttcgtct atgcttgtgc cttcggggac
     6601 ggtaaccaga cgttcgcgcg gggtcataat ggcggaaacg ggcaaatcga cgcggttttc
     6661 aaaacgcagg tcgcggttgg ttacgatgcc gacgactttg ccgttttcaa cgacgggcag
     6721 gccggacatt ttgcgtttgc gctgcgcacg catttccaag acttcgcgga tgagcgtcgt
     6781 cggtgcaacg gttacggggt ctttgaccac gccgctttcg tggcgtttca ctttggaaac
     6841 ggcgcgcgcc tgcatttcgg gcggcatgtt tttatggatg atgccgatgc cgccttcctg
     6901 tgccatcgaa atggcgaggc gcgcctcggt aacagtgtcc atcgcagcgg aaagcagggg
     6961 gaggttgagt gtgatttcgc gggtgagctt ggtttgaagt ttaacgtctc gcggcagcac
     7021 ggtcgaatgt gcgggaacca acaaaacatc gtcgaaagta taggcttttt ctacgatacg
     7081 cataatgctc ggtctttcag tttgtgcaag atgcacggca ttatagcacg ttaccggcgg
     7141 cttgacagtt tatattgttt gcaatatccc ccgccttcag gcggcatacg gcgtggcggc
     7201 ggaatgccgt ctgaaggcgg gcgttatgat aattgttcca gcagcgtctg cttcaatgag
     7261 gactggattt ttgggttttt caggtcgggg ctaaaaacgg taaaactgtc ttcggcgcgt
     7321 tcatccagtg tggagatttt ggcatagcgc aggctgacgt tgtgggcgaa aaagatttcc
     7381 gccatatcgg cgagcaggaa ggggcggttg acggcggtaa tttcgacgga gtaccagtcg
     7441 gggtagtctt cttcgggggt aatggtgatg cttggcgcga tcggcatgta gcggctgcgg
     7501 cggctgatgc ggcggctgtg gtttgaggtt tcggcaacgg tgtgtccgtg gataaagctg
     7561 ttgagttcgg cttcaagcgc gctttgaatg tcggggtagt cttcgggggc gtgttgtgag
     7621 ggaatttgca cgatgaaggt gtcgaggatg tagtcgtgtt cggtgataaa ggcgcgggcg
     7681 gcgaggatat cgaagccgtg gcggctgaaa atgcggcaga gacgggcaaa caggcgcggg
     7741 ccgttgggca tgaaaaccat gacttgaaag ctgtcgcttt tgggcaggat gcggctgcgg
     7801 acgatggggg tttcaaagtc gtggactagg ttggcggcgt gccacaggat ttcgcgggac
     7861 tggtggcggg cgaagtaggc ggaaccgagc gcgttccaaa gctttttctg ctgtttttcg
     7921 gggacggcgg cgcgggtgag caagtcggcg gcttcttgtt ggcggcggcc gaagagggcg
     7981 tgcgggttgc caccgttgcc tgcgaggtag cgtccggcgg catggaagag gctttccagc
     8041 aggctggcgc gccatgcgtt ccacagcttg ggattggtac cgcgtatgtc ggaaatggtc
     8101 agaaggtaga gcgcgctgag gcgttcgtgg gtttggacgc gtttgcagaa ggcatcgagt
     8161 acgtcggggt cttggatgtc ttctttttgg gcgacgatgg acataagaag atggttttcg
     8221 accagccagg caagcaggtc gctttcttct tcggtcagga agtggtcggc ggcaaattgg
     8281 cgcgcgtctg agatgccttg tatggcatgg tcgccgccgc gtcctttggc gatgtcatgg
     8341 aaaaaggcgg caaggtagag gatgtcttgt ttttcaaagg actgcatcag tgcagaggcg
     8401 tagggcagct cgtggctgtg catatccaag gcaaggcggc ggacgttgcg gacgacggcg
     8461 aggatgtggt cgtccacggg atagatgtgg aacaggtcgt gctggagcag gccgacgatt
     8521 ttttcccacg cgggcaggta gcgtcccaat acgccgtaga ggttgaggaa gcgcagggtt
     8581 tgggtcagtc cgttgccgtt gcggaaaaag ccggcgaagc ggtggcggtt ttcagaattt
     8641 tggtagaagc tgcggttgat tttgcgcgtc gcgccccacc atgcgcgcag ggtttgcggt
     8701 tcgagcgcgg taatgtcgtt gcgctgctgc atgatttcga cgattttgaa aatgtgttcg
     8761 ggccgtctga aaaaaatatc ggtgtgccgc gcggcgattt ggttgttgac ttggatgtag
     8821 tcgtcgtcaa tccgcagggt aacgcgcaac ggggtggagg aaacgcggct ttgcagcata
     8881 ggcgtgagga tgccgcccag ttgtttgacg gttttaatcg cgcggtaaaa cacgcgcatc
     8941 agttcttcgc tttggcggcg gaggttcaag ccttcataac ccatgctttc ggcgacttgc
     9001 ggctgcaaat cgaacagcag gcggtcttcg gcgcgcttgg cgtttaaatg cagatggatg
     9061 cggatgtggg cgaggcggcg gtagccgtgc gaaagcatac cggcttcggc acgcgtcaaa
     9121 atccgctgtt tgagcaggtc gggcaggtcg gtcgccaagc cttgcgcctt cgctatccaa
     9181 agcagggtgt ggatatcgcg cagaccgccc ggacagcttt tgatattcgg ctccaatact
     9241 gcccccgaac cttgcgattt ggcgtggcgg tgttccatct ccaccagttt tgcctcgaca
     9301 aacgccgcca cattgcgctg cgcgttcatt ttttccgcta gtttatccgc cgtttggcgg
     9361 ttgccaaaca aaaacctagc ctctaaaaac gctgtgtccc ccgtaatatc attgcgcacg
     9421 ctttcacata gttcatcaac gctgccgctt tttacagacg gcatcagttt gcagtcccac
     9481 agggtttgga caaaccgggc aatctgttcc tgaatgccgt ctgaaagcgg ggcaggggag
     9541 acaaccgcca aatccacatc cgaacaggga tacagttcgc cgcgtccgaa gccgcctacc
     9601 gccatcaggc ataacgcgct gttttgaaaa tactctgccc acaatgccgc cagtaaggtt
     9661 tcgagtgccg ccgtatattc cctgaaaaat accgacacgc ggttggcttt caaataatgc
     9721 gcttcggcgg catcgcgctg ctgtttgaag gtttccagtg ctgaagacag gtttgcaggc
     9781 atttttattc tttcgattgg cgggaaaaag ggaggcggat ggttcggcgg tcaaataccg
     9841 ctttcagacg gcatttgtcg ggtatcggcg gaattggtca tcagcttcaa ccgttcctgc
     9901 ggcggcagca gcaactgata cgccgccacg cccaaagccg ccgccatttt ttcgatattc
     9961 gacagggcga tgttccagcg tttgcgctcg actgccgaca cataagtcct gtccaaaccg
    10021 cattgccgcg ccaattcttc ttgcgaccaa cccttgttca cgcggaaaag ccgcatattg
    10081 tatgccaata ccgcccgcaa atcctgttcg tcaggcagtt cggcaggcag agtcaatttg
    10141 ttgcccatca tttgcttcca gataaatggt taaagttaag catttgctgt tacggatttt
    10201 acttcacata aaagccaaaa aaaaggggtg gcggcagcca cacccaaaca cacacacatc
    10261 aagaggaaag agataaaatc agacagattg gaaaacagca aacaagcacc ctgaatttca
    10321 tatcggtatt atcaaacaaa aacccttatc aggtattgat tcaaatcaat ttagatttta
    10381 ttcgcaaacc gaaaaagaaa aacggcatat ccgtttatac ggatatgccg tctgatggtg
    10441 cgggggactg ctgtatttgg cagtagtttg tgttttagtc ctcttgcgcc gctgtttgca
    10501 ggtagttggg cagaccgatt ttgccgataa gctcttgctg ggtctccagc cagtctatat
    10561 gttcttcgtt ggtgtctttt tgtttttcca acaaatcgcg gctgacgtaa tcctgttgcg
    10621 cttctgctgt ggcgatggcg gcaagcaggg cttcgtgttt ttcctgttct ttggtcaaat
    10681 cgcaggcgat gatttcttcg gtggactcgc caatcagaag cttgcccagt tcttgcaggt
    10741 tcggcagacc ttcgaggaac agaatgcgct cgatcaaatc gtcggcagct ttcatttcaa
    10801 cgatggactg tttgaagaaa tgttcgccca gttcttcaaa gccccagttt ttcaaaatac
    10861 gggcgtgaag gaaatattgg ttgatggtta ccagcagcaa gcctaagttt ttgttcagct
    10921 cgcggataac caaacggtcg cctttcatac ggactccttt tattccgaat acggattaca
    10981 gttggctttg gtagtagttg ccttcgccaa tcagctcgat caggcgcagc tgctgttcca
    11041 gccagtgggc gtggtcttct tcggtatctt tcagttgggc gaccatcaaa tcgcggctga
    11101 catagtcttg cgcctcttcg cacagtttga tgcctttttt caaagcgtcg cgcacttcgt
    11161 attcggtttg caggtcggct ttgaggcagg aaaccacgtc cgtgccgata ttcagctcgg
    11221 cgcgcgccat tttcggcgta ccgcccagca tcaggatgcg tcggatgaag tcttcggcgt
    11281 gtgtggtttc ttcttccatc tcgtgattga gacgttcaaa aagtttggtg tagccccatt
    11341 cggagtagag gcgggagtgg ataaagtatt ggtcgcgtgc cgccagctcg ccagacagca
    11401 attcgttcat ataatcaaca acagcttgat tgccttgcat aatatctctc tttccgtaac
    11461 ttggttttcg gtatgtctga acagcatctg tgtcgctatt cgggatgcgt gcattgtatg
    11521 caaaagctgt cggcatgaca aattttctat ttaaaataca aacaattatc aaaagaaata
    11581 gggcgtattc cccgatgcct tccaaatcag tatgctgttt cttatcggtt ttttgtgctg
    11641 ttaaaactaa gaatccatat catccataaa gaacatttac acttgttaac catagcgaaa
    11701 agcaaatact gtacggtttt ttatcaaaat ttataatgaa tcgttctcat taaccgacag
    11761 attcttttga gattatcgga ttttgggaat aaattatgcc gtctgagggg ctttcagacg
    11821 gcatagacaa ttaaagctga ttaaacaacg cggcagacag cagcgtagga aattattttt
    11881 tacttcggaa cggtattttg ggtttaatga tgcccgcaac cgccgtggct ttcgcgtaag
    11941 gcttcggcag cctgttcgtc ggcgtggtag ctggaacgta ccatcgcgcc gatggcggca
    12001 ttgctgaagc ccagttcgta tgcttctttt tcaaagattt tgaactgctc gggcgtaacg
    12061 tagcgcagga cgggcaggtg tccgtctgaa ggctggaggt actgtccgat ggtaatcatt
    12121 tcgatattgt gcgcccgcat atcgcgcata atttcacgca cgtcttcgtc tgtttcgccc
    12181 aagccgacca tgatgccgga tttggtcggg atatgcggca tcatttcttt ataacgtttt
    12241 aataagtcta aagaatgttg ataattagca ccgggacggg cttttctgta caggctcgga
    12301 tgggtttcta ggttgtggtt catcacgtcg ggcggggttt cggcaaggat tttgagtgcg
    12361 atgtccaagc gtcctcggaa gtcggggacg aggatttcga ttttggtgtt cgggctggtt
    12421 tcgcggatgg ctttgatgca gtcggcgaaa tgctgtgcgc cgccgtcgcg caggtcgtcg
    12481 cggtcgacgg aggtgatgac gacgtaacgc aggttcatgg ctttgacgga ttcggcgagg
    12541 tttctcggtt cgtcggggtc gagcatattg ggccgaccgt gtcccacgtc gcagaacggg
    12601 cagcggcggg tgcagatgtc gcccataatc atgaaggtcg ccgtgccttt gctgaagcat
    12661 tcgccgatgt tggggcagga ggcttcctcg caaacggtgt gcatcttttg ttcgcgcaaa
    12721 atgtctttga tttcaaagaa tttgcgcgat gggagtttgg cgcgtatcca ttcgggcttt
    12781 ttcagttttt cctgaagggg gacgactttg atggggatgc gcgcggtttt gtccgcgcct
    12841 ctgagtttga tgccgcgttt ggggtcgtcg gttttgattt cactcattgt tgtctgcttt
    12901 cggtgtgaat tgtgtttcaa ggtgtgcggt aagtttggcg gcgacttcgt ccggcgtggg
    12961 gcagggttgg acaaaatccg cgatttgcgt catttccata ccggcgtagc cgcaggggtt
    13021 gatgtgggta aacgggctta aatccatatt gacgttgagc gcaagcccgt gatagacgga
    13081 gccgtttttg atacgcagcc ccagtgaggc gattttgcgt tctccgacat aaacgccggg
    13141 gcgtttgggg tctgccgccg cttcgatgcc gtattctgcc aatgtggcga tgatgctgtt
    13201 ttcaagcgcg gaaacgatgt ttctaacact ggttttgcgc cgtttgaaat caatcatcgt
    13261 ataaacgacc aattgcccgg gcccgtgata ggtaatctgc ccgccccggt cgatttggac
    13321 gacgggaatg tcgtcgcgaa tcagcaggtg ttcgggtttt cccgccagtc cttgtgtgaa
    13381 cacgggcggg tgttcgacga cccacagttc gtcttcggtg tcggcattcc gtccggcatt
    13441 aaaggttttc atcgcttcaa aagtcggcag atattcgacc aaacctttgt gtatgacttt
    13501 catctcaaag taccactttg accagttcgt gcgaagtcag cgcgcggtag atgttgtcca
    13561 attgttcttg gttttcaacc tttatctgaa cggtggcgcc ggtatagttg cctttgctgc
    13621 tcggacgcgt ggtgatgtgg tgcgcctgcg tgtcgggggc gtggaggcgg acggtgtcta
    13681 aaaccgcctg ctcgaactcg ggatgcaccg cgcccattac ttttaatgag aaggtgcagg
    13741 gaaattcgat gagggatgtt ttgttttttt gttcggtcat gatgtgctgc cttatcgtgt
    13801 acggtatgcc gtctgaaggc gggtttgcct ttcagacggc atcggatgtg cgttatttta
    13861 gcctaaaccg cgataacagg ctatcgggaa ggcggaggct tttttgacgg cgcggcggtt
    13921 ctgctatact ggcgcgcaat attattttta gaagggtggt ttttatgtat cggaggaaag
    13981 ggcggggcat caagccgtgg atgggtgccg gtgcggcgtt tgccgccttg gtttggctgg
    14041 ctttcgcact tggcgacaca ctggctccgt ttgcggttgc ggcagtgttg gcgtatgtgt
    14101 tggatccttt ggtcgaatgg ttgcagaaaa agggtttgaa ccgtgcatcc gcttcgatgt
    14161 ctgtgatggt gttttccttg attttgttgt tggcattatt gttgattatt gtccctatgc
    14221 tggtcgggca gttcaacaat ttggcatcgc gcctgcccca attaatcggt tttatgcaga
    14281 acacgctgct gccgtggttg aaaaatacaa tcggcggata tgtggaaatc gatcaggcat
    14341 ctattattgc gtggcttcag gcgcatacgg gtgagctgag caacacgctt aaggcgtggt
    14401 ttcccgtttt gatgaggcag ggcagcaata ttgtcagcag tattggcaac ctgctgctgc
    14461 ttcccttgct gctttactat ttcctgctgg attggcagcg gtggtcgtgc ggcattgcca
    14521 aactggttcc gaggcgtttt gccggtgctt atacgcgcat tacaggcaat ttgaacgagg
    14581 tattgggcga atttttgcgc gggcagcttc tggtgatgct gattatgggt ttggtttacg
    14641 gcttggggtt ggtgctggtc gggctggatt cggggtttgc aatcggtatg gttgccggta
    14701 ttttggtttt tgttccctat ttgggcgcgt ttacaggact gctgctggca accgtcgccg
    14761 ccttgctcca gttcggttcg tggaacggca tcctatcggt ttgggcggtt tttgccgtag
    14821 gacagtttct cgaaagtttt ttcattacgc cgaaaatcgt gggagaccgt atcgggctgt
    14881 cgccgttttg ggttatcttt tccctgatgg cgttcggaca gctgatgggt ttcgtcggaa
    14941 tgttggcagg attgcctttg gccgccgtaa ccttggtctt gcttcgcgag ggcgtgcaga
    15001 aatattttgc cggcagtttt taccggggca ggtaggcggt tccgaaacat atagtggatt
    15061 aacaaaaatc aggacaaggc gacgaagccg cagacagtac aaatagggca acgccgtact
    15121 ggtttttgtt aatccactat atttgaagcg gaatacaacc ttgcccgggt ttaaataaaa
    15181 atgccgtctg aaccccgaaa actggacttc agacggcatt ttcatcacgg cttatttggc
    15241 ggttttgctg ctgtcgataa ttttcatacc ggcagaaatc aggctgccga tgtcggcaac
    15301 attggcgggc ataatcagcg tattgctttc tttggcaaga ttgttgaacg cggcgacgta
    15361 ttgttccgca atcttcaggt tgaccgcatc cgcaccgcct tgggtttgaa gggcggcggc
    15421 aatttgacgg atggcttcgg cattggcttc ggcaacaagg cgcaaggatt ccgcttcacc
    15481 tttggcgcgg ttgatgcggg cgattttctc ggcatttgac gcattgaccg cagcctgagc
    15541 ctcgccttcg gattgttgga tttcggcttc gcgctgaccg ctggcaaggt tgatttgttc
    15601 gattttacgg ccttcggatt cggcgatacg ggcgcgtttt tcgcgttcgg cggtaatttg
    15661 cgcctgcatt gagcgaagga tttcttgagg cggcaccaag tctttaatct cataacgcaa
    15721 aaccttcaca ccccaagccc cggccgcctc gtccaaagcc gcaacaacag tactgttgat
    15781 ttcgtcgcgt tcttcaaacg ttttgtccaa ctccatacgc ccgataacgg aacgcagcgt
    15841 cgtttgggca agctgggtaa ttgccatgat gtagttgctc gaaccgtatg aggcgagttt
    15901 ggggtcggtt acttggaaat agatgatgcc gtcaacagtc agctgcgtat tgtcgcgcgt
    15961 gatgcagacc tggctgggta cgtctaaagg gatttctttc agcgaatggc ggtaggcaac
    16021 gcggtcgata aagggaatca aaatattcaa accggccgtc agggcgcgat ggaaacgccc
    16081 gagcctttcg acaacgtgga cttcctgttg tgggatgaca acaaaggatt tgaaaccgaa
    16141 aacggcaacg gctgccaaca agataatgaa aaattccata attcctccga gtgttaaggt
    16201 tttgcgatga taagaaggtt gccttccttg cggacgatta gggcgcgcgt tcctggttca
    16261 agctcttctt gccccgtatt ttgcgcctgc cagtgcgtac cgcgataaaa aacttcgtaa
    16321 cggttgccgc ctgtgtgtcg gaggatttcg acatattgtc cggcatccaa atcctgatat
    16381 gaatccgttt caacttttct aacggcggtt ttggcgtgta cgaaccaaat acccagcgcg
    16441 gaaagcagag cggcggtcaa gacggcggca ggcgtgctgc cggtcagccc gtaagcaatg
    16501 cccgaacccg ccaaagccgc gctgacaacc aaaagataaa ccgttcccgt caataattcg
    16561 atgattaaga cggcaacagc ggcaacaaac catacagtca tacatttccc cacaaagcgc
    16621 gtcgtttgac aaaataacgc aatatcagca gtatagccga atttgaaagg atagggcaga
    16681 tatggacact tggcacgatg cactcggcgg cgaaaaacag cagccgtatt ttcaggaaat
    16741 tttaaatgca gtcaggcagg aacgtttgtc gggacaaatc atctatccgc cggcggcgga
    16801 tgtgttcaac gcattccgcc tgacagcgtt cgaccgggtc aaagccgtca ttctcggaca
    16861 agatccgtat cacggggcag ggcaggcgca cggtttggca ttttccgtcc ggcagggtat
    16921 ccgcataccg ccgtctttac tcaatatcta caaagaattg gaaaccgaca tcgaaggctt
    16981 ttccataccc gcgcacggct gcctgacagc gtgggcggag cagggcgtat tacttctgaa
    17041 cacggttttg acggtgcgtg caggacaggc gcattcgcac gcccttttag gctgggaacg
    17101 ctttaccgat accgtcatca ggcagcttgc gacacaccgc aagcatcttg tctttatgct
    17161 gtggggtggg tatgcacaac aaaaaaggaa actgatagac agtcaaaacc atttgatatt
    17221 gaccgcaccg catccgtctc ctctgtcggc atatcgcggt tttttcggct gccgccattt
    17281 ttcacaggca aacagctatt tgagccggca cggtatcgat ccgataaact ggaagctgtg
    17341 aatgccatct gaatgccaag ttgcttaaac cccactgaag gctgcttttg aaaccggaaa
    17401 caaagtgatt aaggaaaacc ggcccataat gcaaaaccgt ctgaatccta gggttcagac
    17461 ggcatttttt gccgccattt ccaaaaacaa cttttgttcg cctgccgaca aatccgacaa
    17521 agtcgtttgg ttgagggctt tggcaataat ttaacataat atacattatg cgaactatcg
    17581 gaaacagttg tacgtgtccc tgtggtcttt ccaagtagga aaattaaagt atggacaatg
    17641 cggctgaatg tatagcccgg agcatccgcg tatccgaagg tactgaacga tatgccctgc
    17701 atccctttcg atgcttccat ccagccggta ttgggaaata cgttgacctt caatataata
    17761 tacaggcagc cgacacacag gatatgccgc tgctttttca tcatttcttc tgtcaaatcc
    17821 ttggaacggt cgatttgaaa acacggcttt acatacgtcc caattctctt tgcagtgctt
    17881 ggatattttg ctgcctgtcc aatacattgc tttgtaatgc atttatttct tgatggttga
    17941 tgttgccgcc ctttgccaga cgtgcttgtg ataacatttt ttgggcttca gtcagggctt
    18001 tgcgttcgtt gctcaattct gcttcgagaa tggagcgtct gctgttgttt acaggtgctt
    18061 gttgaggcgg gggcgtattg gattttgccg gcttggatac tgttttgacc ggggctttat
    18121 atttgacagc ctgtccgccg tttgacggtg atggtgtcgg ttcggatgtt tggggcggga
    18181 tatagcgttc gctgctgtag ttgccgattg ggggcaaatc ggttgagagg cagcttttgg
    18241 acggcttggt ggtgtaaacg gtttctccgt tgattgtgca ggtgtagatt ttggccgcat
    18301 tcgcacccaa tgggcttgaa atcagggaaa agttgattag gattaagggg agttttgatt
    18361 tcataatgtg cttgatgctc ggataattat ttgatttttt ggtatttttt gtaatgcttt
    18421 cttggcgttt tacgggcttt tcttttcggt tgtttgcttt tgattttctt tcggggcttt
    18481 ggcagcctgc ttgttctttt tcccggcagg ttttttgttt ttctttttac tttctatgtg
    18541 tattttggct tcttaactga gttttttaat tttcaggcgg tatccgcctc cctgatggct
    18601 gctgatttta ggtaaatccg catcggcgca cgatcctgct ggggccgatg tatatacgct
    18661 tttgccattt gagttgcaat ggtatacgga ggcttgcgcc gccgcgccgg aaagggacag
    18721 gagacccaag gcggcaaaaa gtctgatgtt tataccggta aaaggcggtg ataacgcccg
    18781 aattataccg ttattggcag gcaaagataa gcaccctgtc cgcgcttctt tatcgctcgg
    18841 caaactgttt ctcgatttca gtttcaatcc gttccaattc ttcttgacaa gccagccaaa
    18901 cctcttcgat ttgggcaagt tgtgttttga cttttgccag cagggataag gtattttgca
    18961 atttttcttt gtttgcttca aggtaagcgt cttcttgtgc taaaaatgct tcacatgccg
    19021 tctgaatttc ggaaagctgc gccatttctt tttcggcacg gtctattttc tgctgtatcg
    19081 gcttgccgcg tcgggctttt tcctgacgga tttgcgcttc gatgcgcttg gtgtctttgc
    19141 ggctttggct ttgtgcggat gctgcgggtg cggcggcggc gttttcctgt gccaaacgcc
    19201 attggcggta atcgttcaaa tcgccgtcga agttcttcag acggcctttg tcgatcagga
    19261 ggaagctgtc ggtagtcgct tcaagcaggc tgcggtcgtg cgatacggcg attaatgcgc
    19321 cttggaaact ttgcaacgcg agcgttaagg cgtggcgcat atccaagtcc aaatggttgg
    19381 tcggttcgtc aagcagcaac aggttcggct tttgccagat aatcatggca agggcaaggc
    19441 gggctttttc tccgccggaa aaaggttcgg ttttctgtaa cgccatatcg ccaacaaaat
    19501 tgaagccgcc gaggaaattt cggatttctt gttcgcgtac ttcgggagaa agctgctgaa
    19561 tatgccaaac agggttttgg tcggcgcgga tggtgtcgag ttggtgttgg gcaaaatagc
    19621 cgatattgag tttttcggaa cggatgatgc tgccggaaag caaatcgatt ttgcctgcca
    19681 aggctttgat aaaggtggat ttgccgctgc cgttgacacc caatagcccg tagcgtgcgc
    19741 cgctttccag cgacagggta atgtcgtgta ggacagtttt gccttcgtaa cccaaatcag
    19801 cgtgttctag ctttaacaaa ggattgggca gatggtcggg atggtaaaac tcaaaggaaa
    19861 actcgctgtc cagatgcgcg ggcgcaacgc gttctagctt tgccaaagcc ttcatgcggc
    19921 tttgcgcttg aacggctttg gtggctttgg ctttgaagcg gtcgataaag gattgcaaat
    19981 gtttgatttg cgcctgctgt ttgacatagg cagcttgttg ttgcgcgaga cgctgcgcgc
    20041 gttcgttttg gtaaaaatcg taattgccgc cgtattgcgt gaatttttgc tgcgataatt
    20101 caatggtttg ggtagttgcc gcgttgagaa aatcgcggtc gtgggaaatg atgatttgcg
    20161 tgcagggtaa agaagcaaga tggttttcca gccacaagac ggtttccaaa tccaagtggt
    20221 tggtcggttc gtccaaaagc agcaaatcgg cgcggcaaat cagggcttgg gcgagattga
    20281 ggcgcatacg ccagccgccg gaaaaggatt tgacggggcg gctgtgttct tcttgcgaaa
    20341 aacccagccc gttcaacaat tttgccgcgc gggccggcgc ggtataagcg tcgatttctt
    20401 ccaatttggc atgatattcc gcctgcttca tgccgtcatt ttgcgcttct gcctgcctca
    20461 atgccgtctg aaaagcctgc aactcggcat cgccctgcaa aacgtaatcc aaagcggaaa
    20521 tatccaaatc gggcgtttct tgggaaacgg aagcgagccg ccagtttttc ggaatcgaga
    20581 catcgccgcc gtcctgagtg atttcaccct tgattaaggc aaacaggctc gatttgcccg
    20641 ttccgttttt gccgatcaaa ccgacgcgct gaccgggatt gacggtagcg ttggctttgt
    20701 cgagcaggac tttcaaaccg cgttgcaggg tgaggttttt gatttcaatc ataacggaaa
    20761 catcgtcggg cgggaaaagc ccgtatttta cctgaaagtc agtgccgatg ccgtctgaaa
    20821 cgggaaattt acggctgaag ccaagcccaa gccctgcgcc cttccgagtg caggaaaacc
    20881 aatgtcctga atgccgaatc ggtattcatg cattccacgc tgattccgat tcgggaaaaa
    20941 tccgccatga ttttgggatg gataaactcc tgagccgcgc ccgtcccgat aatcaatatt
    21001 tccggatagt caacaggttt gatgtcggac aacaggtttt ccggagtcag atcggacaag
    21061 gttcggcatt gcgacaggca gaccgaatcc ttatgtacaa gcacgggttt atggaaactt
    21121 tgccccgcca gccggattcc gcccgcaccg cattcatatt ccgcaaactg tccgtctatc
    21181 ggattttctt caaacaacat ttttttaccc cgtcgccgca tcatctacac cgaaaggggt
    21241 gcaaaatcag acaaattcat gtaggattgg cagatttcat ctgactcgcc tgccgatttc
    21301 agacggcatt tgattcaaag tgcggcacca ttatatcggc agcggatatt ttcgtctttc
    21361 aatatttaca tttcagtcgg cttacaagga gacacaatga agccagtaaa catcggtctt
    21421 ttaggtttgg gtacggtcgg cggcggtacg gctgccgtgt tgcgggacaa cgcggaggaa
    21481 atttcccgtc gcttggggcg cgaaatccgt atttctgccg tatgcgactt gagcgaagaa
    21541 aaagcccgcc aaatctgccc gtccgcagcc tttgtcaaag atccgttcga actggtcgcg
    21601 cgtaaagacg tcgatgtcgt cgtcgaattg ttcggcggca cgggcattgc caaagatgcg
    21661 gtgttgaaag ccattgaaaa cggcaaacac atcgttaccg ccaacaaaaa actgctcgcc
    21721 gaatacggca acgaaatctt cccgctggcg gaagaaaaaa atgtcatggt gcaatttgaa
    21781 gcggcagtag cgggcggtat cccaatcatc aaagccctgc gcgaaggttt ggcggcaaac
    21841 aggattaaat ccatcgccgg cattattaac ggcaccagca acttcatcct ctccgaaatg
    21901 cgtgaaaaag gcagcgcgtt tgccgatgta ctgaaagaag cgcaggcact gggctatgcc
    21961 gaagccgacc cgaccttcga catcgaagga catgacgcgg gccataaaat caccatcatg
    22021 agcgcgctgg cattcggcac gccgatgaac ttttccgcct gctacctcga aggcatcagc
    22081 aaactcgaca gccgcgacat caaatacgcc gaagaacttg gctaccgcat caaactgttg
    22141 ggcatcaccc gcaaaaccgg caaaggcatc gagctgcgcg tccaccctac cctgattccc
    22201 gaaagccgcc tcttggcaaa cgtcaacggc gtgatgaacg ccgtgcgcgt caacgccgat
    22261 atggttggcg aaaccttata ttacggcgcg ggcgcgggcg cattgccgac cgcttccgcc
    22321 gtggttgccg atatcatcga catcgcccgc ctggttgaag ccgataccgc ccaccgcgta
    22381 ccgcatctgg cgttccaacc cgcgcaagtc caagcgcaaa ccatcctgcc tatggacgaa
    22441 attaccagca gctactacct gcgcgtccaa gccaaagacg aaccgggcac gctggggcaa
    22501 atcgccgcgc tgttggcaca agaaaacgtg tccatcgaag cactgattca aaaaggcgtg
    22561 attgatcaga ccactgccga aatcgtgatt ctgacccaca gcacggtcga aaaacacatc
    22621 aagtcggcaa tcgcagccat cgaagcactg gattgcgtgg aaaaaccgat taccatgatc
    22681 cgcatggaaa gcctgcatga ctgagccgaa acacgaaatg ccgacggaag agcaggttgc
    22741 cgcgcgcaaa aaagcaaaag ccaaaatccg caccatccgc atttgggcat gggtcatttt
    22801 ggcgttgctc gcttcaaccg ccctgctctc ccaatgcgcg atgtccaaac cgcaggcaaa
    22861 acagaaaatt gtcgagtctt gcgtgaagaa tattccgttt gccgaaaaat ggcaaaacga
    22921 tttacgggcc cgcggtttag attcaaacaa tacccgcctt accgtcgact actgcaaatg
    22981 tatgtgggag cagcctttgg acagattgag cgagaaacag attagatcct tcggcaaact
    23041 cggcgcacaa gaacagcttg acctgctcgg cggcgcaaat gcctttgaag cacgtgacaa
    23101 gcagtgtgtt gccgatttga aatcagaata atgtggaccg ataaaaaagc cgattcttta
    23161 aagaatcggc ttttttcata aaaaacggct tacagtgcgt ctttcaaagc tttgccggcg
    23221 cggaatttag gcgttttggc ggcggcaatg gtcagaggct cgccggtttt ggggttgcgg
    23281 ccttggcgtt ccgcacgttc gcccacgtag aaagtaccga aaccgaccaa agtaacggtg
    23341 tcgccttgtt tcagggcggt ggttactgca ttggtagtgg catccaaagc tttttgtgcg
    23401 gcggctttgg aaatgtcggc ttcttgagca atcgcttcga tcaattcaga cttgttcaca
    23461 atcagtccct tcctgtctta aaaaatgatg aaatgcccga atactcgggg tttgtactgc
    23521 ttgagcaact ttcgctttat agcaattctg aaattgccgt gtcaagcaaa aaatacggaa
    23581 tcaccctatt tgacaggctt tcaggacgaa accgcatttt tacaacacat ttcctgcgtt
    23641 tcaatgtttg gttgccctgc tgcggggttt tggttttgaa gcggattccg ccgccgcttc
    23701 cgcaccagaa ggttctgccc aaggctcagg ctggctttcc aaacccagag ccaatacctc
    23761 gtctatccat ttgaccggat ggatggtcag gccggttttc acgttttcag ggatttcttc
    23821 caagtctttg aggttgtctt ttggaattaa aacgtgtttg atgccgccgc gaagcgcagc
    23881 caacagtttt tccttcagac cgccaatcgg caggacttcg ccgcgcaggg taatttcgcc
    23941 cgtcatggca acatcggcgc gcaccgggat tttggtgaat gcagacacca tcgccaaagt
    24001 catggcaatg cccgcactcg gaccgtcttt cggcgtcgca ccttcgggaa catggacatg
    24061 gatgtctttt ttctcgtaaa aatcaggagc caagcccact gattccgcgc gggagcggac
    24121 aaccgaccac gctgcagaca cggattcctt catcacatcg cccaactggc cggtgcactg
    24181 aatcacgccc ttacccggca atgctgcggc ttcgacggtc agcagttcgc cgccgacttc
    24241 tgtccacgcc agaccggtta cttgtccgat acggttttcg ctttcggcaa cgccgtaatc
    24301 gaagcggcgc acacccaaat agtcgtgcag atttttctca tttactttaa ccgctttagg
    24361 tttggctttg ctggttttct tggtttcaga caacctcttc ttatcttcgt ccaaggtaat
    24421 ctgcatcacc accttgcggc agattttggc aatctcgcgg tcgagcgaac gcacgcccgc
    24481 ctcgcgggtg tagtaacgga taatatcgcg caccgcgctt tcttcgattg ccaattcccc
    24541 ttctttcacg ccgttgcgct tcatttgctt cggcacgagg tactgcatcg cgatattgat
    24601 tttttcgtct tcggtgtagc cggacagacg gatgatttcc atacggtcga gcagcggggt
    24661 cgggatattc aggctgtttg aagtcgcaat aaacatcaca tcgctcaaat cgtaatccac
    24721 ttcggcataa tgatcggcga acttgttgtt ttgctcggga tcaagcactt cgagcaacgc
    24781 gctggcggga tcgccccgga agtcgctacc caatttgtcg atttcgtcga gcaggaacaa
    24841 tgggtttttt acgccggctt ttgccatatt ctgcagaatc ttactaggca tagagccgat
    24901 ataggtgcgg cggtgtcccc ggatttcgct ttcgtcgcgc acgccgccca aagccatgcg
    24961 gacatatttc cgccccgttg ctttggcgat ggattcgccc aaagaggttt tgcccacgcc
    25021 cggaggaccg accaggcaca gaatcgggcc tttgagtttg tccatacgtt tttggacggc
    25081 gaggtattcc aaaatccgtt ctttgacttt ttccaggccg tagtggtcgg catccagcac
    25141 cagtccggct ttggcgatgt ctttgctgac gcgggatttt ttcttccacg gcagttcgag
    25201 cagggtgtcg atgtagttgc gtacgacggt ggattcggca gacatcggcg gcatcatttt
    25261 gagttttttc agttcggaca ggcatttttc ttccgcttct ttgctcatcc ccgccttttt
    25321 gatgcctgct tccaaggcat ccagttcgcc gttttcgtct tcttcgccca attctttgtg
    25381 tatcgcttta atctgttcgt tcagataata ttcgcgctgg gatttttcca tttggcgttt
    25441 gacgcgtccg cgtatgcgtt tttcggcctg cataatgtcg agttcggatt ccagctgtgc
    25501 cagcaggaat tccatccgtt tgccgatttc gggaatttcc aaaatctgtt ggcgttgcgc
    25561 cagtttcaac tgcaaatgcg ctgcgaccgt atcggttagc cggctgtttt cggcaatgcc
    25621 gttgatgctg ccgataattt cggcggggat ttttttattg agtttggcgt attgttcaaa
    25681 ctgcgccaac agggtgcggc gcacggcttc gaggtcggta ttgccgcccg tgtcttcttc
    25741 cacgaccgcc tctatatggg aaacgaacag accgcccgtg tcttcgatgg tcagaacacg
    25801 tccgcgatac agaccttcga ccaatacttt taccgtgccg tccggcagtt tcaatacctg
    25861 taagacttgt gcgacggtac cggtctgata caggtcggcg gcaaccggtt cttctagcgc
    25921 cgcatcggtt tgtgccaata ggaaaaccgg ttcctcgcgg gtaatggcgt tttccagtgc
    25981 ggcgatggat ttcggcctgc cgacaaacag cggcagaacc atatgcgggt aaacgacgac
    26041 atcccgcaaa ggaagggttg ccaaggcggc atattcctca aaatgctttt ctttttgtgt
    26101 cataggtact ctcttgtgtc tgacagattg ccgattttcg cgtacattgg ggttgaaggt
    26161 attatttcaa gcatatgtgg tttatttatg gagtttgatg cgatgccgtc tgaaacattc
    26221 cggcttcaga ctgcatgggc ttggaaagac aaggcgggaa caaaaaactg ttctgtgttg
    26281 ccgctccttg ctgtaccatc cgtatggttt acggttctgc cgccctattt tcaaaacatg
    26341 acgcaggtat cccatgtctt cttttatttt tcccgataac ggggccgaat ggcgcaacga
    26401 aagtgtgcaa aagccgccca aaggttggca ttatgtccgc gaaagcggtg cagacggcat
    26461 tttgaaggct gcctatcaaa atattgcaac tgtctggcag ggcgatttcc acaatgccaa
    26521 acaggtgctt tctgcaatga agaagagggc tcgcaaacct gccgccgtcc gttccgatgc
    26581 ggatatcgcc gcccttttcc atgcccaccg tatgaagcag gcgcagcaga gccgtattct
    26641 gaatatgctt gccgttgaaa tccgccccgg ttttgtgttg gacaacaaac gcgcgcccga
    26701 tatacgcgcc gccctgctcg acgtgtacgg agaggcggac ggcaaaccgt ttttcctgcc
    26761 gctcaatctg ctgctggggt ttatgggtgc gcacgagtgg cataagaaag gggttgccgt
    26821 tccgcagctg ggcggcagca tacacgttcc tttcggcgta ttctcgccgt tgcgcggcga
    26881 atacctcgac ctgctcgccc atgcgccgtc aacgggtttt cagacggcat tcgatatcgg
    26941 gacgggctcg ggcgtgcttg ccgccatttt ggcgaaacag ggcattcctt ccgtcatcgg
    27001 cacggatacc aatccgaaag ccgtcgcctg cgcccgtgcc aatattgccc gtttgggctt
    27061 tgaaaaacag gttgagatac gggaaaccga tctgtttccc gaagggtttg ccgatctgat
    27121 tgtctgcaat ccaccctggc ttcccgccaa gccgacttcc gccgtcgaat ccgcgttata
    27181 cgaccccgaa tctgcgatgc tggctgcgtt tttgcgggat gcgccgaaac atctgaatcc
    27241 cgacggagaa atccgcctga tcatttccga tcttgccgaa catctgcacc tgcgtccgtc
    27301 cgattttctg gataaggcat ttgctcaggc gggtttgcgc gttgcggatg ttttgaaaac
    27361 caaaccggtt cacaaaaaag ctgccgatcc gaacaatccg ctggcttttg cccgaaacag
    27421 ggaaactact ttcctgtacc gtttgaaaaa ggcataaggg gcggcggtgc gcttccggcg
    27481 gcaggcatcg gaacgcccgc gccgccggca cggcatcatt cgggcggatt attcttgtga
    27541 aaatacccgc tcgagcatac tgcccaatgc cgtctgacgc gttttgacgg tggcggcagc
    27601 ttgccggaag gcttcttccc cgccgaagaa tacgaacttc tctctcgcgc gggtaatggc
    27661 ggtatataac agctccttac tcaatccgga caatgcatcg tccccttcgt ccgaaggtgc
    27721 ggcggaaggc ggcagcagcc atacttcccg gtattccgaa ccttggcttt tgtggacggt
    27781 catggcgaat gcgggttcaa attcgggcag gcagcttacc gctacctttt taaatccgtc
    27841 cgcatcggca aaataggcgg caaggctgcc ctgccgtccg acatcttcca taatcagtcc
    27901 gatgtcgccg ttgaacagtt caagcgcgta gtcgttctgc ctgatcataa tcggctctcc
    27961 ggcaaaatat gccaaatgtt ccggtatgtt cattttgcgg cgtacatggc ggcaataggc
    28021 ttcgttgaag tcttccgcat cctgccgcca agctgccaga accacgatat ccgaaatgcc
    28081 cgcgtatgcg gcttcgatat tgccgtcttt taccgcctgc caataggctt tgtgtgcccg
    28141 gtacaacctt tcgactcgag cgttcggact gcattccgaa tgttccagtt cgtccggaaa
    28201 ccggtcaaac aatgcccacg ccccttcatc gcccgatacg gcggcacggg caaggcagcc
    28261 gatgccgctg ttgtcgccga agcggtggct gaacgacaga tgggcggtgt tttgcgccaa
    28321 cacgggtgga tttgcgctga cgctgaaacc gtgttccgga aggaagccgg ccagcctttg
    28381 gtgcgtttct ccgtccaaaa cggttttttg tgacaaaacg gacagcaccg cccctattcc
    28441 gacggacggg agctggtttt catcccccag cagaatcacg cgcgcgccgg ttttgaccgc
    28501 ttttaaaagt tgcagcatca atgccgtatc cagcatagag gcttcatcga taaccaatac
    28561 gtcaaacggc agcgggtaaa cagggttgaa cgccgcctgc attttgggcg ggcgcagctt
    28621 cagcagtcgg tggacggtct gcccttccag tttgagcaaa tggcggcgga cggcctccgg
    28681 cgcgtcaaaa ccgttgattg cacggtgcag cgcgcgcgcc atatgtgccg ccgctttgcc
    28741 cgtcggtgcg gcaagcgcga tgttgggaag attttcgtct tcaccgcaaa tcagcgccag
    28801 cagtttggca accgttgtcg ttttgcccgt tcccggcccg ccggtaatca ccataaaaga
    28861 ctgcaacagt gccaaggcgg cggcatcgcg ctgcccttcg ctgcccgtgc cttgaaacca
    28921 ttttgcgagg ttttgcctcg cgcctgccgc gtcgggggcg gacgtgtcgg ctgccgccaa
    28981 gcgttttatc tcggcagcca aatcgtattc caactgccac atcctgccca aaaacagcct
    29041 tctgccttcc aaaatcaaag gcgcggcgga tgttccgaca acgggtgcga gtgccgacag
    29101 cgcgtcagcc tcgccaccgc tcaaacggat aaacgaatga ccgttttgca atgcctgaaa
    29161 caggcgttcg gtgcagtttg caagcacttc gtcgccggaa cccgcatagt gttccaaaaa
    29221 acggattgcc gcccttgccg ccgcttgggc aaattcatct gtctgccgtt ccattttatt
    29281 ccttatccaa atgccgtctg aaggcgtggg gcttcagacg gcgcggtgtt gtttcggctg
    29341 tttaggcgtt tgcgccctgt ttggggtgca ggctgccgtc tttcatgacc atcacgcgct
    29401 cgaagcggcc ggcgagttcg tcgtcgtgcg ttacgaccac cagccccgtt cccaattctg
    29461 ttttcagttc cagcatcata tccaaaacat tcctggcgtt cgcacgatcg agattgccgg
    29521 tcggttcgtc ggcaagcagg catttgggtt gggtaaccaa ggcgcgtgca atggcggcac
    29581 gctgccgctc accgcctgaa agttcgcccg cgcggtgcgt cgaacggtgt ttcagtccga
    29641 ccttttccag catcgccatt gccgcctccg cagcctcttc acggcttttt ttgccgatca
    29701 gaagcggcat cattacgttt tccagtgccg aaaattcagg cagaagatgg tggaactggt
    29761 acacgaaacc gagatggtgg ttgcgcagga tgcccagttg tcgctggctt aatgtacgta
    29821 aatcctcgcc catcagcagc accctgcctt cagacggcat atccagcccg cccaaaatat
    29881 gcagcagcgt cgatttgccg ctgcccgaag aaccgatgat gccggtgctt tcccccgcgc
    29941 ggatttccaa atccaagccg tgcagcacca gaacgtccaa accgccgtcc cgatagcgtt
    30001 tgcccacgcc ttcgcatttc aaaatcaact cactcataac gcaaagcctc cgccggttgg
    30061 gtttttgacg cgcgccggct cgggtagagc gtcgccacga aagacagccc caaggaaatg
    30121 caggcaatca gggcaacgtc gcctatatcg acatcgctgg gcaggtagtc gataaaataa
    30181 acctgcgaat tgatgaggtg gacaccgagc aggttttcaa aaaacgccac gaccctgccg
    30241 acgttccaac ccaaaagcac gccgcagacc acacccgcca acgtgccgaa aaagcctgaa
    30301 aacgcgccct gcaccataaa aatcttcatc acgccgccag gggaaagacc caaagtccgc
    30361 aaaatcgcaa tgtccgcctg cttttccgta accgccatca ccaaggaaga gacaaggttg
    30421 aacgccgcca cggcgataat cagcgtcagg atgatgaaca tcatccgttt ttccaactcg
    30481 accgcctcaa aatagcttcg attgctgaac gtccaatcgc gcacccaaac cgtatccctt
    30541 tgcgcctccg gaatcagtgt tgccgtcaag gcgggggcgt tttgcgggtc ggcgagtttc
    30601 agccgcagcc ccgcaacttc cttatccaag cggtacagta cgcgcgcgtc ttggatatgc
    30661 gtcatcgcca atgagttgtc cacttcgtaa acgcccgtct taaccagacc gaccacggta
    30721 aactgcttca ggcgcggcac gactccggca ggggtaacgt tgccctccgg cgtgatgacg
    30781 gtaactttat tgccgacttc cgcccccaaa gcctccgcca agccgacacc gaggataatg
    30841 tcaaactcgc ccggaatcag gtcttcaaat ttgcctgccg gcattttgtc gccgtattcc
    30901 accactttgc gctcttcaga cggcaaaatg ccgcgcatct gcacgcccct gatttcgccc
    30961 gcattggcca gcaatgcctg attggaaaca tagggcgcgg cagccaaaat acctttgcgg
    31021 ttttcggtaa accgaagcag gttgcgccaa tccgtatccg tattgtcgat atagccgatt
    31081 tcggcgtgcg gcgcgacatt caggagctgc ccgcgtattt ctttctgaaa gccgttcata
    31141 accgacaaga cgacaatcag cgcggttacg cccaaggcga ttccggcaat cgaaaccatc
    31201 gtgataaacg acataaagcc gttgcgcttt ttcgccctga gatacctcaa gcctatccaa
    31261 gcctctagag aaaacataac gctaccttaa aaatgtctgc aaacgtgccg ccccggacgg
    31321 cggtttgggg gcggcggcaa aagtttattg taccgtaaaa ccccggcagc gtccgaacgc
    31381 ccgagtgcgg gggacggggc ggcagagcgg gcggaaaact tgcacaacgc gtcaaactgc
    31441 cctatccttt ccttcagaaa aaccgtttct tgaggaaaac aatgaatatc cgaactgctt
    31501 ttgctttgtg cgccatcgcc ttatccgccg ctgcggctgc ctacgccaaa gaaatcaaaa
    31561 tcgatgccaa caacacgcct tattccgaag ccgacgcgca aaagctggcg gcaacggcag
    31621 tcggtatggg tgttaaggaa cctatcagcc tgaacggcgg cagcgacagc attaccgtgt
    31681 ccggcagcag cgcgacgcag tgcgtgttca aagtcggcaa cggaggcgca ttgcagattc
    31741 aagggctaaa ctgcaagtaa accgcccgga aaaatgccgt ctgaaggctt cagacggcat
    31801 tttgcattgg cggcgttatg ccccgccttc tttaatcagg cggcgttcgt acaccgcctg
    31861 cgccagcgtt cccgcatcga catattccaa ttcgccgccc aagggaatgc cctgcgacag
    31921 cctgctgact ttgtaaggca ggtttttaaa aaactcggac aggacatacg ccgtcgcatt
    31981 gccttctgcg gtaaaagcgg ttgcaataat gatttcttcg acttccccgc cgcccagccg
    32041 ttgcgccagc ctgtccaatg cgatggcgga tacgtccatt cccaatgccg tattgatttg
    32101 ccccatcagg acgaaataca gcccgtcgtg gcagtttgcc gcttccatat tcgacacgtc
    32161 ggcaggcata tgcaccacca tcagccgccg cccgtcgcgt gtttcatcgg cacaaatatc
    32221 gcacaatccg ccttcgcaaa acgtgttgca catcgcgcaa tggtaaacct gcttcaatgc
    32281 cgtctgcaag gcatccacca gtttttcagc ctctttgcgc ttgtgttgga gcaaatgata
    32341 cgctatccgc tgtgccgatt tcggcccgac gttgggtaaa accttcagcg cgtcgatcaa
    32401 tccttggaag gcatcttgtt ttttgtggct catcatattc cgccgtatgg gaaaacggcc
    32461 ggaatattcc gaccgttatg ttgtcaacaa aagtgtcaat tactgaccgt cgccgttgtc
    32521 gaccgattgc gctcctttgg tctgtttgat tttgccgttg aaataacgta tcaacaagtc
    32581 gaaggtattg gcagactgct gctgcgccaa agcctgtttt gcaagcggga tgcgcgcggc
    32641 ggcatcatcc ggcggggtta cagcctgtac ttcgacaatc acgggtgccg gcaggccggt
    32701 cagcctgaca taggcgggtt tgccgtttgc cggttttact ttcagcagtt ccgcataagc
    32761 ctcgggcggc atggactgcc ttgcctgctg tgcgcccaaa acggacactt ccgaccattt
    32821 cacgtcaact gccttgccgc cgttcagttg ggtaagcacg tcttttgcct tgttttcggc
    32881 aagtttggcg gcttcggtac ggatataagc ctgacgtacc gcgtctttgg cttcggcaaa
    32941 cggcagggtt ttctcttcgc ggacttcttt ggcgcggacg acccacgcgg tttcgctgtt
    33001 gatggtcagc acttcggaat tgtgtttttt cttcaatacg tcgtcgctga atacggcatt
    33061 gatcaggttt tcgggcatac cggacatttg cgcatcctgc ctgctcagcc aagtttcttg
    33121 ggtttcgact ttcaaaccgc tgtttttggc ggcttcggca agcgaggaag gatggttgaa
    33181 cgcgtcatcg cccagctttt cttttgcctt attgaagtcg gcaaccgcct ttttcatttt
    33241 caattcgttt tctacggcgg ctttttcctg ctcgaaagaa ggtttggctt catttgccgg
    33301 caaacgcgcc acgcgctctt caaacgcatt tttcacttct gtttcgctga cggtctgttt
    33361 gtctgcaaag tctttcagat tcaaggcgac atattccaat ttgaccgctt tgggaagcag
    33421 gtagtctttt ttgtttgcgt tataaaactt ctgcaaatcg gcttcagaca ctttgacttg
    33481 ggcgatgaat tcgtcggggt tgaaagtgtg cgaacggatg gtgcggttga cctgcgtcag
    33541 cctgatcagc tgttccgcct gcgcgtcgcc gaccaatacg ccgttttgga cgaggtttac
    33601 caaattctgc aaggcaaact gatcgcggat ttcttcgaca aactggtctt cagacatatg
    33661 gcgttgcgac aggtagcggt ttaaaagcgc gtggtcgaat ttgccgtttg cgtcgtggaa
    33721 attgggatca tccacgataa tctgcttgat ttgttcggaa gaaaccgaaa tgcccatcag
    33781 cttcgcgccc tgtttcaggt aggcgcgttg cagcagggat tggaacaccg cgtcgcgcga
    33841 agggccgccg ccgtccgcct gttcgttctg tatggcgttg ttgatggagt ggtcgctgat
    33901 tttttcgtcg cccacttgga cgatgtagtc ggcacccgga tgggataccg tgctgacccc
    33961 gaagccgacg aaggttaatg caatcaggcc caaaaggact tgggcgggcg ttctgtattt
    34021 ttcgatggaa tggaacatat tttaaatcgg gatatagaat gggaacggga aattcaagtc
    34081 gggtattgta acggttttta tccctgtctg cacggggctt gccggttgaa gatgccgtcg
    34141 taggtttctt cgctgaagcc ggcgtaaacc ttgccgccgc actccaatac gggacgcttg
    34201 atcaggctcg gcatttcgga catcagtttg acggcctccg ctgtcgagaa cagggctttt
    34261 tgctgtgttt cggcatcgag tttgcgccag cttgtcccgc gtttgttgag cagggttgcc
    34321 aaaggcactt gttccagcca cgagcagatt tccgcttcgg aaggcacctg ttttttaaaa
    34381 tcccgaaatt caaactccaa gccgtatccg gcaagccggt ttttggcttt tttgaccgta
    34441 tcgcaatttg ggatgccgtg aaggactatc atttggaaac cttttgtctg aaataataaa
    34501 acggatattt tactataagt gtctgaaaat ttgcccgtct gtttcagacg gcagggcggt
    34561 tatgttacaa tccgaaaatt cgaaaaattt aatctcttgt tcaataaagg ctttaccaat
    34621 catgatttct accaacggca tcaccatgca gttcggcgcg aagccgctgt ttgaaaacgt
    34681 atccgttaaa ttcggcgaag gcaaccgcta cggtttgatc ggcgcgaacg gctcaggcaa
    34741 atccaccttc atgaaaatcc tcggcggcga tttggaacag acggccggcg aagtggcgat
    34801 tgaaaacggc gtgcgtttgg gtaaattgcg ccaagaccag tttgcctacg aagacatgcg
    34861 cgtgctggac gtggtgatga tggggcatac cgaaatgtgg gcggcgatga ccgaacgtga
    34921 tgcgatttac gccaatcccg aagccaccga agacgactac atgaaagccg ccgaactgga
    34981 agccaagttc gccgaatacg acggctacac cgccgaagcg cgtgccgccg aactgttgag
    35041 cggcgtgggc atttccgaag atttgcacaa tgcgaaaatg gcggaagtcg ccccgggctt
    35101 caaactgcgc gtattgctgg cgcaggcgct gttctccaag ccggatgtat tgctcttgga
    35161 cgaaccgacc aataacttgg acattaatac catccgctgg ttggaaggcg tgttgaacca
    35221 atacgactcc acgatgatta tcatcagcca cgaccgccac tttttgaacg aagtctgcac
    35281 tcacatggcg gatttggact acaacaccat caccatctat ccgggcaact acgacgacta
    35341 catgctcgcc tccgcccaat cgcgcgaacg cgccctgaaa gacaatgcca aagccaaaga
    35401 gaaactgcaa gagctgcaag agttcgtcgc ccgcttctct gccaacaaat ccaaagcccg
    35461 tcaggcaacc agccgtctga aacaggccga caaaatcaaa tcggagatgg tcgaagtcaa
    35521 accttctacc cgtcaaaacc cgtatatccg ttttgaagcc gatgaaaaag ccaagttgca
    35581 ccgtcaggct gtggaagtgg aaaaactggc gaaacgcttt gaaacccagt tgtttaaaaa
    35641 cctgaacttc atccttgaag cgggtcagcg tctcgccatc atcggtccga acggcgcggg
    35701 caaatctacc ctgctgaaac tcttggcggg cgcgtacaac cccgaatatt cagacggcct
    35761 gctgccggac gaaggcagca tcaaatgggc ggaaaaagcc agcgtcggct actatccgca
    35821 agaccatgaa aacgacttcg acgtcgatat ggatctgagc gaatggatgc gccaatgggg
    35881 gcaggaaggc gacgacgaac aagtcatccg aggcactttg gggcgtttgc tcttcggcag
    35941 taacgatgtc gtgaaaaaag tgaaggttct ctccggcgga gaaaaaggcc gtatgcttta
    36001 cggcaaactg ttgctgttga aacccaatgt cttggtcatg gacgaaccga ccaaccacat
    36061 ggatatggaa agtatcgaat ccttgaacat ggcgctggaa aaatacaacg gcacgctgat
    36121 tttcgtctcg cacgaccgtc agttcgtttc ctccttggca acccaaatca tcgaactgga
    36181 cggcaaaggc ggatatgaac actacttggg cgattacgaa agttacttgg agaaaaaagg
    36241 cgtagcataa ccgccggttg gaacaatgcc gtctgaagcc gcttcagacg gcattgttga
    36301 taactttaaa ataggaagca tatgcagact tacctcgtcg gcggcgccgt ccgcgattat
    36361 cttttgggct tgcccgtcaa agaccgcgat tgggtggtcg tcggcgcaga cgcacaaacc
    36421 atgctggcgc aaggcttcca gccggtcggc aaagattttc ccgtgtttct ccatcccgaa
    36481 acgcacgaag aatacgccct cgcccgcacc gagcgcaaaa ccgccaaagg ttacgtcggt
    36541 ttcagtttcc acgccgacaa agacgttacg ctggagcagg acttgatgcg ccgcgacctg
    36601 accatcaacg cgatggcgca agatgcggac ggcaagatta tcgacccttt cggcggacaa
    36661 cgggatttgg cggcaggcat tttgcgccac gtttccccgg ccttcgccga agaccccgtc
    36721 cgcatcctgc gtactgcccg ctttgccgcg cgttacaggt ttgaaatcgc cgaagaaacc
    36781 ataaagctga tgcggcagat ggtggaaaac ggcgaagcgg acgcattggt tgccgaacgc
    36841 gtctggcagg agtttgcgaa aggtttgatg gaaaaaaatc cgcgcaaaat gattgaagtg
    36901 ttgcgcgaat gcggcgcgct caaagtcttg ctgcccgaag tcaatgccct cttcggcgtg
    36961 ccgcaacgcg ccgactacca tcccgaaatc gacagcggca tccataccct gatgacgctg
    37021 caacgcgccg ccgatatggg tttgagcctg cccgaacgct atgccgccct gctgcacgac
    37081 ttgggcaaag ccaaaacacc gtccgacatc ctgccgcgcc accacggaca cgacctcgcc
    37141 ggtgtcgaac ccgtgcgcga agtcaatcag cggctgcgtg cgccgaaaca ttgcgccgag
    37201 cttgccgaat tggtttgccg ttggcacatt attttccacc aagtcggaca gcttaaaagc
    37261 caaaccattc tgaacgtatt gaaaaaaacc gatgccttcc gccgtcccga acgctttcag
    37321 acggcattga acgtctgcat tgccgacacg caaggccgtc tgaaccgcga acacacgccc
    37381 tacccgcaac gcgcacactg gttcgccctg ctcgaagccg ccaatcaggc ggattcgggc
    37441 aaaatcgccg ccgaatgccg cgcgcaggga aaagcgcacc ttatcgccga acaaatcgac
    37501 cgggcgcggc tggcacaaat cgccccattg caaaaaacgt ttcgagcggc gcaagacaaa
    37561 acagaaaaac attaaaacgt ccaatgcagc cacttttata gtggattaac aaaaatcagg
    37621 acaaggcgac gaagccgcag acagtacaga tagtacggca aggcgaggca acgctgtact
    37681 ggtttttgtt aatccactat aaagttttga ggacgatacc caatccaagc tttgcaacag
    37741 ccgccgccat atccgctata attcacgctt cagccatcct gcccccgaca taaaatcatg
    37801 accctgaaaa ccgatttatt gcctaaaatc aacaacgaag attatcaacg cctcatcctc
    37861 aaacacagtg cggaatttag cggtggcgaa atccgcctgt tgaacgaaat cctcgaaaaa
    37921 ttcaatttcg acgttgttca ggcgcaggca ttggcgcaag ccgtcatgca gcaaatccgc
    37981 ttcgacccca acgcctacca catcgacagc gacgacgaag acaccaccgg catctgcccc
    38041 cactgcatca acccgcctat gccgcccctg cgcgactatc tcgtttggcg cgaaacccgc
    38101 ggataaaacg cttttgaccg ttatcttttc aatgccgtct gaaacgccgc cgaccgttcg
    38161 gacggcatac ccgacaaagg gaacactatg ctgcaaaccg acaacctgac cgccgcgcaa
    38221 ccgcaacgca tcgttgccgc ccaaaccgcc tccgcacagg aagaactgct cgaacgcgcc
    38281 ctccgcccca aaacgctgga cgactacatc gggcaagaca aagccaaaga acagcttgcc
    38341 attttcatcc aagccgccaa aaaacgcggc gaagcactcg accacgtttt gctcttcggc
    38401 ccgcccggac tgggcaaaac cacactggcg cacatcatcg ccaaagaatt gggcgtaaat
    38461 ttgcgccaaa ccagcggccc cgtcctcgaa cgcgcaggcg acctcgccgc ccttttgacc
    38521 aaccttgatc cgcacgatgt attgttcatc gacgaaatcc accgcctcag ccctgttgtc
    38581 gaagaaatcc tctatcccgc gctcgaagac taccggctcg acattatgat aggcgaagga
    38641 cccgccgccc gttccgtcaa aatcgacctg ccgcccttca cgctcatcgg cgcgaccacc
    38701 cgcgccggta tgctgaccaa tccgttgcgc gaccgcttcg gcatcgtctc ccgccttgag
    38761 ttttacgaaa accgagacct taccaccatc gtcagccgtt cggcacaact gttgcagctc
    38821 gatatgtccg aagaaggcgc ggaagaaatc gccaaacgca gccgcggtac gccgcgcatc
    38881 gccaaccgcc tgttgcgacg cgtgcgcgat ttcgccgacg tgaaaaacaa cggcacaatc
    38941 gacggcggca tcgccgatgc cgctttaagt atgctggacg tggacgcgca ggggctggac
    39001 gtgatggaca ggaaatttct cgaagccgtt ttgcacaaat tcggcggcgg cccggtcggt
    39061 ttggacaatg ttgccgccgc catcggcgaa tctacagaca ccatcgaaga cgttatcgaa
    39121 ccctacctta tccaacaagg cttcctgcaa cgcaccccgc gcggcaggat ggcgaccgaa
    39181 cgcgcctacc tgcatttcgg gctgcccgtc gaaaaataac gcaatgccgt ctgaaacaga
    39241 gctaattttc agacggcatt tctatttcaa tcattggcgc aaggttcagc ctgccgcttt
    39301 tttccagttc cgccctcatc gcatcaatca ccgccttata gtctggtttg ccgaaaatcg
    39361 cagaaccggc aacaaaggta tccgcgccgg cttgggcggc ggcggcgata ttgtcggttt
    39421 tgatgccgcc gtccacttca atggcaatac gtctgccgct tttctcttca tagcggtcaa
    39481 gcatggcacg aacctgtctg attttttcca aagtatacgg aatgaagctc tgaccgccga
    39541 acccggggtt taccgacatc agcaaaacca tatccagcct gtccaatacg ttttccaaca
    39601 gatatacggg cgttgccgga ttcaacacca gccccgcctg acagcccatg tcccgaatca
    39661 ggctcaagct gcggtcaata tggcggctcg cttcgggatg gaacgtgatg attgatgctc
    39721 ctgctttggc aaacgactga atcaggtcat ccacgggttc gaccatcaga tgcacatcga
    39781 tcggcacgct tgcataaggc ttcaacgccg cgcaaaccat aggcccgaag gtcaggttcg
    39841 gcacataatg gttgtccatc acgtcaaaat ggatcagatc tgcacctgcc gcaatgacgc
    39901 tttccacctc ttcgccaagc cgtgcaaaat ctgccgataa aatgctgggt gcgatacggt
    39961 aagtagtcat gtttttttcc ttcaatatc
//
LOCUS       DBBZYD010000005        38712 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.005, whole genome shotgun sequence.
ACCESSION   DBBZYD010000005 DBBZYD010000000
VERSION     DBBZYD010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38712
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.005"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            294..938
                     /gene="rplC"
                     /locus_tag="ACJJDL_000198"
     CDS             294..938
                     /gene="rplC"
                     /locus_tag="ACJJDL_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HGG7572989.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            938..1558
                     /gene="rplD"
                     /locus_tag="ACJJDL_000199"
     CDS             938..1558
                     /gene="rplD"
                     /locus_tag="ACJJDL_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HGG7572990.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1555..1869
                     /gene="rplW"
                     /locus_tag="ACJJDL_000200"
     CDS             1555..1869
                     /gene="rplW"
                     /locus_tag="ACJJDL_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HGG7572991.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1875..2708
                     /gene="rplB"
                     /locus_tag="ACJJDL_000201"
     CDS             1875..2708
                     /gene="rplB"
                     /locus_tag="ACJJDL_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HGG7572992.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     SNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2715..2993
                     /gene="rpsS"
                     /locus_tag="ACJJDL_000202"
     CDS             2715..2993
                     /gene="rpsS"
                     /locus_tag="ACJJDL_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HGG7572993.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3002..3331
                     /gene="rplV"
                     /locus_tag="ACJJDL_000203"
     CDS             3002..3331
                     /gene="rplV"
                     /locus_tag="ACJJDL_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HGG7572994.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3341..4033
                     /gene="rpsC"
                     /locus_tag="ACJJDL_000204"
     CDS             3341..4033
                     /gene="rpsC"
                     /locus_tag="ACJJDL_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HGG7572995.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4017..4433
                     /gene="rplP"
                     /locus_tag="ACJJDL_000205"
     CDS             4017..4433
                     /gene="rplP"
                     /locus_tag="ACJJDL_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HGG7572996.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4433..4624
                     /gene="rpmC"
                     /locus_tag="ACJJDL_000206"
     CDS             4433..4624
                     /gene="rpmC"
                     /locus_tag="ACJJDL_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HGG7572997.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4624..4887
                     /gene="rpsQ"
                     /locus_tag="ACJJDL_000207"
     CDS             4624..4887
                     /gene="rpsQ"
                     /locus_tag="ACJJDL_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HGG7572998.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5109..5477
                     /gene="rplN"
                     /locus_tag="ACJJDL_000208"
     CDS             5109..5477
                     /gene="rplN"
                     /locus_tag="ACJJDL_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HGG7572999.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5489..5812
                     /gene="rplX"
                     /locus_tag="ACJJDL_000209"
     CDS             5489..5812
                     /gene="rplX"
                     /locus_tag="ACJJDL_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HGG7573000.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5822..6361
                     /gene="rplE"
                     /locus_tag="ACJJDL_000210"
     CDS             5822..6361
                     /gene="rplE"
                     /locus_tag="ACJJDL_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HGG7573001.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6364..6669
                     /gene="rpsN"
                     /locus_tag="ACJJDL_000211"
     CDS             6364..6669
                     /gene="rpsN"
                     /locus_tag="ACJJDL_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HGG7573002.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6685..7077
                     /gene="rpsH"
                     /locus_tag="ACJJDL_000212"
     CDS             6685..7077
                     /gene="rpsH"
                     /locus_tag="ACJJDL_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HGG7573003.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYADRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7091..7624
                     /gene="rplF"
                     /locus_tag="ACJJDL_000213"
     CDS             7091..7624
                     /gene="rplF"
                     /locus_tag="ACJJDL_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HGG7573004.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7638..7991
                     /gene="rplR"
                     /locus_tag="ACJJDL_000214"
     CDS             7638..7991
                     /gene="rplR"
                     /locus_tag="ACJJDL_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HGG7573005.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8010..8528
                     /gene="rpsE"
                     /locus_tag="ACJJDL_000215"
     CDS             8010..8528
                     /gene="rpsE"
                     /locus_tag="ACJJDL_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HGG7573006.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8521..8706
                     /gene="rpmD"
                     /locus_tag="ACJJDL_000216"
     CDS             8521..8706
                     /gene="rpmD"
                     /locus_tag="ACJJDL_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HGG7573007.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8708..9142
                     /gene="rplO"
                     /locus_tag="ACJJDL_000217"
     CDS             8708..9142
                     /gene="rplO"
                     /locus_tag="ACJJDL_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HGG7573008.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9154..10464
                     /gene="secY"
                     /locus_tag="ACJJDL_000218"
     CDS             9154..10464
                     /gene="secY"
                     /locus_tag="ACJJDL_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HGG7573009.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10469..10687
                     /gene="infA"
                     /locus_tag="ACJJDL_000219"
     CDS             10469..10687
                     /gene="infA"
                     /locus_tag="ACJJDL_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HGG7573010.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10708..10821
                     /gene="rpmJ"
                     /locus_tag="ACJJDL_000220"
     CDS             10708..10821
                     /gene="rpmJ"
                     /locus_tag="ACJJDL_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HGG7573011.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10887..11249
                     /gene="rpsM"
                     /locus_tag="ACJJDL_000221"
     CDS             10887..11249
                     /gene="rpsM"
                     /locus_tag="ACJJDL_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HGG7573012.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11269..11664
                     /gene="rpsK"
                     /locus_tag="ACJJDL_000222"
     CDS             11269..11664
                     /gene="rpsK"
                     /locus_tag="ACJJDL_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HGG7573013.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11684..12304
                     /gene="rpsD"
                     /locus_tag="ACJJDL_000223"
     CDS             11684..12304
                     /gene="rpsD"
                     /locus_tag="ACJJDL_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HGG7573014.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12330..13316
                     /gene="rpoA"
                     /locus_tag="ACJJDL_000224"
     CDS             12330..13316
                     /gene="rpoA"
                     /locus_tag="ACJJDL_000224"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HGG7573015.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13340..13708
                     /gene="rplQ"
                     /locus_tag="ACJJDL_000225"
     CDS             13340..13708
                     /gene="rplQ"
                     /locus_tag="ACJJDL_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HGG7573016.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13855..14568
                     /gene="minC"
                     /locus_tag="ACJJDL_000226"
     CDS             13855..14568
                     /gene="minC"
                     /locus_tag="ACJJDL_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HGG7573017.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSDERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQKTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14597..15412
                     /gene="minD"
                     /locus_tag="ACJJDL_000227"
     CDS             14597..15412
                     /gene="minD"
                     /locus_tag="ACJJDL_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HGG7573018.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15416..15679
                     /gene="minE"
                     /locus_tag="ACJJDL_000228"
     CDS             15416..15679
                     /gene="minE"
                     /locus_tag="ACJJDL_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HGG7573019.1"
                     /translation="MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVDVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15683..16603
                     /gene="oxyR"
                     /locus_tag="ACJJDL_000229"
     CDS             15683..16603
                     /gene="oxyR"
                     /locus_tag="ACJJDL_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HGG7573020.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16600..16791)
                     /locus_tag="ACJJDL_000230"
     CDS             complement(16600..16791)
                     /locus_tag="ACJJDL_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573021.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            complement(16933..19770)
                     /locus_tag="ACJJDL_000231"
     CDS             complement(16933..19770)
                     /locus_tag="ACJJDL_000231"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HGG7573022.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHTFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATATEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGEIVQTAFGQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEAQQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQTQLSKLKD"
     gene            complement(19867..20676)
                     /gene="zupT"
                     /locus_tag="ACJJDL_000232"
     CDS             complement(19867..20676)
                     /gene="zupT"
                     /locus_tag="ACJJDL_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HGG7573023.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTTGMAVIAVSLVLFHF"
     gene            complement(20857..22113)
                     /locus_tag="ACJJDL_000233"
     CDS             complement(20857..22113)
                     /locus_tag="ACJJDL_000233"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HGG7573024.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQAKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETKTGRFEADAVVCALGCFSRTVLAQLDLDLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTHFDNLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            complement(22192..23583)
                     /locus_tag="ACJJDL_000234"
     CDS             complement(22192..23583)
                     /locus_tag="ACJJDL_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7573025.1"
                     /translation="MQLFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVLLKGLQF
                     TMLGYALKQAFVPSKKYEGGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWITAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            complement(23940..24716)
                     /gene="lpxA"
                     /locus_tag="ACJJDL_000235"
     CDS             complement(23940..24716)
                     /gene="lpxA"
                     /locus_tag="ACJJDL_000235"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HGG7573026.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTVGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKNVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFAQSTRGIIR"
     gene            complement(24759..25439)
                     /locus_tag="ACJJDL_000236"
     CDS             complement(24759..25439)
                     /locus_tag="ACJJDL_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HGG7573027.1"
                     /translation="MERYKNAVGEDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CLQQAFKDRNWLYNSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDVTGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINKFRNRLAHHEPICFKGAIKDTNYARNIHQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            complement(25646..26095)
                     /gene="fabZ"
                     /locus_tag="ACJJDL_000237"
     CDS             complement(25646..26095)
                     /gene="fabZ"
                     /locus_tag="ACJJDL_000237"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HGG7573028.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(26129..27175)
                     /gene="lpxD"
                     /locus_tag="ACJJDL_000238"
     CDS             complement(26129..27175)
                     /gene="lpxD"
                     /locus_tag="ACJJDL_000238"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HGG7573029.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCRLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            complement(27208..27708)
                     /locus_tag="ACJJDL_000239"
     CDS             complement(27208..27708)
                     /locus_tag="ACJJDL_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HGG7573030.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKVQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(27774..30167)
                     /gene="bamA"
                     /locus_tag="ACJJDL_000240"
     CDS             complement(27774..30167)
                     /gene="bamA"
                     /locus_tag="ACJJDL_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HGG7573031.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(30224..31564)
                     /gene="rseP"
                     /locus_tag="ACJJDL_000241"
     CDS             complement(30224..31564)
                     /gene="rseP"
                     /locus_tag="ACJJDL_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HGG7573032.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(31599..32834)
                     /gene="ispC"
                     /locus_tag="ACJJDL_000242"
     CDS             complement(31599..32834)
                     /gene="ispC"
                     /locus_tag="ACJJDL_000242"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HGG7573033.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(32839..33636)
                     /locus_tag="ACJJDL_000243"
     CDS             complement(32839..33636)
                     /locus_tag="ACJJDL_000243"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HGG7573034.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLSGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(33639..34385)
                     /locus_tag="ACJJDL_000244"
     CDS             complement(33639..34385)
                     /locus_tag="ACJJDL_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HGG7573035.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(34441..34998)
                     /gene="frr"
                     /locus_tag="ACJJDL_000245"
     CDS             complement(34441..34998)
                     /gene="frr"
                     /locus_tag="ACJJDL_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HGG7573036.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(35178..36305)
                     /locus_tag="ACJJDL_000246"
     CDS             complement(35178..36305)
                     /locus_tag="ACJJDL_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HGG7573037.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(36379..36454)
                     /locus_tag="ACJJDL_000247"
     tRNA            complement(36379..36454)
                     /locus_tag="ACJJDL_000247"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36419..36421),aa:Thr,seq:cgt)
     gene            36561..37033
                     /locus_tag="ACJJDL_000248"
                     /pseudo
     CDS             36561..37033
                     /locus_tag="ACJJDL_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            37129..37752
                     /gene="rsmG"
                     /locus_tag="ACJJDL_000249"
     CDS             37129..37752
                     /gene="rsmG"
                     /locus_tag="ACJJDL_000249"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HGG7573038.1"
                     /translation="MERKERLQSGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQGEIDHLPQDVCVEKVQRLDVPGLDAERHIVILRKR"
     gene            37851..38624
                     /locus_tag="ACJJDL_000250"
     CDS             37851..38624
                     /locus_tag="ACJJDL_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HGG7573039.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKASLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELAARVSGK"
BASE COUNT         9086 a         8755 c        10653 g        10218 t
ORIGIN      
        1 tttgacgaac tgagcatccc cgattacagt catcaaccat attccggttt gttggagaaa
       61 gatgcatacg ctgtgatgac cggataccga ccctttaaaa gagtctgacc ctatgccgtc
      121 tgaaaattca aaacgcttca gacggcatat tgaagatatt tctgatattt ctgttgatat
      181 ttctttaact tgtcagatat aatgccgagc ttggtacatt tgtgccaagt ttaactttgt
      241 ctgaaagaca ggccaatcgt agcctgtccc tttactttaa aaggaaaata atcatgactt
      301 taggtctggt tggacgcaaa gttggtatga cccgcgtgtt cgacgaacag ggtgtttctg
      361 ttccggtaac cgttttggat atgtctgcca accgcgttac acaagtaaaa tccaaagata
      421 ctgacggcta tactgccgtt caagttacct ttggtcagaa aaaagccaat cgtgtcaaca
      481 aagccgaagc cgggcacttt gcaaaagcag gtgttgaagc cggtcgcggt ttgattgagt
      541 ttgctttgac tgaagaaaaa ctggctgaat tgaaagctgg tgacgaaatc accgtttcta
      601 tgtttgaagt cggtcaactg gtcgatgtaa ccggtacctc taaaggtaaa ggtttctccg
      661 gcacgattaa acgtcataac ttcggcgccc aacgtacttc ccacggtaac tcccgctctc
      721 accgcgttcc aggttctatc ggtatggcac aagacccggg tcgcgtgttc cccggtaagc
      781 gcatggccgg ccaatacggc aacaccaagg caactgttca aaaattggaa gttgtccgtg
      841 ttgatgcaga acgccaactg ctgttggtta agggtgctgt tccgggtgcg gtcaacagcg
      901 atgttgtagt tcgtcccagc gtgaaagtag gtgcgtaatg gaattgaaag taattgacgc
      961 taaaggacaa gtttcaggca gcctgtctgt ttctgatgct ttgttcgccc gcgaatacaa
     1021 tgaagcgttg gttcatcagc tggtaaatgc ctacttggca aacgcccgct ccggtaaccg
     1081 cgctcaaaaa acccgtgccg aagtaaaaca ctcaaccaaa aaaccatggc gtcaaaaagg
     1141 taccggccgt gcccgttccg gtatgacttc ttctccgctg tggcgtaaag gtggtcgcgc
     1201 gttcccgaac aaacccgacg aaaacttcac tcaaaaagta aaccgcaaaa tgtaccgtgc
     1261 cggtatggcg actattctgt cccaattgac tcgtgacgag cgtttgtttg cgattgaggc
     1321 gttgactgcc gaaactccta aaaccaaagt ttttgctgaa caagtgaaaa atctgggtct
     1381 agagcaagtg ttgtttgtaa ccaaacagct cgacgagaat gtttacttgg cttcacgcaa
     1441 cttgccaaac gtgttggttt tggaagctca acaagttgat ccttacagct tgctgcgtta
     1501 caaaaaagta atcatcacta aagatgcagt tgcacaatta gaggagcaat gggtatgaat
     1561 caacaacgtt tgactcaagt gattttggca cctatcgttt ctgaaaaaag caacgtattg
     1621 gctgaaaaac gcaaccaaat gacgtttaaa gttttggcaa atgcaaccaa acctgaaatc
     1681 aaagcggctg ttgagctgct gtttggtgtt caagttgctt ctgtaactac cgttacaact
     1741 aaaggcaaaa ctaagcgttt tggtcgtact ttgggccgcc gcagcgatgt taaaaaagct
     1801 tatgtaagct tggctgccgg tcaagagttg gatttggaag ccgctgctgc agctgcagat
     1861 aaggaataaa caaaatggca atcgttaaaa tgaagccgac ctctgcaggc cgtcgcggca
     1921 tggttcgcgt ggtaacagaa ggtttgcaca aaggtgcgcc ttatgcacct ttgctcgaaa
     1981 agaaaaattc tactgccggt cgtaacagta atggtcatat caccacccgt cacaaaggcg
     2041 gcggtcataa acaccattac cgtgttgtag actttaaacg taacaaagac ggcattcctg
     2101 ctaaggtaga gcgtatcgaa tacgatccta accgtactgc cttcatcgca ctgttgtgct
     2161 atgcagacgg cgagcgtcgt tacatcatcg ctcctcgcgg tattcaagtc ggtgccgtat
     2221 tggtttccgg tgctgaagct gccatcaaag taggcaacac cctgccgatc cgcaacattc
     2281 ccgttggtac gactatccac tgtatcgaaa tgaaacccgg taaaggtgct caaatcgcac
     2341 gttctgccgg tgcttctgcg gtattgctgg ctaaagaagg cgcgtacgct caagtccgtc
     2401 tgcgctctgg cgaagttcgt aaaatcaacg taaattgccg tgcgaccatc ggtgaagttg
     2461 gtaacgaaga gcaaagcctg aaaaaaatcg gtaaagccgg tgccaaccgt tggcgcggta
     2521 ttcgtccgac cgtacgcggt gttgtcatga atcctgtcga tcacccgcat ggtggtggtg
     2581 aaggccgtac gggcgaggcc cgcgaaccgg tcagcccatg gggtactcct gctaaaggct
     2641 accgcactcg taataacaaa cgcacggata acatgattgt tcgtcgccgt tactcaaata
     2701 aaggttaatt tagtatggct cgttcattga aaaaaggccc atatgtagac ctgcatttgc
     2761 tgaaaaaagt agatgctgct cgcgcaagca acgacaaacg cccgattaaa acctggtctc
     2821 gtcgttctac cattctgcct gattttatcg gtctgaccat tgctgtgcac aacggccgca
     2881 cccatgtgcc tgtgtttatc agcgacaata tggttggtca taaattaggc gaattctcat
     2941 tgacccgtac ctttaaaggc cacttggccg ataaaaaggc taaaaagaaa taaggtgaat
     3001 catgagagta aatgcacaac ataaaaatgc ccgtatctct gctcaaaagg ctcgtttggt
     3061 agctgatttg attcgtggta aagacgttgc ccaagctttg aatattttgg ctttcagtcc
     3121 taaaaaaggt gccgagctga ttaaaaaagt attggagtca gctattgcta atgccgagca
     3181 caataacggt gcggacattg atgaactgaa agtggtaact atctttgttg acaaaggccc
     3241 aagcttgaaa cgttttcaag ctcgcgccaa aggtcgcggt aaccgcatcg aaaaacaaac
     3301 ttgtcatatc aatgtgacag tgggtaacta aggaaaagct atgggacaaa agattaaccc
     3361 tacaggcttt cgcctggcgg taactaaaga ctgggcttca aaatggtttg ctaaaagcac
     3421 cgacttttct actgttttga agcaggatat cgatgttcgc aattatttgc gtcaaaaatt
     3481 ggccaatgct tcggttggtc gagtggttat tgaacgccct gcaaaatctg cacgcattac
     3541 cattcactcc gctcgtccgg gtgtggttat cggtaaaaaa ggtgaggata tcgaggtttt
     3601 gaaacgtgac ttgcaagtct tgatgggtgt acctgttcat gtaaatattg aagagattcg
     3661 ccgtcctgag ttggatgctc aaattattgc tgacggtatt gcccagcagt tggaaaagcg
     3721 cgttcaattc cgtcgtgcta tgaaacgagc aatgcaaaat gcaatgcgtt ctggtgctaa
     3781 aggcattaag attatgactt caggccgtct gaatggtgcg gatattgccc gtagcgaatg
     3841 gtatcgtgaa ggtcgtgtgc cactgcatac tttacgtgca aatgtagatt atgcaaccag
     3901 cgaagcgcac accacatatg gtgtattggg tctgaaagtt tgggtttata cggaaggcaa
     3961 tattaaatct tccaaacctg aacatgagag taaacaaaga aaggcaggta gacgtaatgc
     4021 tgcagccaac tagactgaaa taccgtaagc aacaaaaggg tcgcaatact ggcatcgcta
     4081 ctcgcggtaa taaggtaagt ttcggtgagt tcggcttgaa agccgtaggt cgtggtcgtt
     4141 tgactgcccg tcaaatcgaa gctgctcgtc gtgcaatgac ccgtcatatc aaacgtggtg
     4201 gtcgtatttg gattcgtgta ttccctgata aaccgattac tgaaaagcct attcaagttc
     4261 gtatgggtgg cggtaaaggt aacgtggaat attacattgc cgaaattaaa ccaggtaaag
     4321 tgttgtatga aatggatggc gttccagagg aactggctcg tgaagcattc gagttggctg
     4381 ctgccaaatt gcctattcct acaacctttg tagtaagaca ggtgggtcaa taatgaaagc
     4441 aaatgaattg aaagacaaat ccgttgagca gttgaatgca gatttgttgg acttgttgaa
     4501 agctcagttt ggcttacgta tgcaaaacgc taccggtcaa ttaggcaaac caagtgaatt
     4561 gaaacgtgta cgtcgcgata ttgctcgtat taaaaccgtt ttaactgaaa aaggtgctaa
     4621 gtaatgagcg aaactaaaaa tgttcgtact ttgcaaggca aagtagtaag cgacaaaatg
     4681 gataaaaccg taacagtatt ggttgagcgt aaagtaaaac atccgctgta tggtaagatt
     4741 attcggttat ctactaaaat ccatgcccat gatgaaaata atcaatatgg aattggtgat
     4801 gtggttgtta tatcggaatc ccgtccattg tcaaaaacta aatcttgggt tgtcagtgag
     4861 ctggttgaga aagcacgttc tatttaagaa ttaaagcaac gtgcttggaa tgggaaacga
     4921 agtattgcag caaatttaat ttgcgtgtaa acttcgtttc ctgtctttca gtttcttctg
     4981 gaagtttctt ccctttcggg gtccaagact ggtttacttg aaccgcaagg tttcatttaa
     5041 taagcagcgg ctttgctgta agttatctga aagtggtaaa ttaagttggt taatttaaag
     5101 gtaataacat gattcaaatg cagaccatct tagatgtggc tgataactct ggtgcgcgtc
     5161 gcgtaatgtg tatcaaggta ttgggcggat ctaagcgtcg ctacgcttct gttggcgata
     5221 ttattaaagt ggcagttaaa gatgcggctc cgcgtggccg tgtcaaaaaa ggcgatgtat
     5281 ataatgcggt agttgttcgt actgctaagg gtgtacgtcg tcctgatggt gcgttaatta
     5341 aattcgataa caatgccgcc gtgttactga ataataaact tgaacctttg ggtactcgta
     5401 tctttggtcc ggtaacccgt gaattgcgta ctgagcgatt tatgaaaatc gtttcattgg
     5461 cacctgaagt attataagga atggcacgat gaataaaatc attaaaggcg atagggttgt
     5521 agtaattgct ggtaaggata aaggtaagca gggtcaagta gttcgagtgt tgggtgataa
     5581 agttgttgtt gagggcgtta atgttgtaaa acgccatcaa aaacctaatc caatgcgtgg
     5641 cattgagggc ggtattatta ctaaagaaat gcctttggat atttctaata tcgcaatcct
     5701 gaatccggaa actaataaag cggaccgtgt tggtattaag ctgattgaaa atgaaggcaa
     5761 agttaaacgc gttcgtttct tcaaatcaaa tggctctatc attggggcat aaggagataa
     5821 catggctcgg ttgagagagt tttataaaga gacagttgtt cctgaattgg ttaaacaatt
     5881 tggttacaaa tcagtaatgg aagtcccgcg tattgaaaaa atcaccttga atatgggtgt
     5941 gggtgaggct gttgctgaca aaaaagttat ggaacatgct gtttccgatt tagagaaaat
     6001 tgccggtcaa aaaccggttg ttactgttgc ccgtaaatct atcgcaggtt ttaaaatccg
     6061 tgataactat ccggttggtt gcaaagtaac attgcgtcgt gatcaaatgt ttgaattctt
     6121 ggatcgtttg attactattg cattacctcg cgtacgtgac ttccgtggtg tgagcggtaa
     6181 atcatttgat ggccgtggca attacaatat gggtgttcgt gagcaaatta tttttccgga
     6241 aattgaatac gataaaattg atgctttgcg tggtttgaat attactatta ctactacagc
     6301 aaaaaccgat gaggaagcga aagctttatt gtcattgttt aaatttccgt tcaaaggata
     6361 atcatggcta agaaagcact tattaatcgt aatctgaaac gtcaagcttt ggctaaaaaa
     6421 tatgcggcta aacgcgcggc aattaaagcg gtaatcaatg attcgaatgc aactgaggaa
     6481 gagcgttttg aggctcgttt gaggtttcaa tccattcctc gtaatgcggc acctgtgcgt
     6541 caacgtcgtc gttgtgcttt gacaggtcgc cctcgtggta ctttccgtaa atttggtttg
     6601 ggtcgtatta aaatccgtga aatcgccatg cgtggcgaaa ttccgggtgt tgttaaagcc
     6661 agctggtaat aggagtaatt aagaatgagt atgcatgatc ctatttccga tatgttgact
     6721 cgtatccgca atgcgcaacg tgctaataaa gcagcggttg caatgccttc ttcaaaatta
     6781 aagtgtgcta ttgcaaaggt attgaaagaa gaaggatata ttgaggactt cgcagtttca
     6841 tctgacgtaa agtctatatt ggaaattcaa ttaaaatact atgcagatcg tcctgtaatt
     6901 gaacaaatca agcgtgtatc tcgccccggt ttgcgtattt ataaagcgtc tagtgagatt
     6961 ccaagtgtta tgaatggctt gggtattgct attgttagta cttctaaagg tgtaatgact
     7021 gatcgtaaag cacgttctca aggtgttggt ggtgagttgt tatgcattgt agcctagtgg
     7081 aggaaaagaa atgtcacgtg tcgcaaaaaa cccagtgact gttcccgctg gtgtagaagt
     7141 aaaatttgga acagaggcat tagttattaa gggtaagaac ggtgaattgt cttttccttt
     7201 gcattctgat gtagccattg aatttaatga tggcaaattg gcttttgttg cgaataacag
     7261 cagtaaacaa gcaaatgcaa tgtctggtac tgctcgcgca ttagtcagca atatggttaa
     7321 aggtgtttca gaaggttttg agaaaagatt gcaattgata ggtgtgggtt atcgtgctca
     7381 agcacaaggt aaaatcttga atctgtcttt gggtttttct catccgatcg tatatgaaat
     7441 gcctgaaggt gtctccgttc aaactcctag ccaaacagag attgttttaa ccggctcgga
     7501 taaacaagtt gttggtcaag ttgctgctga gattcgtgcg ttccgtgctc ctgagcctta
     7561 taaaggtaaa ggtgttcgct atgtaggaga agtagtggta atgaaagaag ccaagaaaaa
     7621 ataattgagg ttcactaatg gataaacata caacccgact ccgtcgtgca cgcaaaaccc
     7681 gtgctcgtat tgcggacttg aaaatggtaa gattatgtgt gttccgaagc aataatcata
     7741 tttatgctca agtaattagt gctgaaggtg ataaagtatt ggctcaagcc tctacattgg
     7801 aagctgaggt gcgcggtagt ctgaaatctg gaagcaatgt tgaagcagct gcaatagttg
     7861 gtaaacgtat cgctgagaag gctaaagcag caggtgtaga aaaggttgct tttgatcgtt
     7921 caggtttcca atatcacggt cgtgtgaagg ctttggctga agctgctcgt gaaaatggtt
     7981 taagcttcta aatatttgga gactttcaga tggcaaaaca tgaaattgaa gaacgcggtg
     8041 acggtctgat tgaaaagatg gtcgcagtta accgtgtaac caaagtagtt aaaggtggtc
     8101 gcattatggc tttctctgcg ctaactgttg ttggtgatgg agatggtcgt attggtatgg
     8161 gtaaaggtaa gtcaaaagaa gtgcctgttg cagtccaaaa ggcgatggat caagcacgac
     8221 gctctatgat taaggtacca ttaaaaaatg gtacgattca tcatgaggtt attggtcgac
     8281 atggtgctac taaagtattt atgcagcctg ctaaagaggg tagtggcgta aaagccggtg
     8341 gacctatgcg tttggttttt gatgctatgg gcattcataa tatctccgcc aaagtgcacg
     8401 gatctactaa cccatataat atcgtacgtg caacattaga tggtttgtct aagttgcata
     8461 ctcctgctga tatcgcagcc aaacgtggct tgacagtgga agacattttg ggagttaacc
     8521 atggctgaac aaaaaaagat tagggttaca ttggttaaaa gcctgattgg tacaattgaa
     8581 tctcatcgtg catgtgcacg cggtttaggt ttgcgtcgtc gcgagcatac ggtagaggtt
     8641 ttagataccc ctgaaaaccg tggtatgatt aataaaatca gctacttgtt gaaagtggag
     8701 tcttgatatg tttttgaata caattcaacc tgctgttggt gctacgcatg ctggtcgtcg
     8761 tgttggacgc ggtattggta gtggtcttgg caaaacgggt ggtcgtggtc ataaaggtca
     8821 aaagagccgg tctggtgggt ttcataaggt gggtttcgag ggtggtcaaa tgcccttgca
     8881 acgacgcctc cctaaaagag gttttaaatc tttaacagca tcagctaatg cacagcttcg
     8941 tttaagtgaa ctggaatcaa ttgctgttaa tgagattgat attttggtct taaagcaagc
     9001 gggtctgatt gcatctacag tctctaatgt taaagttatt gcttctggtg aaatttctaa
     9061 ggcagttgct ttgaagggta ttaaagttac caaaggtgcg agagctgcta tcgaggctgt
     9121 tggtggtaag attgaaatgt aaggtttaat attgtggcta atcaacaaac gtcatcaggt
     9181 tcatccaaat ttggagatct taagaaacgt cttttgtttc tatttggagc attgattgtt
     9241 tttcgaattg gtgcccatat acccgtacct ggagttgatg ctgttgcttt agctaaatta
     9301 tacgaaagcg ctggaaacgg catcctggga atattgaata tgttttccgg tgggtcgtta
     9361 gagcgcttta gtatatttgc aataggaatt atgccatata tttcagcttc tattattgta
     9421 cagctcgctt ctgaaatttt gccatcattg aaggctttaa aaaaagaagg ggaggctggt
     9481 agaaaggtaa ttacgaaata tactaggtat ggtactgttt tgttagcaat tcttcaaagt
     9541 ctaggtgttg catctttcgt atttcagcaa ggaattgttg taacaagttc atttgagttt
     9601 catgtttcca cggtagtttc tttggtaacg ggaaccatgt ttcttatgtg gcttggggag
     9661 caaattactg aaaggggtat cgggaacggt atttctttaa tcattacggc aggtattgct
     9721 tcaggtattc cttcgggtat tgcaaagctg gttacactga cgaaccaagg ttctatgagc
     9781 atgcttacgg cgttgtttat tgtatttggt gccttattat taatttattt ggttgtatac
     9841 tttgaaagtg cacagcggaa gattcctatt cattatgcaa aacgccagtt taatggtagg
     9901 gcgggtagtc aaaatacgca tatgcctttc aagttgaata tggctggtgt tattccccca
     9961 atttttgctt ccagtattat tctatttcca tctactcttt taggttggtt tggttcggct
    10021 gatacaaata gtgttttgca caaaatagct ggattgttac aacacggtca attgctgtat
    10081 atggctttat ttgcagcgac agttattttc ttttgttatt tttatacggc tttggttttt
    10141 agccctaaag aaatggcaga gaatttaaaa aagagtggtg cttttgttcc tgggattaga
    10201 cctggtgagc agacctctag gtatttagaa aaagttgtat tacgtttgac attgtttgga
    10261 gctctttata ttacaactat ttgtttaatt ccagagttct taactacggt tttaaatgta
    10321 cctttttatt tgggtggcac gtctttgttg attctagttg ttgtaacgat ggattttagt
    10381 acacaaataa attcgtatag gcttactcaa cagtatgata agttaatgac tcgttcagaa
    10441 atgaaatcat tttctcggaa atagaattat ggcgaaagaa gatactatcc aaatgcaagg
    10501 tgaaattctt gaaactttac ctaatgcaac atttaaagta aaacttgaga atgaccatat
    10561 tgtattgggt catatttctg ggaagatgcg gatgcattac attcgtattt ctccgggaga
    10621 taaggtcaca gtagagctga caccttatga tctaactagg gctcgaatcg ttttcagagc
    10681 aagataaacc aataaaagga aaataaaatg cgtgtacaac catctgttaa gaaaatttgc
    10741 cgaaattgca agattattcg tcgaaatcgt gtagttcgtg taatttgtac tgatctccgt
    10801 cacaaacagc gtcaaggtta atggaatatt tcttttaatg tgattctgtg atatagtgac
    10861 acactttgcc ctaaaaagga aaaaatatgg ctcgtattgc aggggtaaat atccctaata
    10921 acgcacacat cgtaattggt cttcaggcta tttacggtat tggtgctact cgtgctaaat
    10981 tgatttgtga ggctgcaaat attgcgcctg atactaaagc aaaagatttg gacgagactc
    11041 aattagatgc tttgcgtgac caagttgcca agtatgaagt agaaggtgat ttgcgtcgtg
    11101 aggtaactat gagtatcaag cgattgatgg acatgggctg ctatcgtggc ttccgtcatc
    11161 gtcgcggctt accatgccgc ggtcaacgca ctcgtacaaa tgcgcgtacc cgcaaaggtc
    11221 cgcgtaaagc gattgctggt aagaaataaa ttttaaggaa ttttattaat ggctaaagca
    11281 aacacagctt cacgtgtacg taaaaaagta cgtaaaaccg tgagtgaggg tattgtgcac
    11341 gttcatgcat ctttcaacaa taccatcatt acaatcactg accgtcaagg caatgcgttg
    11401 tcttgggcta cctctggcgg cgctggtttt aaaggttctc gtaaaagtac accatttgca
    11461 gcacaagttg cagcagaagc agctggtaaa gttgcccaag agtatggcgt taaaaattta
    11521 gaggttcgta ttaaaggtcc aggtccaggt cgtgaatcct ctgtacgtgc tttgaatgct
    11581 cttggtttca agattaccag cattactgac gttaccccgt tgcctcataa cggttgccgt
    11641 ccgcctaaaa aacgtcgtat ttaatattgg agtgatttga aacatggcac gttatattgg
    11701 ccctaaatgt aagttggcac gtcgcgaagg tacggatttg tttttgaaga gtgcgcgccg
    11761 ctctttggat tctaaatgta aaattgattc cgctcccggt cagcatggtg caaaaaaacc
    11821 gcgtttgtca gactatggtt tgcagttgcg tgaaaaacaa aaaatccgcc gtatttatgg
    11881 cgtattagaa cgtcagttcc gtcgttattt cgcagaagct gatcgtcgta aaggttctac
    11941 cggcgagttg ctgttgcagt tgctggaatc tcgtttggat aatgtcgttt atcgtatggg
    12001 tttcggttct acccgagctg aagcaagaca gcttgtttct cataaggcga tagttgtgaa
    12061 tggacaagtt gtcaatattc cttctttcca agtgaaagct ggtgatgttg tctcagttcg
    12121 tgaaaaagcc aaaaaacagg tacgtattca agaagcattg ggtttggcaa ctcaaatcgg
    12181 cttgccgggt tgggtttctg tagatgcgga taaacttgag ggtgtgttca aaaacatgcc
    12241 ggatcgctcg gaattgaccg gtgatattaa tgaacagctg gtggtagagt tctactctaa
    12301 ataatgctag ctcagtgagg gacagttaaa tgcagaatag cacaaccgaa tttttgaaac
    12361 ctcgtcaaat tgatgtaaat actttttctg caactcgtgc aaaagtatct atgcagccat
    12421 ttgaacgtgg tttcggtcat accttaggta atgctttgcg ccgtatctta ctgtcatcca
    12481 tgaatggttt tgctcctact gaagtagcta ttgccggtgt attacacgaa tattctactg
    12541 ttgatggtat tcaggaagat gttgttgaca ttttgctgaa tattaaaggt attgtgttta
    12601 aactccatgg tcgtagccaa gttcaacttg tgttgaagaa atcaggttca ggtgtcgtat
    12661 ctgccggtga tattgagttg ccgcatgatg tagaaattct gaatcctggt catgtcattt
    12721 gtcatttggc tgataacggt caaattgaga tggaaattaa agtagagcaa ggtcgtggtt
    12781 atcaatctgt ttcaggtcgt caggtagttc gtgatgagaa ccgtcagatt ggtgcaatcc
    12841 agttggatgc gagcttttcg cccatcagcc gtgttagctt tgaggttgaa cctgcacgtg
    12901 tagagcagcg gacggatctt gataagttgg ttttggatat cgaaaccgac ggttctattg
    12961 atcctgagga agctgtacgc agtgcggcac gtattttgat tgatcagatg tctatttttg
    13021 ctgatttgca gggtacgcct gtggaggagg ttgaagaaaa agcacctcct atcgaccctg
    13081 ttcttttgcg tccggtggat gatctggaat tgacagtacg ttcagctaat tgtttgaaag
    13141 ctgaggatat ttattatatt ggcgatttga ttcaacgcac tgaaaccgag cttcttaaaa
    13201 cgccgaattt gggacgtaaa tctttgaatg agattaagga agtattggca tctaaaggtt
    13261 tgacactggg ttctaagttg gaagcatggc cacctgtagg cttggaaaag ccttaatgaa
    13321 gaattaaagg ataattgata tgcgtcatcg taatggcaat cgcaaattaa accgtaccag
    13381 cagtcatcgt gctgcaatgc tgcgtaatat ggcgaattca ttattgactc acgaaactat
    13441 tgtaacaact ctgcctaagg ccaaggaatt gcgccgtgta gtagagccgt tgattacatt
    13501 gggtaaaaag ccgtcattgg caaaccgccg tttggcattt gaccgtactc gcgaccgtga
    13561 tgttgtagta aaactgtttg gcgatttggg tcctcgtttt actgctcgta acggtggtta
    13621 tgttcgggtg ttgaaatacg gattccgtaa aggtgataat gcacctctgg cactggttga
    13681 attggttgac aaaccggctg ctgagtaatt ttagtcatat aacgccatct gccgaaaagc
    13741 aggtggcgtt atttttgcaa tatctgatag gtaatagggt attggctatc atgtttaaaa
    13801 tattaattga atagctaagg tttgcgcggt aaacttacat cattaaaaaa ttctatgatg
    13861 gtttatataa tgaatgcctt cgatataaag tcgacaaaga tggacgtatt gtctatatct
    13921 ttgcatacat cagacttgtt tgatttggaa gatgtgctgg tcaaattggg caagaagttt
    13981 caagagtctg gtgttgttcc atttgttctg gatgttcaag agtttgatta tcccgagtct
    14041 ttggatcttg ctgcattggt ttcgttgttt tcaaggcatg gtatgcaaat tttgggtctg
    14101 aagcattctg atgaacgttg ggctgctgcg gctatgaagt atcatttgct gttttgtctg
    14161 tctcattcgg aaaatgttaa agaactgggt caggttgagg tgcagaaaac ggaggatggt
    14221 cagaaagcaa ggaaaacagt attgattaca tcccctgtcc gtaccggtca gcaggtttat
    14281 gccgaagatg gcgatttgat tgttacgggg gcggtcagcc agggggcaga attgattgcg
    14341 gatggcaata tacatattta tgcgccgatg agggggcgtg ctttggccgg cgccaagggt
    14401 gatacttctg cccgcatatt tatccactcc atgcaggcag aactggtttc tgtggcgggt
    14461 atttaccgta attttgaaca ggatttgccg gaccatctgc acaagcagcc ggtacagata
    14521 ttgttgcagg ataaccgatt ggttatcagt gcaattggct cagagtaatt gtttgatatt
    14581 ttaaaaagga aatattgtgg caaaaattat tgtagtaact tcaggtaagg gcggtgtcgg
    14641 taaaacgact accagtgcca gtattgcgac aggtttggca ttacgcggat ataaaactgc
    14701 ggtaattgat tttgatgtgg gtttgcgtaa cctcgacctc attatgggtt gcgagcgtcg
    14761 tgtcgtttat gacctgatca atgtcattca gggggaggcg acgctcaacc aggctttgat
    14821 taaagataaa aattgtgaaa acctgtttat tttgccggct tcccagactc gggataaaga
    14881 cgctttgaca cgcgagggcg tagaaaaagt gatgcaggag ctgtccggca agaaaatggg
    14941 ctttgagtat attatttgcg actctcctgc cggtattgag cagggtgcat tgatggcgtt
    15001 gtattttgct gatgaagcca ttgtaacgac caatcccgag gtttccagtg tgcgtgactc
    15061 cgacaggatt ttgggaattt tgcaaagcaa atcccataag gcagagcaag gcggttcggt
    15121 taaagaacat ctgttgatta cgcgttattc tcccgaacgt gtggcaaaag gcgaaatgct
    15181 gtctgtacag gatatttgcg atattctgca tattcctttg ctgggtgtga ttcccgaatc
    15241 ccaaaacgtc ttgcaggcat ccaattccgg agaaccggtc atccatcagg acagcgtggc
    15301 ggcttccgag gcatataagg acgttattgc ccgtcttttg ggcgagaacc gtgaaatgcg
    15361 tttcttggaa gctgagaaaa aaagcttctt caaacgtctg ttcggaggat gaggtatgtc
    15421 attaatcgaa cttttattcg gcagaaagca gaaaacggca accgttgccc gcgaccgcct
    15481 tcaaatcatc attgcccaag agcgcgccca agaaggtcag gctccggatt acctgccgac
    15541 tttacgtaaa gagttgatgg aagtcctgtc caaatatgtg gatgtttcat tagacaatat
    15601 ccgtatttcc caggaaaaac aggatggtat ggatgtgctt gagttgaaca ttactttgcc
    15661 ggaacagaaa aaggtatagg acatgacctt aaccgaattg cggtacatcg tcgcagtcgc
    15721 ccaagaacgt catttcggca gggcggcgcg gcgttgtttt gtcagccagc ccactttgtc
    15781 tattgccatt aagaaattgg aagaagagct tgccgtctct ttgtttgacc ggagcagcaa
    15841 cgatattatt acgaccgagg cgggggaacg tatcgttgca caggcgcgta aggtgttgga
    15901 agaggcagag cttatcaggc atttggcaaa tgaagaacaa aacgagctgg agggtgcgtt
    15961 caaactcggg ctgattttta cggttgcgcc gtacctgctg ccgaaactga ttgtctcgtt
    16021 gcgccgtact gcaccgaaaa tgcctttgat gttggaagag aattacacgc atactttgac
    16081 cgagtcgctc aaacgcgggg acgttgacgc gattatcgtt gccgaaccgt ttcaagagcc
    16141 gggcattgtt accgaaccct tgtatgacga accgtttttc gtgattgtcc cgaaagggca
    16201 ttcatttgag gaactggatg ccgtttcgcc acggatgctg ggtgaggagc aggttttgct
    16261 gctgacggaa ggcaactgta tgcgggatca ggtactctca agctgttccg aattggcggc
    16321 gaaacaacgc atacaggggt tgaccaatac attgcagggc agctcgatca atacaatccg
    16381 ccatatggtc gccagcggtt tggcaatcag cgtgttaccg gcaaccgcgc tgaccgaaaa
    16441 cgatcatatg ctgttcagca ttattccgtt tgaaggtacg ccgccaagcc ggcgggtcgt
    16501 attggcgtac cgccgcaatt ttgtccgtcc gaaggcgttg tcggcgatga aggcggcgat
    16561 tatgcagtcg cagcttcacg gggtaagttt tatccgcgac taggcgcagg cattgttttc
    16621 aaaacgccat ttccctgagc cgacaacacg gtatgccaag atattgccgt catcatcgat
    16681 tttgagtata gcatcgccac ggaaactgcc gtcctgaaga tattcgactt ttgcatcact
    16741 gtgaatgttt tcatcagtgc cgatgcaatg ccatgtatag tggattaaca aaaaccagta
    16801 cggcgttgcc tcaccttgcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg
    16861 atttttgtta atccactata aaagaggccg tctgaaaaac atttttcaga cggccttgtt
    16921 gattcaatca aatcagtctt tcaacttcga caactgagtt tgcacttttg ccattttgtc
    16981 ttccaattcc gccaaatcgg ctttgtcttt ttccaccaaa tgcgccgggg ctttttcggt
    17041 gtagccgggt ttggagagtt tggcgttgag tttgtccaag gctttttgca gcttctcggc
    17101 ttctttgctc aaacgggcgg tttcggcagc tttgtcgatt tcgactttca acatcaggcg
    17161 cgcgccgttg cagacggcga cgggcgcgtc ttcgctttcg ggtagggcgg cgacttgctg
    17221 tgcttcggtc aggcgggtca tcatcggcag gtatttgagg tagtccgcca agtcgtctgc
    17281 gctttcgaca aacagcgggg ctttcacgtt gggctggatg cccatttcgc cgcgcaggtt
    17341 gcggactgcg ccgatcaaat cctgcaacac ggtcatttgc ccgaatgccg tctgaacaat
    17401 ctcgccgccg tcggcttcgg ggaagcgggc gagcatgatg ctgtcggcgg ttttcgcgtc
    17461 gcacataggg gcgacggttt gccacagttc ttcggtgatg aacgggataa tcgggtgcag
    17521 caggcgcagg gcggcttcga gtacgcgcaa taaggtatgg cgtgtggcgc gttggcggct
    17581 ggcgcagccg gtttgaagct gcactttggc aagttccaaa taccagtcgc aatagtcgtt
    17641 ccacacgaag ctgtacaggg tttccgccgc caaatcaaag cggtaggttt cgtaggcttg
    17701 cgtaacctgc tcgatggtct gattcagacg gcctacaatc cacatatcgg ggaaggaata
    17761 gccgcgcggt tcggtggcgg ttgcgccgta gccgcagtct tggttttcgg tgttcatcaa
    17821 gacgaagttg gtggcgttcc agattttgtt gcagaagttg cggtagcctt cggcgcgttt
    17881 gaagtcgaag ttcacgctgc gccccaagct ggcgtagctc gccatggtga aacgcaatgc
    17941 gtccgcgccc atactcggaa tgccttcggg aaagagtttt ttggtggctt cttccacttt
    18001 cggcgcggtt tcgggtttgc gcagaccggt ggtacgtttc accagcagtt tttccaagtc
    18061 gatgccgtcg atcaaatcca cagggtcaat gacgttgcct tcggatttgg acattttttt
    18121 gccttcgtgg tcgcgcacga tgccgtggat gtacacgtct ttaaacggta ctttgccggt
    18181 aaagtgggtg gtcatcataa tcatgcgcgc cacccagaag aagatgattt cgtagccggt
    18241 gaccaagacg ttggacggca ggaaggcttt gagttcgtcg gtttcagacg gccagccgag
    18301 cgtggagaac ggcacgagtg cggaggagaa ccatgtgtcc aatacgtctt cttctcgggt
    18361 caagcctgtt ttgccggctt gtttttcggc ttcttcctga ttgcgggcaa cgtacacatt
    18421 gccttcgttg tcgtaccatg cagggatttg atgcccccac cacagttggc gcgagatgca
    18481 ccagtcttgg atgttgttca tccattggtt gtaggtgttg acccagtttt cggggataaa
    18541 gcgcaccgcg ccgctgtcga cggctttttt ggctttgtca gcaaggctta agcctttgaa
    18601 ttcgctgtca ggctcgccgc cgtttggcgt ggcggacatg gcgacaaacc attggctggt
    18661 cagcatcggc tcaatcacgg aaccggtacg gtcgcctttc ggcgtcatca gcgtgtgcgc
    18721 tttgatttcg accaagaaac cttgttcctg caaatcggca accatttgtt tgcgcgcggc
    18781 aaagcggtcc aagcctgcgt atttttcagg cagggcaaag cttggttgcg cttcgccttt
    18841 gaagttgaac acttcggcgt ttgccaatac tttggcttcc aagtcgaaca cattaaccaa
    18901 gcgcgtatcg tggcgtttgc cgacttcgta gtcgttgaag tcgtgcgcag gcgtgatttt
    18961 cacgcagccg gtgccgaagt ctttttcaac gtattcgtcg gcaatcacgg gaatggtgcg
    19021 gccggtcagc ggcaggatta attctttgcc gattaagtgg gtataacgtt cgtcttcggg
    19081 attgacggca acggcaacgt cgcccaacag cgtttcggga cgggtggtgg cgacgatgac
    19141 ggcttcggca ggattgtccg ccagcggata gcggatgtgc cacatagagc cttgttcttc
    19201 cacgctttcc acttccaaat cagacactgc ggtacccaat accggatccc agttcaccaa
    19261 gcgtttgccg cgataaatca agccctgttc atacaggcgt acgaacactt cggttacggt
    19321 ttcggcgcgt acatcgtcca ttgtgaaata ctcgcgcgtc cagtcggcag aacagcccac
    19381 acggcgcatc tgctgcgtaa tcgtgccgcc ggaaacttct ttccattccc acactttttc
    19441 caagaatttt tcacgaccca agtcatgacg ggacacgttt tgcgcggcaa gctgacgctc
    19501 gaccacgatt tgcgtggcga tgcccgcgtg gtcggtgccg ggaatccagg cggtgttgca
    19561 gcctttcatg cggtagtagc gggtcagacc gtccataatg gtttggttga aggtatggcc
    19621 catgtgcagc gtgccggtta cgttgggcgg cggcagttgg atggaaaaag acggtttggt
    19681 caaatccata tcgggctgga aataaccttg gctttcccag ttttgatagt gtttggattc
    19741 gatttcggcg ggggagtatt tgtctaacat gatggaactt tgtgaaatta aggttatttt
    19801 tgatgtgcgg attataacgc aaaaaggccg tctgaatcat ttcagacggc ctttggcata
    19861 cgggttttaa aaatggaaca ataccaggct gacggcaatc accgccatac ccgttgtcag
    19921 gccgtaaacg gtttcatggc cgtctgaata gcgtttggcg gccggcagca gctcgtccaa
    19981 cgccaaaaac accatcacac cggctatcac gccgaatacc gaaccaaaca cggcaggcga
    20041 caaaaacggc tgcaaaacca aatagcccaa agccgccccc aacggctcgg ccaagccgga
    20101 tagcagacac gcccacaccg ttttcttacg gctgcgggtg gcaaaataaa ccggcgcggc
    20161 gatggaaatg ccctccggaa tattatggat ggcaatcgcc aaggccaaag gcatcccgac
    20221 cgccggattt tccaatgtgg caaaaaacgt cgccaagcct tcggggaaat tgtgcgcagt
    20281 aatcgcaaac gccgccatca tgccgactcg cgcgatatgg cggcgtttgc tttcttgaaa
    20341 cgacgggtct tgcgcgtcta aagtttcatg cgggttcggc accagacggt caatcagcgc
    20401 aatgccgccc atcccggcca aaaatgccat ggtcgccgcc gcaaacgcgt ggtctttatc
    20461 ataaatttca gcgaacgcct cgctggactt actgaaaatc tccgtcaggg aaacatacac
    20521 cattgcaccg ccggcaaatg ccaaaccaaa cgacaacaca cgcggattgg gcgttttgga
    20581 aaacattacc aagccgctgc ctaatacggt aaacaaaccg gcagccaacg tgatggaaaa
    20641 ggcaacggcc aaattggaca tcgaaaaatc gggcatgaga aaacctgcgc taaaagctgg
    20701 gacaggttca gactaacact ttttaatgcg tatgataata gttattattt attttattgg
    20761 ttggatacac ggattttgaa acaaaaggcc gtctgaaaaa tagttttcag acggccttta
    20821 catttgaaat gccactaaac cttatcgctt tccagcttaa gcctgatagc gcgacaggct
    20881 caaatcgtcg ctgcggattt cggtgtcttt gccgctcacg atatcggcgg ttaattttgc
    20941 cgaacccagc gacatggtcc agcctaaagt accgtggccg gtattcagaa acaggttgtc
    21001 aaagtgggtg cgaccgatta acggcgtgct gtcgggcgtc atcggtctga ggccgctcca
    21061 gaacgatgct tggctcaaat cgccgccttc cgggaacaag tcgttgacga ccaaagccaa
    21121 ggtttcgcgg cgtttttcgg gcagtttgat ttcgtagccc gacaattctg ccatgccgcc
    21181 gacgcggatt ctgttgtcaa agcgcgtgat agcgactttg tagctttcat ccaaaacggt
    21241 ggacaccggc gcgccgtctg aattggtgac cggcagggtc aaggaatagc ctttgacggg
    21301 ataaatcggc agatcgaggt ctaactgcgc caacacagtc ctactgaagc agccgagcgc
    21361 acagacaacg gcatctgctt caaaccgccc tgttttggtt tcaacggctt tgatgcgcag
    21421 cccgttatgg tcgatgcggc tgatggtttg gttgaaatga aactgtacgc ccttttcctg
    21481 acacaatttg tataggtttt cggtgaagag gtggcagtcg ccggtcgcat ctgcaggcag
    21541 gtgcaggccg ccggcaattt tggcggtaac gcgtgccagc gcaggctcaa attctgcaca
    21601 ttcttcgggt ttcagacggc ggtacggcac gccgtagcgt tccaaaacgg caatgtcttg
    21661 ttctgccgct tcaacttctt tagcctgacg gaaaatctgc aacgtccctt ttttgcgttc
    21721 ctcaaaattc atgccggttt gcgcttcaaa acggcggaac atttcacggc tatattcgga
    21781 aatcctgacc atgcgctctt tattggtttg atagtgcgct gccgtgcagt tttgcagcat
    21841 ttgccacagc cattcgattt gatacaggct gccgtcgggg cgaaacagca aaggcggatg
    21901 gcttttaaac agccatttca gtgctttggt cggaataccg ggtgcagccc aaggcgtggt
    21961 atagccgtaa gaaagctggc ctgcattggc aaaactggtt tccatcgcca caccctcggc
    22021 gcggtcgatg accgttactt catgtcctgc ctctgccaga taccacgcgg aagacacgcc
    22081 ggcaacaccc gcacctaaaa caagcacttt catgtttctc cctccggctt tttcaaaaca
    22141 gacttaatat gccgtgccgt ctgaatattc ggattcagac ggcctcggat attaatgcgg
    22201 caattcgcca tttgtgattt tttgtttgaa gtcgcgcgtt tcattgacga tgactttcgc
    22261 catcaataaa agtgcaatca ggttgggcaa tgccatcaag ccgttgaatg tgtccgaagc
    22321 cagccacacc aaatcaaggc tcaacacggt acccagcata acggaagaaa cataaccgac
    22381 gcggtacaaa ccggcaaatt tctcgccgaa aacatacacc gcgcattttt cgccgtaata
    22441 gcaccagccg agaatggttg agtaggcaaa gaaaatcagg ccgatggtaa caatccagcc
    22501 gccgatgccg ggcagcattt tttggaatgt gacggttgtc agtgccgcgc cgctcacttc
    22561 aggtttgaca aactcgccgc ccgcgccgag cagtcccatt accaacacga tgccggtaat
    22621 cgagcaaacg acgatggtat ccaaaaacgt accggtcata gaaaccaagg cctgacggac
    22681 gggatggtcg gttttcgcgg ctgcggcggc aataggcgca gaacccatac ccgcctcatt
    22741 ggagaacacg ccgcgcgcca cgccgtagcg gatgaccgta ccgatagcgc cgcccgccac
    22801 tgcctgcgcg ctgaacgcat cggagaaaat cagcttgacg gcaggcatca gtgcatcgga
    22861 attaatcgcg ataatggaaa gaccgcccaa cacataaaac accgccatag caggcacgat
    22921 gaaagaagcg gctttggcga tgcctttaat accacctaaa acgacaacgg cagtcagaac
    22981 ggtcaacgta atgccggtat aggcaggttc gataccgaag ctggtttgca ccgcctgtgc
    23041 aaccgagttg gactgcaccg agctgccgat accgaaggaa gcgaatgtgc cgaacagcgc
    23101 aaatgcaacg gccatccatt tccagttttt gcccaagcct ttttcgatgt aatacatcgg
    23161 gccgccggac atttcgcctt tggaattgtt gacgcggtat ttcaccgcca acacgccctc
    23221 gccgtatttg gtggccatac cgaaaatggc ggttatccac atccaaaata ccgcgcccgg
    23281 gccgccggtt accaccgcag tcgccacgcc ggcgatgttg cccgtaccga tggtggcgga
    23341 cagcgcggtc atcaacgccg caaaatggga aatatcgcct tcgtggcctt cgccgccttc
    23401 atacttcttt gacggcacaa acgcctgttt cagcgcatag cccaacatag tgaactgcaa
    23461 gcctttcagc aaaacggtca gcacaatgcc cgtgccgacc agcagcatca acataacaga
    23521 tccccagacc cagccgctga cggtttcgaa aaaggctttg agattgtcta aaaacaattg
    23581 catggctttc tcctttgtct gttttatttt taaaacacca cttttgtagt gtcctataat
    23641 ttcagcacag aatattcaat aagacaatat gttcttttga aaaatacttt tggttttttc
    23701 gccgaaagca ggtcggttca agctgcggaa attgtttgca attctttaaa agcagcggcg
    23761 gaggtcacaa tgaaatgtcc gaatggggat gtggcgggcg gcagaaatca tcaatgctgc
    23821 cgactgccat acttctgaaa tctacaaaat gatgcatcga tcaaacaata taccgcttta
    23881 aaaaaaccga tgccgtctga aacgctttcg gggcttcaga cggcatcaaa aggatacggt
    23941 cagcggatga tgccgcgcgt cgattgtgcg aaaaagtctc ggaatacggc aagctcggct
    24001 tgggtttcgg cgcggcggag gatgtctgcc ttggcctctt caaacggaat gccgcgatgg
    24061 tagagggttt tgtacacgtt tttgacggcg gaaatctgct ctgcggtaaa accgttgcgg
    24121 cgcatgcctt cgctgttgag ccccgccggt tcggcgcggt agcccgatgc cataaagtag
    24181 ggcggcacgt ctttgtgtac gcctgcggca aacgcggtca tggcgtagtc gccgatgcgg
    24241 cagaattgga aaaccagcgt gtagccgccc aaaacgacgt agtcgccgac ggtaacgtgt
    24301 ccggcaagcg aggcgttgtt ggcgaagatg gtgtggttgc cgaccacgca gtcgtgcgcg
    24361 aggtggcagt acgccataat ccagttgtcg tcgccgatac gggtttcgcc gatgccggtt
    24421 accgtgccta aattaaaggt ggtgaattcg cggatggtgt taccgttgcc gataatcagc
    24481 ttggtcggct cgtcgcggta ttttttgtcc tgcggaattt cgccgaggct ggcaaattgg
    24541 aaaatgcggt tgttttcgcc gatgctggtg tggccgttga tgacggcgtg cggaccgatt
    24601 tcggtattcg caccgatttg gacgttgggg ccgataacgg tgtacgcgcc gactttgacg
    24661 ccggagtcga gttcggcttt ggggtcgatg acggcggtcg ggtggatgag ggtcatgttt
    24721 tgaatactcc gctgcttgtt aagacaaata atagaaaatt acagtttgtc gatttcatcg
    24781 cagaccgcaa tcacttgatc gctaaaatgg ctaaatactg aagcagtatc tacatccatg
    24841 taattaagca gttcaaaaat agattggtga atatttctag cgtagttggt atcttttatt
    24901 gcacctttaa aacaaatcgg ctcgtgatgt gccaaacgat tacggaattt gttaatattg
    24961 gaaagttctc gaaaaatcca tttttggtta tattgcacac ttggtgtaga tttgggcttt
    25021 tttggaaaaa ctttcatcaa tactttccct gtaacatcaa attgggcatc tttccctcct
    25081 gcaaacagat accgccaaaa accgaatcct agtcctgcaa ccaattggtt gtggtcaaac
    25141 tttcccccgc tattattttg tattttagat aatgcaacct tgattaattc agcagattct
    25201 ttcgtgccat ttcttaaaaa gcaaccttga tattttaatg cgggattcgt ctgtggctgt
    25261 atgctgttat ataaccagtt tctgtcttta aacgcctgct gaaggcaaat gtcaattttg
    25321 tttcttaaaa caatctcaaa tattgaaaca acatgaaaaa gttctcttga taaagataaa
    25381 ttcaataaat acaattcagc tgccttgtct tccccaacgg catttttata ccgttccatt
    25441 ctgaaatcag aaaaaatact acagcattcc ttataatcca cgctaacacc tgattcttta
    25501 tttttaaatt gacgtttcaa actatatttg atacagttag gtaaaactaa tccccaccgt
    25561 gtccctgggt ttgaataaac ctaaaccggt gggttttctt tttattaggt cgtctgaaac
    25621 tttcagacga cctttttctg aacactcaaa ccacgcgttt ggcacacatg atgatggctt
    25681 cgacggcgac ttgcccgtcc actttggcaa cggcgttgaa tttgccgatg ccgcgccggc
    25741 tggtcagcag ctcgacttca aagacgagtt ggtcgccggg gatgacttgg cgtttgaagc
    25801 gggcttcgtc tatgccggcg aagaagaaga attcgttttc tttgcgcccg ccctcgctca
    25861 aaatcgccaa cgtgccgcac gcctgcgcca tcgcttcgat gatgagtacg ccgggcatca
    25921 cgggcaggtc gggaaagtgg ccttggaact gcggttcgtt tatggttacg tttttgatgg
    25981 cggtcagggt tttcatcggc tcgaaggcgg tgatgcggtc gagctggaga aacggatagc
    26041 ggtgggggat gagtttttgg atgtctttgg cttcgatggg gagttgtacg tccatgttcg
    26101 tcgtattcct tgaataaagt cggtttggtt atttgctgtc ttgaccggca tctgaaagct
    26161 gctgctccag tgttttgagg cgtttgttca tttcgcttaa gcggtggatg taaacggcgt
    26221 tgcgcgccca ttctttatgg gtggacatcg ggaagatgcc ggcgaggtgt ttgccgcttt
    26281 cggtaatgct gtgggtgacg gacgtgccgc cgccgatggt ggttttgtcg gcgatttcga
    26341 tgtgtccgac cgtaccgacc ccgccgccga tgatgcagta gctgcctatg gttacgctgc
    26401 cggagatgcc ggttttggcg gcgatgacgg tgtgcgaacc gattttgcag ttgtgcccga
    26461 tttggacttg gttgtcgatt ttggtgccgt tgccgacggt ggtgtcgctc atcgcgccgc
    26521 ggtcgatgtt ggtgttcgag ccgatttcta cgtcgtcgcc cagcgttacc gcgccggttt
    26581 gcgggatttt gaaccacgaa tcgccggcaa aggcgagtcc gaaaccgtcc gcgccgatga
    26641 ccgcgccgct gtggatttcg acgcgtctgc cgagtgtgca gccgtaataa acgacggcgt
    26701 tgggatgcag gacgacttcg tcgcccagtc tgcaatcgtg ttggacgacg gcgtttgcca
    26761 agatgcggca gccttcgccg agtacggtgt tcgcgccgat gtaggcgttc gcaccgattt
    26821 cgcagcttgc ggggacggtc gcgcccggtt cgacgacggc ggtcggatgg atgccgccgc
    26881 gcgctttgac gacgggtgaa aacaggcgcg cgactttggc gaaatagaga taggggtcgt
    26941 cggcgacaat caggttgcgc ccttcaaatc cgtctgccgc tttggcggaa acgatgaccg
    27001 cgcccgcgct gctgtcgtgg acttcggctt tgtatttcgg attggcaagg aagctgatgt
    27061 gttccgcctg cgcgtctgcg agcgggcgca cggcggtaac ggaaatgtcc tcgccgcgcc
    27121 attcgccgcc gagccgcgcg gtgatttggg acagggtgta ggtggccgga atcatggttt
    27181 tcctgttcgg tatgccgtct gaaagggtca gcgggcgttc atttctttaa tgacgctgtc
    27241 ggtaacgtcg tattgggtgt tgacgtaaat cacgttctgc aaaatgacat cgtaaccttc
    27301 ctgtttggcg attttgacga tgacgcggtt ggcgttttgc tggagggagg caaactcttc
    27361 gttgcggcgg aggttgtagt cttcttcaaa ctgcgcctgt tttttgcgga acgctgcgac
    27421 cagcccgcgc catttttctt cggcttgcac cttttttgcg tttctgagtt tgccttcggc
    27481 aagctgcctt tccaaatcca gaccttcgcg ttgcagtttt tgcaattcgt cctgacgagc
    27541 ggaaaattcg ctgtccagcg ttttttgaat cttgcgcgcc tgcttggatt cgaggtagat
    27601 gcgctcggtg ttgataaagc cgattttttg gaaggtgtcg gcgtgcgcgc ctgcggtgca
    27661 gcacaaaccg atcagagccg cggcaaacgc gcgggtcaaa cgggtcatgg taaaactcct
    27721 tcgaatgttg ccgcgaaatg ccgtctgaag ggcttcagac ggcatttgcg ggattagaac
    27781 gtcgtgccga gttggaattg gaagcgttgg atttcgtctt ccggtttttt cttcagcggg
    27841 taggcgtagc tgaatttcat cgggcctaaa ggcgagagcc aggtaaccgc gccgccggcg
    27901 gaatagcgca attcgttggt aaaggtggat ttatgggtat tgccggcgcc gtaaatgttt
    27961 tgaaccctgc cgccggtcgc ggaactgctg ttgtcgtcgt aggttttgcc gtcccacacg
    28021 ctgcctgcgt cggcaaacag gctcaggcgg acggtgcgcg cgtctttcgc gccaggcatc
    28081 gggaagagca gctcggcgga gacgttggct tttttgttgc cgccgtagct gattttttcg
    28141 ccgtattcgt catacacttt cggaccgagc gtgccgcttt cgtatccgcg caccgaaccc
    28201 aggccgccgc cgtagaagtt ttcaaagaag gggatttctt tggttctgcc gtagccgccc
    28261 gcaatgccga cttcgccgcc gagcatcagc gtgaaggttt tgcttaaggg gaagaaccag
    28321 gtttggttgt gggtggcgga gtagtattgc agtttgctgc cgggcagggc gatttcggcg
    28381 ttcacgcccg tcaggtagcc gcgcgtcggc cataacgcgc tgtcggtttt gttgcgcccc
    28441 cagccgacgg tacctttgta cagccagcct ttgaagctgc cgtctgtgcc gtcggttttg
    28501 ccgtatttct tgataaagtc ggcatagtgt ttgggcgctt tgttgtaggt gttgacggtc
    28561 aggtgttctg ccaccaaacc gaaattcacg cggtcgtatt cggtaacagg cacgctcatg
    28621 cggatgcctg cgcctgccgt ggtggtttta tattgtttga tgctggtcga tgctttgcgc
    28681 gggtcgaagg cttttccgta aacatcgtag cccaggctga ccccgtctgc cgtgaagtac
    28741 gggtcggtaa acgacagcga gccgttgagc gtggttttgc ttcgtgaggc gcgcagggcg
    28801 gccgacttgc ccgtaccgaa caggttgtct tgggaaacgc ctgcggacat gaccaggccg
    28861 gtatcctgta cccagcccgc gcttaagtcg agcgagccgg tggaacgttc ggtcaggctc
    28921 atgttcaaat cgactttgtc gggtgtgccg gcaagcggga cggcatcaaa ctgtacgttg
    28981 tcgaagtagc ccaaaagctc gacgcgctct ttggagcgtt gcagcttgga ggtgtcgtaa
    29041 ggcgcggatt ccatttggcg caattcgcgg cgcacgactt cgtcgcgggt tttgttgttg
    29101 ccggtgatgt ggatttcgtt gacgtagatt ttccggcccg gttcgatgtg caggacgaaa
    29161 tcgacggttt tggtttcggc gtttggcagc ggctgtacgc tgatttcgct gtatgcgtag
    29221 cctgccgagc ccatgcggtt ctgaatctca cccaaaacgg cggtcatctg ctggcgttcg
    29281 taccatttgc cgggcttcat ggtcagcagt ttttccagtt cggctttggg gacttcgttg
    29341 gtgtcgcctt cgatggagac tttgccccaa cggaaacgtc cgccttcgtg gacggtgatt
    29401 ttgatggtct gcttggtttt gtcttcgttg gtttggatgt cggtatcgag gatgcggaaa
    29461 tcgaagtagc cgttgttctg gtagaagtcg gttacttttt ccatgtcttg ggcaaatttc
    29521 tgctcgttga attggttgct tcgtgtcagc catgtccaaa tgccgccttc ggtcagcgac
    29581 atctgccgca tcagtttgcg gtcggaatag acttggttgc cttcaaattc gatgtcggtg
    29641 attttggcgg atttgccctc gtcaatcgtg atgtcgatgt cgacgcggtt gcgggcgagt
    29701 ttggttactt tgggcgtgat ttggatattg agtttgccgc gcccgaggta ttcttctttc
    29761 aggccggcga ctgcctgatt gagtgtcgcc tgattaaagt attgcgactg cgccagcccg
    29821 aacgattcga ggtttttctt aatggcgtcg ttttgcagca tttttgcgcc ggtgatgttg
    29881 agcgagccga tggtggggcg ttcgataacg gtcagcagga gctgcccgtc cgcagtttcg
    29941 acgcgtacgt cgtcaaagaa accggtggcg tacaggcttt tgatgatggc actgccgtgt
    30001 gtgtcgttgt aggtgtcgcc gactttgacg ggcaggtagt tgaatacggt actcggctcg
    30061 gtacgctgca agccttcgac gcggatgtct tggatggtga agtcggcaag tgccaaaggc
    30121 gatatgccca agaccatcag tgcggaagca atctgtttca gtttcattgt cagttccttg
    30181 tggtgcggaa tgcggtttca gacggcattc cgaaacgtaa aatctaaccg agcagccggg
    30241 taacgtcgtt gaagaaggcg accgccatca tcagcatcat gagggcaagc ccgaagcgca
    30301 aaccgatgtt ttggacgcgt tcgcccaaag gtttgccgcg tatccattcg gcagtataaa
    30361 acacgaggtg gccgccgtcc aaaacgggga cgggcagcag gttcagcacg ccgaggctga
    30421 tgctgaccag tgccaaaaat tccaaataac tttgcaagcc gagttcggcg gactgtccgg
    30481 caatgtcggc aatggtcagc ggcccggaaa tatggctgac ggaggcgttg ccgctgatta
    30541 gtttgccgaa aaatttgagg gttgtccacg agtgggaaac ggttttttcc cagcccatgc
    30601 cgaatgcgcg gataacagac ggacggtagc tgcggcggat ttgcgcgtcc cacgccctgt
    30661 ccggctgcgg acggaggccg acgcgcccga tcagggtgtg gtcgggctgt tcgacagtat
    30721 cggggcggat gtcggcggta tgggtttgtc cggcgcgttc gtaggtcagg gtgatttttt
    30781 tgccggggct ttggcgggtc aggtttgccc attcctgcca tgaggcgatg ggtttgccgt
    30841 cggcggcagt cagcctgtcg cccggtttca ggcctgcttt ttcggcgggg ctgccttttt
    30901 ccacgccgcc ggcaacggtt gtgattttaa agggcatcag tccgatgtag ccttggtttt
    30961 ttgcgatttt accggcttcc ggcgtgcctg cggcatcgat ggtgcggacg gtttgcgcgc
    31021 ccgatgccgt ctgaacgccg acggcgactt tgccggcttc gaggttgagg acgatttcgg
    31081 tttgcgcgct gccccaatct gcaacgggtg tgccgttgac ggattgtatt ttgtcgccgc
    31141 tttggaagcc ggcgcgggcg gcaatggtgt cgggttcgac tgtgccgaca taggggcgca
    31201 gttcggttac gccgaaggaa aagctcagtc cgtacagcaa aaccgccagt gcgagattgg
    31261 tcagcgggcc ggcggcgacg atggcgatgc gtttggcggg gtgttgtttg tcaaaagcgt
    31321 agggtaaatc ggcttctgat acttcgcctt cgcgcgtatc gaccattttg acgtaaccgc
    31381 ccaacggaat cggggcgagg caccattcgg tgtcgccgcg ctttcgggtg aaaaacggtt
    31441 tgccgaagcc gacggaaaag cgtacgactt tgacgccgca caatctggca acgatgtagt
    31501 gtccgaactc gtgcaggctg accaaaatca ggatggcgaa gataaaagct agaagggtgt
    31561 gcaaatggtt ttcctttgat aacggtgttc agacggcatc agcgcagtgt gccgataaat
    31621 gcccgcgctt gtgcgcgtgt ccgggcatct tgcgccaaga gcccccctat gtcgcctatg
    31681 ccgtctgaaa agtcttgtga aagacaatgg gcgacggttt tggcaatgtc ggtaaactta
    31741 atctgtccgt ccaaaaaggc ggcgacggcg gcttcgttgg cggcgttcaa tacgcagggc
    31801 gcggctccgc ctgcgttcat ggcttcatag gcgagcttca ggcaggggaa gcggtcaaag
    31861 tcgggctttt ggaaggtcag cgcggacaat gcgtcgaaat ccaggtcgcc gacacccgaa
    31921 tcgatgcgct cgggcaaacc caaacaataa gcaatgggcg tacgcatatc gggattgccc
    31981 agttgcgcca acacggagcc gtcgcggtag cgcaccatgc tgtgtatcac ggattgcgga
    32041 tggatgacga cttcgagctt gtcaggcgga cagttgaaca gccaatgcgc ttcaatcagc
    32101 tccaaacctt tgttcatcat ggtggcggaa tcgacggaga ttttgcgccc catgctccaa
    32161 ttggggtgtt tgaccgcttg ggcgggcgta atgctgtcga acgtgtttaa atcggcggtc
    32221 agaaacgggc cgccggaagc ggtcaggata atcgaagcga tgccgtgttc gttcagacgg
    32281 ccggcgtaat cgcgcggcaa aacttggaaa acggcgttgt gttcgctgtc gacgggcagc
    32341 actgccgcgc cgtttgcacg ggcggtttcc ataaacaacg cgccggaaac caccagcgtc
    32401 tctttgttcg ccagataaat ggttttgcct ttttgcgccg ctgcgagcgc ggaaggcagc
    32461 cccactgccc cgacgatggc gcacatgaca ccgctgactt cgtcggcaga cgcaacgtca
    32521 accaatgcct gcgcgccgtg taaaacctgc gtcgccgtgc cgtcgcgttt caacagggct
    32581 tcaagccggg cggcgtgttc cgcatcggca acgacggcat attcggggcg gaacgtttga
    32641 cattgagccg ccaatttctc gacctgctta tgccctgcca gcgcgaatac gcggaatttt
    32701 tcggggtggc gggagacaac gtccagcgtg ctttcgccta tgctgccggt actgcctaat
    32761 atggtcagga cttgtggtgt cataatgagg ataactttat accggatgcc gtctgaagcg
    32821 ttttcagacg gcatagaatc aatttaaaac cgacatcatc gccgcataga cgctgataac
    32881 ggcaatcagg ctgtcggtac ggtcgaacac gccgccgtgt ccggacagca ggttgctgct
    32941 gtctttaatg cccgccgcgc gcttgagcca gctttccaac aggtcgccgc atacgctgac
    33001 aacggtcagc accaaaccga ttaacacggt atcgaaccag cctgtatcga atgccagcca
    33061 gccggcactt cgtacggcgg tcatgtacac tgccacgcaa accgcgccgc cgattgcacc
    33121 ttcccagctt ttgccggggc tgattgccgg tgcgattttg tgtttgccga acgccttgcc
    33181 gctgaaatac gcgcaaatat cggcaaccca caccaaaccc atcacggcga gcagcggcag
    33241 ggcatcatcg ggatgcgggc gcagtgatac gagcgcgaac caaaacggca tgaccagaag
    33301 ccagccgacg gcataaacct gccaaccgcc gttgagcctc catttgaatc tcaaccataa
    33361 aggcataacg gcgagccaaa atgccaaaac aacataccaa accaaattag gcagcatcca
    33421 gccgcccgca taggcaacca cgccgaaaac caaggttgcg gcgaggtaat ggttggtttt
    33481 aattttgcac aaaccgccca tacgggcata ttcccacaag gcaatcaggg caatcagtcc
    33541 gcaaaatgca gcccacaacc attgcggcgc gtaaaacagc atgcccagca tcagcggcag
    33601 cagccacatg gcggttatta cccgttgttt cagcatattc agttcctttg ctgttcgata
    33661 ggcagttgct cggaggtgcg tccgaaccgc cgttcgcgtt tttggaacga agcgacggca
    33721 tcgtccaaag ccttgccgtc aaaatcgggc cacaaaatat cggtgaaata cagttctgca
    33781 tatgccatct gccagagcag gaaattgctg atgcgcgttt cgccgccggt gcggatgaac
    33841 aaatccggtt ccggtgcatc gcccagcatc aagtgtttcg ccagcgtgtc ttctgtaatc
    33901 tcggatacgc cttcggcaat cagtttgttt gccgcctgca aaatatccca gcggccgccg
    33961 taatcggcgg caatgctcag ggtcaggccg gtattgtttg ccgtcaacgc ctccgcttct
    34021 tcgatgcctt gcagaatctg ccggttgaag cgttcgcggc tgcccagtat tttcaggcgc
    34081 atattgtttt cgtgcagacg gcgtacctgt ttttgcaaag cctgtaaaaa cagccccatc
    34141 aggaacgaaa cttcgtcttc ggggcggcgc cagttttcgg ttgaaaaggc aaacacggtc
    34201 agatattgca cacccagttt ggcgcaatgc ttcaccatat tttccaatgc gtccaaaccg
    34261 cgtttgtgtc ccattatgcg cgggaggaaa cgttttttcg cccaacggcc gttgccgtcc
    34321 ataatcacgg cgatatgctt gggaatggcg gtgtgttcca aaacggcctg cgtgctgctt
    34381 ttcatgtctg cctttcgcgg ttcggcattc aaatgccgtc tgaacgccga accgtgcagg
    34441 ttaaattgcc atcaaatctt cttctttggc agtcaggagt ttgtcggctt cggtaatgta
    34501 tttgtcggtc agtttttgaa ccgcttcttc gccgcgacgt gcctcgtctt cggaaatttc
    34561 tttgtctttg aggagttttt tgatgtggtc gttggcatcg cggcgcacgt tgcggataga
    34621 gacgcggcct tcttccgctt cgccgcgtac gactttaatc aggtctttgc ggcgttcctc
    34681 ggtcagcatg ggcatcggca cgcggatcag gtcgccgaca gctgccgggt tcagccccaa
    34741 gtttgaatcg cggatggctt tctcgacttt ggccgccata ttgccctcaa acggtttcac
    34801 gccgatggtg cgcgcgtcca gaagcgttac gttggcaact tggctgacgg ggaccatgct
    34861 gccccagtat tcgacttcca cttggtcgag caggccggta tgcgcgcggc cggtacgcac
    34921 tttcgccaga ttttctttca gtacttcgac cgaacgctgc attttgcctt cggctgtttt
    34981 ttgaatatcg ttgatcatat tgttctttcg gtgggataag gtgggcggga gaccgtctga
    35041 acgcgtttca aacctttcag acggcatgaa aactgttaac tgcgaatagt accgttattc
    35101 gggcatgacg acaaggcagg cggattgggg atgccgtctg aagcggcagg cgtttcagac
    35161 ggcatcgtgt ccgaccgtca gccgtgttcc cgtgtttcaa gcaggctttg gcgcaggtgt
    35221 tggcgttcgt gggcatccag ccatttgcgg cgggtgcgtt gcagcaggat gacgagggcg
    35281 gaaatttcct gacgcatatt ggtgctgagc cagaggaagc cctgccattg gtagtggagg
    35341 tgttcggcga gggcttccag ttcggggttg atggcggtgt cgatgcggat gcggcgggcg
    35401 tgtctgccgt tgataagggc gacggtttgt tgcaggtcgg tttggagcag tgtgaagtgg
    35461 cggtcaagca gccggatttc gctgccgttg agtttgggag attgcagctt ggcggcagtg
    35521 gtcaggagca gctcggtggt gttgacaatt ttacggtggg cgtgctgcat ggcttccatc
    35581 atggcggggc tgatgcggct ttcgcccgat gtggcggcga ggtggctgcg gcttttgacc
    35641 atgcgtgcgt tgatttggcg cattttaacc atattctgct ccaaacgttc gcgcgtcata
    35701 cgcctgccgt tgctgatttc ggcaatcatt ttgctgcagt cggtcaggtt gtcggcaagc
    35761 atgaaacgcc acatcagtgt ggatttcagc ggcagcagtt tggcggcggc gatggcgatg
    35821 gccgcgccga tgaggacgtt catcgcgcgc atcaggccgc tgtcgaacca ttcgctgccg
    35881 ttgtcgccga tgagcatgca catcgtcagc cccgccagca tagggacgta gccgtttttg
    35941 ccgaccgccg cccagccggc cagtgcgctt gccgtgccga cggtgaggta gaagaggagg
    36001 ttgccgtgga aataatgctg gttcagccat aaaacgccca aacccgcgcc cagcccgatg
    36061 accgtgccga gcatacgttc caccgccttg gagtaaatcg ccccttgaaa ctggagcatg
    36121 ccgaggacga cgaagacggt catgcctatc cattcgccgt gttggaggtg gagcagccgg
    36181 gcgagtgcgg tggcgaacag gacggccccg ccgagccgca cggcgtgtat gaggcggcgg
    36241 tggcggtagc gttcgtagga gttgagccag cggctgacga ggcggttgcg ttgcgaggtg
    36301 ttcatatcgg ttgccgtctg aagcggaaat gtgaaaaagc acaggcttcc cgaggaaggg
    36361 agggtctgtg cttggtattg gtgccggaga agggaatcga acccccgacc ttcgcgttac
    36421 gaatgcgctg ctctaccgac tgagctacac cggcgttttt tcgttatgat atatatgaac
    36481 ggttgtttgt gcaacttttc tggcgggcgg caaggcagtg cgcggtataa tgcggtctgc
    36541 ttcggaagag ggggacggcg atgtttgtga acgagaaaga tccttatgcg gctctgtttg
    36601 cggggctggt gtttttgacg ttgccgtttg cgttggcggt gcatgatgcc tttgcgcttg
    36661 cgttcggacg ggcagggctg ctggtgtcgg tgtcggccgg cgtggcggtt gggacggtac
    36721 tgtttggttt gtgttcggtg tgtttgcgtt tttgaacctg gtcgtgtcgg caggcctgac
    36781 gaagctggcg tacaaaaaga tgatgcggcg gcattcccgt tacgcgctgt ttctgtcggg
    36841 cgtggcggct tgcgcggcgg cagcggtggc ttggattttc gagctgctgc ttggcagtgg
    36901 ggctttgggc gggctgcgtg gggaggcggt gttggaatat gcgtttgccg tgtggctggt
    36961 ggcgatgctg acgctgccca aacgcctgac gcgcgcgccg gtgcagccgg tggtgtttca
    37021 caggaaaaaa taggttggaa cgggaaatgc cgtctgaacc ccgacacgcg gtttcagacg
    37081 gcatgttttt ccgttaacat tacgcctgaa tatggacagg aagcagatat ggaacgcaaa
    37141 gaacgcctgc aatcaggcat tgccgcgatg gggctggata tttcggaaac ggcgcaggac
    37201 aggcttttgg cctatgtgga tttgttgaaa aagtggaaca aaacctacaa tctgaccgcc
    37261 ctgcgcgacg aggaaaaaat gattgtccat catcttttgg acagcctgac gctgctgccc
    37321 catatcgagg gtgtgcaaac gatgctggat gtcggttcgg gcggcggtca gcccggcatt
    37381 ccggcggcgg tgtgccgtcc ggatgtgcag ataacccttt tggatgcgaa tacgaagaaa
    37441 acggcttttt tacagcaggc ggttatcgag ttggggttgg acaatgtgcg cgtggtatcc
    37501 ggacgcgtgg aggcggtttc ggacgtgcgt gccgacgtgg ttaccagccg tgcgtttgca
    37561 gaactggcgg attttgtgtc gtggacggtg catctgttga aagacggcgg ctactgggcg
    37621 gcgatgaagg gcgtgtatcc gcagggggaa atcgaccacc tgccgcagga tgtgtgcgtc
    37681 gaaaaagtcc aaaggcttga cgtgccgggc ttggatgcgg aacgccatat cgtcatactc
    37741 cgcaagcgtt gagcgcgctt cagacggcat gaataccttt tttgtgcgga taaaggtaaa
    37801 attccgcact gtttttcttt tttcaacatc agacgggaca cgggcgggac atgagtgcga
    37861 acatccttgc catcgccaat cagaagggcg gtgtgggcaa aacgacgacg acggtaaatt
    37921 tggcggcttc gctggcatcg cgcggcaaac gcgtgctggt ggtcgatttg gatccgcagg
    37981 gcaatgcgac gacgggcagc ggcatcgaca aggcgagttt gcagtccggc gtttatcagg
    38041 tcttattggg cgatgcggac gtgcagtcgg cggcggtacg cagcaaagag ggcggatacg
    38101 ctgtgttggg tgcgaaccgc gcgctggccg gcgcggaaat cgagttggta caggaaatcg
    38161 cccgggaagt gcgtttgaaa aacgcgctca aggcagtggc ggaagattac gactttatcc
    38221 tgatcgactg cccgccttcg ctgacgctgt tgacgcttaa cgggctggtg gcagccggcg
    38281 gcgtgattgt gccgatgttg tgcgaatatt acgcgctgga agggatttcc gatttgattg
    38341 cgaccgtgcg caaaattcgt caggcggtca atcccgattt ggacatcacg ggcatcgtgc
    38401 gcacgatgta cgacagccgc agcaggctgg ttgccgaagt cagcgaacag ttgcgcagcc
    38461 atttcgggga tttgctgttt gaaaccgtca tcccgcgcaa tatccgcctt gcggaagcgc
    38521 cgagccacgg tatgccggtg atggcttatg atgcgcaggc aaagggtacc aaggcgtatc
    38581 ttgccttggc ggacgagctg gcggcgaggg tgtcggggaa ataggtcaat ccaaatcggg
    38641 ctgcccgtgc ctttatgctg tttggccggg tgcgttaata tggcggatta aaataaaaat
    38701 acttatatcg tc
//
LOCUS       DBBZYD010000006        38497 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.006, whole genome shotgun sequence.
ACCESSION   DBBZYD010000006 DBBZYD010000000
VERSION     DBBZYD010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.006"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            142..576
                     /locus_tag="ACJJDL_000251"
     CDS             142..576
                     /locus_tag="ACJJDL_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HGG7573040.1"
                     /translation="MNFALSVIMLTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(624..1967)
                     /locus_tag="ACJJDL_000252"
     CDS             complement(624..1967)
                     /locus_tag="ACJJDL_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HGG7573041.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGVWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(1972..2625)
                     /locus_tag="ACJJDL_000253"
     CDS             complement(1972..2625)
                     /locus_tag="ACJJDL_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HGG7573042.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2776..3066
                     /gene="gatC"
                     /locus_tag="ACJJDL_000254"
     CDS             2776..3066
                     /gene="gatC"
                     /locus_tag="ACJJDL_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HGG7573043.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQNI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRDRLYIVPQVIEE"
     gene            3129..4574
                     /gene="gatA"
                     /locus_tag="ACJJDL_000255"
     CDS             3129..4574
                     /gene="gatA"
                     /locus_tag="ACJJDL_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HGG7573044.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4571..5503
                     /locus_tag="ACJJDL_000256"
     CDS             4571..5503
                     /locus_tag="ACJJDL_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HGG7573045.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5546..6976
                     /gene="gatB"
                     /locus_tag="ACJJDL_000257"
     CDS             5546..6976
                     /gene="gatB"
                     /locus_tag="ACJJDL_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HGG7573046.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAESEATIAEIIEKHGLQQMTDTGAIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7068..8078
                     /locus_tag="ACJJDL_000258"
     CDS             7068..8078
                     /locus_tag="ACJJDL_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HGG7573047.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVRGDIQMDGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILE
                     LHIRRRKNGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQNSSRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8207..8839)
                     /gene="pdxH"
                     /locus_tag="ACJJDL_000259"
     CDS             complement(8207..8839)
                     /gene="pdxH"
                     /locus_tag="ACJJDL_000259"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HGG7573048.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            9070..10119
                     /locus_tag="ACJJDL_000260"
     CDS             9070..10119
                     /locus_tag="ACJJDL_000260"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG7573049.1"
                     /translation="MSKQPTSKRQWRDGVAPSAKKTAKPFKSKARPKDETDKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANILK
                     WAEMLLPGERRRKKA"
     gene            complement(10188..11729)
                     /locus_tag="ACJJDL_000261"
     CDS             complement(10188..11729)
                     /locus_tag="ACJJDL_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HGG7573050.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVSTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVVETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSVGRQASVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(12340..13695)
                     /gene="xseA"
                     /locus_tag="ACJJDL_000262"
     CDS             complement(12340..13695)
                     /gene="xseA"
                     /locus_tag="ACJJDL_000262"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HGG7573051.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPTRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            13892..14713
                     /gene="nadE"
                     /locus_tag="ACJJDL_000263"
     CDS             13892..14713
                     /gene="nadE"
                     /locus_tag="ACJJDL_000263"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HGG7573052.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGVHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(14783..15256)
                     /gene="dnrN"
                     /locus_tag="ACJJDL_000264"
     CDS             complement(14783..15256)
                     /gene="dnrN"
                     /locus_tag="ACJJDL_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HGG7573053.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAELLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQAPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            15558..15890
                     /gene="trxA"
                     /locus_tag="ACJJDL_000265"
     CDS             15558..15890
                     /gene="trxA"
                     /locus_tag="ACJJDL_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HGG7573054.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(15943..16890)
                     /locus_tag="ACJJDL_000266"
     CDS             complement(15943..16890)
                     /locus_tag="ACJJDL_000266"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7573055.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            17219..18607
                     /locus_tag="ACJJDL_000267"
     CDS             17219..18607
                     /locus_tag="ACJJDL_000267"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG7573056.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGRGERRYKDR"
     gene            complement(18882..19082)
                     /locus_tag="ACJJDL_000268"
     CDS             complement(18882..19082)
                     /locus_tag="ACJJDL_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573057.1"
                     /translation="MPSEGLSDGIFAFVRDIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVMPPLGFQTASYRTVKP"
     gene            complement(19096..19650)
                     /locus_tag="ACJJDL_000269"
     CDS             complement(19096..19650)
                     /locus_tag="ACJJDL_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573058.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSAHPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            complement(19735..20235)
                     /locus_tag="ACJJDL_000270"
     CDS             complement(19735..20235)
                     /locus_tag="ACJJDL_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573059.1"
                     /translation="MNAMPQTAAQNETLHICSIIVDDARDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            20639..21832
                     /locus_tag="ACJJDL_000271"
     CDS             20639..21832
                     /locus_tag="ACJJDL_000271"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine/succinyldiaminopimelate
                     transaminase"
                     /protein_id="HGG7573060.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALADALNTQMHKLWHISNIYTTRPAQELAQKLVKNSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATETIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVCSQGQKLQTALRSLGEQTGVFKQVRGMGLLLGCVL
                     DAPYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLDDEDTAEGLRRLEHVLTEFA
                     AANRP"
     gene            complement(21897..23141)
                     /gene="clpX"
                     /locus_tag="ACJJDL_000272"
     CDS             complement(21897..23141)
                     /gene="clpX"
                     /locus_tag="ACJJDL_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HGG7573061.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGKEPELVFES"
     gene            23331..23702
                     /gene="rbfA"
                     /locus_tag="ACJJDL_000273"
     CDS             23331..23702
                     /gene="rbfA"
                     /locus_tag="ACJJDL_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HGG7573062.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKIPELHFKYDESL
                     ERGMNLSALIDQVAAEKPVED"
     gene            23735..24658
                     /gene="truB"
                     /locus_tag="ACJJDL_000274"
     CDS             23735..24658
                     /gene="truB"
                     /locus_tag="ACJJDL_000274"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HGG7573063.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFRAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIVATARAD
                     ISLAEFQTACKALTGDIRQVPPMFSALKHEGKPLYEYARKGIVIERKARYITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLSCDVLVSHFPQTVLNDYAVHMLRCGQRPRFEEDLPSGTPVRVYT
                     EIGEFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            24875..25399
                     /locus_tag="ACJJDL_000275"
     CDS             24875..25399
                     /locus_tag="ACJJDL_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7573064.1"
                     /translation="MKTVIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNSQPASQPASQPASQPASQPASQP
                     ASQPASQPANYTLN"
     gene            25633..27105
                     /locus_tag="ACJJDL_000276"
     CDS             25633..27105
                     /locus_tag="ACJJDL_000276"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - obsolete DNA methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7573065.1"
                     /translation="MIYIDPPYYFVKKKQQDSFGYNTNFKLSTWLTFMKNRLSIAKEL
                     LTDDGIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIMNLKGNNDEYAFAGTHEYT
                     LVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGFYKKGAPMRATGTEDKREDRPEMFYP
                     FLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEKYENLGYNFILPIADKQWGRW
                     RWGYSIKNKARLQTDIIVSQSKNGISLYKKQRPELDDLPTKKPKTIFYKPEYSSGNGT
                     EQMKNLFGEKAFKNPKPEELIQDFITITTNESDIVLDYHLGSGTTAAVAHKMNRQYIG
                     IEQMDYIETLAVERLKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACE
                     DSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLALDEQKQMVLEMLDLNQMY
                     VSLSEMDDEQFAGCLNDDDKALSREFYQSAKNQAEKKDGE"
     gene            27095..29875
                     /locus_tag="ACJJDL_000277"
     CDS             27095..29875
                     /locus_tag="ACJJDL_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HGG7573066.1"
                     /translation="MANNKTLFDWVEDRKSTLEEIEQTDFFALPEFVERNLKYPFFEW
                     QKSALENFVIFDRASKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPAHSKFLFTEKILQGDQVIPIHKVETFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNAQTKGKKQGELDLEVELKA
                     NAGDAEFERKGWEHMVLELLLNKNGNPGQNVLLEFTATPPEKADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLSKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     VDESKADYLAFLNWVENVQADDFSFLKTFSMSLNDSDNANEQGKTRTEQALKFMQENG
                     FEFAHLANWIKQNYQKHNIIITNSETNKSKTEKTDSETEKLLNNLEAVDNPIRAIFTV
                     GRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSCKTANTTVSEKQLIGRGVRYFPFSFED
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYITELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFADNENFKNLLIWANKKIPNPNAKSNNADSLKANPQTLSFQIHGNQLLQETQ
                     FTADKNDEKVKQLGIQNNFSQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSKLN
                     IQNRNELQNNLLKDWQIEFLGLEQDKQVRPDDKLAGCLKILEMVEKHLNESDKPFIGT
                     KEFTPKTLWEIFGTPKQKWVKKDDIKTAIAMQNDWYVMDNFAGTGLEEALIQFISARL
                     GDLKSQYDIHLIRNEEVFKLNNFDNGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFI
                     EPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTES
                     FPLGAASLEKMK"
     gene            complement(30019..31191)
                     /locus_tag="ACJJDL_000278"
     CDS             complement(30019..31191)
                     /locus_tag="ACJJDL_000278"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HGG7573067.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            31482..31928
                     /gene="iscR"
                     /locus_tag="ACJJDL_000279"
     CDS             31482..31928
                     /gene="iscR"
                     /locus_tag="ACJJDL_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HGG7573068.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            31957..33171
                     /locus_tag="ACJJDL_000280"
     CDS             31957..33171
                     /locus_tag="ACJJDL_000280"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HGG7573069.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKVDLLSMSGHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYVNGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            33238..33366
                     /locus_tag="ACJJDL_000281"
     CDS             33238..33366
                     /locus_tag="ACJJDL_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573070.1"
                     /translation="MNEQDLDLDNLDNLLDDFDGVTVEGGVDSENDDGCEGGACKI"
     gene            33432..33818
                     /gene="iscU"
                     /locus_tag="ACJJDL_000282"
     CDS             33432..33818
                     /gene="iscU"
                     /locus_tag="ACJJDL_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HGG7573071.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            33905..34225
                     /gene="iscA"
                     /locus_tag="ACJJDL_000283"
     CDS             33905..34225
                     /gene="iscA"
                     /locus_tag="ACJJDL_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HGG7573072.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(34185..34406)
                     /locus_tag="ACJJDL_000284"
     CDS             complement(34185..34406)
                     /locus_tag="ACJJDL_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HGG7573073.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKHGSFRRSRRSL"
     gene            34488..34988
                     /gene="hscB"
                     /locus_tag="ACJJDL_000285"
     CDS             34488..34988
                     /gene="hscB"
                     /locus_tag="ACJJDL_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HGG7573074.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKKSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            35086..37836
                     /gene="gyrA"
                     /locus_tag="ACJJDL_000286"
     CDS             35086..37836
                     /gene="gyrA"
                     /locus_tag="ACJJDL_000286"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HGG7573075.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVRKKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            37993..38396
                     /locus_tag="ACJJDL_000287"
                     /pseudo
     CDS             37993..38396
                     /locus_tag="ACJJDL_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT        10297 a        10419 c         9314 g         8467 t
ORIGIN      
        1 ttttgggaat ctgttttacc ccaatatata aagcaccata ttaaggcgga gtgtcttccc
       61 cactttgacc cgaacccgga aaagacaccg cccaagccaa tcctgatgct gccccgacag
      121 ccaaccatta aggaaatcct aatgaacttt gctttatccg tcattatgtt gaccctcgcc
      181 tctttcctgc ccgtcccgcc tgccggagcc gccgtcttta cttggaagga cggcggcggc
      241 aacagctatt cggatgtacc gaaacagctt catcccgacc aaagccaaat cttaaacctg
      301 cggacgcgcc aaaccaaacc ggcggtcaaa cccgcccaag ccgacgcagg gaagcgcaca
      361 gacggcgcgg cacaggaaaa caatcccgac actgccgaga aaaaccggca gcttgaggaa
      421 gaaaagaaaa gaattgccga aaccgaacgg cagaacaaag aagaaaactg ccggatttca
      481 aaaatgaacc tgaaggcggt gggaaattca aatgcaaaaa acaaggatga tttgattcgg
      541 aaatacaata acgccgtaaa caaatactgc cgttaatcgg ctctagcgca aacccgatgc
      601 cgtctgaagc ggcacggggt ttgtcatttc tgccagtagg ttttgacgtt gacgaactcg
      661 tacagcccga attcggacaa ttcgcgcccg taaccggaat ctttgactcc gccgaaaggc
      721 aggcgcaaat cgctgctggt atggcggttg ataaacaccg atcccgcctg tattttttcg
      781 gcaaaccgcc aagcgcgttc ggtatcggcg gtataaatgc aggcaccgag cccgaacggg
      841 gaatcattgg caagggcgat ggcatgttct tcgttttcgg cgcgcaaaat cagggcggcc
      901 ggcccgaata cttcttctct ccagacgcgg caggcaggat ttaccctgtc taaaaccgtc
      961 gcgggataaa accagcctcg cccttgtggg atttttccgc cggtcaggca taccgcgccg
     1021 tttgaaacgg catcttcaac ctgcccgtga accctgtccc gcaaatcttc gcggtgcagc
     1081 ggtgcaagcg tagtatcggg atgtttgggg tcgcccattt tcaatttagc gcattcggca
     1141 agaaacagcg tgataaaacg atcggctgcg gcttcggtta cgatgatgcg cttggcggcg
     1201 ttacacgatt gccccgcatc gcggaaacgg gaataacagg cttctgcggc ggcacgctcc
     1261 aaatcagcat cgggcatcac gataaaggcg ttgctaccgc cgagctccaa cacggttttc
     1321 ttaaggtttg cgcccgcgtg tgccgcaagg atgcgccccg tatgcgttga accggtaaac
     1381 gccattgcat cggtatcttc aaccgccttg agcgtgcccg cctcatccag ccacacgcct
     1441 gccagaggaa tgccgtctga agccaaatcg aacagtgcct gactgacgcg tgccacgctg
     1501 ggcgcgggtt tgacggcgca cgcgttgccc gcgcacatag cgggaacggc gaaacgcaat
     1561 acctgccaga cgggatagtt ccaaggcatg acggcaaaca ccacgcccaa aggctcgaag
     1621 cgcacctgac tcaaactcgc ctgcgtcgcg atggttttgt gggcaagcag ttcgggggca
     1681 aggcgggcgt aatagcgtat cagttcgata gacttgccga tttccgcacg gcattcgtgc
     1741 aagcagcgtc cgacttcctc acacaccatt tccgcaaaac gctctttctc cgcctccaaa
     1801 cggtcggcaa atttttgcag gcgcgcggca cgttcggtta cgcccagttg cgcgaacgcc
     1861 ccgccgcgca ttttcaaatc cgccagccgc cgttcaaact ccgcataatc ttgagctgga
     1921 cggcggtaaa gcgtttcgcc cgtaaataca ttgacactgt gaaacatcga atcaacctgc
     1981 cagttgcggg aatatcgttt tcagtcccga cacaataatc tccaccgata ccgccgccag
     2041 catcataccc ataatgcggt ttaaaatcgt cagccccgtc gcgcccagca ggcggctgac
     2101 cttcccggca acgattaaaa tggcataaca aatcgcactg accaccaaac cggccgcgat
     2161 aatcaacgcg atgtcgccgt atgttttagc cgccgaagcg taaataatca cggtcgaaat
     2221 accgcccggg ccgatggtga tcggtatggc gatgggcacg acggcaatcg ctccggcatt
     2281 gcgggcgggg cgcgcctgcc ccgtttccgg ctgcgcgccg agattctgct tggcgggatt
     2341 gtcgttgccg ttcatcatag aaatggcaat cagcaacacc aaaattccgc cgccgacctg
     2401 aaacgaaccg acgctgatgc ccaaaacctt cagcagcgta ccgccgatca gcgcaaatac
     2461 cgcaatcacg gcaaacacgg caacggcggc cgtccgcgcg accttcctgc gctccttcgt
     2521 gctgtgcccg ttggtcaggt caaggtaaag cgacaacgcg ctaaacggat tgatcagcac
     2581 caaaaaagcc acaatcagct tgccgatttc catgcccaat cccattattt ccccctcctt
     2641 caaacccgtg cggcaggcat ccgatgctgc aaattgccgc cgcaacggat ttttccgtta
     2701 taattaaaaa ttcaagcaat acgccccatc atacccgaac gacggtatct ttaccatcag
     2761 acaaggatgc ttttcatggc actgacactt gccgacgtag acaaaatcgc ccgactctcc
     2821 cgactgcacc tgactgcgga agaaaaagaa aaatcgcttc aagaattaaa cgacattttc
     2881 actatggtcg aacagatgca gaacatcaac acagacggca tcgaaccgat ggcgcacccg
     2941 cacgaggccg ccctgcgcct gcgcgaagac gaagtaaccg aaaccgaccg cgccgccgaa
     3001 tatcaggcgg tcgcaccgga agtacgcgac cgcctgtaca tcgtaccgca agttatcgaa
     3061 gaataatccg aatacgcttc agacggcatc agcaataccg cccgaagccc tttaaggatg
     3121 gaagatttat gacccaatac acattgaaac aggcaagcgt cctgttgcag tccaaacaga
     3181 tttccgccgt cgaactggca agcgcatacc ttgccgccat cgccgaaaaa aatcccgccc
     3241 tcaacggcta tatcaccatc gaccaagata aaacccttgc agaagcccgt gccgccgacg
     3301 aacgtatcgc gcagggcaac gcctccgcgc ttaccggcgt acccgtcgcc tacaaggata
     3361 ttttctgcca aaccggctgg cgcagcgcgt gcgcttccaa aatgctcgac aacttcatct
     3421 ccccctacac cgccaccgtc gtccaaaacc tgctcgacga aggtatggta acgctcggcc
     3481 gcaccaatat ggatgagttc gctatgggtt cgaccaatga aaactcattc tacggtgcag
     3541 ccaaaaaccc atggaatctt gagcacgtcc ccggcggttc gtcaggcggt tccgccgccg
     3601 tcgttgccgc gcgcctcgcc cctgccgcgc tcggttcgga caccggcggc tctatccgcc
     3661 aacccgcatc gcactgcggc attaccggca tcaaacccac atacggcacg gtttcccgct
     3721 tcggtatggt cgcctacgcc tccagcttcg atcaaaccgg cccgatggcg caaactgccg
     3781 aagactgcgc gattctgtta aacgcgatgg caggtttcga ccccaaagac tccaccagcc
     3841 tcgagcgcga aaaagaagac tacacccgcg atttgaacca accgctcaaa ggtttgaaaa
     3901 tcggcctgcc caaagaatat ttcggcgaag gcaacagcgc cgatgttctg acggcattgc
     3961 aaaacaccat tgatttgctg aaagcccaag gcgcggaatt gattgaagtt tccctgccgc
     4021 aaaccaagct gtccatcccc gcctactacg tcctcgcctc cgcagaagcc agcaccaacc
     4081 tttcacgtta cgacggcgta cgttacggac accgtgccgc ccaattcgcc gatttggaag
     4141 aaatgtacgg caaaacccgc gccgaaggtt tcggcagcga agtcaaacgc cgcatcatga
     4201 tcggcactta tgtactgtcg cacggctact acgatgccta ctatctcaaa gcccaaaaac
     4261 tgcgccgcct cgttgccgat gattttcaga cggcatttgc acggtgcgac ctcatcctcg
     4321 cgccgaccgc acccactgca gccccaaaaa tcggagcgga tgcttcgccg gttgaaacct
     4381 acttgagcga tatctacacc atcgccgtca acctcgccgg actgcccgca ttgaccctgc
     4441 ccgcaggctt cagcggcggc ggactgcccg tcggcgttca gcttgtcggc aactacttcg
     4501 ccgaagccaa aatcctcggt gcggcgcatc aaatccaact caacagcgat tggcacggca
     4561 aacgacccga atgaagcaga accgcacctt taccttcccc gattttcgca ccgtttacag
     4621 ctatgcgcct ttatatcggc tgcaacattt aaaatacaca ttgcgaaaat ttttcggaaa
     4681 aaaagaaatt tacgccttcg agcagtttgt caacgcctcc cctatccgtc aggggctgtt
     4741 cctccactgc ccgcaaaatg cctatccgct gctgcgcgaa tttgttgaca ggcgttttaa
     4801 ctgcaaacgc cgtttagatg cgatgacggc agattttctc atggcggaaa aactgttcgg
     4861 cacagacatc ctgcaccaaa tggaagacta ccgcttccat ttggtcttgg cgcacctttc
     4921 agacggcatc agcttgtggc tcaaccgcaa cgacaactgc gtcgaagaag gcgcgtggtc
     4981 tttatctttg cgcgacgaag caggcaaccg gctgtatatg gcgactttcg cctttgtcgg
     5041 cacacacctg ctgacagcct ccgtacaagg gcctgcgggt gaagaagcca aagacactgt
     5101 ccgccgcata accaaacaac ttcacggctt gcgtccccaa caactgatgg taaccgccct
     5161 gcaatatttc gccgccgtac tcggcttgga cggcgcaatg ggcattgcac aaaaacatca
     5221 ggtcaaactg cgctggaaac ttaaaaagcg tgtcaaaatg aattacgacg cattctggca
     5281 ggaatacggc gcaagtttgg aacgggacgg ctactggcat ctcccccaaa cccccgcccg
     5341 caaagacctt accgacatcg aaagcaaaaa acgctcgatg taccgcaagc gttatgaaat
     5401 gctggacaac atggttgcag agatgaagga cggtctgaaa acagaagcac gcggcatttc
     5461 agacggcatc caaacggaaa aaccgctccg ccggacagcc tgacgcgaag actatcgaat
     5521 tgatatttta gagaaagaag ctcttatgac ctgggaaacc gtaatcggct tggaaatcca
     5581 cgtccaattg aacaccaaat ccaaaatctt cagcggcgca tcgaccgcat tcggcgcaga
     5641 acccaacgcg cacgccggcg tagtggaatg tgctttgccg ggcgtactgc cggtaatgaa
     5701 ccgagaagtc gttgaaaaag ccatcaaatt aggcttggct ttggatgcga aaatcaaccg
     5761 gaaaaacgtg ttcgaccgta aaaactactt ctatcccgac ttaccaaaag gctatcaaat
     5821 cagccagttg gacttaccga ttgtcgaaca cggcaaattg gaaatcgtag tcggcgacga
     5881 tgtgaaaacc atcaacgtaa cccgcgccca tatggaagaa gacgcgggca agtccgtaca
     5941 tgaaggcttg aacggcgcga ccggtatcga tttgaaccgc gccggcacgc ctttattgga
     6001 agtcgtatcc gaacccgaaa tgcgctccgc cgccgaagcc gttgcctacg ccaaagcctt
     6061 gcacagcttg gtaacctggc tgaacatttg cgacggcaat atggcggaag gttcgttccg
     6121 cgtcgatgcc aacgtatccg ttcgcccgaa aggtcaagcg gaattcggca cgcgccgcga
     6181 gattaaaaac ctcaattcct tccgtttctt ggagcaggcg attaattacg aagcagaagc
     6241 gcaaatcgag attttggaag acggcggcaa agtacagcag gcaacgatgc tgtttgatcc
     6301 cgaaaaaggc gaaacccgcg taatgcgcct gaaagaagac gcgcaagact accgctactt
     6361 ccccgacccc gatttgctgc ccgtcatcat ttcagatgcc caaatgcaaa aagccaaagc
     6421 agaaatgccc gagctgccga aagaaatggc agcgcgtttc gtggcggact acggcgtgtc
     6481 cgaatacgac gcgcgcctgc tcaccgcaag ccgcgcacag gccgcctatt ttgaagaagc
     6541 cgccaaagag agcggacaag gcaagccgac tgccaactgg atgaacggcg aactcgccgc
     6601 cgcactgaac aaagaaggca tggaacttgc cgacagcccg attaccgctc cgcgcctcgc
     6661 cgcgctggta ggcaaaatcg ccgacggcac attaagcagc aaattagcga aaaaagcctt
     6721 tgaagccatg tgggcagaat ccgaagccac cattgccgaa atcattgaaa aacacggttt
     6781 gcagcaaatg accgataccg gcgcgattga agccatggtg gacgaagtgc tggcaaacaa
     6841 cgccaaagcc gtggaacagt tcaaatccgg caacgaaaaa gccctgaatg cgattgtggg
     6901 acaagtgatg aaggccagca aaggcaaagc caaccccgcg caggttcaag agctgattaa
     6961 agccaaactt gcctgacaag caagatgccg tctgaaaccc aaatccgacg ttcagacggc
     7021 attttcacag tctgaccaca ttaaaacagc ataaaaaaca atattccatg aaccacaccg
     7081 ttaccctgcc cgaccaaacc acctttgccg ccaacgacgg cgaaaccgtt ttggccgctg
     7141 ccgcccgaca aaacctcaac ctgccccatt cctgcaaaag cggtgtctgc ggacaatgca
     7201 aagccgaact ggtcagaggc gatattcaaa tggacggaca ctcggaacag gctttatccg
     7261 aagcagaaaa agcgcaaggc aagattttga tgtgccgcac caccgcgcaa agcgatatca
     7321 gcatcaacat ccccggctac aaagccgatg ccctacccgt ccgcaccctg cccgcacgca
     7381 tcgaaagtat tattttcaaa cacgatgtcg ccctcctgaa acttgccctg cccaaagccc
     7441 cgccgtttgc cttctacgcc gggcaataca ttgatttact gctgccgggc aacgtcagcc
     7501 gcagctactc catcgccaat ccgcccgacc aagaaggcat tttggaacta cacatccgca
     7561 ggcgcaaaaa cggtgtctgc tcggaaatga ttttcggcag cgaacccaaa gtcaaagaaa
     7621 aaggcatcgt ccgcgttaaa ggtccgctcg gttcgtttac cctgcaggaa gatagcggca
     7681 aacccgtcat cctgctggca accggcacag gctacgcccc catccgcagc atcctgctcg
     7741 accttatccg ccaaaacagc agccgcgccg tccatttcta ctggggcgcg cgtcatcaag
     7801 atgatttgta tgccctcgaa gaagcacaag ggttggcatg ccgtctgaaa aacgcctgct
     7861 tcacccccgt attgtcccgc cccggagagg gctggcaggg aagaaaaggg cacgtacaag
     7921 acatcgcggc acaagaccac cccgacctgt cggaatacga agtatttgcc tgcggctctc
     7981 cggccatgac cgaacaagca aaaaatctgt ttgtgcaaca gcataagctg ccggaaaact
     8041 tgtttttctc cgacgcattc acgccgtccg catcataatt ccccggtata aaaaagattc
     8101 aggctttccg ttcggaacac aaaaaacttc ccgtccgtat tttccccata aaaaatgccg
     8161 tctgaagccc gattccggtt ttcagacggc atatgttttt tcctgttcaa ggcgacagcc
     8221 gctcgcgtat ccagccacca tccagcaaac ggtattggat gcggtcgtgc agcctgctcg
     8281 gcctgccctg ccaaaactca atcaaatcgg gaatcacaat atagccgccc caatgcggcg
     8341 gacgcggcac gtgcaaagga tgtttgagtc cgaccgccgc cgcctttgcc accaataccg
     8401 ccttgttcgg aatcacctcg ctctgcgcac ttgcccacgc acccaaacgg ctctgatacg
     8461 ggcggctctc aaaatattcg tccgacaact tctccgccag cctttcaaca cgcccttcca
     8521 cgcgcacctg acgctccagc tccggccaaa aaaacgtcat cgccgcaaat ggatgagcat
     8581 ccagcgaacg tcccttacgg ctgtgataat tcgtaaagaa aacaaaacct tcagaattaa
     8641 cttccttcag cagcaccata cggctgttgg gtctgccgcg tccgtcgacc gccgccacat
     8701 taaccgccgt cggctcgttg acctgtgcgc gtaccgcctc gtccaaccac cgctcgaact
     8761 gctcgatcgg attgtcggcg caatcgcctt ccgacaattc ccgtttactg taatcttccc
     8821 gaatattgtg caaatccatt taccgctcct cttgtcattt gaaagattct acccccgcac
     8881 gcaaaccgat ttcaaccgtt gcacaaactt tgcctcgctt ctccaaacct caggacacaa
     8941 cgatttcatc cgcaaaaccg ccgcataagg tacaatatcg aaccgtccga ccgagggcgg
     9001 cattttatca acccgtcctg ccgcacacgc cgcagaagaa ccgccttatc aggcgagtta
     9061 ggaaaaatga tgtccaaaca gcccaccagc aaacgccaat ggcgcgacgg cgtagccccg
     9121 tctgccaaga aaaccgccaa acctttcaaa agcaaagccc gtcccaaaga cgaaacggac
     9181 aaaaccgcat cccaacctta cggacaaaaa gcttcagacg gcatcaaacc tcaaaacctc
     9241 cccaaacagc gcgccgccaa agccaaaaaa ctcgtcgtcc gcaatcccaa ccaaaaaatt
     9301 atggaacacg cgcgcgattt aaaagaacgc cgcagcgacc tatcgcgcat ggaacccgaa
     9361 cgcctgcaaa aagtgcttgc cgcgtccggc gtcggctcgc gccgcgaaat ggaagaatgg
     9421 atcaacaacg gctgggtaac ggtcaacggc aaaaccgcgc aactgggcga caaagtcacc
     9481 cccgacgacc acgttaccgt caaaggcagc atcatcaaac tcaaatgggc cgaccgcctg
     9541 ccgcgcatca tcctatatta caaacaagaa ggcgaaatcg tttcccgcga cgacccgcaa
     9601 ggccgcgtca gcatattcga ccgcctgccg caggccgcca gcagccgctg ggtcgccatc
     9661 ggacgcttgg acatcaacac cagcggactt ctgattctca ccacctccgg cgaactcgtc
     9721 caacgtttcg cccaccccag cttcgaagtc gaacgcgaat acgccgtgcg cgtactgggc
     9781 gggctgaccg gcgaacaaat gcgcgtcctc accgaagaag gcgtgatgct cgaagacggc
     9841 ttggcaaaag tcgaacgcat ccgcgaacaa ggcggcgaag gcgcgaacaa atggtacaac
     9901 gtcgtgatta aagaaggccg caaccgcgaa gtgcgccgca tttttgaaag ccaaggactc
     9961 accgtcagcc gcctcgtgcg cgtcggcttc ggccccatcg gactgcccaa ccgcctcaaa
    10021 cgcggacagt tctacgaact caaccccgcc gaagtcgcca acatcctcaa atgggcggaa
    10081 atgctgctgc cgggcgaacg ccgccgcaaa aaagcctaaa cccgccaaaa cacaaaaatg
    10141 ccgtctgaaa catctactgt ttcagacggc attttattcg ggcgttttca ggagaaaagg
    10201 tcgagtgctt tgacaaagac catcaccacg ccgtaggcga gcggtatgac ggccaatgcc
    10261 caacgccacc agaccgatat gccgccgccg gaaacttttt cgcccacaag gtaagcgtcg
    10321 gatatggcgg tttcgtcatc ggggttgccg ctgtgtgcgg cggttttgat gtctttttcg
    10381 tggtgttttt cgtgtacgga tttgacggcg aggttgcaca acaaaccgat aatcagcagg
    10441 cacgccatga tgtacatggt tacgctgtat gcctgtgccg ccggtatgcc gctgtcgatt
    10501 tggctttggc gtatgtaatt gaccagtacc gggccgatga cggcggcggt tgaccaggcc
    10561 agcaggatgc gcccgtgaat cgcgccgacc tgataggtgc cgaacaggtc tttcaggtag
    10621 gcgggaatgg cggcaaatcc gccgccgtac atggaaataa tcacgcaaaa gccgatgatg
    10681 aacagggctt tgctgccgcc ctcgccgatg gagggaacgg cgaaatacag cagcgaaccg
    10741 agtacgaaga aaatggtgta ggtgtttttg cgtccgattt tgtcggaaac gctcgaccat
    10801 aaaaagcgtc cgcccatgtt aaacaggctc aggaggctga cgaagcctgc cgccgcacct
    10861 gcgccgactg acgcctgcct gcctacggag gtttcggaaa agagttcctg aatcatcacg
    10921 gatgcctgac ccaatacgcc aatgccggcg gttacgttca ggcacaatac ccagaacaac
    10981 agccaaaatt gcggcgtttt catggcttgt gacacgttga catgattgct gctgaccagc
    11041 ttgttttgcg ttttcggcgc ggtatagcct tcaggtttcc agccgtcggc aggtacgcgg
    11101 atggtaaacg cgccgaacat catcagtgcg aggtaaagca ggcccaatac ggcgaaggtt
    11161 tcaacaaccc cgactgaagc ggcgtttgaa aaggcgttca tcagtgatac ggaaagcgga
    11221 gaggccagca ttgcgccgcc gccgaaaccc ataatcgcca aaccggtcgc catacccggc
    11281 ttgtcgggaa accatttcat cagtgtggaa accggcccga tgtagcctaa gcctaagcct
    11341 acgccaccga tgacgccgtt gcccaaataa agcaggaaga ggttgtgcgt actcacgccg
    11401 aatgcggata cgaagaagcc caggctgaaa cagcaggcgg cggcaaatat ggctttgcgc
    11461 ggccctaccc gttccatcca tgtgccgaac agggcggccg acgcgcccag catcgcgagt
    11521 gcgatactga aaatccaacc tacggtcgtc agcttccaat ctccggccgc cgattcggtt
    11581 atgccgataa gtttggtcag cggcgcgttg aatacggaat aggcgtaaat ctgcccgatg
    11641 gcaaggtgta ccgccaatgc tgcgggcggt acgagccaac ggttgaaacc cggcttggca
    11701 atgcttgcct cacggtctaa aaacttcata acatcctctt tctgtcagtt gaaaaataaa
    11761 atttcatttg ctcaatggaa acttattgaa aactataaaa aaatatcgga tcggtttttt
    11821 atccgcccca agatgccccg tctgaaacat ttcgggtgta cggaaaggtt tctgtttttt
    11881 ccgacaaatt cctgcggctt ttcgcttccg gattcccgct tttgcgggaa tgacgaatta
    11941 aagattatct taaggtcaag ggactggatt cccgcttttg cgggaatgac ggcggcgggt
    12001 tgctgttttt tatttataaa tttctgtaac tttggatttc agccatcttc aataaattat
    12061 cgaaacgtat caatcgtcat tcccgcgcag gcgggaatcc atccagttcg ttcgatttcg
    12121 gttttttaag tttcgagtaa cttctgactc gtcattcccg cgtaggcggg aatccggttt
    12181 tttgagtttc agtcatttct aatacattcc caccactttt cgcttccgga ttcccgcttt
    12241 ttcaggaatg acgaattaaa gattatctta aggtcaaggg actggactcc cgcttttgcg
    12301 ggaatgacgg cggaggggga gcggtttttc cgattgggtt taaatgcaat cgaacaaatc
    12361 ctgctgccct tgttctttgc ttacgcgcac gtcggtttcg ccgtcggcga aggtaatgtg
    12421 cagcttctgc ccctgcttca aaacatcggc gttgcggatg acttgtccgc gtgtgttttt
    12481 gacgacggaa aagccgcgct ccagaatgtg ctgcggcgaa acggcttcga gcaatgcggc
    12541 ttgggcggtc aggctttggc ggcggtgggt aagcagttgg ctgaaggcgg cgggcaatgc
    12601 cgtctgaagg cggacgatgt tgtttttgca aacggaaaca tcaggacggt aatgttgcag
    12661 ggcttgggtt tggcgttcaa aacgggcggt gtgggcacgg aggttttgct tcatcgagta
    12721 agacagcgtt tgcgccagct tgccgattga agcgcgctgc tcatcaagtt tttggcgcgg
    12781 atgacggatt tgccgcgcaa gccagtcgag tttttggctg gcatcgaaat agcgttgttc
    12841 caaaacggtt ttcagacggc cttgcgcctg agcgagacga tgtagcgatt cttggcggtt
    12901 ggggctgacc agctccgccg caccggtcgg cgtgggcgcg cgcacgtcgg cgacaaaatc
    12961 ggcaagcgta aaatcggttt cgtgtcccac gccactgacg acgggaaccg tgcaggcttc
    13021 gattgcgcgc acgaccggtt cttcgttaaa cgcccacaag tcttcaatgc tgccgccgcc
    13081 gcgacagaca atcaacacgt cgcattcggc gcgttgcgag gcggttttaa tcgcttgggc
    13141 aatttgtaac tcgctgcctg cgccttgaac aggtgtcgga taaacgataa cgggaatttc
    13201 gggcgcgcgg cgtttcaagg tggtaacgac atcgcgcaat gccgctgctg ccaggctggt
    13261 gacgatgccg atacattgcg gacgggtagg caacggcttt ttgcgttccg ccgcaaacgc
    13321 gccttccgcc tgcaactgtg ccttcaaccg ctcgtaggct tcgtaaagct gccccaaacc
    13381 tttgagccgc acctcattca cggtaatttg aaattcgccc cgcgcctcgt aaatactgat
    13441 ttttcctgat acttcgatat ggtcgccttc tttcaaaggc ttcgccaaac gcgccgccgc
    13501 acctttgaac atcgcgcaac gcacctgcgc gcggctgtct ttgagcgaga aataataatg
    13561 tccgctggcg gcacgggtca ggttggacac ttcgcccgca atccacaggc cggcaaggtg
    13621 gttttccaaa agacttttgg caaatgcgtt caactcggaa acggacaaca cgtcagaatg
    13681 aaaaaaatca gacatcgaat caatcaaata ataaaaaata tgaatatgtt ttgaagccta
    13741 aggcggtatt agtccgccta aattgtcaac aatattataa cacgcgccat cttgccgccc
    13801 gccttttccc gtatgacttt tttaagcggg gaatgggaaa aatattcatc aacccgccct
    13861 caatctattc aaattacacc gccgacaagc tatgatgcgg atattttcga caggaggaaa
    13921 aatggatacg caggcagtta tcacacatat tgtccgatgg ttggacgaat acgccgcccg
    13981 ggcaaatgca aaagggtttg tcgtgggcgt ttccggcggc atcgattccg ccgtcgtctc
    14041 cgcactcgcc gcccgcaccg gccgcaccac gctgcttctg gatatgccga tacgccaaca
    14101 ccccgaccag cttgagcggg caaggctgca catccgcaat ctgcaacggc aatatgccaa
    14161 tgtaagcgca caaacggtcg atctgaccga caccttccag acctttgaac aaaccgtcgg
    14221 cgttcatcag acggcatttg acaatcagcc gctttccctc gccaacgcca gaagccgcct
    14281 gcgtatgctg accctgtact actacgggca gatacacgga ctactggtta cggggacagg
    14341 taacaaaatt gaagatttcg gtgtaggatt ttttaccaaa tacggcgacg gcggcgtgga
    14401 catcagcccg attgccgacc tgaccaaaac ccaggtttac cggcttgccg aagcattggg
    14461 cgtggacgag gcgattcaaa aagccccgcc gaccgacggc ctgtgggata cggaacgcac
    14521 cgacgaagaa cagatgggcg caagctatcc cgaactggag tgggcaatgg gcgtgtacgg
    14581 cacgcgcaaa cccgaagatt ttgaagggcg gcagcgcgaa gttctggaaa tctatacgcg
    14641 gctgcaccgc gcgatgcagc acaaaatcaa cccgattccc gtgtgccgca ttccgcccga
    14701 attgttgggc tgaaacgtgg aaatgccgtc tgaagcggaa aaccgtgttt cagacggcat
    14761 tgacatatcc ggctcctatc ccttaagaat cgagtacgcg ggcaaacaaa atatcgtttt
    14821 ccaaatgaat gtggtcgttc aaatcctcca ccatttcttt ggccaaagcg taaagccgcg
    14881 tccagcttcc gcaggctcct tcgggcgctt ggaaattatc ggtcagctct ttgagccttg
    14941 cgatggcgcg gtcgtgttct tcatgttcgt gcatcatcac gctgatgggc atcgccgcac
    15001 cccgaccgac accctgatta atcatcggaa acagcatcct ttcctctttc atcatatgca
    15061 tcagcagttc gttctgcata taggcaagca gctcggcaat ttccgccgga aaggtatcgg
    15121 catgaacttg ggccactttt tgcgccagcg gcaccaattc ttcaaattgt gcacggtgta
    15181 cattgtggta gcgttgcagg atatgatcga cggttgcacc aaagggagca gtttcccaaa
    15241 cggaaaaatc agtcatggca gggttccttt tatttatagg gtttcgggtt tggttttgaa
    15301 cattcatact ttaagaatct atttaaacgg agcatacacc gcccgcgcgc ttctgtacag
    15361 cctcaaacgt attccttaca ttttgataat aaaagtaatt ttcagaaata aaatactgtc
    15421 cgaaccgttt tttagaattt gcaaaggcga ttggggcggt acagaaaaac tattatcccg
    15481 cccgcccact tgaaattttt atgcccaagc cctatcctgc acgctatcgt gccaatccca
    15541 accgaaaagg aaaaataatg agcagcgaat tgattgtaca caccagcgat gccgcttttg
    15601 aaaaagacgt tttaaatgca gatatccccg tcctgctgga cttttgggct ccgtggtgcg
    15661 gcccctgcaa aatgattgcc ccgattttgg acgacattgc cgccgaattt gaaggccgtc
    15721 tgaaagtggt caaaatcaac atcgacgaca acgaagccac cccgtcccgt ttcggcgtgc
    15781 gcggcattcc gaccctgatg gtgttcaaaa acggcgaagt cgtcgccacc aaagtcggcg
    15841 cattggcaaa aggtcagctg accgcctttg tcgaagcctc tatcgcctga taaagcgcaa
    15901 tcgaaaaagc cgccggaaga ttccggcggc tttttcgcac ccttaagatt tgtggcggat
    15961 ttcccagcac ctatggattt ttttgttgcg gaaatcttcg ggaacggatt gtttggaaat
    16021 gtctttgacg gcgtattgtt ccgataccaa gtcgtctaag acgaagctgc gcaggttgtt
    16081 ggaaaagtac aaaatgccgt ctgaagcgag cagcttcacc gcgccgtcaa tcagcttttt
    16141 gtggtcgcgc tggatgtcga ggatgtcgga cattttcttg ctgttggaaa aactgggcgg
    16201 gtccatcaca atgaggtcga accgcctgcc ttccccatat gccgtctgaa gatattggaa
    16261 cacgtcggcg cggacgattt tatgccgttc cgtatcgatg ccgttcaatt caaaattgcg
    16321 tctcgcccaa tcgagataag tgttagacaa atcgacagtt tcgctggatg ccgcgccgcc
    16381 ggtggcggca tagacagtga agctgccggt gtaggaaaac aggtttaaaa aacgtttgcc
    16441 cgccgccgtt tcgccgactt ttttgcgcgt gtttcgatga tccaaaaaaa gccccgtatc
    16501 caaatactta tcaaggttga cccaaaactt gcggccgttt tcggtgatga cgaaatcgtc
    16561 gcccgccttg ccggtttttt cgtattgctg caaacctttt tggcgttcgc ggcgtttgag
    16621 gcggatttgt tcgggcgcaa aaccggtaac gaaggcgacg gcttccaaga cttcggcaag
    16681 ccacgcttcg tattcttcgg gccgcatcag ccagccggta tcgtattcct gaaggtggat
    16741 tcgatcgccg taaacatcgg cggcaaaggg gaattggggg atgtcgcggt cgtaaatgcg
    16801 ccaggcttcg atgccgttgc gtttcgccca tttcataagg tgtttgatgt ttttgcccaa
    16861 gcggttggca aacggtgtga tgtcggtcat tggtttcagg cggaataaag tggaaaacgg
    16921 caattttact gtaattaacg cccgattgct tgaccgtttc gggcaaaccc tataccatcc
    16981 gccgcttatc ttgtcatacg aagccatcgc cttccaacct aaaccgccct tacgggcgcg
    17041 tttcttttgt tgcttgcata tttgccaagc ctttctgtgc aggttgtcgt cgatgtaaac
    17101 cacaagcaag ccgcttgcga caaccctgta acttcacatt ccccgtatcg ttacccttcc
    17161 ctgcttcagg ccgtctgaac ctttcggacg cgggcgttgt tgtcttccaa ggatagccat
    17221 gtctattaaa tttgccgatt tgaacctcga taaaaacatc ttgtccgccg tcagcagcga
    17281 gggttacgaa agcccgacgc cgattcaggc gcaggcgatt ccgtttgctt tggaaggccg
    17341 cgacatcatg gcttcggcgc aaaccggctc cggcaaaacc gccgcctttc tgttaccgac
    17401 tttgcaaaaa ctgaccaaac gcagcgaaaa accgggcaaa ggcccgcgtg ctttggtgtt
    17461 gaccccgacc cgcgaattgg cggctcaagt cgagaaaaac gcgctggcgt atgccaaaaa
    17521 tatgcgttgg ttccgtaccg tcagcatcgt cggcggcgca tcgttcggct accaaacccg
    17581 cgccctgagc aaaccggtcg atctgattgt cgccacgccg ggccgtctga tggacctgat
    17641 gcaaagcggc aaagttgatt ttgaacgttt ggaagtgctg attttggacg aagccgaccg
    17701 catgttagac atgggcttta tcgacgacat cgaaaccatc gtggaagcaa cgccgagcga
    17761 ccgtcagact ttgttgttct ccgccacttg ggacggcgcg gtcggcaaac tggcgcgcaa
    17821 actgaccaaa gaccctgaaa tcatcgaagt cgaacgcgtg gacgaccaag gcaaaatcga
    17881 agaacaactg ctgtactgcg acgatatgcg tcacaaaaac cgcctgctcg accacatcct
    17941 gcgtgatgcc aacatcgatc aatgcgtgat tttcacgtcc accaaagcga tgaccgaagt
    18001 catcgcggat gaattgtacg aaaaaggttt cgccgccaac tgcctgcacg gcgacatgcc
    18061 gcagggctgg cgcaaccgca cgctgatgga tttacgcaaa ggccgctgca aaattttggt
    18121 tgccaccgac gttgccgcac gcggtatcga cgtaccgacc attacccacg tcatcaacta
    18181 cgacctgccg aaacaggcgg aagactacgt ccaccgcatc gggcgcaccg gccgcgcagg
    18241 ccgcacgggt attgcgatta cgtttgccga agtgaacgaa tacgtcaaag tccacaaaat
    18301 cgaaaaatac attaaccgca aactgcccga actgaccatc gaaggcatgg aaccgacccg
    18361 caaacgcaaa tccgcaggcg gtaagccaaa aggcaaaggc ggctggggcg ataggaaatc
    18421 cggcggccgg cgcggcgatc ataaaccggg caaagaaggc ttcggcggca aaacgcgcgg
    18481 cgaaggtttc aagaaagaag gctttaagaa agacggtttc aaaaaaaccg gcgaaggctt
    18541 caaaggcaaa cgtaaagccg gcgattcttt tgcaggcaga ggcgaacgcc gttacaaaga
    18601 ccgctaagcc ccaacctgcc gcataaacca atgccgtctg aaaccgattt cgggtttcag
    18661 acggcatttt tgcaatgttt caacaccgcc cggctttgat acccaaagga ttaggctgta
    18721 ataaaaaccc ttttccgctt tggcaacgat tgaaaatttc cgtaaattca aatatctaga
    18781 ttccttcctg cacgggaatg acacggaagg gtttcagatg cagggtgggc attcctgccc
    18841 acccaatccc gcccttgcaa cggtgggcaa gaatgctcgc cctacggctt gactgttcga
    18901 tatgatgccg tctgaaaacc caacggcggc atgacaatgc caccctgcca acgcacgtaa
    18961 atcagaattg ccatcccgac atcaaacgct tggaaacaaa atgccgtctg aaaatcaaac
    19021 ggcaacataa caatgtccct aacaaatgca aaaatgccgt ctgaaagccc ttcagacggc
    19081 attggcacgc cgggtttacc gcctcctgcc gaaaccgcgc atagcggggc ggcggtaatt
    19141 ggcgggcggg cgcgttgtcg ggcggtaacg ctgcgcctgc gccgcctgtt gttttgcacg
    19201 gaggctgcgc gtgttcaaat ccctgctggt gcgcgcattg ggatgtgcgg actgatggta
    19261 ggctgcacgc gcgcgtcggg cgacgggact gtcttggttg cctgcccgtg tgaatttgtt
    19321 tgccagcgcg ttgccgataa acgcgcctgc cgccgcgccg accaggcttt gcagcagcca
    19381 gcttcctgtc gattggtcgt aaatatactg ctgcccgtct ttaccggtaa cgggttgccc
    19441 gttgttgccg tttgcctgtg cttcggcagg aatggtgtct ttgactgctt cgggagtcag
    19501 ttggtaaacc gtatcgtctg cctgctgtgc gagctgctgt tgcagggctt caatctgttt
    19561 ctgctgctgt tcgagccgcg cctgcgtgtc gtcttggcag gcggcgagtg cgaatgttgc
    19621 gataagcgcg gaggcgatga tttttttcat gtgtgtcctg tttgggtgga aaatcggttt
    19681 tattgtatcg ccgtcgggaa ttttggcaag cattctgccg gcaaatcgtg atgtttacag
    19741 gggcagggtg tgcaatttgc ggacaaatgc gaggctgttg gcgactgggt tgcctttgtt
    19801 ttcgacttcg tgttcggttt ctacggtcag caggcggcgg tttttgtgtt tgttcaggct
    19861 caattcggct tgtgcgggtg tgaaaaacag gcggtgtttt tcggcaaagc ggcgggcgcg
    19921 gctgttggcg gttttcaaaa tctgaagcag cgatacgtcc agatggaagc gtcgcacgcc
    19981 caatacgaga atccgtgcgg caaaaaaatc ggcggcatcg gtaaactcgg cggggctgct
    20041 gcggctgaag tcgtgccgtt cggcggctat cagggcggca acagtgcgga tttgcggaat
    20101 catcgattcg ctgatgagtg tgtcgtcccg ccctgcatcg agaagcatgg gggaaaaatc
    20161 ccgtgcatca tcgacaataa tgctgcaaat gtgcagggtt tcgttttgtg cggcggtttg
    20221 gggcattgca ttcatggtca ttttcctgat tctgtcgtgt gttgccgaat cgggcgacct
    20281 gtgtgaaggt aacaaaaaag ccgccccatt ttcgagcggc ctgttttgcg tatgggatgg
    20341 atttcaagca agcgcaaaaa agtaccgcac gtctgtgtgg taccaatagc aataagcggt
    20401 tgtaaatttt ttgccttgca tgatgaaatg ccgtctgaag ataaaaatat tggggagatt
    20461 ctaaatcaaa acgctgccgc gcctcaagca ttttatcgaa atttttttga tttttcatct
    20521 atccgattga aaatatttcg gtttattttt accgctgccc gatattgtcg gcaatttccc
    20581 tttatctgct ttgaaaaacg gtgcataatc ccgagcaaaa ccgcaatcag gagcaattat
    20641 gcaaaactat ctgaccccca atttcgcctt tgcaccgatg attcccgaac gcgcttcagg
    20701 cagccgcgtt tgggatacgg aagggcgtga atatattgac ttttcaggcg gcatcgccgt
    20761 caatgcgctg ggacactgcc accctgccct tgccgatgct ttaaacacgc agatgcacaa
    20821 gctgtggcac atttccaata tctatacgac gcgtccggcg caggaattgg cgcaaaaatt
    20881 ggtgaagaac agttttgccg acaaggtttt tttctgcaac tcgggcgcgg aagcgaatga
    20941 ggcggcgttg aagctggcaa ggaaatatgc gcgcgaccgt ttcggcggag gaaaaagcga
    21001 aatcgtcgcc tgtatcaaca gtttccacgg acgcacgctg tttaccgtgt ccgtcggcgg
    21061 tcagccgaaa tacagcaagg attatgcacc cctgccgcaa ggcattacgc acgttccgtt
    21121 caacgatatt gccgcgctgg aagctgccgt cggcgaacag acctgcgcgg tcatcatcga
    21181 gccgatacag ggcgaaagcg gcatcctgcc cgccactgcg gaatatttgc aaaccgcgcg
    21241 ccgtctgtgc gaccggcaca atgcgttgtt gattttggac gaagttcaaa ccgggatggg
    21301 gcatacgggc aggctgtttg cctatgaaca ttacggcgtt gttcccgata ttttgagttc
    21361 ggcaaaagcc ttgggctgcg gctttccgat cggcgcgatg ctggcgacag aaacgattgc
    21421 cgccgccttc caaccgggca cgcatggctc gactttcggc ggcaacccga tggcgtgtgc
    21481 ggtcggcagc cgcgccttcg acatcatcaa cgcgccggaa accttgcaca acgtctgcag
    21541 tcaggggcag aaacttcaga cggcattgcg gtctttggga gaacaaacgg gcgtgtttaa
    21601 gcaagttcgc ggcatggggc tgctgctcgg ctgcgtgttg gacgcgcctt atcgcggacg
    21661 cgcatccgaa ataaccgccg ccgccttgaa acacggcgtg atgattttgg ttgcgggtgc
    21721 ggacgtattg cgtttcgcgc cttcgctgct gttggacgat gaggatacgg cggaaggttt
    21781 gcggcgtttg gaacacgtgc tgacggaatt tgccgccgca aaccgcccct aggcatcaaa
    21841 aacaaaaaac cgcttcggaa acgtggttca acgttccgaa gcggttttgt ttgccatcag
    21901 gactcgaaca ccaattccgg ttccttgccc tcttcgatga ctgccttacc gaccaccact
    21961 tttttcaagc cttgcaaatc aggcaggcgg tacatcgtat cgagcaggca gcgttcgacg
    22021 atggaacgca ggccgcgcgc gccggttttg cgctccattg cctgccacgc aatggaacgc
    22081 aatgcgcctt cttcaaattc caactcgaca ttttccatac cgaacaaggc ttgatactgc
    22141 ttgaccaaag cgtttttcgg ctcggtcaaa atattaatca gcgcgtcctc atccagttct
    22201 tctaacgttg caatcacagg caaacgtccg attaattccg gaatcagacc gaatttgatt
    22261 aaatcttccg gttcgacgat gccgaacagc ttggtaatgt cggcattttc gtccttgctg
    22321 tgaacggacg caccgaaacc gataccgcct ttttcagtac gctggcggat gactttttcc
    22381 aagcctgcaa acgcgccgcc gcagataaac aggatgttgg tggtatcgac gttgataaat
    22441 tcctgattcg gatgcttgcg gccgccttgg ggcggaacgc tggccaccgt accttcaatc
    22501 agtttcagca aggcttgttg cacgccttcg ccggacacgt cacgcgtgat ggacggattg
    22561 tcgcttttgc gtgaaatctt atcgatttcg tcgatataga cgatgccgcg ttgggctttt
    22621 tcgacatcga aatcacattt gcccaagagt ttggtgatga tttgctcgac atcttcgccg
    22681 acataacctg cttcggtcag cgtggttgca tctgccatca cgaacggcac atccagtttg
    22741 cgcgccaaag attgcgccag cagggtttta cccgatccgg tcgggccgat aagcaggatg
    22801 ttggatttcg acaattcgac attagctccg gctttcgggt ggcgcaggcg tttgtaatgg
    22861 ttgtacaccg acaccgccaa ggctttcttg gcttgttcct gaccgataac gtggtcgttg
    22921 aggttggcga cgatttcggc gggcgtgggg agcttgccgg attcttccgg ctcccctccg
    22981 gcactttccg aaggcgtgcc gtcatttccg tcttcatgca atatttcaat acagtttgag
    23041 acgcattcgt cacagataaa ggcgttttcg ccctcaatta aatgtttgac gtgtgatttg
    23101 gattttccgc aaaaggaaca ggtacggttt tcgttggaca tggctttctt tacaatgtat
    23161 gcgttacaga aacggcacgc gccgttcggg ttgccaagta taataactat atccgttctt
    23221 atcaatgtat taccttaaaa tcccgccgat tcggctataa tacgcccttt cgcaaccgcc
    23281 ccggcggcaa aaatgccgtc tgaaaccaaa tctgaaatct gaggatattc atgagaaaac
    23341 cccaacgcgg ctatgcccgc caagaccgtg tcaaagaaca aattatgcgc gagcttgccg
    23401 aactcgtccg taccggactg aaagacccgc gcgccggctt cattaccgtc aacgaagtcg
    23461 aagttacccg cgattacagc cacgccaccg tgttctacac cattttaaac caagacgcgc
    23521 gcgaaattac ggaagaagtg ctggaacacg cgcgcggaca cctccgcagc gaattggcca
    23581 aacgcatcaa gctgttcaaa atccccgagc tgcatttcaa atacgacgaa tccttggaac
    23641 gcggtatgaa cctgtccgcc cttatcgacc aagtagcggc ggaaaaaccg gttgaagact
    23701 gacggatatg cccatgccgt ccgaacatcg aaccatgaat acaggcaaac cccaaaaacg
    23761 tgccgtcaac ggtgttttgc tcttggacaa acccgaaggc ctttccagca acaccgcgct
    23821 gcaaaaagcg cggcgtttgt tccgtgccga aaaagccgga cataccggcg tgctcgatcc
    23881 tttggcaacc ggacttttgc ccgtctgctt cggcgaagcg accaagttcg cccaatacct
    23941 gctggatgcc gacaaagcct acaccgccac gctgaaactc ggcgaagcca gcagcacggg
    24001 tgatgccgaa ggcgaaatcg ttgccaccgc ccgtgccgat atttccttag ccgaatttca
    24061 gacggcctgc aaagcattaa cgggcgacat ccgccaagtg ccgccaatgt tttccgcgct
    24121 caagcacgaa ggcaaaccgc tgtacgaata cgcccgcaaa ggcatcgtca tcgaacgcaa
    24181 agcgcgctac attaccgttt acgccatcga tattgccgaa tttgacgcgc ccaaagccgt
    24241 catcgacgta cgttgcagca aaggcaccta catccgcacc ctcagcgaag acatcgccaa
    24301 acacatcggc acgttcgccc acctgaccgc cttgcgccgc accgaaaccg ccggctttac
    24361 catcgcccaa agccacacgc ttgaggcctt ggcaaatttg aacgaaacag aacgcgacag
    24421 cttgctgcta tcctgcgacg tattggtttc acactttccc caaaccgttt taaacgatta
    24481 tgccgtccat atgctccgct gcggacaacg tccgcgtttc gaggaagacc taccttccgg
    24541 cacgccggta cgcgtttaca ctgaaattgg agaatttgtc ggtttggcag aatatcaaaa
    24601 ggaaatatgc cgtctgaaag ccttgcgcct gatgaacacg gcggcatccg ccgcctgaac
    24661 gacggttaaa aatacgggct gtgtttgaat aatgtgttga tatttccgca aaatcccgac
    24721 acactcggac accctccccg cttatcgcaa ctttgcgaac gccccccgaa acagaaaaga
    24781 catcaaagga ttgattttat tagaatttat ttgcaaagcc atttgccgtt acacaagaat
    24841 ggcacattaa aatgactgat gaggatttat aacgatgaag acagtcattc aaaccgaatt
    24901 aacccaagcc ctgctatcac acgaaaaagt atgggcgaac gaagaaaaaa ccattttagc
    24961 caaaaacatt ctgttggatt tggtggaaaa aaccgacccg accattatcg gtttgttatt
    25021 gaataatgat gagttaaaac gccatttctt tgtggaagtg aatggtgttt tggtgtttaa
    25081 attgcaggat ttacgttttt tcttggacaa acacagcgtc aataattcct acacaaaata
    25141 cgccaaccgc attggtttga cggacggcaa ccgctttttg aaagacaatt cggatattgt
    25201 gttggatttt ccgtttaaag attgcgtatt gaatggcgga caaagcaccg aagaaggcga
    25261 agagatttat tttaaacgca gtaatagcca gccagccagc cagccagcca gccagccagc
    25321 cagccagcca gccagccagc cagccagcca gccagccagc cagccagcca gccagccagc
    25381 caattataca ctaaattaac ccgaaaaaga caagaaatct tttttaatca aacgcttgct
    25441 tttgatgaaa tcgatcggct ttttgacgca aaagcattct caaaattctc tcgctatacc
    25501 gcagacggca aacaagcggt tggcgaaatc aaacgtcatt cagacggcac acccgccgaa
    25561 aatctcatta tcaaaggcaa taatctgata gccctacatt cgcttgccaa acagtttaaa
    25621 ggcaaagtga agttgattta tattgatccg ccttattatt ttgttaaaaa gaaacaacaa
    25681 gatagttttg gttataacac taactttaaa ttatctactt ggcttacatt tatgaaaaat
    25741 cgtttatcaa ttgccaaaga attattaact gatgatggga ttattgttat ttccattgat
    25801 gatgacggaa atgcttattt aaagattttg ttagatgaaa tttttggatt tgaaaatttt
    25861 atcggaaatt tacccactat tatgaattta aaaggtaata atgatgaata tgcttttgca
    25921 ggcactcacg aatacacact agtctttgct aaaaataaag ataaatctac tttttatgaa
    25981 tttccaatag atgaagataa ttttttagag aaatgggaag aagatgaaat tgggttttat
    26041 aaaaaaggag ctccaatgcg agcaacagga accgaagata aaagagaaga tagacctgaa
    26101 atgttctatc cttttttggt aaaaaataac acagttagta caattacaga tgaagaattt
    26161 tctcaaatct ataataaaga tttagaagta ttcaatgatg attttattca aaaactaaaa
    26221 gagaaatacg aaaatcttgg atacaatttt attttaccta ttgctgataa acaatggggg
    26281 cgttggcgtt gggggtattc aataaagaat aaggcaaggc tgcagacgga tattattgtt
    26341 agccaatcta aaaatggaat ttccttgtat aaaaaacaaa gacctgaatt agatgattta
    26401 cctacaaaaa aacctaaaac tattttttat aaacctgaat acagtagtgg taatggaact
    26461 gaacagatga aaaatctttt tggtgaaaag gcatttaaaa atcctaaacc agaagaactt
    26521 atccaagatt ttattaccat cacaaccaac gaatccgaca tcgtcttaga ctaccatctt
    26581 ggtagtggca caaccgccgc cgttgcccac aaaatgaacc gacaatatat cggtattgaa
    26641 caaatggatt atattgaaac gcttgccgtt gaacgcttga aaaaagtgat tgatggcgag
    26701 caaggcggta tttccaaagc cgtgaattgg caaggtggcg gcgagtttgt ctatgccgaa
    26761 cttgctccat ttaacgaaac cgcaaaacaa caaattttgg cttgcgaaga ttcagacggc
    26821 atcaaaacgc tgtttgaagg tttatgcgaa cgctatttct tgaaatacaa cgtcagcgta
    26881 aatgaattta gtcaaatcat tcaagagcct gaatttcaat ccttggcatt agacgaacaa
    26941 aaacaaatgg tgcttgaaat gttggattta aatcaaatgt atgtttcatt atccgaaatg
    27001 gatgatgagc aatttgcagg ttgcttaaat gatgacgata aagcgttaag ccgtgaattc
    27061 tatcaatcag caaaaaatca agcggagaaa aaagatggcg aataataaaa cgttatttga
    27121 ttgggtggaa gaccgcaaat caacgctgga agaaatagaa cagacagatt ttttcgcgct
    27181 gcctgaattt gtagaacgca atttaaaata tccgtttttt gaatggcaaa aatcggcttt
    27241 agaaaacttt gtgatttttg accgcgcttc aaaattaaag gatttccctg acatcaaaaa
    27301 ccgccctacc catttgctgt tcaatatggc aacaggtgct ggcaaaacga tgatgatggc
    27361 ggcgttgatt ttgtattatt ttgaaaaagg ttatcggcat tttttgtttt tcgtcaatca
    27421 aaataatatc gtggataaaa cggaaaataa ttttattgac ccggcgcact caaaattttt
    27481 atttaccgag aagattttgc aaggcgacca agttattccc attcacaaag tagaaacgtt
    27541 tagcccacat tcagacggca ttgaaattaa atttaccagt attcaaaaac tgtataacga
    27601 tatccacacc gaacgggaaa accaaaccac attggcagat ttgcacgaat tgaaccttgt
    27661 gatgctgggc gatgaagcgc accatttaaa cgcacaaacc aaaggcaaaa aacaaggcga
    27721 gttggatttg gaagtggaat taaaagccaa tgcaggcgat gccgaatttg aacgcaaagg
    27781 ctgggagcat atggttttgg aattgttgct caataaaaat ggcaatcccg gccaaaatgt
    27841 gctgttggaa tttaccgcca cgccacctga aaaagctgac gtgcaacaaa aatacgctga
    27901 taaaatcatc acaaaatttg gtttaaaaga atttttgcaa aaaggttata ccaaagaaat
    27961 caatttggta tccagtacac tgagcaagaa agagcgggtg ttgcacgctt tattgtttgc
    28021 ttggtatcgc catcaaatcg ctttgaaata tggcattgcc aatttcaagc ctgtgatgtt
    28081 gtttagaagt aagacggttg atgaatcaaa agcggattat ttggcatttt taaattgggt
    28141 agaaaatgtg caagcagatg atttttcgtt tttaaagaca ttttcaatga gcttaaacga
    28201 tagcgataac gccaacgaac aaggcaaaac ccgcaccgaa caagccctaa aatttatgca
    28261 ggaaaatggc tttgagtttg cacatttagc aaattggata aaacaaaatt atcaaaaaca
    28321 caatatcatt attaccaact ccgaaaccaa caaaagcaaa accgaaaaaa ccgacagcga
    28381 aacggaaaaa ttgctaaaca atctggaagc ggttgataat ccgattcgtg ctatttttac
    28441 ggtgggtaga ttaaccgaag gttgggacgt tttaaatttg tttgatattg tgcgtttgta
    28501 tgaagggcaa aacggcggcg gttcaaataa aaaatcatgc aaaacggcaa atacaacggt
    28561 atcagaaaaa cagttgattg gtcgaggcgt gcgttatttt ccattttcgt ttgaagataa
    28621 acagccgaat aagcgtaaat ttgacaacga catgcaacac gaattgcgta ttttggaaga
    28681 attgttttat tacacgcacg atgagcaatc ccgctatatt acagaactga aaaacgagtt
    28741 acgaaaagac ggttatttgc ctgaaaaaga cgatgataag gtattggcaa catttaaact
    28801 caaatctgaa tttgcagata atgaaaattt taaaaactta ttgatttggg cgaataaaaa
    28861 aatccccaat cccaatgcta aaagtaataa tgcagacagc ctaaaagcca atccgcaaac
    28921 actttcattc caaattcacg gcaatcaact gttgcaggaa acgcaattta cagccgataa
    28981 aaatgatgaa aaggtcaagc aacttggcat acaaaataat ttttctcaaa ccataaaaat
    29041 gagtgaaatg gaacggcaca tcttcaataa agcattacat atcaaaggga aaaatagtca
    29101 atctttattc catttcaacc gtttgcaaag caaactcaac attcaaaatc gcaatgaatt
    29161 gcaaaataac ttgttgaaag actggcaaat tgaattttta ggattagagc aagataaaca
    29221 ggttcgcccg gatgataaac ttgcaggctg cctgaaaatc ttggaaatgg ttgaaaagca
    29281 tttgaatgaa agtgataagc catttatcgg tacaaaagaa tttacgccta aaacattatg
    29341 ggaaattttc ggcacgccaa aacaaaaatg ggtcaaaaaa gatgatataa aaactgctat
    29401 tgccatgcaa aatgattggt atgtgatgga taattttgcc ggaacgggtt tggaagaagc
    29461 gttaattcaa tttatttcag cgcgtttggg cgatttgaaa tctcaatatg acattcattt
    29521 aatccgtaac gaagaagtgt ttaaattgaa taactttgac aatggcgaag gatttatgcc
    29581 cgactttatt ttattgctga aagataaaca aaaatcttct tccaatggcg tgaatgactt
    29641 tttgcattac caaattttca ttgagcccaa aggtgagcat ttagtggaaa ctgatggatg
    29701 gaaagaagaa tttttagaag ccatcacagt ggaatatggg atggataaga tcctgcaaaa
    29761 agatacaccg cattatcgtt tgatcggttt accgtttttt actgatcatc agaaaaatgg
    29821 acaatttacg gagtcattcc ctttaggtgc ggcatcgctt gaaaaaatga agtagtgcat
    29881 tgcaggcagc cccgtttgac aaaacttcct ttacaaaagg gcgttttgtc agatatttaa
    29941 tcaacacatt attaaaatac agccaaattt taatgccgtc tgaaccctgt gttcagacgg
    30001 catcgtattt ttcagtatct aaaccgtttc cctaccccaa tccttacccc tcaaaatcga
    30061 ggcatcgaca tcttgaatat cgcggtgtcc cgtaaacgcc atagatatat ccatttcttt
    30121 atacaggatt tccagcgcac gggttacgcc ttcttcgcca tacgcaccca agccatacag
    30181 aaacgcccga cctatcattg tacctttcgc acccaaagcc cacgccttca aaatatcctg
    30241 accgctgcgg atgccgctgt ccatccaaac ttcgatgtcg ctgccgactg cactaacgat
    30301 gtcgggcaag gctttgatgg cagacacggt atcgtcgagc tgtcggccgc cgtggttgga
    30361 aacaatcaat gcgtccgcgc cgcttttcgc tgctttttcc gcgtcttcgg gttccataat
    30421 gcctttgata atcagcttgc cgccccacaa atctttaatg cgcgccacat cgtcccagct
    30481 caggcgcggg tcgaattgtt cggaagtcca tgaagacagc gaagacaaat cgccgacgtt
    30541 cttcgcgtgt ccgacgatat tgcggaacgt gcggcgttcc gtgttcagca ttttcatgca
    30601 ccattccggt ttggtcgcca gattgattaa attggcgatg gtcggtttcg gcggcgcgga
    30661 caggccgttt ttgatgtctt tgtggcgttg acccaaaacc tgcaaatcgg cggtcaatac
    30721 caatgccgaa catttggcat ccttcgcgcg cttaatcagg ttttccataa actcgcggtc
    30781 gcgcatcaca taaagctgaa accaaaatgg tgcggaagtg ttctcggcaa cgtcttcaat
    30841 cgagcagata gacatcgtgg acagcgtaaa cggaatgccg aacttctccg ccgcccgcgc
    30901 cgccaaaatt tcaccgtcgg cgtgtgccat acccgtgaaa cccgtcggcg caatcgccac
    30961 cggcattttc acatcctgcc cgatcatttt ggtttccagg cttcggcctt ccatattgac
    31021 caataccttt tgtcggaagc ggatgtcttt gaaatccgaa gtgttttcac ggtaggtagt
    31081 ttctgtccac gaacccgaat cgatgtaatc gtaaaacata cgcggcattt tgcgcttggc
    31141 aacgcggcgc aagtcttcga tgcaggtcat tttgctcaaa tcacgtttca tttgtcgccc
    31201 cctgaatacc tgaataactt tatatgaaat cgataatgta tatcaatatt gattataagg
    31261 caaatcattt caacatttgc cgcatccgcc gcagctccct actttaagcg acataaggtt
    31321 taaaattcaa aaataacaaa ttaaaatcaa aatattaaaa atcaatcaat ctatcgattt
    31381 aaacagccaa tcacacaatc cgcccccata cttgactgaa acactcagat attggacaat
    31441 tccacccact aataaaaaaa ccgacatggg caaccaccac catgagactg accaccaaag
    31501 ggcgtttcgc cgttaccgct atgctggatt tggcgatgaa cgcgcaaacc ggcgccgtca
    31561 aactcagtgc catcagcgaa cgccaaaaca tatccctctc ctatctcgag caattgttcg
    31621 gcaaactccg ccgcgccgga cttgttgaaa gcctgcgcgg gcccggcggc ggctacatcc
    31681 tcgccgcacc ggcggcacgc atcaacatcg cccaaatcat cgccgccgcc gaagaccggc
    31741 tggacgcaac ccaatgcggc agcaaagcca actgccacca cggcgcgccc tgcctgacgc
    31801 acgatctttg ggagaattta aacaaaacca tcaacgacta cctcggcagc gttaccctgc
    31861 aaagcatcat cgaacagaaa aacaacggcg acggcagccg cgtcgtccaa tttacacaca
    31921 tccattaaat aacacccgaa aaagaaagag caaaccatga ccgtcaaaac ccccgtttac
    31981 ctcgactacg ccgccaccac ccccgttgac aaacgcgttg ccgaaaaaat gattccctat
    32041 ctgaccgaaa ccttcggcaa cccagcctcc aacagccaca gcttcggctg ggaagcagaa
    32101 gaagctgtag aaaaagcacg tgcagacatt gccgccctga ttaacgccga ctctaaagaa
    32161 atcgttttca ccagcggcgc aaccgagtcc aacaacctcg ctatcaaagg cgcggcgcac
    32221 ttctacaaat ctaaaggtaa tcacctcatc actgtaaaaa ccgaacacaa agccgtactc
    32281 gacaccatgc gcgaactcga acgccaaggt tacgaagtaa cttatctgga cgtacaagaa
    32341 aacggtttgg ttgatttaga cgtactgaaa gccgccatcc gcgaagacac catcctcgtt
    32401 tccgtaatgt gggtaaacaa cgaaatcggc gtggttcaag atattcctgc catcggcgaa
    32461 atctgccgcg aacgcaaaat cattttccac gttgacgcag cacaagcatg cggcaaagtg
    32521 cctgttgatg ttgaagccgc aaaagttgat ttgctgtcta tgtccggcca caaagtatac
    32581 ggccctaaag gcatcggcgc gctgtacgtc cgccgcaaac cccgcgtccg cctcgaagcc
    32641 caaatgcacg gcggcggcca cgaacgcggc ttccgcagcg gcacattgcc gacccaccaa
    32701 atcgtcggta tgggcgaagc cttccgcatc gccaaagaag aactcgaaca agatatggcg
    32761 cactaccgca aactgcgcga catcttcctc aaaggcatcg aaggcatcga agaagtctat
    32821 gtcaacggcg acctcgaaca ccgcgccccg aacaacctga acgtcagctt caacttcgtc
    32881 gaaggcgaaa gcctgattat ggcggtgaaa gaactcgccg tatccagcgg ctccgcctgt
    32941 acttctgcca gtctcgaacc cagctacgtc ctgcgcgcgc tcggccgcaa cgatgaactg
    33001 gcgcactcat ccctgcgcat caccttcggt cgcatgacca ctgaagaaga agtgcaattt
    33061 gccgccgaac tgattaaatc caaaatcggc aaactgcgcg aactgtcgcc gttgtgggaa
    33121 atgttcaaag acgggattga tttgaactcg attgaatggg cggcgcatta aagcgtacca
    33181 acatgccatc cgaaccttca gacggcattc caaaaacaaa gcaatcaaga gaaaaatatg
    33241 aacgaacaag atttagattt ggacaacctc gacaacctgc ttgacgattt cgacggcgtt
    33301 accgtggaag gcggcgtcga ttcggaaaac gacgacggct gtgaaggcgg agcgtgcaaa
    33361 atctaactca ggccgtctga aaaccggcaa acaaaccact taaatcatca aaacattaag
    33421 gaaaccacat catggcatac agcgataaag taatcgacca ctacgaaaat ccccgcaacg
    33481 tcggtacttt cgacaaaaac gacgaatctg tcggcaccgg catggtcggc gcaccggcct
    33541 gcggcgacgt gatgcgcctg caaatcaaag tgaacgatga aggcatcatc gaagatgcga
    33601 aattcaaaac ttacggctgc ggttccgcca tcgcttcgtc cagcctgatt accgagtggg
    33661 ttaaaggcaa aagcctggat gacgcgctgg caatcaaaaa cagcgaaatc gccgaagagt
    33721 tggaattgcc gccggtaaaa atccactgct ccatcttggc tgaagatgcg gtaaaagcgg
    33781 ccgttgccga ctaccgcaaa cgtcaggaaa acagataaag cccttcagac ggcatcgtcc
    33841 cgcaatgccg tccgaaccgc ccgccgcttc gggttcgtcc gaggcggtac aacaaggaag
    33901 aaatatgatt acccttaccg agaatgccgc aaaacacatc aatgactatc tcgccaaacg
    33961 cggcaaaggc ttgggcgtac gcttgggtgt gaaaaccagc ggctgctcgg ggatggcgta
    34021 caaccttgaa tttgtcgatg aagccgatgg cgacgacctg attttcgaag gacacggcgc
    34081 acgcatttat atcgacccga aaagcctggt ttatctggac ggcacacaag tcgattacac
    34141 caaagaaggt ttgcaggaag gtttcaaatt tgaaaacccc aatgtcaaag actcctgcgg
    34201 ctgcggcgaa agcttccatg tttaagacat aaaaatggcg ggaccgtatc aaaaccgtcc
    34261 cgccattttt tcgcttcctg cctgttgtag ctgcctttgc cttttctttt ccgttccacc
    34321 ttgtgtcgga acaaatcaga tttcactaag gcttttaaag cattgtcgcg tattttgcct
    34381 ttattgtgct gcactttgcc gcccatattc agtcctttcg tttaagaagc ggcagattat
    34441 aaggcaaaaa cagttttctg ccaaaatctt acatttatca tcctactatg tcccaatatt
    34501 tcaccctctt ccggattgaa cccgctttcg atatcgacac cgaaaacttg gaacaaacct
    34561 accgcgcctt ggccgcccgt ttccatcccg ataaattcgc ttcagcttcc gcctttgagc
    34621 aaaagcaggc agtgatgatg tcttccacca tcaacgatgc ctaccgcacc ttgaaaaacc
    34681 ccatcgaccg cgccgcctac ctgctgaaaa aatcgggcat cgatgccgac gcgccggagc
    34741 ataccgcttt cgcccccgaa ttccttatgc agcaaatgga atggcgcgaa acgctgatgg
    34801 aggcacgggc aggcaacgac cttgaatcct tgaaaaatct cgacaacgaa atccgcgacg
    34861 agcaagaaaa actgttctgc ggtctgaaac agtcgtttgc ccgacaagat tacgacacag
    34921 ccgcacaaca agtccgccaa ggcaggtttc tcgacaaact ccgcaacgaa atttcctcgg
    34981 cattataatc cgcaccgtgt ttcagacggc gtaaccgccg caccgttccg cgtcaaaata
    35041 tgctaaaata agcaacaatt ttttgccata cgaaacattg aaaccatgac cgacgcaacc
    35101 atccgccacg accacaaatt cgccctcgaa accctgccgg taagccttga agacgaaatg
    35161 cgcaaaagct atctcgacta cgccatgagc gtcattgtcg ggcgcgcgct gccggacgtt
    35221 cgcgacggtc tcaagccggt acaccgccgc gtactgtacg cgatgcacga gctgaaaaac
    35281 aactggaatg ccgcctacaa aaaatcggcg cgcattgtcg gcgacgtcat cggtaaatac
    35341 cacccccacg gcgataccgc cgtatacgac accatcgtcc gtatggcgca aaatttcgct
    35401 atgcgttatg tgctgataga cggacagggc aacttcggat cggtggacgg gcttgccgcc
    35461 gcagccatgc gctacaccga aatccgcatg gcgaaaattt cccacgaaat gctggcagac
    35521 attgaggaag aaaccgtcaa tttcggcccg aactacgacg gtagcgaaca cgagccgctt
    35581 gtactgccga cccgtttccc cacactgctc gtcaacggct cgtccggcat cgccgtcggc
    35641 atggcgacca atatcccgcc gcacaacctt tccgataccg tcaatgcctg cctgcgcctg
    35701 ctcgatgcac ccgacaccga aatcgacgaa ctgatcgaca ttatccaagc ccccgacttc
    35761 ccgaccgggg caaccatcta cggcttgagc ggcgtgcgcg aaggctataa aacaggccgc
    35821 ggccgcgtcg ttatgcgcgg taagacccat atcgaaccca taggcagaaa cggcgaacgc
    35881 gaagccatcg ttatcgacga aatcccctat caggtcaaca aagccaagct ggtcgagaaa
    35941 atcggcgatt tggttcgaaa aaaaacactg gaaggcattt ccgagctccg cgacgaatcc
    36001 gacaaatccg gtatgcgcgt cgttatcgag ctgaaacgca acgaaaatgc cgaagtcgtc
    36061 ttaaaccaac tctacaaact gactccgctg caagacagtt tcggcatcaa tatggtggtt
    36121 ttggtcgacg gacaaccgcg cctgttgaac ctgaaacaga ttctctccga attcctgcgc
    36181 caccgccgcg aagtcgttac ccgacgtacg cttttccggc tgaagaaggc acgccatgaa
    36241 gggcatatcg ccgaaggcaa agcggtcgca ctgtccaata tcgatgaaat catcaagctc
    36301 atcaaagaat cgcccaacgc agccgaggcc aaagacaaac tgcttgcgca cccttggcgc
    36361 agcagcctcg ttgaagaaat gctgacgcgt tccggtctgg atttggaaat gatgcgtccg
    36421 gaaggattgg ctgcaaacat cggcttgaaa gagcaaggtt attacctgag cgagattcag
    36481 gcagatgcta ttttacgcat gagcctgcga aacctgaccg gcctcgatca agaagaaatt
    36541 gtcgaaagct acaaaaacct gatgggtaaa atcatcgact ttgtggatat cctctccaaa
    36601 cccgaacgca ttacccaaat catccgcgac gaactggaag aaatcaaaac caactatggc
    36661 gacgaacgcc gcagcgaaat caacccgttc ggtggcgaca ttgccgatga agacctgatt
    36721 ccgcaacgcg aaatggtcgt taccctgaca catggcggct atatcaaaac ccagccgacc
    36781 accgactatc aggcgcagcg tcgcggcggg cgcggcaaac aggcggctgc caccaaagac
    36841 gaagacttta tcgaaaccct gtttgttgcc aacacgcatg attatttgat gtgctttacc
    36901 aatttgggca agtgtcattg gattaaggtt tacaaactgc ccgaaggcgg acgcaacagc
    36961 cgcggccgtc cgattaacaa cgtcatccag ttggaagaag gcgaaaaagt cagcgcgatt
    37021 ctggcagtac gcgagttccc cgaagaccaa tacgtcttct tcgccaccgc gcagggaatg
    37081 gtgaaaaaag tccaactttc cgcctttaaa aacgtccgcg cccaaggcat taaagccatc
    37141 gcgctcaaag aaggcgacta cctcgtcggc gctgcgcaaa caggcggtgc ggacgacatc
    37201 atgctgttct ccaacttagg taaagccatc cgcttcaacg aatactggga aaaatccggc
    37261 aacgacgaag cggaagatgc cgacatcgaa accgaaattt cagacggcat cgaagatgaa
    37321 accgccgaca gcgaaaacgc actgccgagc ggcaaacacg gtgttcgccc gtccggtcgc
    37381 ggcagcggcg gtttgcgcgg tatgcgcctg cctgccgacg gcaaaatcgt cagcctgatt
    37441 accttcgccc ctgaaaccga agaaagcggt ttgcaagttt taaccgccac cgccaacgga
    37501 tacggaaaac gcaccccgat tgccgattac agccgcaaaa acaaaggcgg gcaaggcaat
    37561 attgccatta acaccggcga gcgaaacggc gatttggtcg ccgcaacctt ggtcggcgaa
    37621 accgacgatt tgatgctgat taccagcggc ggcgtactta tccgcaccaa agtcgaacaa
    37681 atccgcgaaa ccggccgcgc cgcagcaggc gtgaaactga ttaacttgga cgaaggcgaa
    37741 accttggtat cgctggaacg tgttgccgaa gacgaatccg aactctccga cgcttctgta
    37801 atttccaatg taaccgaacc ggaagtcgag aactgaaaat catctcccga tgccgtctga
    37861 agattcagac ggcatttatt ttatccctca tccgtcatcc agcttctcac aatatagcgg
    37921 attatagtca attaaaaaca aggggctgtc ctagataact agggaaattc aaattaagtt
    37981 agagttgccc ctatgagaaa aagtcgtcta agccggtata aacaaataaa ctcattgaac
    38041 tgtttgtcgc aggtgtaact gcaagaacga cagcagagtt agtaggcgtt aataaaagta
    38101 ccgcagccta ttattttcat cgtttacgat tacttattta tcaaaacagt ccgcatttgg
    38161 aaatgtttga tggcgaagta gaagcagatg aaagttattt tgctgaacga caaaaccata
    38221 tcaatggaat tgagaacttt tggaaccggg caaaacgtca tttacgcaag tttgacggca
    38281 ttcccaaagc gcattttgag ctgtatttaa aggggtacga acggcgtttt aacaacagtg
    38341 agataaaagt tcaaatttcc attttaaaac aattagtaaa atcgagttta tcctagttat
    38401 ctaggacagc cccaaaaaca aaatagtaca atattcaact ttgaaggtct aaccatggca
    38461 tactctgcgg acttaagaaa caaagcttta aactata
//
LOCUS       DBBZYD010000007        36491 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.007, whole genome shotgun sequence.
ACCESSION   DBBZYD010000007 DBBZYD010000000
VERSION     DBBZYD010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.007"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(231..1295)
                     /locus_tag="ACJJDL_000288"
     CDS             complement(231..1295)
                     /locus_tag="ACJJDL_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HGG7573076.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKAKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAGH
                     QCVANRFTINHTADKLLDAI"
     gene            complement(1296..2054)
                     /locus_tag="ACJJDL_000289"
     CDS             complement(1296..2054)
                     /locus_tag="ACJJDL_000289"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7573077.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2129..2204)
                     /locus_tag="ACJJDL_000290"
     tRNA            complement(2129..2204)
                     /locus_tag="ACJJDL_000290"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2169..2171),aa:Ile,seq:cat)
     gene            complement(2258..3367)
                     /locus_tag="ACJJDL_000291"
     CDS             complement(2258..3367)
                     /locus_tag="ACJJDL_000291"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HGG7573078.1"
                     /translation="MEAQLGAPIEDYAPPKHWTRKQLRSMGRVSYLCVDAAEQALTDA
                     GLLGDESITDGRMGVACGSSSGSTKDIGDVGELLLTGTSRNFSANTYVRMMPHTTAAN
                     IGIFFGLKGRIIPTSSACSSGSQGIGYAYEAIKYGLTDMMLAGGGEEFFSSEVYVFDS
                     LYAASRRNGEPEKTPRPYDANRDGLVIGEGAGIFVLEELEHAKRRGAIIYAELVGYGA
                     NSDAYHISTPRPDAQGAILAFQTALQHAGLAPEDIGWINLHGTGTHHNDSMESRAVAA
                     VFGNNTPCTSTKPQTGHTLGAAGAIEAAFAWGIADRQSNPEGKLPPRLWDGQNDPDLP
                     AINLTGSGSRWETEKHIAASSSFAFGGSNCVLIIG"
     gene            complement(3371..3935)
                     /locus_tag="ACJJDL_000292"
                     /pseudo
     CDS             complement(3371..3935)
                     /locus_tag="ACJJDL_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            3982..4482
                     /locus_tag="ACJJDL_000293"
                     /pseudo
     CDS             3982..4482
                     /locus_tag="ACJJDL_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714696.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            4485..4568
                     /locus_tag="ACJJDL_000294"
                     /pseudo
     CDS             4485..4568
                     /locus_tag="ACJJDL_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            4849..5283
                     /locus_tag="ACJJDL_000295"
     CDS             4849..5283
                     /locus_tag="ACJJDL_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573079.1"
                     /translation="MCGLWLLRALTAKLPQQRYAALFITLFFAAVLVFGRHDSMYWYP
                     VLVNLMMLAVFGGSLFAGQTVIERLARLQQPDLPEKAVRYTRRVTQVWCVFFIANGTL
                     AALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYRKLVLKV"
     gene            5290..5805
                     /locus_tag="ACJJDL_000296"
     CDS             5290..5805
                     /locus_tag="ACJJDL_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HGG7573080.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENAVYF
                     GMICNRLPSYESDTFGLHCNVVTQPDGQRPLLQLHQSGGHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            5825..7303
                     /gene="ubiD"
                     /locus_tag="ACJJDL_000297"
     CDS             5825..7303
                     /gene="ubiD"
                     /locus_tag="ACJJDL_000297"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HGG7573081.1"
                     /translation="MKYKDLRDFIVMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEG
                     SALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTSYP
                     VSVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVDNTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWGELGL"
     gene            complement(7368..9482)
                     /locus_tag="ACJJDL_000298"
     CDS             complement(7368..9482)
                     /locus_tag="ACJJDL_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HGG7573082.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAIGLHASVYRILTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDRTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKDHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            9573..10466
                     /locus_tag="ACJJDL_000299"
     CDS             9573..10466
                     /locus_tag="ACJJDL_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HGG7573083.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVCIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            10606..11457
                     /gene="folP"
                     /locus_tag="ACJJDL_000300"
     CDS             10606..11457
                     /gene="folP"
                     /locus_tag="ACJJDL_000300"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HGG7573084.1"
                     /translation="MARHVWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLAEVAGWGVPISLDTRR
                     TVIMEKALALGVVDIINDVAALTDKGAVELLARQADTGICLMHMQGLPENMQINPKYQ
                     DVVGEVVRYLKERAAECIAAGIAPQRITLDPGFGFGKNLQHNIALMRHLPELMAETGF
                     PLLIGVSRKSMIGELTGEADAAARVHGSVAAALASVARGAQIVRVHDVKATADALKAW
                     EALGINL"
     gene            11587..12921
                     /gene="glmM"
                     /locus_tag="ACJJDL_000301"
     CDS             11587..12921
                     /gene="glmM"
                     /locus_tag="ACJJDL_000301"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HGG7573085.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEANYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMENALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIGKGQNWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            13110..13793
                     /locus_tag="ACJJDL_000302"
     CDS             13110..13793
                     /locus_tag="ACJJDL_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG7573086.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            13860..14849
                     /locus_tag="ACJJDL_000303"
     CDS             13860..14849
                     /locus_tag="ACJJDL_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HGG7573087.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGVIAEWDETQGWYNLRIPSQDAAAVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSQGWGKEEVEKELARLKL"
     gene            14964..15743
                     /locus_tag="ACJJDL_000304"
     CDS             14964..15743
                     /locus_tag="ACJJDL_000304"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG7573088.1"
                     /translation="MNFTDTHCHLADAALRENLPHILTAAREAGVGRFIVPATRPQDW
                     QDVADLAQRLSENPLWGNIHIALGIHPWFSDDVSEPDFQLLEQTLKAHPTAWVGEIGL
                     DFYDKTQTPPQRERQIQVFVRQLEIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGI
                     VHAFSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLK
                     KEINTPANIPGIAKIAAEIRGTCVEEIAKVTERNADALLGR"
     gene            15847..16923
                     /gene="prfA"
                     /locus_tag="ACJJDL_000305"
     CDS             15847..16923
                     /gene="prfA"
                     /locus_tag="ACJJDL_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HGG7573089.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYQLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLP
                     KDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PVDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            17048..18046
                     /locus_tag="ACJJDL_000306"
     CDS             17048..18046
                     /locus_tag="ACJJDL_000306"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HGG7573090.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAHDPFCNPEAEKIGGRYVDLDELYAQSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQIGDCGNAVRADG"
     gene            complement(18124..19419)
                     /gene="serS"
                     /locus_tag="ACJJDL_000307"
     CDS             complement(18124..19419)
                     /gene="serS"
                     /locus_tag="ACJJDL_000307"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HGG7573091.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            19585..20109
                     /locus_tag="ACJJDL_000308"
     CDS             19585..20109
                     /locus_tag="ACJJDL_000308"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HGG7573092.1"
                     /translation="MLDREGYRPNVGIILTNNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIIGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQPSGNR"
     gene            20176..22161
                     /gene="parE"
                     /locus_tag="ACJJDL_000309"
     CDS             20176..22161
                     /gene="parE"
                     /locus_tag="ACJJDL_000309"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HGG7573093.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDEHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(22235..22639)
                     /locus_tag="ACJJDL_000310"
     CDS             complement(22235..22639)
                     /locus_tag="ACJJDL_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HGG7573094.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAEAAGSSAAE"
     gene            complement(22731..23831)
                     /gene="aroC"
                     /locus_tag="ACJJDL_000311"
     CDS             complement(22731..23831)
                     /gene="aroC"
                     /locus_tag="ACJJDL_000311"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HGG7573095.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFGSVVQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIHVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            23974..25062
                     /gene="trmA"
                     /locus_tag="ACJJDL_000312"
     CDS             23974..25062
                     /gene="trmA"
                     /locus_tag="ACJJDL_000312"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HGG7573096.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFDAASEAVNCLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKKLGDAWQQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSVSAAQWNIEANRIGNIKIARLSAEEFTEAYTRKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEQTLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTPHIESSVLLKKKIL"
     gene            25083..26276
                     /locus_tag="ACJJDL_000313"
     CDS             25083..26276
                     /locus_tag="ACJJDL_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HGG7573097.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVSRAETARAAAPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEAELVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFAYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(26341..26416)
                     /locus_tag="ACJJDL_000314"
     tRNA            complement(26341..26416)
                     /locus_tag="ACJJDL_000314"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26381..26383),aa:Arg,seq:ccg)
     gene            26701..27540
                     /locus_tag="ACJJDL_000315"
     CDS             26701..27540
                     /locus_tag="ACJJDL_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HGG7573098.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            complement(28006..30858)
                     /gene="gcvP"
                     /locus_tag="ACJJDL_000316"
     CDS             complement(28006..30858)
                     /gene="gcvP"
                     /locus_tag="ACJJDL_000316"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HGG7573099.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNMINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDERVYPQTLDVMKTRAKYFGFELVVGDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVSADIMSLVLLKPPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDAFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIAKRIHALASAFADALVSDGIKVVHKVFFDTVTVDFGSK
                     EKTDQVFAAALESGYNLRRVNDTQVAAAFHETSTREDLVDLYRAFTGKDTFAFADDVK
                     GRLNAELLRQNDILQHPVFNSYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTAGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLSIRRYQEANGEGHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIVHENGGQVYMDGANLNAQIGIM
                     QPAKVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHTLTDTHSASADQT
                     AVAAAAYGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLGEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKSIRREVQKVIDGEWPKEDNPLVNAPHTASDVTGEWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(30889..31248)
                     /locus_tag="ACJJDL_000317"
     CDS             complement(30889..31248)
                     /locus_tag="ACJJDL_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573100.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRCANLMAVLPL
                     FVVILVLLNIVFPLPAHPLAWLVPAGFMVLVGGFPLSLPLAVLLVLTCCILAHCPPLS
                     RLLCYPCPNHPMSKNSA"
     gene            31247..31471
                     /locus_tag="ACJJDL_000318"
     CDS             31247..31471
                     /locus_tag="ACJJDL_000318"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HGG7573101.1"
                     /translation="MPSEPAGRLFQKMPYRCNFMRLYGVGFALQTAYASRSSLVSQSV
                     HDYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            complement(31523..32164)
                     /locus_tag="ACJJDL_000319"
     CDS             complement(31523..32164)
                     /locus_tag="ACJJDL_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HGG7573102.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(32154..32705)
                     /locus_tag="ACJJDL_000320"
     CDS             complement(32154..32705)
                     /locus_tag="ACJJDL_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HGG7573103.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDIDTVAAFGEADIERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(32709..33227)
                     /locus_tag="ACJJDL_000321"
     CDS             complement(32709..33227)
                     /locus_tag="ACJJDL_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HGG7573104.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(33227..34888)
                     /gene="pqiB"
                     /locus_tag="ACJJDL_000322"
     CDS             complement(33227..34888)
                     /gene="pqiB"
                     /locus_tag="ACJJDL_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HGG7573105.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTLLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     DLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN
                     GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(34881..36341)
                     /locus_tag="ACJJDL_000323"
     CDS             complement(34881..36341)
                     /locus_tag="ACJJDL_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HGG7573106.1"
                     /translation="MGSAVGGQPLEKIFLPDDKGLFILPNLPVLHPDWVYRLFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPRLDSGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKRVYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDGAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     SARFALPAGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGMAFNETEKHD"
BASE COUNT         8270 a         9399 c        10288 g         8534 t
ORIGIN      
        1 gtactggttt ttgttagtct actatacatt gtaacaaagc acttgatgcg gcagcacaag
       61 ccggggaaga cgctgcaaaa ctttgccaat aggctgcgta atatcggggg atattgggat
      121 tttcttattt ttaaggatgg attcggggtg tttctttcca atgaacgaat ataatttggc
      181 ggtttgttgc atcaaaggct ttcagacggc atatgccgtc tgaaagcagt ttatattgca
      241 tccaataatt tgtcggcggt atggttgatg gtaaaacggt tggcgacgca ttgatgtcct
      301 gccgttgcca gtgcgttttt cgtttcaggg ttcaagacga ggcgttcgat ttcgtccgcc
      361 aaagattcag gtgtcagcct gtccagcaga atccccgatt gatgatgttc gataatttcc
      421 ttttgcgccc ccaaagtatt ggaaatcacc gccgttcggc agtacatcgc ctcgcataat
      481 gacaaaccga atgcctccgg gacgaggctg ggcaaaacca cgacatcgct ttggcggtaa
      541 aacgaagcaa gtttttcggt aaacccttca aaagaaacaa atggttctgc tcctgaagca
      601 gatacgtccc gcttcaggcg gcacatataa tccggatgtc cgtcccctgc caatttgagc
      661 ctgatttgag gatatttccg atgcagtatc acacaggctt caatcaggtt ttccaatcct
      721 ttttctggac tgatcctgcc ggcgtaggcg acggtaaaaa aacggctgtc gggtttttct
      781 tgagagggag ggaaacggcc ggtatcgata ccgttatgaa caatccggta ttttgcttta
      841 aagggattgt cggcggtttg cacatcgtaa accagacggg aaacgcaaat aaagcggtct
      901 gtgtttttct gtatcaggcg gtggtaaaaa tcggttttgt tggcgacgac attatgtttg
      961 acaaatatca ggcgcacccc ggtcagtttt ttcaaaagta tggataaggc ggcaattttg
     1021 ccggtgtgta tcatcaggtg ggaaatgcgg tttttccgga taaagcgggt aagcgcgcag
     1081 agcgaaaaca gcccgttgag cgtgtgaagg cgcgttgtga aaacggaaga aacttcggaa
     1141 aaacgtctgt gcatcaactc attattttta ttgacggcgg taaacatcgt gcaaccccga
     1201 agccccaatg cttttgaaac atcatagaca tactgttcgc ccccgcccca aatcttggcc
     1261 gatacgatat ttaatatcct gaattctttt tccatttaaa attttccgcc agatttgtac
     1321 agataatata gtttgacata tttaatcatc gtgtaatagc tgtggttgac ggacataatc
     1381 caacccattt ttccatcgag aaaccctttg ttcaggatat aaattttgaa aaaaccccaa
     1441 atcgggcgga ggataatgtc cctaacgaaa cgcacgggct ttccctgctc tcggtatttc
     1501 tcggctgaga tggaagtgta tttgttgaat ttgttgaaat attgttccca gttgtcgtat
     1561 gtgtaatggt acataaaatg cttcagacgg cgtttggggt agggggtttg tacggtttcg
     1621 tgtactttgc cttgcaccga actgtctttt ttcggcatca gacggcatac gctgtcggga
     1681 cgcatcgcgc cgtgtgtggc gggatggttg gggaaaaggt tgcggcgttc gacaaaatag
     1741 gcggcataat cgccggtttg gacaattttt gagatttcat cagatagttc cggcgtgcag
     1801 cgttcgtctg catcaatcag gaaaacccat tctccgcctg cctgttcgat ggcaaatgtt
     1861 ttttgcgctc cgaaatcccc gttcaaatgc cgtctgaaga cttttgcacc caaaccctcg
     1921 gcaatttcgg cagtattgtc ggtgctgtgg tcgtcaataa cgataacttc tttatcgaaa
     1981 cggcaacttt caatacattc ccgaatgtgg tttgcttcgt ttttggcaac aatcaatacg
     2041 ctgacttttt tcattatcaa ggtttctcaa agcattttgg tttcacaggg cggcaaaaaa
     2101 gcccaaacat acgtccgggc ttgggaattg gtgggtccgg tggggttcga acccacgacc
     2161 aagggattat gagtcccctg ctctaacccc tgagctacag acccgtcaag agtaggcgcg
     2221 tattgtatag catagcggtg ggattgacaa acttatttca tccgatgatt aagacgcagt
     2281 tgcttcctcc gaaggcaaac gacgagctgg cggcaatgtg tttttcggtt tcccagcggc
     2341 tgccgctgcc ggtcaggttg atggcgggca ggtcggggtc gttctgcccg tcccaaagcc
     2401 ggggcggaag tttcccttcg ggattgcttt gccggtcggc aatgccccac gcgaacgcgg
     2461 cttcgattgc gcccgccgcg cccagcgtgt gtccggtttg cggcttggtg gacgtgcagg
     2521 gcgtattgtt gccgaaaacc gctgcaacgg cacggctttc catactgtcg ttgtggtgcg
     2581 tcccggtgcc gtgcagatta atccagccga tgtcttcggg cgcaagacct gcgtgttgca
     2641 atgccgtctg aaaggcaagg attgcgcctt gcgcgtcggg gcggggcgtg gaaatatggt
     2701 aggcatcgct gttggctccg tagccgacga gttcggcgta aattatcgca ccgcgccgtt
     2761 tggcgtgttc caattcttcc agcacgaaaa tccccgcgcc ttcgccgatg accagcccgt
     2821 cgcggttcgc gtcgtatggg cgcggggttt tttccggttc gccgttgcgg cggctggcgg
     2881 cataaagcga gtcgaaaaca tacacttcgg acgagaaaaa ttcttcgcct ccgcccgcca
     2941 gcatcatatc ggtcagaccg tatttgatgg cttcgtaggc ataacctatg ccttggctgc
     3001 cggacgaaca cgcgctcgat gtcgggatga tgcgtccttt cagcccgaaa aagatgccga
     3061 tattggcggc ggtggtgtgc ggcatcatac gcacataggt gttggcactg aagttgcgcg
     3121 acgtgccggt cagcaacaat tcgcccacat cgccgatgtc tttggtgctg ccgctggaag
     3181 agccgcaggc aacgcccatc cgtccgtcgg taatgctttc gtccccgagc aaaccggcat
     3241 ccgtcaaagc ctgctccgcc gcatcgacgc acaaatacga cacacgcccc atacttctga
     3301 gctgcttgcg cgtccaatgt ttcggcggcg cgtaatcctc aatcggcgca cccagttgcg
     3361 cttccaattc ggggaaacgt tcgtgccaat ccactatatt ttcgcaagac gcgttttgcc
     3421 tgattccaaa agttctcaat gccgttaatg tggttttgac ggtctgcaaa ttccttggaa
     3481 tggttgatgc ggtaatggat aaaactgctc acgtccaact tgtcgcagct gctcagacta
     3541 tcggtataaa caatactgtc cggcatgatt ttctttttga tgacagggag taacgtttca
     3601 gacttggcat tgtttacgac aacggtatag acccgtccgt tgcgtttcag aatgccgaaa
     3661 acaaccactt ttcctgccgc accgcgacca cgtctgcctt tacgccgtcc gccgaaatcg
     3721 ctttcgtccg gctcgacagg atcctcaaaa acctcatcgg cagccaagac caaatgatgg
     3781 ttgataaccg tgcggatttt acggtagaac agtgctgccg aattgggatg gatacccaaa
     3841 atatcggcgg cagaacgggc ggtaacttcc agtacaaaaa aatggagcag ttctttctgt
     3901 acttttttct ttaatttgca gtgtgttatc ttcatatttc gagggtaaca tatctgctaa
     3961 tctagtaaaa tttaatccac tatagtttat gcctcgcacg acggggaaat ggcgcgcagt
     4021 ttcgatttgt ggttggaact gttgaaatcg caaatcgtgt cgccgacttc gttcggtttg
     4081 tcggtgcaca atgcaacggc ggggtaatgg tcgatattga ggcgggatat gagcgagcag
     4141 acggcattgg ccgtgtgtgc cgacggtgtg gaaacggcat tggcggaagc ggcatcactg
     4201 ttggaagagg gatgcgggtc ggttttggtt ttggcggcgg acgatccgct gccggaagga
     4261 tatgccgtat cggcaacgcg cgcgccgttt gcttatgctt tggcgatggt tctgaccaaa
     4321 gggacgcgtt acagcctgac tttatctgct tcggacgata tgccgtctga agccggtatg
     4381 ctgcccgagg catattggag cggtttggaa tgggtgcgct ttctgctgaa cggcagtcgg
     4441 gaatgccgcc gggtatatcg caatcgtgaa tggctgtggc agcccgcaag ctgcaggctg
     4501 aagatttccg caatgtccgc accgtcaacg acgtggtaca ggcggtattg aagattcagg
     4561 cgggctaatc gggtatttct aattattttt cagacggcat gtttttatcg gatgccgtct
     4621 gaaaacattt gtgcggattc aaaatgaaac ccggtttttt cggacatatt tttctgaccg
     4681 tattaagcat tgcctatccc gctttgtggt atagtggatt aacaaaaatc aggacaaggc
     4741 gacgaagccg cagacagtac ggcaaggcga ggcaacgctg tactggtttt tgttaatcca
     4801 ctatattacg gcagggaggc gggctggttt gtctggctgg cggcggcgat gtgcgggttg
     4861 tggctgctgc gcgccctgac tgccaaactg ccccaacagc gttatgcggc tttgtttatt
     4921 acactgtttt ttgccgcagt attggtgttc gggcggcatg attcgatgta ttggtatccc
     4981 gtcctcgtca atctgatgat gttggcggtg ttcggcggca gcctgtttgc cggacagacg
     5041 gtcatagaaa ggctcgcgcg gctgcaacag cccgacctgc ctgaaaaagc tgtgcgctat
     5101 acccgccggg taacgcaggt ttggtgcgta ttctttattg ccaacgggac gcttgccgct
     5161 ttgttggccc ggttggggcg atatgattgg tgggcggttt atacaggcgt gattgcctat
     5221 gtattgatgg ggatgctgtt tgccggcgaa tggctttacc gcaaactcgt tttgaaagtc
     5281 tgaaacctta tgtacacttg cacttcctgc ggcgaaaaac atgaagatat gcccgcaatc
     5341 ggctttaccg cccccgatcc ctataatcaa ctcagtgaag aagaacgcat tgcttatcaa
     5401 gcagaatgcg attctgattt ctgcatcatc cgctatcccg accaaaccga ccgctttatc
     5461 cgcgcggtgc tgccgattcc gattatcggg catgaggaaa cgctggaata tggcgtgtgg
     5521 gtgtccgtca gcgaaaagag ttttaacgac tatcaaagcc actttcacga caatccggaa
     5581 aacgccgttt atttcggcat gatctgcaac cggctgccct cttatgaatc cgacaccttc
     5641 ggtttgcatt gcaatgtcgt tacccaaccc gatggtcaac gccctttgct gcaacttcat
     5701 caaagcggcg gacatccgct ggtacgcgac ttttatcacg gcatagaata tgccgaagca
     5761 caggcaagga taggggcggt atccgaatcg gattgttcag gataaaagga caaaaaggat
     5821 aaatatgaaa tacaaagacc tgcgcgactt catcgtcatg ctcgagcagc aaggcaaact
     5881 caagcgcgtc gcccaccccg tttccccgca tttggaaatg accgaaatcg ccgaccgcgt
     5941 gctgcgtgcc gaagggtcgg cgttgttgtt tgaaaacccg attaagcccg acggtacgcg
     6001 ctacgattat cccgtgttgg caaacctgtt cggcacgccc gaacgtgtgg cgatgggcat
     6061 gggcgcggac agcgtgtcca agctgcgtga aatcgggcag acgctggcgt atttgaaaga
     6121 acccgaaccg cccaaaggca tcaaagatgc gttttccaaa ctgccgctac tgaaagacat
     6181 ttggagcatg gcgccgaacg tggtgaaaaa cgcgccgtgt caggaaatcg tgtgggaagg
     6241 cgaaaacgtt gatttgtata aacttccgat tcagcattgc tggccggaag acgttgcgcc
     6301 gctggtaaca tggggcttga ccgtaacgcg cgggccgcac aaaaaacgcc aaaatctcgg
     6361 catttaccgc caacaactca tcggcaaaaa caagctgatt atgcgctggc tgtcgcatcg
     6421 cggcggcgcg ttggattatc aggaattccg caaactcaat cctgatacgt cgtatcccgt
     6481 ctccgttgtg ctcggctgcg accccgccac cattttgggc gcggtaacgc ctgttcccga
     6541 taccttgagc gaataccagt ttgccggact gctgcgcggt tcgcggacgg aactggtgaa
     6601 atgtatcggc aacgatttgc aagtgcccgc acgtgccgaa atcgtactgg aaggcgtcat
     6661 tcatccgaac gaaaccgcgt tggaaggccc atacggcgac cacacgggct attacaacga
     6721 gcaggattat ttccctgtgt ttacggtcga acgcattacc atgcgcgaaa acccgattta
     6781 ccattcgacc tacacgggca aaccgcctga tgagcctgcc gttttgggcg tggcgttgaa
     6841 cgaagtgttc gtaccgcttt tgcaaaagca gttccccgaa atcaccgatt tctacctgcc
     6901 gcccgaaggc tgctcctacc gcatggcggt ggtgagcatg aaaaaacagt acgccggaca
     6961 cgccaagcgc gtgatgatgg gctgctggtc gttcctgcgc cagtttatgt ataccaaatt
     7021 catcatcgtg gtggatgacg atgtgaacgt gcgcgactgg aaagaagtca tctgggcggt
     7081 aaccacgcgc atggaccccg tgcgcgacac cgttttggtg gacaacacgc ccatcgacta
     7141 cctcgacttc gccagccccg tcagcggact cggcggcaaa atgggtttgg atgcgaccaa
     7201 caaatggccg ggagaaaccg accgcgaatg ggggcgcgtc atcaaaaaag accctgcggt
     7261 tacggcgaag attgatggga tttgggggga attgggcttg taggttttac ggcaatgccg
     7321 tctgaagcgc gagggcgttt cagacggcat ttttgtacgc aggatgttta cggttcttta
     7381 ggtttgagcc actgccattg ttccagcagg gtgtcttcga ggattttctg tttctctttg
     7441 cgcgaattga tgccgccggt cagcctgccg taatcgacgg taatggacgg cttgtccacc
     7501 gtaccggtga ttttcagggg aatcggtttg tttttcggat ggacggcgtt gcggataagg
     7561 acatcttcag acaattcctg cgtatccaga ttggtatagc cgttgctggt aacatagagg
     7621 ctgtcggaga agagttcggt atcgatgtgg cggctgatgc cgtctgaaat ttcgctgttg
     7681 agcgtgaatc ggtggaaggg tgtgctgggt gcggcattgt cggcagtttt gcccgaaatg
     7741 ccgtttttca ggatattgtc catgtcgata ccgtgccatg caccgttgga aatatttagc
     7801 gacaggctgc cctgaagcga gcggataagc tcttttcggg tttcgccgcc cgcggtcagg
     7861 tcgatgaccg cgtcgccgtt gccgctgaag ctgtggaagc cgaacaggtc ttgcagcagc
     7921 ggttggattt ggatgttgct tgcattctgt tgcaggcggt aagtggcggg acgggtgttg
     7981 gcgatgctga tgccgccttc ggtatggccg ccgtaaagcc ctgacttgaa acggctgagc
     8041 gcgatatggt ctttgtcggc gtggaggtag gtttccatat cgtccagttg caggccggga
     8101 agttggactt ttccgatttt caggtgcgcc tcgatgtcgc cggacagctt ggcgagggtg
     8161 tcgggaaata ttttgccgtt ttgttgccgc acgtcgtcaa gatagggggt caggttcaat
     8221 ttttgcagtg cgacggcggc ttccagatgc ggtgcgtctt catgtgtgta tctgaatttc
     8281 gcggcaacgg tttggcggtc gaatgtgccg tttaattcgg cattccaatt ttgcagattc
     8341 ggtacggaca gcgaaccgtc gagccggctg atgaaacggg gttgcggcag gcggttgacg
     8401 gtatcctgaa gggtcgatac atacaggcgc ggcgcgtcca gccctttgtt ttccgtccat
     8461 acgagcggcg aattgaggga gaagttggtc tggtggcgcg gtgttttgaa gctgccggag
     8521 atttcggcgt tgccgatgtt ggcgatgccg gagtgcaggt tggctttgtc gagtttgaac
     8581 gaaccgtccc atcgggcata ttcgccgccg gcggtaaatg cgccgttgac ggtttcaatt
     8641 ttaatgctgt tatttctgag tgccagcgta gggatttggg cggtcaggtg gaggttgcgg
     8701 aaggaagtgt ctgcacgcag gccgaggccg gcggcatccg ctccgccggc gttgaagcgg
     8761 acagaagggc tgccggtggt ggaaatggta atgccgtgtc cgtccagcga agtggaagct
     8821 tcaaaatgga acggtgagat tttgggcgtg ccgatgccgt ctgaaaggaa cagccccctg
     8881 cttttccacg ggacggacag ctttccccaa accagtatgc ccgaactttc aaacggctgc
     8941 cccgacgaat cgggggattg caggttgagg ttgatttcct tcaggataag ctgttcctgc
     9001 aggaaattga ggcggacggt gctgttttcg acgataatgc ggttgactga ggcttggcgt
     9061 ttttggctgt cgatcaggtc ttggatgttc caaacacctt tcccgtcgcg cgtcagggca
     9121 agttccgcac tcgaaaccac ccatttttca atctgtatct gatccgacca caggtttttc
     9181 cagctcaatc cgattttggt ttcttggacg gaaacggcag tccggtcgcc gccgggttcg
     9241 gtaatggtca ggtttttcag gatgacggtc ggccggggca ggagcctgcg ctgaatgtcc
     9301 gcatcaaacg agattttccg gtgcgtatga gcaatgcttt gttggaggcg gcttctgatg
     9361 ttttcaggtg tgaggatgcg atatacggaa gcgtgcagcc cgattgccgc caaaagcagt
     9421 atcgtcagca cggccaccgc atatttcaga cggtatttgt ggaaaaccga taataaatcc
     9481 atagcccgaa caatctgtaa aacacgccac agtataacac ggcttgcaaa aatcctattt
     9541 tgggcaggcc gtttcttgtg tcaggaggaa atatgattat tgtcatgagc aggcgtgccg
     9601 ccgaagcgga cattgccggc gttgtcgcct ttatccgcag cagaggtctg cgagaacaca
     9661 tttctcacgg cgacgagcgt accgtcatcg gcgcaatcgg cgacgatagg gttttgagcg
     9721 tcagggaggt gcagacgctg ccggaggtcg agaaagccgt ccgcattttg gatacatgga
     9781 aaaccgtcag tcgggaaaat cgggcggaag acagccgcgt tgccgccaaa ggcgtggctt
     9841 tcggcggcgg ggaaaccgtc tgtatcgccg cagaaccgtc agtatggcgc aatgcggatg
     9901 cagtgtttct agatccgttt ttcacttcgg caaacttata cgacacttca agtgcggatg
     9961 aagggcgagg acggtgcaga cggttggcgg aacagaccgc atcggcgcat ggcgcaggga
    10021 aacccgtatt ggtgcgcgtc cgcaacgtcc gccatgtcga agcggctttg aatgcggggg
    10081 cggacatcct gtatttgggc ggcgggctga tgtccgatct tgccgtattg aatgaagccg
    10141 gaagcctgaa cattcccttg gtgctgtgta aagacaagca ccattctgcc gaagattggt
    10201 tgaatgccgc agaatatgtt gtctcgcgcg gcaaccgcca cctgattctg ggcgagtcgg
    10261 gcgtgttgag ccataccaaa gaccatccct accgtttgga tgtcgaatcc atcgtgaaag
    10321 tccgccaaat cagccatctg cccgtgattg cgaatattac gggattatgg aaccgcgata
    10381 tgccgcagga aatcctgtac ggcttggcaa aggcggcagg cgcgtgcgga atcgtcggaa
    10441 cctgttttga aaagtcgggc ggatagcagg cataccggca gattcaaagg cggagcagac
    10501 attcggacaa catgccgtct gccgcccgaa tagcggtgcc gtctgaagcg cacaagacgg
    10561 tttcagacgg catataatct gttttttatt ttgggaggag ttcagatggc acgacacgtt
    10621 tggcaggcag gacggtttga aatcggtttg gacaaaccga aaatcatggg tatcgtgaat
    10681 ctcacgcccg attctttttc cgacggcggc gcgtattcgc aaaatgccca aacagctttg
    10741 gcgcacgccg aacggctttt gaaagagggt gcggacattc tcgacatcgg cggcgaatcg
    10801 acgcggccgg gtgcggatta tgtttcgtcc gaagaagaat gggcgcgggt tgagcctgtg
    10861 ttggcggaag tagcagggtg gggtgttccc atcagtttgg acacgcgccg tacggtgatt
    10921 atggaaaaag cgttggcact cggtgtcgtc gatattatta atgatgtggc ggcgttgact
    10981 gacaagggcg cggtcgaatt gctggcgcgt caggcggaca cgggcatttg cctgatgcac
    11041 atgcagggtt tgcccgaaaa catgcagatt aatcccaaat atcaagatgt ggtcggcgaa
    11101 gtggtgcggt atttgaaaga gagggcggcg gaatgtatcg cggcaggcat cgctccgcaa
    11161 cgcatcacgc ttgatccggg tttcggtttc ggcaaaaacc tgcaacacaa tatcgcgctg
    11221 atgcggcact tgcccgaatt gatggcagaa acgggtttcc cgctgctgat cggtgtgtcg
    11281 cgcaaaagca tgataggcga gctgaccggc gaggcggacg cagcggcgcg cgtacacggc
    11341 agcgtggcgg cggcgctggc ttccgtagcg cgtggcgcgc aaatcgtgcg ggtgcatgat
    11401 gtgaaggcga cggcggatgc gttgaaggcg tgggaagcgt tgggcatcaa tctgtaaaca
    11461 gcggttcgca tacttcatgc cgtctgaaaa ggacggggcg gcttcagacg gcatcaacgg
    11521 tgcagacagc agggcacaaa cagactgtat aatctcggac aacggttcac attctcggag
    11581 caacacatgg caaaaaaata tttcggcacg gacggcgtgc gcggcgaagt cgggcagttt
    11641 ccgattacgc ccgattttgt attgaaactc ggctatgcgg cggggcaggt tttggtgcag
    11701 cacgacaccg accaaaaacc gaccgtcctc atcggcaaag acacgcgcat ttccggctat
    11761 atgctggaag ccgctttggt ggccggtttt acggcggcgg gtgtgaatgt ggtacagacc
    11821 ggaccgctgc ccacgcccgg cgtggcttat ctgacccgcg cgttgcgcct gtccgccggc
    11881 gtgatgattt ccgcgtcgca caacgcctat tccgacaacg gcatcaaatt cttcgccgaa
    11941 ggcggcgtga agctttccga tgaaatcgag ttggaaatcg aagccaaaat cgacgaagaa
    12001 atgaaaaccc agccttctgc acgcctcggg cgcgcccgcc gcatcagcgg tgcggacgac
    12061 cgctatatcg aattttgcaa atccaccttt cccagccatt ccgaccttcg gggtttgaag
    12121 ttggttatcg ataccgccaa cggcgcgggg tacggtgtcg ctcccaaggt gtttcacgaa
    12181 ctgggcgcac aagtcgtcag catcggcgac gaacccaacg gctacaatat caatgaaaaa
    12241 tgcggtgcga cttataccaa gacactccag gccgccgttt tacagcatga agccaactac
    12301 ggcatcgcct tagacggcga cggcgaccgc ttgatgatgg tcgataaaaa cggtaaggtt
    12361 tacgacggcg acagcctgat ttacgtcatc gctaaagccc gcgcccgaga aggtatcaac
    12421 atcggcggcg tggtcggcac ggtcatgacc aatatggcga tggaaaacgc cctgaaagag
    12481 cagggcgtcg atttctgccg cgccaaagtt ggcgaccgct atgtgttgga acagttgaac
    12541 caacgcggct ggctcatcgg cggcgaagcc agcggccata ttttgtgcat ggacaaacac
    12601 aacaccggcg acggcattat ttccgcgctg caagttttgg cggcactgca aacgctgaac
    12661 caagacctcg ccaccgtttg cgccgattgg cagccgtatc cgcaaacgat gattaatgtc
    12721 cgtatcggca aagggcaaaa ctggcaggaa gcctcaaaag acgtgttggc ggaagtggaa
    12781 aaagaactcg aaggcaaagg gcgtgtcgtg ttgcgcgctt cgggaaccga acccgtcgtg
    12841 cgtgtgatgg tggaggcgcg gcaggcggat tgggcgcgcg acggtgcgga acgtattgct
    12901 tccgccatcg gcagccttta ggcaaaatca ggcaaaaccg tttcaacagc ggcggttttc
    12961 ctgtttaaat gccgtctgaa cgtccggcag agggcgcgaa tctgcccctt gccgctttca
    13021 gacggcataa tctttgatag aatgccgttt cgcgcagaaa atgtttcggc ttgttctgac
    13081 tttttatctc cgacaatgga atatccgcta tgtttgccct tttggaagcc ttttttgtcg
    13141 aatacggcta tgcggccgtg tttttcgttt tggtcatctg cggtttcggc gtgccgatcc
    13201 ccgaggattt gaccttggta acaggcggcg tgatttcggg tatgggttat accaatccgc
    13261 atattatgtt tgcagtcggt atgctcggcg tattggtcgg ggacggcatc atgttcgccg
    13321 ccggacgaat ttgggggcag aaaatcctca agttcaaacc gattgcgcgc atcatgacgc
    13381 cgaaacgtta cgcacaggtt caggaaaaat tcgacaaata cggcaactgg gttctgtttg
    13441 tcgcccgctt cctgccgggt ttgcggactg ccgttttcgt taccgccggc atcagccgca
    13501 aagtatcgta tctgcgcttt ctgattatgg acgggcttgc cgcgctgatt tccgtgcccg
    13561 tttggattta cttgggcgag tacggcgcgc acaacatcga ttggctgatg gcgaaaatgc
    13621 acagcctgca atccggcatc ttcatcgcat tgggcgtgct ggcggcggcg ctggcgtggt
    13681 tctggtggcg caaacgccga cattatcagc tttaccgcgc acaattgagc gaaaaacgcg
    13741 ccaaacgcaa ggcggaaaag gcagcgaaaa aagcggcaca gaagcagcag taaatcagat
    13801 tttcgaccgt ccggacgcat ttcgcgtttc aggcggtctt tgcattttca ggatgagcca
    13861 tgaaacagaa aatttttgtc ctttataccg gcggcaccat cggcatgacg caaagcagcg
    13921 aaggcctgcg ccccgatacc gcgctggtcg ggcaggcact cgcgccgttt tcaaacggca
    13981 tggatttcga ttggcacgtt tgtgggacgc tgattgattc ttccgccgtc caactgcaaa
    14041 actggtgcgc ttggctggac atcattgccg ccgcgctgcc gcagtacgac ggcgttttgg
    14101 tgctgcacgg cacggacacg ctcgcctata ccgccaatct gttcgccctc gcgctgcagg
    14161 gtttggacaa gccgatcgtc ctgaccggtt cccaatggcc gtacaacgcc gtgggcagcg
    14221 acgcgccgcg caatctggcg actgccgttg ccgcattccc actcggattg aagcagacgc
    14281 ttattgcctt tgacggcaaa ctttatcccg ccgtcggcag cagcaaagtc agcaccgaaa
    14341 ccgccgccgg tttcgacaat ccgcatttcg gtgtcatcgc cgaatgggat gaaactcaag
    14401 gctggtacaa tcttcgtatt ccgtcccaag atgcggcggc cgtttcagac ggcctcaaaa
    14461 tccgctatcc tgacccgcag gcaaaaatcg ccgtccgcac gcttatcccc ggctttgccg
    14521 tccaagaact tgccgacgga ctcggacagc ttcccgccca agcccttatc ctgcaaagct
    14581 acggacacgg caacacgccc gcagacgaag gtttcatccg cgccgtgcaa gactttacgc
    14641 agcaaggcaa actgctgctc aacatcagcc aagtccgaca aggcagaacc gctgccgttt
    14701 acgcgcaagg caacgcgttc cgcaactcag gcatcatcaa cggcggcaaa tgcaacctcg
    14761 aaaccgccac cgcgcttatg accctcgccg tatcgcaagg ctggggtaag gaagaggtgg
    14821 aaaaagagtt ggcaagactg aagttatagc ggattgaaat ggcaatgacg gggcgttgac
    14881 cgcgccttat gcgccgcccg tacactgcat cccttgccgc cctgccttat ttttatgtga
    14941 acctgccgca ttgcggaatc gaaatgaact tcaccgacac ccactgccac cttgccgatg
    15001 ccgccctgcg cgaaaacctg ccgcacatcc tgaccgcagc gcgggaggca ggggtagggc
    15061 ggtttatcgt tcccgcgact cggccgcagg attggcagga cgtggcggat ttggctcaaa
    15121 ggttgtctga aaatccgctt tggggcaata tccatatcgc gctcggcatc catccttggt
    15181 tttcagacga cgtttccgaa ccggatttcc agcttttgga acaaacattg aaagcgcatc
    15241 cgacagcatg ggtcggcgaa atcggcttgg atttttacga caaaacccaa acgccgccgc
    15301 agcgcgaacg gcaaatccaa gttttcgtcc gccagcttga aatcgcgcaa accctgcgcc
    15361 gccgcgtgat tatccataat ctgaaagcca ccgccgacat cgccgccgcc gtcaaacaga
    15421 caggctttgc ccaaggcggc atcgttcacg ccttctcagg cagcgcggaa gaagcgcgcg
    15481 tgttgacgaa actgggtttc aaaatcggca tcggttcgtt gttgctcaat ccgaacgcgc
    15541 gtaaagtgcg cgatacgctt aaagccttga acgacgggga tttcgtattg gaaaccgaca
    15601 gcccgtttat gctgaaaaaa gagattaata cgcctgccaa tattccgggt attgcaaaga
    15661 ttgctgcgga aatccgcgga acctgtgtgg aagagattgc caaggtaacg gagcgcaatg
    15721 ccgatgccct gttgggacgg taggttatcc atctgagatt atctttttga atgtccggaa
    15781 aacctattat aataattcag tgttgatgcc gtctgaaatt caggcggcgt ttgttatgga
    15841 agaattatga agccgtctat cttagaaaaa ctgcaacaac tcggcgaccg gttggaagaa
    15901 gttacccacc ttttagggca acccgaagcc acatccgata tggacaacta ccgcaagctc
    15961 acgcgcgaac acgctgaact gacccccgtc gtcgaagtat tccaaaacta tcaactggcg
    16021 caaagcgatt tggcggatgc cgaagaaatg ttgtccgacc ccgaaatgaa agactttgcc
    16081 gccgaagaaa tcgaagcggc gaaagccaaa atcggcgcac tcgataccga attgcaaaaa
    16141 ctgctgctgc ccaaagatgc cgacgacgac aaaaacatct ttatcgaagt acgcgccgga
    16201 acgggcggcg acgaagccgc gctgtttgct ggcgatttgc tgcgtatgta cagccgctac
    16261 gccgaacgca accgctggca ggttgaaatc gtgtccgcca acgaaagcga gttgggcggc
    16321 tataaagaag ttatcgcccg tattatcggc ttaggcgcgt acagccgttt gaaatttgaa
    16381 tcgggcggac accgcgtgca gcgcgtcccc gccaccgaaa gccaaggccg catccacacc
    16441 tccgcctgca ccgttgccgt catgcccgaa gcggacgaac tggaagacat cgagttgaac
    16501 cccgtcgacc ttcgcatcga caccttccgc gcatccggcg caggcggtca gcacatcaac
    16561 aaaaccgatt ccgccgtccg cattacccac ctgcccaccg gcatggtggt cgaatgccaa
    16621 gacggccgca gccaacacgc caacaaagcg caggcaatga aagttctcgc cgcccgcctg
    16681 aacgacgcgc aaaaacgcga agcccaagcc aaagaagccg ccgaacgcaa atccctcatc
    16741 ggcagcggcg accgcagcga acgcatccgc acctacaact atccccaagg cagggtaaca
    16801 gaccaccgca tcaacctcac cctgcacaag ctggattttg tgatggacgg cgatttggca
    16861 gaaatcaccg atgccctgat tgccgaacat caggcggagc ttttggcggc aatgggcgat
    16921 tgagttttgt gttttgaaat ggaaatgccg tgcatgcaat caattttaat ccaccatatt
    16981 ctactgattt gtttgaattc agtgtattat gccgtttctc aaccatagac gacaactgga
    17041 catattgatg aagattgcga tttacggtac gaaaagctat gaccgcgaac attttacccg
    17101 cgccaaccgg catttcggct tcgagctgga gttttttgat tttatgctgg atgcgaaaac
    17161 ggcgaaaatg gcggaaggcg cggaagcggt ttgtattttt gtaaacgacg acggcagccg
    17221 gcccgtgttg gaaaaattgg cgcaaattgg cgtgaaaact gtggcgttgc gttgtgccgg
    17281 cttcaataat gtggatttaa aggcggctga agagttgggc ttgaaagtcg tgcgcgtgcc
    17341 tgcctattcg cccgaatcgg ttgcggaaca tacggtcggt ctgatgctga ctttgaaccg
    17401 ccgtatccac aaagcctatc agcgtacccg cgatgcgaat ttttcgctgg aaggtctgac
    17461 cggtttcaat atgtacggca aaacggcggg cgttatcggc acggggaaaa tcggtattgc
    17521 aaccatgcgg attttaaagg gtttcggcat gaacctgctg gctcacgatc cgttttgcaa
    17581 ccccgaagcg gaaaaaatcg gcggcaggta tgtggatttg gacgagctgt atgcccagtc
    17641 ggacatcatc acgctgcatt gccccgccac gccggaaaac cactatatgc tgaacgaagc
    17701 ggcgttcgac aaaatgaaag acggcgtgat gattatcaac accagccggg gcgggctgat
    17761 tgacagtgcc gccgcgattg aggcgttgaa acgccggaaa atcggcgcat tgggcatgga
    17821 tgtgtacgag aacgagcgcg agctgttttt tgaagacaaa tccaacgatg tgattaccga
    17881 cgacgtgttc cgccggttgt cgtcctgcca taacgtgctg tttaccggtc atcaggcgtt
    17941 tttgacggaa gaggcgttgg gtaatatttc ggaagttacg ctgtccaata tccgcgaggt
    18001 cggacagatc ggcgattgcg gcaatgcggt tcgtgccgac ggctgacgtg ttttaaaagt
    18061 ttaaaggaaa tgctgtctga accaggtttc agacggcatt tgacgttcag gcagcttgca
    18121 aacttatttc acttccaact tggcaacgcc gcccatatac ggttgcagtg cggcagggat
    18181 gttgatgctg ccgtcggcgt tttgatggtt ttccaatacg gcgaccagcg ttctgccgac
    18241 agccaagccg gagccgttca aagtatgtac caagcggttt ttgccgtttt cgtctttgaa
    18301 acgcgccttc atgcggcggg cttggaaatc ttcgcagttg gagcagcttg agatttcgcg
    18361 gtaggtattt tgcgccggca cccaaacttc caaatcatac gttttggttg cgccgaagcc
    18421 catgtcgccg gtacacaggg taatcacgcg gtagggcagt tccaaagcct tcaggatgtt
    18481 ttcggcatgg ccgaccattt cttccagcgt ttcgtatgat ttttcgggat gaacgatttg
    18541 aaccatttcc actttgtcga actggtgctg gcgaatcaga ccgcgcgtgt ctttgccgta
    18601 cgaacccgcc tcgctgcgga aacagggcga atgcgcggtc agcttcagcg gcagttgttc
    18661 ggacgggata atgctgccgg caacggtatt ggtcagggta acttcagctg tcggaatcag
    18721 atattgcgtg gttttgctct cgtcgccgcc acgggtaacg tggaacaaat cttctgcaaa
    18781 cttcggcagc tgacccgtgc cttgcaaggt ggtgtcgtcc acgatatagg gtgtgtaatg
    18841 ctcggtgtag ccgtgtttca gcgtgtgcgt atcgagcatg aattgcgcca gcgcacggtg
    18901 caggcgggcg atttgtccgc gcatcacggt aaatcgtgcg ccggaaagtt tcgcgccacc
    18961 ttcgaaatcc aaacccaaag gttcgcccaa atcgacatgg tctttgattt caaagtcaaa
    19021 ttcgcgcggg gtgccgactt tgcggacttc gacgttttcg gtttcgtctt taccggcagg
    19081 tacgctttcg tgcggcaggt taggtatgct caacaaccat gcgtccaatt ctttttgaac
    19141 ggcatccaaa tcggcggcag cctgttccaa atcggttttg atttgggcga cttgatccat
    19201 cgccgcctgc gcttcttcgt gtttgccctg acctttcagt gcgccgattt gtttggaaat
    19261 gctgttgcgc gaggcttgta gttcttcagt tttcacctga acggacttgc gtcgttcttc
    19321 cagtgcgtca aaacgtgcgg tatcaaagtc ataaccgcgc cgtgcaagcc gttcggcaac
    19381 ggcggcggtg ttgctgcgga gcaattggat atctaacatg gtctgattcc cgaattaatt
    19441 tgaaacacat tattgtaaac caaatttaag atattttccc gaatccgtcc gtgtttcgac
    19501 atgcttgaac cataccgtct gatttgtcaa aaccgttcga tttgtgggaa aatcccaaga
    19561 ttgaatttaa cggagggcga caccgtgttg gacagagaag gctatcgccc caatgtcggt
    19621 atcatcttaa ccaacaaccg cgacgaagtc ttttggggta agcgcgtgcg cgaacattct
    19681 tggcagtttc cgcaaggcgg catcaagccg ggcgaaagcc ccgaaaccgc catgtaccgc
    19741 gagttgtacg aagaagtcgg gcttttgccg caacacgtca aaattatcgg ccgcacgcgc
    19801 gactggctgc gttatgacgt gccgaacaac tgggtacgcc gcgaatggcg cggatcctat
    19861 cgcgggcaga agcagatttg gtatctcctg cgcctgaccg gccgagattg cgatgtcaac
    19921 ctgcgcgcca cccgccaccc cgaatttgac ggctggcgtt ggcatcaata ttgggcgccc
    19981 gttgacgaag tgattgattt caaacgcgac gtttatttgg gggcgttgaa agaactctct
    20041 tcccgcttcc tgcgcggtat ggaaagttat gaagactttg ccgcccgcca accttccggc
    20101 aaccggtaaa acaacggaac gcaacgcttt caggccgtct gaaagcgttg tttttcttac
    20161 tttcagatta ttcctatggc taaaaacaac caatacagcg aatccagcat caccgtcctc
    20221 aaaggtttgg aaccggtcaa agaacgtccc ggtatgtaca cccgcaccga cagcccgacc
    20281 catatctgtc aggaagtgat tgataacgcg gcggacgagg cgttgggcgg tttcgctacg
    20341 gcaatcgacg tgcaaattca tgaagacggt tcgctttccg tacgcgacaa cggccgcggt
    20401 attcccgtcg gtctgcaccc tgaagaaggc gtacccgtag tcgaactcgt gttcacccgt
    20461 ctgcacgcag gcggcaagtt caacaaaaaa gacggcggca gcgcgtatgc cttttcaggc
    20521 ggcctgcacg gcgtgggcgt atccgtgacc aacgcccttt ccacccgcct tgaggtaacg
    20581 gtcaaacgcg aaggcaaaat ccaccgtatc gtgtttgccg gcggcgacgt ggtcgaaccg
    20641 ttggcacaag tgggcaaatg cgccgtcaaa gacagcggca ccgaagtgcg cgtgtggccg
    20701 gacggaaaat attttgaaag cccgaattac agcattcccg aactcgaacg cctgctgcgt
    20761 gccaaagccg tgctgctgcc gggtgtgcgc gtttccctga cccgtccggt caaaggcgaa
    20821 gacgaagcgc acacccaaac ctggcattac cccgacggcc tgaaaagcta tctgaccgac
    20881 ctgattgccg acgcgcagga agccgtaccg ctgttctctt gcgaaaacta catttcagac
    20941 gaacacaacg gcgatttcag catcggcgaa ggcgccgcct ttgccctgac ttggctggaa
    21001 gaaggctcgt gtgccaacga aagctatgtc aacctcatcc ccaccccgct gggcggcacg
    21061 cacgaagcgg gcttgaaaca agccgtgttc aacgccgtca gcaacttcat caacctgcac
    21121 aacctcttac cgcgcggcgt gaaagtgcaa agcgacgacg tgttcggcaa aactgccttt
    21181 gtcctctctg cccgtgtcct cgacccgcag ttccaaggtc agaccaaaga caaactgacc
    21241 aaccgcgacg cgctgaaact cgttgctacc gtatcgggcg accctttgga actgtggctg
    21301 aaccaaaacg tggacttcgg caaaaaaatc gccgaactcg ccatccgtca ggcacaggcg
    21361 cggatgcgtt cggttaaaaa gattgaaaag aaaaaaggca gcggcgtcgc cgtcctgccc
    21421 ggtaagctga ccgactgcga aagcgaagac atccgcgaaa acgaactctt cctcgtcgaa
    21481 ggcgattccg ccggcggctc agccaaactc gcccgcgaca aagccaccca agccatcctg
    21541 cccctgcgcg gcaaagtgct caacagcttt gaagtccacc ccgaccaact cttcggcaac
    21601 gccgaaatcc acgacatttc cgtcgccatc ggcgtcgatc cgcacggtat taacgaccat
    21661 cccgatttaa gcggcctgcg ctacggcaaa atcgccatcc tgtccgatgc cgacgtggac
    21721 ggctcgcata ttcaagtttt gctgctgacc ttattctacc gccacttccc gaaactggtt
    21781 gccgacggac acatctacgt cgcccagccg ccgctgttcc gcgtcgatgt caacgcacaa
    21841 ggcaaaagca aacctgcccg caaattctac gccctcgacc aaaacgaact cgacagcatt
    21901 ttggagcggc tgcaaaaaga aggcgtcaaa gaaaccgcct attccatcag ccgtttcaag
    21961 ggcttgggcg aaatgaaccc cgaccagctc aaagacacca ccatgcaccc tgacacccgc
    22021 cgcctgttgc aggtacaaat cccagaaggt gcagatgacg agacgcgcga catcttcgtc
    22081 aaactgatgg gcaaaggcga agccgccgcc cgccgcgctt ggatggaacg cgaaggcgat
    22141 acggcggaat tggatatttg aaccgtgatt gccgcatacg aaaaaatgcc gtctgaaacc
    22201 aaatcggttt tcagacggca tttcgtttgg ggatttattc tgctgcggaa gatccggctg
    22261 cttcggcggc agcttgggcg gactgctgtt gcaaagcctg ctgcacgaaa ggatggtttt
    22321 gcgcgatcgc ctgttcttcg ggggtaactt cgcctttgaa acggttgttc aaatcgaaac
    22381 gtttgccgcc gcgcgccaag gctttcagat aacgcggacg gcggcagtgg ttggcgagga
    22441 cgcgtgcaat cagtgcggaa tcgtattgcg gcaaagcggc aatcaaatcc tgatcaatgc
    22501 cgagcgccaa cggtttgaag cgtttgaata catcgtattt gccgtagatg tggtcggcga
    22561 tcatttcggt ctgtttcttt ttgctcatag tttggacggc ggatttcagt gccgcgccca
    22621 aagcggtttc ttgtgtcatt tcggttgtat tcctctaaac aaacccgtgc gtcaaagcgg
    22681 cacggcaatg ctcggtattc tattataaag tctgtgtttt ggctaaattt ttatttgttt
    22741 gaaagggtaa tgtcgggcgt attaacctga acatccgcat tttgcgcgcg atggcgcagg
    22801 gcgtggtcga ttaaaaccaa tgccagcata gcttctgcaa tcggcgcggc gcgcaagccg
    22861 acgcaggggt cgtgcctgcc gtgcgtggcg agttcgatgg ggttgccgtt gatgtcgata
    22921 ctgcggcgcg gggtggcgat ggagctggtg ggtttgatgg cgatattgac gtggatgtct
    22981 tgtccggtgc tgatgccgcc gaggatgccg cctgagtggt tggacaggaa gccttgcggg
    23041 gtcagttcgt cgccgtgttc gctgccgcgt tggacaacgc tgccaaaacc tgcgccgatt
    23101 tccacgcctt tgacggcgtt gatgcccatc atcgcgtagg cgatttcggc atcgaggcgg
    23161 tcaaaaacag gttcgcccaa gccgacaggg acgttggcgg cttcgatatg cagcttcgcg
    23221 ccgacggaat ccaaggattt gcgcacgctg tccatatagt tttccagctc ggcaatttgg
    23281 ctatggttgg cggcaaaaaa aggattttgg gaaatgtgtt cgcagccttc aaaccggatt
    23341 tctttttcgc cgacttgggt cacgtaggcg gtgatttccg tgccgaattt ttctttcaac
    23401 cattttttgg caacggctcc ggcagcaacg cgggcggcgg tttcgcgggc ggaactcctg
    23461 ccgccgcccc ggtagtcgcg cgtgccgtat ttgtgccaat aggtatagtc ggcgtggccg
    23521 gggcggaagc tggtggcgat gttgccatag tctttgctgc gctggtcggt attgcggatt
    23581 aagagggcga tgggtgtgcc ggtggttttg ccttcgaata cgccggagag gatttcgact
    23641 tggtcggctt cgcggcgttg ggtaacgtgg cggctggtgc cgggtttgcg ccggtcgagg
    23701 tcaaattgga tatccgcttc gcttaattcc aagccgggcg ggcagccgtc gatgatgcag
    23761 cccaaacctg cgccgtggct ttcgccgaac gtggtcacgg tgaagagttg tccgaaagtg
    23821 ttgcctgcca tattttcctt ctgtcggcgg tatgttggag acggcggatt ttagcataaa
    23881 agttggagga aaacgggtta tatgccggta aaggggttgc gtgttttgca gtgaatcggc
    23941 ttataatccg gtctgatttt tcaggatagc gatatgagcg actacacgca gcagcttcaa
    24001 gataaaaaag accaccttaa aacccttttt gcaggtttgg atgttcctga gtgggaagtg
    24061 tatgaatctc cggacaaaca ttaccgtatg cgtgccgagt tccgtatttg gcacgaaggc
    24121 ggtgaaatgt tttacgccat gtttgaaaaa gggcagaagg ctggcggggc aagcctgatc
    24181 cgttgcgacc gcttcgatgc tgcttcagag gcagtcaatt gcctgatgcc tgaattgatt
    24241 gccgttgccg cccaatctgc cgaactgaga aaccgttggt atgccgtcga atttctgtcc
    24301 acgctcagcg gggaaatgct ggttaccatg atttaccaca aaaaactcgg cgacgcatgg
    24361 caacaggcgg cgcaagcgtt acagcaacag ttggatattt ccgttattgg gcggagcagg
    24421 ggacagaaaa tagtcttaaa acaggactat gtaacggaaa ctttgaaggt cggcaaccgg
    24481 gatttccgtt atcggcaaat tgaaggcagt tttacccaac cgaatgccgc cgtgtgtcag
    24541 aaaatgcttg aatgggcctg cggtgcagca gaaggattgg atggggattt gctcgaactg
    24601 tattgcggaa acggcaactt tacgcttcct ttatctgaaa agtttgaacg tgttttggca
    24661 accgaaatct ccaaaacctc cgtcagcgcg gcgcaatgga atatcgaagc caaccgcatc
    24721 ggcaacatta aaatcgcccg tctgtctgct gaagaattta ccgaagccta taccagaaaa
    24781 cgtgagttta aacgccttaa ggatggcggt attgctttga cggattacgc attttccact
    24841 attttcgtcg atccgccgcg tgccggcatc gatgagcaaa ctttgaagct ggtgtcgcag
    24901 tttgacaaca tcatctacat ttcctgcaat cccgaaacgc tgcgtgctaa tttggacacc
    24961 ttggtggaaa cccatgcggt cgaacgtgcc gccctgttcg accaatttcc gtttacgccg
    25021 catattgaaa gcagcgtact gttgaaaaag aaaatacttt gaaaaatcaa gaggtaagaa
    25081 ctatgtaccg acacatcgaa tactatcccg gcgatccgat tttgagtttg gtcgaaacct
    25141 tcaaaaacga cccgcgccct gaaaaagtca atttgagcat aggcatttat ttcgacgacg
    25201 aaggcaaaat gcccgtgttg gaatccgtga gccgagccga aaccgcccgc gccgccgcgc
    25261 ctgcgccgtc gccctacctg ccgatggaag gcttggacac ttaccgcagc gcggtgcagc
    25321 atttattgtt cggcaaagac aaccctgcgc tcgcgcaagg acgcatcgct accgtgcaaa
    25381 ccttgggcgg ctcgggcgcg ctcaaagtcg gagcagattt cctgcaccgc tggtttcctg
    25441 aagcgcgcgc ctacgtcagc gacccgactt gggacaacca tcgcggcatt tttgaaggtg
    25501 caggtttcga ggttggcact tacccatatt acgaccctgc cactgtcggc gtgaaattcg
    25561 acgaaatgac cgcgtttttc aacaccctgc ccgaaaacag cgtcctgatc ctccatccct
    25621 gctgccacaa cccgaccggc gtggatatgt cggaacaaca atgggacgaa gtgttgcaca
    25681 tcatcaaaac gcgcaaactg attccgttta tggacattgc ctaccaagga ttcggcggcg
    25741 atttggacag cgatgcctac gccgtccgca aagcggtgga aatggaattg ccgctgttcg
    25801 tcagcaattc cttctcgaaa aacctgtcgc tctacggcga gcgcgtcggc ggcctgagcg
    25861 tggtttgccc gaataaggaa gaagcggaat tggtattcgg acagctcaaa ttcactgtcc
    25921 gccgtatcta ctccagcccg cccgcgcacg gcgcgtatat cgccgccgac gtgatgaaca
    25981 gccccgaact ttacgccttg tggcaaaacg aggtttatat gatgcgcgac cgcatccgtg
    26041 cgatgcggca gaaactttat gatgtcttaa ctgcgcaaat ccccgatcgc gatttcgctt
    26101 atttcatcaa acagcgcggc atgttcggct acacaggatt gagcgtggaa caagtccgca
    26161 ggctgcgcga cgaatttgcc gtttacctgc tggattccgg caggatgtgc gtcgccggac
    26221 tgaatacgtc gaataccgac tatgttgccc gcgcatttgc ggaagtcttg aaataagagt
    26281 ttgaagtaag tcaaaagacc gtctgaaaaa tatttatctt tcagacggtc tctttataat
    26341 tggcgcaccc aacagggatc gaacctgtga cctccagctt cggaaactga cactcttcca
    26401 actgagctat gggtgcgtaa aacgtaaggt taacgtaaat tctgcaaatt ggcaaaggtt
    26461 atcttgcgcc ggcaggcggc gtatggcggc ataaggagag ttttcttgag gataaaccat
    26521 tattttcaaa ggattgtttg ttttatacag ataccgttgg caaatttttt catattttca
    26581 atgatagcga ttggaaagac cctgtgaatt cagtataatc cagcaaaata ttgttaactg
    26641 cgtttaacac accaaactat aatttacagc acaacctaac ctgacggcga ggcctaccaa
    26701 atgaaacaac tccgcgacaa caaagcccaa ggctctgcac tgtttaccct tgtgagcggt
    26761 atcgttattg ttattgcagt cctttatttc ctgattaagc tggcgggcag cggctcgttc
    26821 ggcgatgtcg atgccactac ggaagcagca acgcagaccc gtatccagcc tgtcggacaa
    26881 ttgacgatgg gcgacggcat ccccgtcggc gaacgccaag gcgaacagat tttcggcaaa
    26941 atctgtatcc aatgccacgc ggcggacagc aatgtgccga acgctccgaa actggaacac
    27001 aacggcgatt gggcaccgcg tatcgcgcaa ggcttcgata ccttgttcca acacgcgctg
    27061 aacggcttta acgccatgcc tgcaaaaggc ggtgcggcag acctgaccga tcaggaactt
    27121 aaacgggcga ttacttacat ggcgaacaaa agcggcggtt ctttcccgaa tcctgatgag
    27181 gctgcgcctg ccgacaatgc cgcttcagga acagcttctg ctcctgccga tagtgcagct
    27241 ccggcagaag cgaaggcaga agacaagggt gcggcagccc ctgcggtcgg cgttgacggt
    27301 aaaaaagtct tcgaagcaac ctgtcaggtg tgccacggcg gttcgattcc cggtattccc
    27361 ggcataggca aaaaagacga ttgggcaccg cgtatcaaaa aaggcaaaga aaccttgcac
    27421 aaacacgccc ttgaaggctt taacgcgatg cctgccaaag gcggcaatgc aggtttgagc
    27481 gatgacgaag tcaaagcggc tgttgactat atggcaaacc aatccggtgc aaaattctaa
    27541 atttagatta aaatttcgga ttaaataaaa acggggcagg tatctgctcc gtttttttat
    27601 gggaatttat agtgaattaa caaaaatcag gacaaggcga cgaagccgta gacagtacaa
    27661 atagtacgga accgattcac ttggtgcttc agcaccttag agaatcgttc tctttgagct
    27721 aaggcgaggc aacgctgtac tggtttttgt taatccacta tatttgtttg tccgtgtgga
    27781 aatgacatca aagggtgtga ataggctttt catctttgaa atctgtctgc ccgatcggat
    27841 gaataaaaag taggatgata aaaaaaactg atgtatggat actggtttaa cccatttgtt
    27901 ttaaagttat agtcgagata cgtgtatcgg tgcaacgagt ctgccgtcga cgaaaatgcc
    27961 gtctgaaagt gtttcagacg gcatttgtct ttggggtttc aacggtcagt cttcataatt
    28021 ttccatcggt gggcagctgc acacgagatt gcggtcgccg tacacgtcgt ccacgcggtt
    28081 gacgaagggc cagaatttgt gttcgcgcac gaagggcagc gggaagacgg cttcttcgcg
    28141 agagtacgga tgcgcccatt cgccggttac gtcggaggcg gtatgcggag cattcaccag
    28201 tgggttgtcc tctttcggcc attcgccgtc gatgactttc tgcacttcgc ggcgaatgga
    28261 tttcagggcg gcgatgaagc ggtcgagttc ggctttgctt tcgctctcgg tcggctcgat
    28321 catcagcgta ccggcaacag ggaaggaaac cgtcggcgcg tggaagccgt agtccataag
    28381 gcgtttggcg atgtcggttt cggtgatgcc gctttcggct ttgagcggac gcaaatcgac
    28441 gatgcattcg tgcgcgacgc ggccgttttt gccggtgtag agaatcggat agtcttcgcc
    28501 tagacgtttg gcgacgtagt tggcgttgag caatgcccaa cgtgtcgcct gctccatacc
    28561 ttgtttgccc atcatggtca ggtacatcca agtaatcggc aggatggatg cagaaccata
    28621 tgctgcggca gccacggcag tttgatcggc acttgcgctg tgggtgtcgg tcaaggtatg
    28681 acccggggca aacggggcga ggtgggcttt cagaccgatg ggacccatgc ccggaccgcc
    28741 gccgccgtgg gggatgcaga aggttttgtg caggttcatg tgcaacacgt ctgcgccgac
    28801 tttggcaggc tgcatgatgc cgatttgggc gttgaggttg gcgccgtcca tgtaaacctg
    28861 tccgccgttt tcgtggacga tgcggcagat gtcgcggatg ccttcttcgt acacgccgtg
    28921 ggtggacgga taggtaatca tgatggcgga caaagcgtcg cggtgttgct cggctttggc
    28981 tttcaaatcg tcgatattga cgttgccgtg ttcgtcggta tcgacaacga cgactttcaa
    29041 gcccagcatg gccgcagtcg cagggttggt accgtgggcg gatttgggaa tcagacagat
    29101 gttgcggtgt ccctcgccgt tggcttcctg atagcggcgg atggagagca taccgctgta
    29161 ttcgccctgc gcgccggagt tgggctggaa ggaaatcgcg tcaaagccgg tgatggcttt
    29221 caggctgttt tccatgtcgg caagcaattc gcggtagccg gcggtttgcg cttcgggagc
    29281 gtaagggtgg atgtcggaga actccgccca agtaatcggc aacatttccg cagtggcatt
    29341 gagtttcatg gtgcaactgc ccagcgaaat catactgcgg ttcatcgcca aatcgcggtc
    29401 ttcgagtttt ttcaggtagc gcaacatttc gtgttcggtg tggtaactgt tgaacacagg
    29461 atgttgcaga atgtcgtttt gacgcagtaa ttcggcgttc agacggcctt tgacatcatc
    29521 ggcaaatgcg aacgtatcct tgccggtaaa cgcgcggtac aaatcaacca aatcttcgcg
    29581 tgtcgaagtt tcatggaagg ctgctgcgac ttgagtatcg ttgacgcggc gcaggttgta
    29641 acccgattcc aaagcagcgg caaacacttg gtctgttttc tctttactgc cgaaatcgac
    29701 ggtaacggta tcgaagaaga ctttgtgaac cactttaatg ccgtctgaaa ccagcgcgtc
    29761 ggcaaaggca gaagccagcg cgtgaatgcg cttggcaata cgtttcacac cttcggggcc
    29821 gtggtaaacg gcatacatac ccgccaagtt cgccagcaat gcctgtgccg tacaaatatt
    29881 ggatgtcgct ttttcgcggc ggatgtgttg ctcgcgggtg gacaacgcca tgcgcaaggc
    29941 aggtttgccc gatgcgtctt tggatacgcc gatgatgcgg cccggggcgg aacgtttgaa
    30001 cgcgtcttta aacgcgaaat aagcagcgtg cggaccaccg aagcccatcg gtacgccgaa
    30061 gcgttgcgtg ttgcccaaag caatatccgc gcccaattcg gcaggcggtt tcagcaaaac
    30121 caagctcata atgtcggcgg aaacggcaac gattgtgcct tttgctttca gacggccgat
    30181 aacgtcctgc aagtcttgca catcgccgtc tttgccgacg tattggaaca gcgcgccgaa
    30241 gtattcgccc tcgtcggctt gagcaaaatc gccgaccacc agctcgaagc cgaaatactt
    30301 ggcacgggtt ttcatcacgt ccaaagtttg cggatacacg cgctcgtcca caaagaaacg
    30361 ctcggatttt accttgccca cgcggtgcgc catcgccatc gcttcggcgg cggcggtcgc
    30421 ttcgtccagc aaagacgcgc ccgccacagg gaaaccggtc aaatcgatac acacttgttg
    30481 gaagttcaac aaagcttcca aacgaccctg cgcgatttcc gcctgatacg gcgtgtaggc
    30541 ggtgtaccaa cccggatttt ccaatacgtt acgcaaaatc acgttcggca cgcgggtcgg
    30601 gtaatagcct aaaccgatat aggatttgtt gatcatgttt ttcgacgcaa tgcctttcaa
    30661 ttttgccaac gcgtccgctt cggtcagggc atcgggcaaa tcgagttcag acggcatacg
    30721 gatgctttgc ggcacggtgt tgccgacaaa atcgtccata cttttctcgc cgacagcggc
    30781 aagcaacgcc gcttcgtcgc caaaactcaa atgccgcgcg gcaaattcgt cggggttgaa
    30841 cagttcggac agtttcattt ctactccttc gggtttgtag ggctgccatc aggcagaatt
    30901 tttagacatc ggatgattcg ggcaagggta gcacaaaaga cgggataatg gcggacaatg
    30961 cgccagaatg cagcaggtca ggacaagcag caccgcaagc ggcagcgata agggaaagcc
    31021 gccgaccaaa accatgaaac ctgcaggcac cagccaagct aagggatgcg ccggaagcgg
    31081 aaaaacaata ttgagcagaa ccaaaatcac gacaaacagc ggcagcaccg ccatcaggtt
    31141 ggcacacctg tatgttgcgt acgggtcgga cgcttcttca ggttcgcaat attccatgat
    31201 ttcagcctgt ccgggcttta tccacagcag gctcggacgg tcggtcatgc cgtctgaacc
    31261 ggcaggccgt ctttttcaaa aaatgccata ccgctgcaac ttcatgcggc tgtatggcgt
    31321 aggttttgca cttcagacgg catatgcgtc ccgaagcagt ttggtgtccc agtcggttca
    31381 tgattatagt ggattaaatt taaaccagta cggcgttgcc tcgccttgcc gtactatttg
    31441 tactgtttgc ggcttcgtcg ccttgtcctg atttttgtta atccactata tataaacaac
    31501 ttgggtgcgg ataaaccttt gtttatctaa acccctgttt tctcaaaaat tgattcaaat
    31561 cttcggcaaa tttccgatag cctttgccgt tggcgtggat ttggtcggat ttcagattat
    31621 tatcgcccaa aatttccgcc cacgcgccgc cgaacagcgg aatgccgtat tcctcggaca
    31681 aatcctcata cagcggatga tcgctcaaat gcccgaacaa cgcgcccaag gtaatgtgcg
    31741 gcacgccgac gaggacggcg gggatgtttt ccttctgcac ggtttcgatg attttcgcga
    31801 tattggcgcg ggtctgctcc ttgggaactt tgcgcagaaa gtcgttgccg cctatgccga
    31861 caatcacaag cttgggtttg cgtgccaaca gcgcgggcag gcgcgacagg gcttgggcgg
    31921 atgtatcgcc cgatacgccg ccgttgacaa tattccaacc cgtcagtttt tgcagttgcg
    31981 cggggtagga ttcgccgggg tttgcgccgt agccgaaggt aagcgaatcg cccaaggcaa
    32041 gtacggtgct tccttcggga attttggcgt gggttcgggc ggattttctg ccgcaggcgg
    32101 taaggagcaa cgcgcctgcg ccgaggagga aggttcttct gttcattggt ttttcagatg
    32161 gcatcgagcc atttcgggtg gtatttcagg gtttcacggt aaaccggaca gctttcggcg
    32221 tgcgcgcctt tgaggtagcc ggtactcatc agaaattcgc cgacgatttc gccgccgacg
    32281 aatttgaaat gttttttaaa gagtttaacc cattcgtctt tgcttcgcgg atggtgcgcg
    32341 tcgagccagt tcttgaacga gccgtattct tgttgcaacg cttggatttg ccgtgcattg
    32401 aaaatggcgg catcgatttt caggcggttg cggacaatac ccgcatcggc aagcagccgc
    32461 tcaatatcgg cttcgccaaa tgcggcaaca gtatcgatgt cgaacccttc aaatgccgtc
    32521 tgaaacgcct gccgcttctt cagcatcagc gtccagctca atcctgcctg attgatttcc
    32581 aacaccagcc gctcaaacaa ttcattgtcg tcctcaatcg gaaaaccgta ttgggtgtcg
    32641 tggtaatgtt tgttcgggtt gtcggtgttt tcgggaagtg aggcggcaaa ttcgcaatag
    32701 ttcacggttt actcgaccat ctgttgcgcc gcctgtttca gtccctgttc gagtgcggcg
    32761 gtcatggcgg cgtagccgtc accctgctgt tcggtttcga tatggaaggg tctgttcgta
    32821 ccgtcgggta ggacggcgta gccgctgatg agggttttgc ccgtgtagct gccttggaat
    32881 gcgtcgatat agaccgtcca tttttcggta ctgccgctgc gtgaggcagg aacaaagatg
    32941 cgtgtgctgt ccaaacggtt gaatgcattg ctcaacgccg cttcgagcat atcgtccaag
    33001 gtgtctgccc agacgtggtt ttgtgcggtg ttgaggcggt aggggtcggt ttgatagacc
    33061 agtccgccgc gtttgagcgg ttcggcaaga cggacttcga cggcagtttc gccgccttgc
    33121 gttgcaggac ggatgtagcg gctgtcgggc aacacgaaat attgtgtgct ttgcacagta
    33181 ccgcaggcgg caagcgtcag ggcggcggca atcgggaaga ggcgcattat cggcttcctt
    33241 tcgggatagg gtctttgctg ctgctgttga aaatcagcgc gttgggtttt tctttcaaag
    33301 tgttaatgac gggttgaacg tcttttaagg ttttgtccaa actttgcagc gtattttgta
    33361 cgtcgccgta gataggcgat tgaggcgata cgccttgcag ggttgtgcgc aactctttca
    33421 gggtttggtt cagttcgttc ggaatgtttt gtgtctgcgg tttgccgacc agtttgtcga
    33481 tggagcttag ggcggcattg gcagatttga gtgtggattt gagctcggca agcgaaccgt
    33541 tcaattcggc aaccgtctta tctaaaggca gtttgtcgaa cttgtccagc aaatccgcca
    33601 atttgacctg caaatcgtcc aaaccgccgc cctgggtcgc gataacggta tcgcctgcat
    33661 aaacggtatg cggtcgcagc ttaggtgatg cggaaggctg atcgttcaac tcaatcattt
    33721 tgcttccggt cagcaggttg ttgctggaga tggtggcggt caggcctttg tttaaggccg
    33781 tctgaaattg ttgtttccaa tgttctttgc tttgttcgtc ggcattgatt tccaaacggg
    33841 aaggttcaat gcggatgcgt acgggtatcc agccgttttc aaacaggtgc aggctgtcgt
    33901 tgcggtcgaa ataaggaacg tcggaaacca cgccgacatt cagccctttg tactcgacgg
    33961 gcgaaccgac ggtcaggccg cgcacggatt gtttgaaaaa cgcggtgtag tacagcgagc
    34021 ggtcgtcagg caggttggcg acttcgctgc ggctgtcgta aagcgtgaag ctgtcttcgc
    34081 ttttgacgtt tttactgttt ttggttttcg gcgaatcaaa tgaaatcgcg cccgacagca
    34141 gggcaggcag aggggcggaa ttgagtttga tgccgctgcc tgtggtttcg atattgatgc
    34201 cgctttccag ccaaaaacgg ctggcggaat gaatcagttt gtcgttgggg ctttggatga
    34261 agatggtgta atgcacgctt tggtcggacg ggtcgaaatg cgcgctttcg acttgcccga
    34321 ccataaagtt ttcatacaaa acagggctgt tgacgttgag gatgcggtcg tttttaccaa
    34381 tcaaattcaa gcgcagcccg ctttgcccga tggcggtaac gggcggaatg tcctgcacct
    34441 ggaacacgtc ttttgcctcg tcgcttttgc cgggtgtaaa ggcgatgtac gaacccgaaa
    34501 gcagcgtacc caaaccggtt acgccgcttt ggtcgatacg cggcttgacc acccaaaact
    34561 gggtatcgct gcggatgagg tcggatacgt ccgcattgag ttgggcggtt acttccacgc
    34621 ctttttggtc gtcgcgcagt ttgattcggg taacgcgtcc gacatcgatg ctcaatactt
    34681 tgatgaccgt attgttgacc tcaatgcctt ccgcgctgtc catcaagagc gtaaccacag
    34741 gccccctgtt gcggatttcc ttaacccaaa gccagccgcc ggcaatcagc gcgatcagcg
    34801 gaaccagcca gacggcggag agcaaggtgt tgtttttgcg gacgcgtgct tgggcgtgtc
    34861 cgtttggagg agggctgttg tcagtcatgt ttttccgttt cgttaaaagc catgccgtct
    34921 gaagcgcgtt tgtcccaaag caggcgcggg tcgaaataat aggcggacag catcgtcaga
    34981 atcacgacca ggcagaaata gactgccgca ctgcccggaa tgacgcgcgc ggcataagtg
    35041 tggaacgaac acatcaaaat aataatcaca aaaatatcaa tcatcgacca gcgaccgact
    35101 gcttcggtga tgcggtagag gtgcgacaat ttctttgcgc ccgccggcaa agcgaagcgg
    35161 gcggacgcaa tcaaaaccga cattgccgca atcttcagca ccggcaccaa aatactcgcg
    35221 ctgaaaataa ccgccgcaat cagcctgtcg ccctcgtccc acatataagc gatgccgtta
    35281 aggatggtat tgacctccgt ggcggcagga ttggatgaaa tcataatcgg caggatattg
    35341 gcagggaaat acaaaataac cgccgccgtc agaaacgccg acgaaatact cagacttttc
    35401 ggccgtcggc ggtacagttc cgcaccgcac acgccgcagg gggattcggc accgtctcgg
    35461 aaatacaggc agcggctgca acaggttttg ccttctgatg ccgtctgaac cgcattatcc
    35521 cccgtcagcc gcccgatttg aaaatacacc caatgctggg gaaccgatac cgaagtccga
    35581 atcagcataa ccgacagcgc gaacatcaga taaaacgccg acccgaagcg aacctctgcc
    35641 acagacgaga gcttgatata cgccaccagc gtggaaacaa aaaacacatc caccatcatc
    35701 gcctgcctca agcgcaccat cacacgcgtt gccaaacgca gcgcaggata cacccgtttc
    35761 cgtatcagcg cggcatagac atacaggcac agcagcagaa acagaaccgg cgcgccgaag
    35821 gtcagcacaa acatcacttc ggccaaaaaa ccataatcct gaaacaccat caggcgcatc
    35881 atctcgggca gcgaaaggac ggatgccgca cccggtatcc cgacctcgat atacgtcata
    35941 ccgtaagcaa acgccatcaa aatcagcgaa gccgccgcat aagcgggcgg ggcggaaaaa
    36001 ggatgcctgc ccaccctgaa gagcttatag ccgcagcgcg ggcagaacgc cgcttctcca
    36061 ctgtccaacc ggggtacatc cgcgcggcag ccgcattccg gacaatctac cgtatgcggc
    36121 ggtagggctt cgtcgcggca gttgccgcga aggctgtggg ggatattttc ggcaaacggc
    36181 ttcatcggga aagtggcaaa tataagtggc ggcattataa aggaaaaaag gcgatacacc
    36241 caatcaggat gcaaaaccgg caggttcggc agtatgaaca aacccttgtc gtccggcaaa
    36301 aatatttttt cgagcggctg tccgccgact gccgaaccca tttgataaaa tcccgattct
    36361 gtaaagaata gtaaaatacc tgcttaaaaa catcacgaaa atgatatttt ttccaaaaat
    36421 atgtgataat aaatttcgtt tatgattctt tattattttt atagtggatt aacaaaaatc
    36481 aggacaaggc g
//
LOCUS       DBBZYD010000008        33879 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.008, whole genome shotgun sequence.
ACCESSION   DBBZYD010000008 DBBZYD010000000
VERSION     DBBZYD010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 33879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33879
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.008"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..228
                     /locus_tag="ACJJDL_000324"
     CDS             <1..228
                     /locus_tag="ACJJDL_000324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573107.1"
                     /translation="NPKIQNHRKLSKKQKPSAVVPAKAGIRNRKPQKFIGKTETQKQR
                     KPNGQDSRLRGNDGSYITQKIETKQMGFPLA"
     gene            complement(504..1250)
                     /locus_tag="ACJJDL_000325"
     CDS             complement(504..1250)
                     /locus_tag="ACJJDL_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG7573108.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(1234..1413)
                     /locus_tag="ACJJDL_000326"
     CDS             complement(1234..1413)
                     /locus_tag="ACJJDL_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573109.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(1429..2100)
                     /locus_tag="ACJJDL_000327"
     CDS             complement(1429..2100)
                     /locus_tag="ACJJDL_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HGG7573110.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(2169..2840)
                     /gene="rpiA"
                     /locus_tag="ACJJDL_000328"
     CDS             complement(2169..2840)
                     /gene="rpiA"
                     /locus_tag="ACJJDL_000328"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HGG7573111.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFICIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDKPLMMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2917..3399)
                     /gene="ispF"
                     /locus_tag="ACJJDL_000329"
     CDS             complement(2917..3399)
                     /gene="ispF"
                     /locus_tag="ACJJDL_000329"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HGG7573112.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDEDSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(3431..4120)
                     /gene="ispD"
                     /locus_tag="ACJJDL_000330"
     CDS             complement(3431..4120)
                     /gene="ispD"
                     /locus_tag="ACJJDL_000330"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HGG7573113.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFER
                     HEGVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLEIGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGVRPLLIQGDVRNLKLTQPQD
                     AYIVRLLLDAV"
     gene            complement(4117..4851)
                     /gene="dnaQ"
                     /locus_tag="ACJJDL_000331"
     CDS             complement(4117..4851)
                     /gene="dnaQ"
                     /locus_tag="ACJJDL_000331"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HGG7573114.1"
                     /translation="MIQRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGKVYLAMTRRQFDLMGEAEEEEPAAKPVASAEMKLGAKLKVIKADEAELAAHG
                     QYLDGLGEACIWRKEAVPSENGGADA"
     gene            complement(5009..6319)
                     /locus_tag="ACJJDL_000332"
     CDS             complement(5009..6319)
                     /locus_tag="ACJJDL_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7573115.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRYKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(6309..6494)
                     /gene="ccoS"
                     /locus_tag="ACJJDL_000333"
     CDS             complement(6309..6494)
                     /gene="ccoS"
                     /locus_tag="ACJJDL_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HGG7573116.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6494..6793)
                     /locus_tag="ACJJDL_000334"
     CDS             complement(6494..6793)
                     /locus_tag="ACJJDL_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573117.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            7144..8340
                     /locus_tag="ACJJDL_000335"
     CDS             7144..8340
                     /locus_tag="ACJJDL_000335"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG7573118.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTAGSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            complement(8976..10817)
                     /locus_tag="ACJJDL_000336"
     CDS             complement(8976..10817)
                     /locus_tag="ACJJDL_000336"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HGG7573119.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPRAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            10908..11378
                     /locus_tag="ACJJDL_000337"
     CDS             10908..11378
                     /locus_tag="ACJJDL_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HGG7573120.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSVLEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            complement(11449..12261)
                     /gene="hpnC"
                     /locus_tag="ACJJDL_000338"
     CDS             complement(11449..12261)
                     /gene="hpnC"
                     /locus_tag="ACJJDL_000338"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HGG7573121.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLDALRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(12348..12830)
                     /locus_tag="ACJJDL_000339"
     CDS             complement(12348..12830)
                     /locus_tag="ACJJDL_000339"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7573122.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDSELVRIEDVGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            13303..13524
                     /locus_tag="ACJJDL_000340"
     CDS             13303..13524
                     /locus_tag="ACJJDL_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573123.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPAAEAAAT
                     EAPAAEAPAAEAAATEAPAAEAPAAEAAK"
     gene            13634..15001
                     /locus_tag="ACJJDL_000341"
     CDS             13634..15001
                     /locus_tag="ACJJDL_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HGG7573124.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLIIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAVPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(15182..17167)
                     /locus_tag="ACJJDL_000342"
     CDS             complement(15182..17167)
                     /locus_tag="ACJJDL_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HGG7573125.1"
                     /translation="MISLFFSILYTSPLLAVDYVYDNSKLTNEQIDRLKKLRDKSSEY
                     WKQETYLLKPTNGSSQNSLKVPALYSKTHQFKNINNSKKISFYDKEYTEDYLVGFARG
                     FGVEKRNGEEEKTLQQYFKDCVNTGNSNNDKCEQPSFENSGPRLIKSDIFALAPQIKN
                     SHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFHYIEVTDNSHVIGQTISLDE
                     FRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAGGARFRFAYDLKDKVS
                     ETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNGTADKHAFRLSGKHQKGIYT
                     LSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLNDKNSDIFDRTLPRKGLWLR
                     VIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQLSVGLMSGQAEQRSTFRNP
                     DTDNLTTGNVKGFGAGIYATWHQLQDKQTGAYADSWVQYQRFRHRINTEDATERFTSK
                     GITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLGVNGKFSDSENAHVNLLGSR
                     QLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGVEIDGERRVINNKTAIESQL
                     GVAVKIKSHLTLQASFNRQTSKYHQAKQGALNLQWTF"
     gene            complement(17583..18029)
                     /gene="smpB"
                     /locus_tag="ACJJDL_000343"
     CDS             complement(17583..18029)
                     /gene="smpB"
                     /locus_tag="ACJJDL_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HGG7573126.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(18084..19094)
                     /gene="waaF"
                     /locus_tag="ACJJDL_000344"
     CDS             complement(18084..19094)
                     /gene="waaF"
                     /locus_tag="ACJJDL_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HGG7573127.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            complement(19225..19300)
                     /locus_tag="ACJJDL_000345"
     tRNA            complement(19225..19300)
                     /locus_tag="ACJJDL_000345"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19265..19267),aa:Asn,seq:gtt)
     gene            complement(19491..20243)
                     /locus_tag="ACJJDL_000346"
     CDS             complement(19491..20243)
                     /locus_tag="ACJJDL_000346"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HGG7573128.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEVRYPDSLNELVCAAIATPLGEMLAVFGGKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFQCRLKTFATPLEMI
                     GTAFQKQAWDALLAIPYGETRSYKEQAQHLGNPKAVRAVAAANGQNKVSVLIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            20554..21078
                     /locus_tag="ACJJDL_000347"
     CDS             20554..21078
                     /locus_tag="ACJJDL_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HGG7573129.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGDNAPPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHRVVADIPADVRRRN
                     AASLQLSRCASIADDPSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSAASA
                     ALCGTSSSVSTAAA"
     gene            complement(21818..22963)
                     /gene="dapE"
                     /locus_tag="ACJJDL_000348"
     CDS             complement(21818..22963)
                     /gene="dapE"
                     /locus_tag="ACJJDL_000348"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HGG7573130.1"
                     /translation="MTETQSLELAKELISRPSVTPDDQNCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARGELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYEGILARLLAGNAV"
     gene            complement(23077..23697)
                     /locus_tag="ACJJDL_000349"
     CDS             complement(23077..23697)
                     /locus_tag="ACJJDL_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HI_0552 family protein"
                     /protein_id="HGG7573131.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPDYNRWLDNFDTEKYASFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGRQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(23731..24240)
                     /locus_tag="ACJJDL_000350"
     CDS             complement(23731..24240)
                     /locus_tag="ACJJDL_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG7573132.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGNTFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(24335..24886)
                     /gene="azu"
                     /locus_tag="ACJJDL_000351"
     CDS             complement(24335..24886)
                     /gene="azu"
                     /locus_tag="ACJJDL_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HGG7573133.1"
                     /translation="MKTYLALISAAVIGLAACSQEPAAPAAEATHAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(25167..25589)
                     /locus_tag="ACJJDL_000352"
     CDS             complement(25167..25589)
                     /locus_tag="ACJJDL_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HGG7573134.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLAPKPEKPPKTNT
                     LHLSKAALESFGSAAVKLEKRHPELAEALANLVRRHGA"
     gene            25720..28470
                     /gene="secA"
                     /locus_tag="ACJJDL_000353"
     CDS             25720..28470
                     /gene="secA"
                     /locus_tag="ACJJDL_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HGG7573135.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHTLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPIQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            28614..30386
                     /gene="dnaG"
                     /locus_tag="ACJJDL_000354"
     CDS             28614..30386
                     /gene="dnaG"
                     /locus_tag="ACJJDL_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HGG7573136.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETINRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            30573..32501
                     /gene="rpoD"
                     /locus_tag="ACJJDL_000355"
     CDS             30573..32501
                     /gene="rpoD"
                     /locus_tag="ACJJDL_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HGG7573137.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            32648..33642
                     /locus_tag="ACJJDL_000356"
                     /pseudo
     CDS             32648..33642
                     /locus_tag="ACJJDL_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT         8645 a         9596 c         7972 g         7666 t
ORIGIN      
        1 aatccaaaaa tccaaaatca caggaagtta tcaaaaaaac agaaaccatc cgccgtcgtt
       61 cccgcgaaag cgggaatccg gaaccggaaa ccacaaaaat ttatcgggaa aaccgaaact
      121 caaaaacaac ggaaaccgaa cggacaggat tcccgcctgc gcgggaatga cggctcatac
      181 atcacccaaa aaattgaaac caaacagatg ggattccctc ttgcgtgagg ctgacagatg
      241 ccgtctgaaa gactttcaga cggcatagct ttttctcttt gaatttatag tggattaaca
      301 aaaatcagaa caggcgacga agccgcagac agtacaaata gtacggaacc gattcactcg
      361 gggcttcagc accttagaga atcgttctct ttgagctaag gcgaggcaac gccgtactgg
      421 tttttgttaa tccacgataa atttgccaca aaaaagctgc ctcaaatgaa tacccgggca
      481 gctttttgtt gatatgactc caatcagcgg tgttgcggat tgtaacgttt ttccaaacgc
      541 aggaatatcc agcctaagaa agtcgtcatc aacagataaa tcagggcgac ggtgtaaagc
      601 ggttcttcat aaaccgaata ccggcccgta atcgtattct gaacatacgc caactccgcc
      661 acagcaatga ccgacagcag cgagctgtct ttcaagagcg tgatgaactc gctcgccaaa
      721 ggcggcagca tgcggcgcaa tgcctgcggc agaatcacat agcgcatcgc ctgcggatag
      781 gtcagcccca aagaacgcgc cgcctccatc tgtcctttgt ctatagactg gatgcccgcg
      841 cggaaaatct cacagatata cgcccccgag ttggcgatca gtgccaaaga accggcaatc
      901 agcggcccgt atccgcgacg cagcgcgatt gccgcctcgc cgctgaccaa aatgccgtct
      961 gaaggatgga cgaaaaacgg aaaccacaca tacgcccaaa tcacaatctg cacaaacagc
     1021 ggcgtacccc ggaacagcgt aacatacagc agcgaaactt tacgcaacgc ccacgccagc
     1081 acgcgcatcg gcgcaccggc tttttccaag tgaatcaggc gcgccaacgc caacaacaga
     1141 cccaataccg aaccgcccgc cgtcgccacg accgtcagcc ccaaggtcgt cagtgcgccg
     1201 taaaggaaca tccagcggta ttcgtaaata atgtcaaaac gaaaatccat ataccgtccg
     1261 tatcaaaaac cggcggaact gccgccgttg caaaataatc cgccatttta ccgtaaaaac
     1321 cgccgcctga acttttttat cgcggcagac ggcggttgcg cgtctccgca aaaatgcagg
     1381 gcgcgcggtt ttcagacggc atttgccgtt caaagccgtg cggtgtcttt accaaatgcc
     1441 caaccattcg cccacggcat ccatccaatc cttattgccc ccgccgctcc tgcctgctcg
     1501 gcggtacgcc cacggcgctt gcggattttt agctttccac aatcctttgc gttccctttc
     1561 cgcctgaatt tgagcgtcgg catagtcggc aaaatccgcc ttatcctgct gttctttagc
     1621 ataactttta taatgccacg ccgccccgtc ctgcacctgc atcaggttca aatcggtttt
     1681 gccgacagaa acctgcgcca cttcgcgctg gtagcggtcg gtgtcgaaca cgcgcacgct
     1741 gactttcctg ccttccgccg ccgcgcgcag gttgtcgcgc gaacgcgtgc cgtaagcctg
     1801 tttcatctcc ggcgcgtcga tatacgccat ccggattttg tgtttcgcgc cgtcgccgtc
     1861 gataacgtga agggtgtcgc cgtcatagac tttggacacc gtgcctgtgt agcggtggcc
     1921 ggatttcgcc gatgctcggc ggcgggcggg cgcgtcggaa cccgcgtccc ctgccgcgcc
     1981 gagtacgtcg agtacggcaa ccgccgtccg caccgcctcg ctgccgtacc ccgtataacc
     2041 caacgcaccc aaaagcgaca gggcgacggg aagccatttc atgatttttt taatctgcat
     2101 atttttcaaa tgccgatgcc gtctgaacat ctctgaaccg gatttcagac ggcatcttaa
     2161 cgtcaggatt acccttggca gggatagatg actttcgcac cctcttccgt ccccaaaatc
     2221 aacacatcgg cggcatcgcg ggcgaatatg ccgttttcga gtacgccggt gattttgttg
     2281 atttcgtctt ccatcatcag cggtttgtcg atattcaagc cgtggacatc gacgatttgg
     2341 ttgccgtaaa acgtggtgta gccgatacgc agttcgggct gtccgcccat agcgagcagt
     2401 ttgcgcgaaa caagggaacg cgcgctttcg acgacttcca ctggcagagg gaatttgccc
     2461 aaacgtgaaa catatttgct ttcatccgca atgcagatga atttttctga tgcgctggcg
     2521 acgatttttt cgttgaggtg cgcgccgccg ccgcctttaa tcatttgcag ggcgtggttc
     2581 acttcatccg caccgtcgat atagaccgcc aaccccgata cttcgttcaa agaaacgacg
     2641 ggaatatcat attgggcaag cagttcgctg gattttttgg aagtagatac cgcgcctttg
     2701 atttttttgc cgctcttacc caaggcttcg atgaaaaagt tgatggtcga gccggtaccg
     2761 atgccgatgt attcgttttc gggtacgaat tcgactgctt tttcggcggc gatgcgcttg
     2821 agttcgtctt gtgtcgtcat atttttgtcc tttgggaaac cgtatcaaca aacagccgtc
     2881 atcttaacat ttttttgcac gtcctgcccg ccgcgttcaa atccgtacca gcaataccgc
     2941 cgcctgcgcc tctatgcctt ccatgcgccc gagataaccg agtttttcgt tggttttgcc
     3001 tttgatgttg acgcacgaaa tgtctatgcc caaatcggcg gcgatgttgg cacgcatttg
     3061 cggaatatgc ggcgcgagtt tgggtttctg tgcaatcacg gtcgtatcga cattgaccgc
     3121 ctgccaaccc tgcgcctgaa cgctttgata cgccgcacgc aaaaggacgc ggctgtcctc
     3181 atctttgaac tctgcggcgg tgtcggggaa atggctgccg atatcgccca aacctgccgc
     3241 accgagcagc gcgtcggtaa cggcgtgcag cagcgcatcg gcatcggagt gtccgagcag
     3301 ccctttttca aatgggattt caactccgcc aagtatcagc tttctgcctt cggtcagttg
     3361 gtggacatcg tagccctgtc cgatacggat gttcgtcatc gtttgtgttc ctgatggttt
     3421 gaattgaagt tcagacggca tcgagcagca gcctgacgat gtatgcgtcc tgcggctgcg
     3481 tcagtttcaa attgcgcacg tcgccctgta tcagtagcgg acgcacaccc aatttttcca
     3541 cggcggacgc ttcatcggta atgccgtcca agttttccgc agccaatgcg cggtgcagca
     3601 gcccggcgcg gaaaagctgc ggcgtttgcg cctgccaaag gctcgtccgc tcgacggttg
     3661 cactaatgtt cccaccgtcc gcgcgcttga gcgtatcggc aacgggaatt gccaaaatcc
     3721 cgccttcggc ggcgttgccc gcctgttcta tcaaacgcgt cagagcttca gacggcaggc
     3781 agcagcgcgc ggcatcgtgt accaaaatat tgtcggtttc cgccgccaaa ccgatttcca
     3841 acagttttgc cacaccgttt cggacggttt cggcgcgggt ctgtccgccg tttttccaca
     3901 cccgaacctg tggaaatgcc gtctgaacct tatcggcaaa cgtgtcttcg ggcgagacga
     3961 caacgacggt caaatcgacg ccctcatgcc gttcaaaaat cccaatcgta tgttctaaaa
     4021 cggttttgct tccgatttcg acatactgct taggtttgtc cgcaccgaaa cgcgccccga
     4081 tgccggcggc gggaatcagc gcgatatttt tgcgcttcat gcgtccgccc cgccgttttc
     4141 cgacggcacg gcttccttgc gccagataca ggcttcgccc aagccgtcca aatattgccc
     4201 gtgcgccgcc agttcggctt catccgcctt aatcactttc agtttggcac cgagtttcat
     4261 ttcggcagat gcaacaggtt tggctgccgg ctcttcctcc tcggcctccc ccatcaggtc
     4321 gaactgccgc cgcgtcatag caagatagac tttgcccaaa agttcgcagt cgatcaatgc
     4381 gccgtgcagg acgcgcttgc tgcggtcgac ggaaaaacgg ttgcacaagg catccaggct
     4441 ggctttctgc ccggggaaca tttcgcgcgc catcgccagg gtatcggtaa cggtacagcc
     4501 gagttcctcg acagtcggca gccccatccg gcggaactcc atattgagga agcccacgtc
     4561 gaatttggca ttgtggataa tcagttccgc accgcgcagg aaatcggcaa tctgcctgcc
     4621 gacctctgca aacggcggcg cgtttttccc ttccaaaacc tctatcgtca gaccgtgcac
     4681 cctcgccgcc tcttcgggca tatcgcgctc ggggtggaca tagaggtgca ggtttttgtc
     4741 ggtcatttgg cggttgacca tttctaaacc ggcaaactcg accaagcggt cgccgccgtc
     4801 ggcatacaga ccggtggttt cggtatcgag gatgatttgg cgttgaatca tgtctgcttc
     4861 tttcttcaaa ttttccatct gctgactatt ttttaagcaa tatatttttc tgttttcatt
     4921 tcaatgcaca aacccactta ttcacagtgt gttcacaaca ttgggcaggc ggattgtgta
     4981 ttttggggac aattttttca gacggcattc aaggtttttt cctgattgcc gccgcgccta
     5041 aaaaccgcct ttcgcgctta atcaaaaata ccgacaacgg aatattgccc aaagcgacaa
     5101 tcagatacaa caaggaaatg ctgtcaaaca aaaacagcaa caccgcgctc aaaacggcgg
     5161 cggaaaccat aaaaataccg ttaacgatat tgttggcggc aacggcgcgg gcgcggaaag
     5221 tctcgctact ggcggtttgc agccaagtat agagcggaac ggagaaaaat ccgccgaaaa
     5281 agccgatcag cgtcatcacc gccatcacgg gatatgccca tccttgcgat aaaaaccaaa
     5341 aaatgccgtt cagcccttca aaacggtgtc cgtgcgtcag ccacaccaaa accaggccgc
     5401 aaaccgtcaa acccaacgca ccaaccgtta cccaagccaa catcagccgt tccctgctga
     5461 acttggcaca cagtaccgaa ccggcggcaa taccgatgga aaacagggca agcatcaggt
     5521 tgaaaacatt gtcgttgccg cccaaatgga tttgggtaaa ggtcggcagt tgcgtagtat
     5581 agaccgcgcc gacaaaccaa aaccacgaaa taccgataat agcggtaaag acgggtttgt
     5641 accgcaccgt ttcacgaagc agggattttg tgccacggac aatattccac tcaatttggg
     5701 tatcggcagc cttggcgggg acggacggca taaacaggct gccgaccgtg cctccgacgg
     5761 cgaccagcaa aaccagtatc ccgacaatat aaggcggtac acctgccacc gccgttccca
     5821 aaatctgacc gaacaggatg gcgacaaacg tacccgattc aatcaggctg ttgcccatca
     5881 tcaactcttt gtcgtcgaga taatcgggca ggatggcgta tttcagcggc ccgaacagcg
     5941 tcgattgcgc gcccatgcaa aacagacacg ccaaaagcag cggggcagac cggatataaa
     6001 acccgtatgc cgccaccgcc ataatgatca tttccagcac cttgacccaa cgcgccaaaa
     6061 cggccttgtc gaatttgtta cccaactgcc ccgacagcga ggaaaacagg aaatacggca
     6121 aaataaacaa caacgcgccc aagttcaaca tctgtccggc aggcaggaag ccgttttgcc
     6181 ccaaaccgta aaacccaatc atcacaaaca gcgcggtttt gaacacattg tcgttgaacg
     6241 cgccgagaaa ctgcgtagcg aaaagaggtg cgaaacggcg gcttttaacc agtcccaaac
     6301 cgcctttttt agcgtacatc gttttccctc tctttttcaa tcagtttact tgtcgaatca
     6361 tcatccatca ggatgcggtg cgccggccct tccaagtcgt caaactgccc gtttttgccc
     6421 gaccaccaaa aaaaccagcc gatgacaaac gccaaaataa tgctgatggg caccaatata
     6481 aacatgcttt ccatcacata ttccctgtca aatcgttcaa aacaaaagtc tgccccgaca
     6541 cggtcagata ttcgttacgc aaagttccga cgggagcttc gtcaaaaaac agctcgatac
     6601 ggtctttgac cacgcgccaa tattggggaa tttccgtctg accgaacggc gacaggacat
     6661 gattttccat tccgccttca agtttgacgg caaaacgccc gctttgcggc cgtgcttccg
     6721 attcgtcgtc ggcaagcagg atgaaaaagc ctatatgccg tcccgattgg tcatgaatac
     6781 tgaaataatg cataaatttc ccacccgcct tttttcagac gacaccaact aaaaacaggg
     6841 cgaatgtacc agtttggacg ggaagaatgc aaagaaattc tccctccccc agccgaaaac
     6901 accggcaaac cgcatatccc ccttttttcc gtcaaaatac ccgacttccg ccattttcac
     6961 gcaaacgccc gattaagcca agcaattgca aagatttttt gttagaatag cctgcttctt
     7021 ttatcaaccg tttcagacgg ccccactact ttcccgccta ggaaggcaaa acggattcgg
     7081 cacgaatccg gttagtatcc gtgtccgatt ccaatgccgt ctgaaacttt ccggagtaag
     7141 aaaatgtccc aaaaattgat cttggttttg aactgcggca gctcgtccct caaaggcgcg
     7201 gtcctggata acggcagcgg cgaagtcctg ctcagctgcc ttgccgaaaa actcaacctg
     7261 cccgatgcct acatcacatt caaagtaaac ggcgaaaaac acaaagtcga tctgtccgca
     7321 catcccgacc acaccggcgc ggtcgaagcc ctgatggaag aactcaaagc ccacggcctc
     7381 gacagccgca tcggcgccat cggccaccgc gtcgtcagcg gcggcgaact gtacagcgaa
     7441 tccatcctcg ttgacgacga agtcattgcc ggcatcgaaa aatgcatccc gctcgccccc
     7501 ctgcacaacc ccgcccacct cttgggcctg cgtgccgcgc aaagcatttt caaaggcctg
     7561 cccaacgtcg tcgtattcga tacctccttc caccaaacca tgcccgaagt cgcctacaaa
     7621 tacgccgttc cgcaggagtt gtatgaaaaa tacggcctgc gccgttacgg cgcgcacggt
     7681 accagctacc gcttcgtcgc cgacgaaacc gcgcgcttcc tcggcaaaga caaaaaagac
     7741 ctgcgtatgg tcattgccca cttgggcaac ggcgcgtcca tcaccgccgt cgccaacggc
     7801 gaatcgcgcg acaccagtat gggcctgacc ccgctggaag ggctggtaat gggtacgcgc
     7861 agcggcgaca tcgatccttc cgtattcggc ttcctcgccg aaaacgccaa tatgaccatc
     7921 gcccaaatca ctgaaatgct gaataaaaaa tccggtctgc tcggcatttc cggcctgtcc
     7981 aacgactgcc gcaccattga agaagaagcc gccaaggggc ataaaggcgc gaaattggcc
     8041 ttggatatgt ttatctaccg ccttgccaaa tacatcggca gtatggcggt tgccgcaggc
     8101 ggtttggacg cactggtctt taccggcggc atcggcgaaa actccgacat catccgcgaa
     8161 cgcgtgatcg gctacttggg cttcctcggt ctgaacatcg accaagaagc caacctgaag
     8221 gcacgcttcg gcaacgccgg cgtgattacc actgccggca gcaaagccgt tgccgtggtc
     8281 attccgacca acgaggaatt gatgattgca cacgataccg cccgcttgag cggtctgtaa
     8341 gattcaatcc ccacgcgaac tgcctccgaa aacggaggca gtttttttat ccggctttcc
     8401 atgcttaaac agcactgcct cttttcagac attgacggtt gcagccgctt acctgaacct
     8461 tatagtggat taacaaaaac cagtacagcg ttgcctcgcc ttagctcaaa gagaacgatt
     8521 ctctaaggtg ctcaagcacc aagtaaatcg gttccgtact atttgtactg tctgcggctt
     8581 cgtcgccttg tcctgatttt tgttaatcca ctatatccga ctttccatac ttaaacagca
     8641 ctgcctcttt tcagacattg acggttgcag ccgcccacct gaaccttaat gattgactat
     8701 tttttaatca tgttattatt ttccataaaa tacatggcat taagatgttt ttccacaaaa
     8761 gatacacaca ccggcaaaca ccggctgtgt ttatcttttc ttatgcctat tttttaatca
     8821 tcgtattttt atcttttaat ttcaatacgc aaactaactt atacacacgg ttttcacatc
     8881 tttagactgc ttccgtgtgt atagtggata ttgccgtttt cctttctgac aaaaatgccg
     8941 tctgagaact tcagacggca tttgaaacat cggaatcagc ggttttgttc ataccactcg
     9001 ataaacttgt ctgctttgac aaaacccagc agcggctcgc tgcggctgcc gtcggagcgg
     9061 acgacaaaca cgcccggcgg cccgaacaga ccgtattctt tcaacaacgc ctgatgttca
     9121 ggcgtgttgg cggttacgtc gatttggaaa aagcgttcca tatcaaccgc ctgatgcact
     9181 tccggctgat tgagcgtgta tgccgccatt tctttgcagg aaatacacca gtcggcataa
     9241 aaatccaaaa cgacgggttt gtcgggatgt tctttcaacg ccgtatccat cgctgccttc
     9301 agcgcggcag tatcggcaaa cattttgccg tgttccgaag atttgcctgc ttcggctggt
     9361 ggattgaggg tcaggaaatg gtgcagcgcg gtcgttttgc cgtttgcgcc ctgccagccg
     9421 aaccacgcgc cgcctatcag caatatgccg cccaatgcga atgccacagc tttcggacgg
     9481 cgtttctgcc tgcgtccgtt gaccagcagc atacaggcag gaaccagcat cagcagcgtg
     9541 tacagcgcga cgacgagata atagggcaag tgcggcgtgg cgaggtaaac ggcgacggca
     9601 agcaggataa agccgaaagc gtatttgacg gcattcatcc aatcgcctgc cctaggcagg
     9661 atatgcccgc cgaacgtgcc gatggcaatc agcggaacgc cggtgcccaa cgccaaagtg
     9721 taaagtgcca aaccgcctaa aaccgcatcg cccgtctgac cgatgtagcc caaagcaaat
     9781 gccagcggcg gggcgacgca cggcccgaca atcagcgcgg acaatatgcc cataataaag
     9841 acggaaacga ttttaccgcc tgaaagcctg ctgctctggt tttggaaata cgactgcacg
     9901 gcgttgggaa gctggatgtt gaacagcccg aacatagaca gtgccaagac gaccattaaa
     9961 gccgatgccg ccaacaccac ccaagcctgc tgcaaccata cggtcagcag cgcgcccgtc
    10021 agtccggcaa caatgccgac cagcgtataa gtcagagcca aaccctgaac ataaacgacg
    10081 gacagcacaa acgcccgcgc cttgcccgcc tttttgtcgc cgaccacaat actggaaaca
    10141 atcggcaaca ggggatacat acaggcggta aaactcagac ccaaaccggc gagaaaaaac
    10201 gccaaaagat tggcgttgag cgtatcccaa gacagcttga aacggctgtc gccgccctca
    10261 tcccccttcg ggggcggcaa cgccccgctg ccgttttgag aggaaggctg caaaaagcgg
    10321 tctttggcgg atgccggttc gtcggtttgc ggatggtaag tgccgttgcc ggaaatatca
    10381 aactcggtat ccacgggcgg atagcacacg ccggcttcgg cacagccctg ataggtcaaa
    10441 accaatttat acggttcgcc gacagccttt gcataaggaa aggcaacctg cgcttcgtga
    10501 tggtaaaccg tctgcctgcc gaaaaactcg tcttccttct cttcgccctt gctgaaagaa
    10561 ggctgtccca acaaatccgc cggatcggtc ttgccgacga ttttcgcctg atacatatag
    10621 tatccgtcgg caatcctgaa acggacgttc acaccgtcgt cggcaacggc aagctccggc
    10681 acgaatgcct tttccggcgg cagcagatcg ttcgcatcca gcgcgaaagc tcgtccgcac
    10741 aacatcaaaa atacggcgaa caggcaaatc agttttttca taatcgaatc cgtttcagac
    10801 aaataatttg tctgcattat aaatggtaag gttgacggtg ggatttaatt tatgtaaaac
    10861 ccgccattat ccgaacctat ttccataaac atcttaccga acccgccatg tacgatgtca
    10921 atacccacga tgtccgccgc tttttcgccc gcgtgtggca gcagcggctc aatccgctgc
    10981 aactgagcgt actggaacag aaagccctcc gcattatcga agcccatccc gaataccacc
    11041 gttatctcga acgcatcgaa gaccatctgg acaccgactg gctacccgaa aacggcgaaa
    11101 gcaacccctt cctgcatatg tcgctgcatt tgtccgtcca agaacaggcg ggcatagacc
    11161 agccgcacgg catacgcgca atccacgaca ccctgtgcgc caaacgcggc tggctggaag
    11221 ccgaacacga aatgatggag gcactggcgg aaacactgtg gacggcgcaa cgctacggca
    11281 ccggtttgga tgtcaatttc tacatgaccc gactgcgcaa actcatcggc ttgggtgcag
    11341 aagatcaagc taggttgaac ccgcatgaaa tcgcctgacc acaccaaccg cctgcaaaat
    11401 gccatctgaa gcggaacaac ccctttcaga cggcatgcat ttcccccatc atttccacaa
    11461 cgcgcgtttc agcataatca accaatcctt cttatccaaa acggggcgtt gtgcaaacac
    11521 atcgtatcgg cacgcgtcca gtttctgcaa aatcaactgc gcccccaaca caatcatacg
    11581 gagttccaaa ccgatacgcc ctttcaattc gcgcgctaaa ggcgaacccg ccttcagcat
    11641 acgaaatgcg cgccggcact catacgccat cagccgctga aacgccgcat ccgccctacc
    11701 ctccgcaatc tgtccttcgg aaacaccgaa tttcaacaaa tcgtcctgcg gaatataaac
    11761 cctgcccttt tgccaatcca cagccacatc ctgccaaaaa ttcaccagtt gcaaagccgt
    11821 acagatgccg tcgctttgcg ccacgcacac cgcatccgtt ttcccgtaca aagccagcat
    11881 aatgcgtccg acagggttgg cggaacgccg gcagtaatcg gccagttcgc cgaaatgcgc
    11941 gtaccgcgtt ttaaccacgt cctgcgaaaa cgccgaaagc aaatcataaa acggctgcaa
    12001 atccaaaccg aacggcacaa ccgcctcggc atccaatcgt gcaatcaaag gatgcgccga
    12061 ccggccgccc gatgccaaca cgtccaactc gcgccgcaaa gcatccaacc ccgccaacct
    12121 ggcttcagac ggcatactgc cctcgtccgc catatcgtcc gccgtccgtg caaacgcata
    12181 caccgcatga accggcttcc tcaacctgcg cggcaaaatc agcgaaccga cgggaaaatt
    12241 ttcataatgc ccaaccgaca taccttctcc atccatcaaa caaaatgccg tctgaaacgg
    12301 aacaaaccct tttcagacgg catcagatac ctccaagctg ccggcaatca gtggtggtga
    12361 tgaccgtgcg ggccgtggac atgaccgtgt gcgatttcct catcggatgc atcgcgcacg
    12421 ctttcaaccg tagccttaaa acggattttc atgcctgcca aaggatggtt gccgtccacc
    12481 accgccttgc cgtcggcaac atcggttaca cgatagacga caacatcgcc ggtttcagga
    12541 tcgtcggctt caaacatcat gccgacttcg acttcaacag ggaacacgcc cacatcttca
    12601 atacgaacca actccgaatc ctgctcgccg aacgcatcgt cgggcgaaag cgccacatcg
    12661 accgtatcgc cggcatcctt accgtgcaac gcctcttcca ccaaagggaa aatgccgtcg
    12721 taaccgccgt gcagatacgc aatcggttct tcggttttgt ccaaaagctg attgttggca
    12781 tcatacatct cataatgcag cgaaaccacg gaattcttca cgatagccat atttgtcctt
    12841 tcaggaacag cagattgatt acaggcgcat tctaacacaa ccgccgcgcc ggccgattac
    12901 cgttaacctg ttcataaact gtacagcaca tatttcaatg taaatttttg ttattttatt
    12961 gcgatgtaac ttttttacaa cattattaaa accattccga cctgtctgcc gactttccca
    13021 atccgcctta ataaatcata caagatactg aaattatatt aatctctata atatttatcc
    13081 ctatcgaatt tttaacagca aaaccgtttt acaggattta tcaatccgcc cgccagaaaa
    13141 cttttcattc aaaccttttt cccatctgta cgacattgca atcccttatt ccatagtgca
    13201 taattacgca aattcagcga tgaatttcca acccggtttg tagtatggtc gataaagacc
    13261 tatttgtttc aataatttaa attggttcta aaggttacta aaatgaaaaa atccctgttt
    13321 gccgctgctt tgttgtcttt ggtcctggca gcctgcggcg gtgaaaaagc cgctgaagct
    13381 cccgctaccg aagcacctgc cgccgaagct cccgctgctg aagctgccgc tactgaagca
    13441 cctgccgccg aagctcccgc tgctgaagct gccgctaccg aagcacctgc cgctgaagct
    13501 cctgctgccg aagctgcaaa ataagcattt tccgcttgca aaaaagcagg atacgttcag
    13561 tatcctgctt ttttgatttt tcagacggca tcagattccc ttcctcaatc ttctccctac
    13621 ccttccgaca aacatgcctg accttcatac cgaattttcc cgactcctgc cggcagatga
    13681 aattgccgaa ctttctccga cgcttttaaa agaccagcgc aaccgcttta cgtctgcacc
    13741 agacatcatt ttgcagccgc gcagcgttga aagcgtgcaa accattatgc gtttttgtta
    13801 cgaacaccgt attccggtta cgccgcaagg cggcaatacc ggtttgtgcg gcgcggcagt
    13861 atcggaaaac ggcgtattgc tgaacctttc caaactcaac cgcatccgca gcatcaattt
    13921 gtcagacaac tgcataaccg tcgaagcagg ttccgtactc caaaccgtcc aacaggcagc
    13981 cgaagcctca aacaggctgt tcccactcag tctcgccagc gaaggctcct gtcaaatcgg
    14041 cggcaacatc gcctgcaatg ccggaggttt gaacgtattg cgttacggca cgatgcgcga
    14101 cctgattatc ggtttggaag tcgtcctccc caacggcgag ctggtttccc atctccatcc
    14161 cctgcataaa aacaccaccg gctacgacct gcgccatctg tttatcggca gcgaaggcac
    14221 actgggcatc atcactgccg ccacactcaa gctttttgcc cgtccctcgg acaaggcaac
    14281 ggcatgggtc ggcatacccg acatcgaatc cgccgtccgc ctgctgaccg aaacccaagc
    14341 tcactttgcc gaacgcctat gcagttttga gctgatcggc cgttttgccg ccgagttgtc
    14401 ttccgaattc agcaaattcc ccctgccgac acattcagaa tggcatattt tacttgagtt
    14461 gaccgactca ttacccgaca gcaatcttga tgatcggctc gtcgaatttc tttataaaaa
    14521 aggatttacc gacagcgtat tggcacaaag cgaacaagaa cgtatccata tgtgggcatt
    14581 gcgcgaaaac atctccgcct cccaacgcaa actgggcacc agcatcaaac acgatattgc
    14641 cgttcctatc ggacgcgttg ccgactttgt ccgccggtgc gccaaagatt tggaacagaa
    14701 ttttaaaggc atacaaatcg tctgcttcgg acatcttggc gacggcagcc tgcactacaa
    14761 tactttcctg cccgaaatcc tcagcaatga agtctatcgt tacgaaaacg acatcaacga
    14821 cgcagtttat cgcaacgttc ttgcctgcaa cggcacgatt gccgccgaac acggcatagg
    14881 tatcatcaaa aaacagtggc tggacaaagt acgcacgcct gccgaaatcg ccctgatgaa
    14941 aagcatcaaa caacaccttg atccatataa cattatgaat ccgggcaaac tgcttccgta
    15001 accggcattt ctgatttgca tacacaacaa agaaagggac aatagatccg attgtcggtt
    15061 tagcgcgagc tcgtgagtgc ggtaaaaaat tggtggaaat gacacgaaaa atgaccgcat
    15121 ttttaaaata aaaaaatcgg cagtgaattt ccctgccgat tttattttgt tacaacttaa
    15181 cttaaaacgt ccactgcaaa ttcaacgcac cttgtttagc ctgatgatat ttgcttgttt
    15241 ggcggttgaa tgaggcttgt aaagttaagt gagatttgat tttcactgct acacctaatt
    15301 ggctctcaat tgccgtctta ttgtttatca ctcgacgctc tccgtctatt tccacaccga
    15361 aaggtttgtt gtggtaaagc gcgttcacag cggcgaaagg ttcaatagcg atatttttat
    15421 agagtgaaaa ttgagcttta gcttgaacgc caacccgagt ttgtaattgg cgggagccaa
    15481 gtaaattcac gtgggcattt tcgctatcgc tgaattttcc gtttaccccc aaataagtca
    15541 attgtgcctg tggttgtagg taaacacgaa ggctgttgcc ctttttagtg aagtgttctg
    15601 ccaataaagc attgtaaccc gcttcaattg aggcggtaat accttttgaa gtaaaacgtt
    15661 ctgtagcatc ttcagtgtta atgcggtggc ggaagcgttg atattgtacc cagctatccg
    15721 catacgcacc tgtctgtttg tcctgaagct gatgccaagt ggcataaatg cccgccccaa
    15781 agcctttcac atttcccgtt gtaagattgt ctgtatctgg attgcggaaa gtgctgcgtt
    15841 gttctgcttg tccgctcatt aagccaacgg aaagttgatt actttcgttt tgccatgtga
    15901 atacttcgcc accgagttgc acacctttac gatagccttc tacaggtgct gttttgcctt
    15961 gcacccattg gttggaatgt ccgtcaatca cacgcaacca caagcctttg cgtggtaaag
    16021 tgcggtcaaa aatatcgctg tttttgtcgt tcaaacgcaa ggcgaataag gtattggcgg
    16081 cttgagcctg ttgtgcataa atcgaaatat catcgcgttc ttgcactttg gtaaaaaagc
    16141 cttctgggcg ttgttgtaaa gaaagcgtat aaattccctt ttggtgtttg ccagaaagac
    16201 ggaatgcgtg tttatctgct gtgccattta ctttgataat ttgatgcccg tcgagacttt
    16261 ttaaatcgtc tattggattt tcgaagatga tgtcggaagt gccagttata tttttttcaa
    16321 aagttaaaac tggtgtttca gagactttat cttttagatc gtaagcaaaa cgaaaacgag
    16381 ctccgccagc ataatcttct tttacgagta aactttcact tttagtatta aaacggatgt
    16441 ctgcattcgt tgtttttaat tccccaacat cagaatccca acggggttcc cagagagaat
    16501 tttctaagcg gaattcatcc aaactaattg tttgtccgat aacgtgtgag ttgtctgtaa
    16561 cctcaatata gtggaatgga tctaaaccag aatagagatg ctcttgccaa ctaggaagct
    16621 tattaagtgt tgggcgaagc cattcgatat aattacctac agataaaatt tcgctgttga
    16681 tatggctatt ttttatttgt ggagctaagg cgaaaatatc gctctttatt aatcttgggc
    16741 cagagttttc gaaggatggt tgttcacact tatcattatt ggaattccca gtatttacac
    16801 agtccttaaa atattgctgg agtgtttttt cttcttcccc atttcttttt tcaaccccga
    16861 aacctcgggc gaagccaaca aggtaatctt cagtgtattc cttgtcataa aaagaaatct
    16921 tttttgagtt gttgatgttt ttgaattggt gtgttttaga gtatagtgcg ggaactttga
    16981 gagagttctg agagctacca ttcgtcggtt ttagaagata agtttcttgt ttccagtatt
    17041 cgctgctttt atctctaagt ttttttaagc gatcaatttg ctcatttgtt aatttagaat
    17101 tgtcgtaaac gtaatcaaca gccaaaagcg gagaggtata aagaatagaa aaaaatagac
    17161 ttataataaa tgattttttt aaacttctgc ttgcttgctt cgagtttcat aataaatttt
    17221 cctttgtcaa gtaaaaataa atggggcgtg gattttagca taaaactgaa caaaaaatgt
    17281 catttagctc acatttttct ctatttattt cttatttatt aaaggtaaac gtttgctttt
    17341 tgctattttg tcaagccagt ttgaaaatgt gtataattgc cctcgttatt tacaaaaatt
    17401 tcaggaaaaa tgaccgcact ttacccttgg ctaatgccaa tttatcatca aattgctcaa
    17461 acctttgacg aaggtttggg gcatcatgct gtgctgatta aagcggatgc tggtttaggt
    17521 gtagaacgtt tacacatcag gcggcagcct tgcccatacc ctctgaagca ctgtttccac
    17581 aatcagcgcg tatgcttaat caaccgctgt ttctcgcgtt tccaatccgc ctctttcata
    17641 ctctgacgtt tgtcgtgctg tttcttacct tttgccaaac cgatttccat cttgattttt
    17701 ccgcgcgaaa aatgcaaatc cagcggcacg atggtgtagc cggcacgttc ggttttgccg
    17761 attaatttgt tgatttccga ctggttcaac aagagcttgc gcggacgtac ggcatctggt
    17821 ttaatgtgtg tcgaggctgt gggcaaagcc gtaatatggc agccgaccag ataaaacgcg
    17881 tcttttttcc aatagatata actctcttta agctgtacgc gcgcggcgcg gattgctttg
    17941 acttcccagc cttccaagac caaaccggct tcaatccggt cttcaatgaa aaaatcgtga
    18001 aatgcttttt tattgttcgc aatagccata aacatcctat caatatccgc cgtcagacgg
    18061 cataaacccg aaaacagaac ccatcatacc gcctcttcaa ccgcctgcac aatcttctcg
    18121 ggatacagcc tgttgaggca gtcggtatgc cccagcggac attcccgctt aaaacagggc
    18181 gaacattcca agtgcaggct gacgattttc gccctgtcgc tcaaaggcgg cgtatgcgtc
    18241 gggctggaag aaccgtaaac cgccaccacc ttcctgccca atgccgccgc caagtgcatc
    18301 agcccgctgt cgttgcacac aaccgtgtcc gccaacgaca gcaaatccat tgcctgcgac
    18361 aaatcggttt tgccgcacaa attgacacac ataccgtctg aaaggcagtt gatttcctcg
    18421 gcaatttcat catctttttg cgaaccgaac agccaaacct gccaacccgc cgccagataa
    18481 tgtttgccca actcggcaaa atgccttgtc ggccaacgct ttgccggccc gaattccgcg
    18541 cccgggcaaa atgccaaaac aggctttcca agattcaaac cgaaagtttc gacagaaatt
    18601 tcccgccgcc gttcatcaat ggaaaactcg gggaatcccg aatgcccgtc aaaatcttcc
    18661 tgactcggat gcgcgagagc cgtatatctg tccaccatca aaggcagacg ttccttatcc
    18721 agcctgcgta tatcgttcaa cagaaaataa cggctttcac cgacataacc cgtccttttg
    18781 gcaatacccg ttgctagcgc gatgactgcc gatttcaaag aaccgggcaa cacgataacc
    18841 tgatcgtatc cgcgccgccc caaatccctg ccgacccgcc agcggcgttt caactccaac
    18901 gcaccgtgtc cgaacggatt ctcaagaatt tcattcactt ccggcatacg ctcgaacacc
    18961 gccatcgacc acttcggcgc gaacacatca atcgtgcaac cggggtgaag ttccttcaaa
    19021 cggcggaaca agggctgggt catcacgcag tcgcctatcc aactgggaga aataatcagg
    19081 attttgatgg acataacaag aaaccgaaat cagacaggca gaattttacc gcgaaaccgt
    19141 tggaaaacct atcttgtctc attccgaacg ccgtacgtgc aaatatgaaa aagcccgaac
    19201 attcaagttc gggcttcaaa attctggctc cccgacctgg gctcgaacca gggacctgcg
    19261 gattaacagt ccgtcgctct accgactgag ctatcgggga atggggcgta ttatagcgtc
    19321 cggaaaaaat gtgtcaatcc ttaattttgg aaaaatgggc gacaaaacga caagcatatg
    19381 aatcagaaag acattaagac cgatgcctta aaaggattgc cgttgtatga atttccacag
    19441 ccgtcatcac accatattta agcccgatga gccgttctgc cctcccccgc ttaaaacaat
    19501 gccgtctgaa cttcgccgcg ttccaaagcc agtaaaaact gtttgcggtt caaaccgcct
    19561 gcgtagccgg tcagtttgcc gtcgctgcca atgacgcggt ggcagggaat caggacagac
    19621 accttgttct gcccgttggc ggcggcaacg gcgcggacgg ctttggggtt gcccaaatgc
    19681 tgcgcctgtt ccttgtagct gcgcgtttca ccgtaaggaa tcgccaaaag cgcgtcccac
    19741 gcctgttttt gaaacgccgt accaatcatt tccaaaggcg tggcaaaggt tttcagacgg
    19801 cattggaaat acaaatccaa ttcctgccgc aaaagttgcg tccgctcatc ctcccgaaac
    19861 acaaaccgtc cgcgcaaggc tttttggacg gcggcaattt cctgttccaa atgcttctgc
    19921 ccgacaaatt ccagcaaaca caagccttta ccgccgaaca ccgccagcat ctcgcccaaa
    19981 ggcgtggcaa tggcggcaca caccagctcg ttcaagctgt cgggataacg cacttccaac
    20041 agacggatgg ctcggcggat acggacatat tcttcaggcg cgcagccgat attgtcccaa
    20101 aaatcccgat cgaactgccc ggcttcgcat tccgtcagat tgggatgcgg cataacgccg
    20161 cactcaaaaa cccgggtttc gaggcaatgg cggatttcat cccattttga cggcagattg
    20221 tttaaggaag gcagggtaat cattcgtttg ctccgtatct ctatcatgga tttggcggca
    20281 aaatccccaa ttctcgtcat tcccgcacgc cgatgcagga acgggctatg acgtaaatct
    20341 tgagggttgg gttgcggcaa tgcctaaata tgcgatattt ctaaagcctc agggaaagga
    20401 attaaagact tcagacgacc tgcaaagggt cgtctgaaac cacgattttt gcatttacgc
    20461 attccggcac atcatccaac cgtttcggca cattcctgcc gccgttgaca gcctataatg
    20521 aatccactta ttcatcaagc aaaggaatca tctatgcaaa cccgcatcct ctccgccgta
    20581 ctgctggctt tttcaaccgc tgcctttgcc gggggcgcat tcacgctgca attcgacaac
    20641 ccgtccgaag acggcggctt cacgcaaaac cagcttttga gtgcgcctta cggcttcggc
    20701 tgttcaggcg acaatgctcc gcccgcgctg tcgtggaaaa atccgcccgc cgggacaaaa
    20761 agtttcgtcc tgaccgttta cgataaagac gcgccgaccg gactgggctg gatgcaccgg
    20821 gtggtcgccg acattcccgc cgatgtccgc cgccgcaatg cggcctcgct gcaattaagc
    20881 cgctgcgcca gcatcgccga cgacccgtcc gcagccatat cggcggtaat cagtttgcgg
    20941 atttgccgca tcaggttgac gccttcgtac acggcaaaac cgatgccgtc atgctgcaac
    21001 cacgccaaca cgccgcaaag cgcggcctcc gccgcattgt gcggcacttc ttcatccgtc
    21061 agcaccgccg ccgcataatc aaacgccgcg cccatccgcc cagggtgcgg cagcttcacc
    21121 gcatcgcaca ctgcctgcgc cgtcccgtat tgtgcggcaa acctttctac ggtttcctgt
    21181 tcgaaagcaa tccattgcgc ctgatagagg ccgtctgaat cgggaatatt aataacgtca
    21241 aacgtctgtc cgcctgccaa cgcaaccgcc tcacccgccg caatcctcaa ttcgcgcctc
    21301 gcccaccgca gcttcttgct tccgcgccgc acgataagca cagctggttc atataccgcc
    21361 acgctgcggt acaaggcggt atgatgttgc acgatgccgc ccaaagcacc caatcgttcg
    21421 cgcgtatgaa agtaatttga cggcactatt atctccaaca cgcagggccg cacataaggc
    21481 gcagccctgt ttaccctgat ttggaagggg ttacttccca aaaataaacc aaaatcccac
    21541 tgccccgaat ggccgagttt caaccatatt ccgtcggtgt gcctgcaact tgactccctc
    21601 ccctgtgggg gagggttggg gagagggtaa aacggggcag atacagacaa tatttccgtt
    21661 accgccccga tgccctctcc ctaaccctct cccacgggag agggaatgga ttgccgttga
    21721 aataaatcgc tctacataaa aaatcaatgt gttatctcaa acccacgtta ggcctaagca
    21781 aatggtcgga catccgtatc cggcaagcaa gctgctttca gacggcattt ccagccaaca
    21841 agcgcgccaa tatcccctca tacaccgcag acagcttcgg aatatcgtcc agccgcacgt
    21901 tttcgttgat ttggtggatg gtggcattgg acgggcctaa ttcgatgagt tcttttgcaa
    21961 tggctttgat gaagcgtccg tccgaagtgc cgccggtggt ggacaattcg gcctcaatgc
    22021 cgcaggtttc ggcaatggct gcgcgtgcca cgtcggtcag tttgcccgct tgggtcagaa
    22081 agggctgccc cgaacacgac cactgcaaat cgtattgcac gccgtgtttg tccaaaatgg
    22141 cgtggacgcg ttgtttcagc cctgcttcgg tggactcggt ggagaagcgg aaattgaatt
    22201 tgacgttcaa ctcgcccgga atgacgttgg tcgcgcctgt gccgccgttg atattggaaa
    22261 tttgaaagct ggttggcggg aaatattcgt tgccttcgtc ccagacttcc tgcgtcagct
    22321 ctaacaaggc cggggcaaaa gtatgcacgg gattgattgc caaatgcgga taggcaatat
    22381 ggccttgctt gcctttgacg gtcaggttgc ccgacagcga gccgcgccgg ccgtttttaa
    22441 tcatatcgcc caatttgtcc acggctgtcg gttcgccgac gatgcagtag tcaatcaact
    22501 cgccgcgcgc tttcaacaca tcgacgactt tggtcgtgcc gtccagcgcg tcgccctctt
    22561 cgtcggaagt aatcaggagc gcgatgctgc cttgatgatc ggggtgttcg gcaacaaagc
    22621 gttcgcaggc ggtaacgaaa caggcgatgc tggttttcat gtccgccgca ccgcgcccgt
    22681 ataatcttcc gtcgcgctcg gccggctcga acgggggcga atcccatttt tcgacagggc
    22741 ctgtcggtac aacgtcggta tgccctgcaa aacagacgac gggagctttc gtgccgcgtc
    22801 gcaaccagat gtttttggtg tcgccgaaat ggagttcttc agccgcaaaa ccgattttgt
    22861 gcaggcgttc ggcaaggagt ttttggcaat tttggtcgtc gggggtaacg gatgggcggg
    22921 aaatcaattc tttggcgagt tctagggatt gggtttcggt catatttgtt cacttttgaa
    22981 attagaccat ctgaaacgtt ctgaatgtga ttttcagacg gcatttaggt taggttggca
    23041 tacggggtgg gtatttttac ccgtcagtct tctgaatcat ttgccgtgac acgcttcgta
    23101 aagcggcagc aaatcttcca ccgtttccgc tatccatttc gcgacatcct gcctgcccaa
    23161 atcgtcgcgt tcgatgtgtt tgccgatgca gaagaaatct tcgtcgtttt gcaaccttcg
    23221 gtcggattca ttttgctgcg cgacagtgcg gtagtcgtcg tattcgcttt ccgcgccgtg
    23281 ccacatatcg aaagaagcgt atttttcagt atcaaaatta tccaaccaac ggttgtaatc
    23341 aggcagcgca atcggcgaca cgtcggcttt gtagcaatgc cagtccaagc tgacactcaa
    23401 acggcggcgg ttgagcagta tcgacaaaat cgcggcggaa tttttatatt gttcgtattt
    23461 gaagtaggca aagaaatggg cgcgaacctg ccagccgttg caccagcgtt cgatgtgcgg
    23521 cggcgcaaac ggcgcaccca attcggcggc aacctgctga atcagctgct gccatatctg
    23581 ccagttttcc ttgtagtcgg ctttgatttg cggaatgctt tcaggctggt attttttaag
    23641 ctgggcaaac tggaaaaacg ggatattgaa caaatcgcaa cttttcgggg tcagcataat
    23701 atatccttga gacgattgtt tcagacggca ttatttgcgc cggcgcgccg ccataatttc
    23761 gccgatttcg gtcagttttt cttttgggat aaaggtgttg cccatatcaa acagcggctc
    23821 ttcaatcgcc aaatgaacat catatcccgc cacaaaacgt ttgaacgctt cctcatcggg
    23881 gacataagcg ttgtctgctt cgagtttggc aaattcggcg gaaacagccg cccagttgtc
    23941 gtgcagcccg atatgttggc gcaaaagctc gtccacgctt tcttgggctt gcggcgcata
    24001 ttgcagcagc agcgggaaga agttttcttc ttcgtcttca tggtgcagcg gcgcggcaac
    24061 gttgaaatac tgggcgattt ggcggatggt ttgcaaaaca atctgattgc agccgttttc
    24121 ggcgatatag tccgacagca tggcgacttg tccgcaaaaa cggcgcactt tgccgtggca
    24181 ggcatacagc atttcaatcg gttcggcaaa ggtaacgctt ttggtttcaa acggattcat
    24241 gttttcgttc tcaacgggca cttttcaagc agtcatttta taataaaaca gcctgcacaa
    24301 agcaggctgt ccgtcttttg agactttaag cggattaatc gaccaaagtc actttgccgt
    24361 tcatcaaagc accgtgacct gggaaggtac aagcgaattt gtattcgccg tcagccagtt
    24421 tggcaggatc caaagtcagg gaagactctt cgccgccgcc gatcagtttg gtgtgggcaa
    24481 caacgcgcgc atcgtcaggt ttgacatagt cggtatcggc agcacctacg ccgtctttaa
    24541 atacgccgtc catgtcttca gctttggcaa tcacaaggtt gtgacccatg ctggctttgg
    24601 gttgcgtacc ggtatgtttc agagtgatgg tgaactcttt acatgctttg ctgacttgga
    24661 tgtctttggt gttgaactgc atattgtcgt tggattcgac agttgccgca cagttgccgg
    24721 cagcaggggc ttcggcagca tctgcaggag cagcttcggc ggcaggtgct tcggaagcgg
    24781 gtgcttcagc agcatgagtt gcctcggcag caggcgcggc aggttcttga gagcaggcag
    24841 ccaaaccgat aacggcagca gaaatcagag ccagatacgt tttcataaca aatctccaat
    24901 cgataaaata atattcggtt ttacggaaat caaagtgcaa ccgccattaa caaaaccttg
    24961 aaaaagattc cgccgcgttg cacaaacaga tgtttcgggg cggcattttg ctacaaattt
    25021 catttgaaat caaagcctgt ctgcaagttt acaatcgttt actttaaaag gggcaatttt
    25081 accccgaacc tatttcttta gtattagacc cattatcctt tacttcttaa tattaacgga
    25141 tgtttacaca aattcccgta tacattttat gcgccatgcc ttctaaccaa gtttgccaat
    25201 gcctccgcca attcgggatg ccgtttttcc aactttaccg ccgccgaacc gaaactctcc
    25261 agcgcagcct tactcaaatg cagggtattg gttttcggcg gtttttccgg tttcggggcc
    25321 agcctgaccg aaacagagcg tatcgaagca tcaagccctg ccaactgcgg caataccgac
    25381 ggtgcaatca ttttcaagcg cgatgccgcc atattgtttg ccgccaaaag gacaagcctg
    25441 ccgtcttcga tacatgccgt ctgaaaatgc gggtgcaggt tggcaggcag cagttttttc
    25501 acggcggcat ccaaccgccg ccactgtccc gcctgtttca aaagtccgga aagcagcgcg
    25561 tcccgcctgc ccaactgttc caaattcata aaacatacac ccaaaaagat tgaaataccg
    25621 caaacgcgcc tttatttcag acggcattag cactttgcac aaacgcttgt gttaaaatcg
    25681 cgttttcgcc cactattata tcaggcgcag gaattattca tgctgacaaa cattgccaag
    25741 aaaatcttcg gcagccgcaa cgaccgcttg ctgaaacaat accgtaaatc cgttgccaga
    25801 atcaacgcgc tcgaagaaca gatgcaagcc ctaagcgatg ctgatctgca agccaaaact
    25861 gccgaattca aacaacgcct cgccgacggt cagactttgg acggcatttt gcccgaagcc
    25921 ttcgccgtct gccgcgaagc gtcccgccgc accctcggta tgcgccactt cgacgtgcag
    25981 cttatcggcg gtatggtgct gcatgacggc aaaatcgccg aaatgcgtac cggcgaaggc
    26041 aaaaccctgg tcgccaccct cgccgtctat ctcaacgcgc tggccggcaa aggcgtacac
    26101 gtcgttaccg tcaacgacta cctcgcctca cgcgatgcgg gcatcatgga accgctctat
    26161 aatttcctcg gccttaccgt gggcgtgatt atttcagata tgcagccgtt cgaccgtcaa
    26221 aacgcctatg ccgccgatat cacctacggc accaataatg aattcggctt cgactacctg
    26281 cgcgacaata tggttaccga ccaatacgac aaagtgcagc gcgaattgaa ttttgccgtt
    26341 gtcgatgaag tggattccat cttgattgac gaagcgcgca ctccgctgat tatctccggc
    26401 caggcagacg acaacatcca gttgtaccaa atcatgaaca ccgtcccgcc ccacctcgtc
    26461 cgccaagaga cagaagaagg cgaaggcgac tactgggtag atgaaaaggc gcaccaggtc
    26521 atcctgagcg aagccggcca cgaacacgcc gagcagattc tgacccaaat gggattgctg
    26581 gcagaaaacg actcgctcta ttctgccgcc aacatcgccc tgatgcacca ccttatggcg
    26641 gcattgcgcg cgcatacgtt attccacaaa gaccaacatt acgttatcca agacggcgaa
    26701 atcgtcatcg ttgacgaatt tacaggccgt ctgatgtccg gccgccgctg gtccgaaggc
    26761 ctgcatcaag ccgtggaagc caaagaaggc gtggaaatca aacgcgaaaa ccaaaccctc
    26821 gcctccatca ccttccaaaa ctatttccgc ctgtacacca agctctccgg catgaccggc
    26881 acagccgata ccgaagcctt cgagttccaa agcatctaca acctcgaaac cgtcatcatc
    26941 ccgaccaacc gccccataca acgcaaagac ttcaacgacc agattttccg ttccgccgaa
    27001 gaaaaattcg aagccgtcgt caaagacatc gaagaatgcc acaaacgtgg gcagcccgtc
    27061 ctcgtcggca caaccagcat cgaaaactcc gaactggtct cccatctttt gcaaaaagcc
    27121 ggtctaccgc acaacgtcct caacgccaaa gaacacgaac gcgaagccct gattgtcgcc
    27181 caagctggca aagtcggcgc gattaccgtt gccaccaata tggcgggacg cggtacggac
    27241 atcgttttag gcggcaacct gaagcaccaa accgatgcca tccgtgccga cgaaaccttg
    27301 agcgacgaag agaaacaggc acaaatcgcc gcactcgaaa acggctggca ggcagaacac
    27361 gataaagtaa tggaagcagg cggcctgcac atcatcggta cggaacgcca cgaaagccgc
    27421 cgtatcgaca accaattgcg cggacgttcc ggccgtcagg gcgaccccgg atccagccgt
    27481 ttctaccttt cgtttgaaga cccgctgctg cgcttattcg cactcgaccg cgccgccgcc
    27541 atcctcaacc gtctcgcccc cgaacgcggc gttgccatcg aacacaacct gctgacgcgc
    27601 caaatcgaag gggcgcaacg caaagtcgaa ggcagaaact tcgatatgcg caaacaggtt
    27661 ttggaatacg acgacgttgc caacgaacag cgcaaagtca tttacagcca gcgcaacgaa
    27721 attctgacca gcaaagacat cagcgacctg atgcaggaaa tccgttctga tgtcgtcagc
    27781 gacctcgtgg atacctatat gccgcccgac agcatggaag aacaatggga catcccgact
    27841 ttggagaacc gtctggctgc cgaattcaga ctgcacgaag acatccaatc ctggctgaag
    27901 gcggacaatg cgattgacgg tcaagacatc aaagaacgcc tgatcgaacg catcgaaaac
    27961 gaatatgccg ccaaaaccga actggtcggc aagcaggcaa tggccgattt cgagcgcaac
    28021 gtgatgttgc aggtcatcga caaccaatgg cgcgaacacc tcgccgctat ggactacctg
    28081 cgacaaggca tacacctgcg cagctatgcc caaaaaaatc cgaagcagga atataaacgt
    28141 gaagccttta ccatgttcca agacctgtgg aacggcatca aattccatat tgcctccctg
    28201 cttacctcgg ttcaaatcga acaaaaccct gtcgcggtgg ttgaagagca acccatcggc
    28261 aacatccagt ccatccattc cgaatcgccc gatatggaag aacttttggg tcagtcgcaa
    28321 accgatctgg ttaccgaagc ctttaatccc gatgggacgg atttcagccc cgaagccttg
    28381 gaagcgcggg gacaaatcgt ccaccgcaac gacccctgcc cctgcggcag cggtttgaaa
    28441 tacaaacaat gccacggcaa actggcttga gcgtttgaac gcaaatgccg tctgaacatc
    28501 cggtttccgg cttcagacgg cattttgcct gaaccgccac atccgaccgc cattccgaaa
    28561 aatcccgatt tcgtaccgtc caaactaaaa acaggcatcc gccccgccga actatgattc
    28621 catccgactt cattgacgaa cttctggcca aaaccgatat tgtcgacatc atcgacgaac
    28681 aggttccgct gaaaaaaggc ggggcgaact atatggcgtg ttgcccgttc cacaaggaaa
    28741 aaacgccgtc gttttcggtc agtccgacca agcagtttta ccactgtttc agttgcgggg
    28801 cgcacggttc ggcgattggt tttgtgatgg aacatcaggg gctgtcgttt ccggaggcag
    28861 tgcagttcct tgccgaccgc gtgggtatga ttgtgcctaa agtgcgcggg cagaacgata
    28921 atcccgaagt ccgtgccgaa cgtaagaaaa agcagcagac gctggaagaa acgacagcgg
    28981 cggcggctga tttttatgcg caacagttga aattcaatcc gacggcgaag gcttatttgg
    29041 acaagcgcgg cttgagcgcg gaagtcatcg cgcattatgg tttgggctac gcgcccgacg
    29101 gctggcagcc tttggcgcaa gtattccaac cgtacccgaa taccgcgttg gtggatacgg
    29161 gtatggtgat tgacaatgag gggcggtatt acgaccgatt ccgtcatcgg attatgttcc
    29221 ccatccgcaa tccgcgcggg caggtcatcg gtttcggcgg cagggtactg gacgactcca
    29281 aacccaaata tctaaactct cccgatacgc ctttgtttga taaggggaaa aacctttacg
    29341 gcttgtatga ggggcgtgcc gctgtcaagg aagcggagcg gattctggtg gtcgaaggct
    29401 atatggacgt ggtcgcgctg gcacagttcg gcgtgggcta cggtgtggcg gccttgggca
    29461 cggcaacaac agctgaacac gtcaaaatcc taatgcgtca ggcggacagt atttatttct
    29521 gtttcgacgg cgacagcgcg gggcgcaaag cggcttggcg cgcgctggaa aacgcgctgc
    29581 cgcagttgaa ggacgacaaa tcgctgcatt ttttgttcct gccggaagaa cacgaccccg
    29641 acagttacat ccgtgcctac ggcaaagcgc aatttgaaga cgcgcttctg aatcaaagca
    29701 agcccttgtc ggagtatttc tgggaacacc tttcagacgg cattcatctc aatacgcagg
    29761 aaggcaaggc ggaattggta aaaaccagtt cgccgctttt ggcgcagatt accgcgccgg
    29821 cattggctta tttgttaaaa caacggctta gcgaactggt cggcatcgac cccgacaacc
    29881 tcgcgcaact gctgggacag gaagcgccga agcggcacgt caaacaaaaa aactacaaac
    29941 tgccgccgat ttccgtcaaa cagcccgtta tgccgacatt ggtgcaacgg caaatccgca
    30001 gcctcttgat aaatccggat tgggctgcat atatagacct gcccgattat ctggcgttgg
    30061 acggcgattt cgcctgcctt gccaacctcg ccgaaaccat taaaaaccat ccttccgtgc
    30121 cggcaaccgc acaggttttg gaacatatgc gcggttcgcc ctacgaagaa acaatcaacc
    30181 gcatcttccg gtcggccctt caatcggaag aaatggaagg cggcggcgaa gaagattgcg
    30241 aaaacttcca aatcggcatc aaaaaactgc tcaatgagtt aaaatacagc caaatcgaaa
    30301 cattaaaaca aaaaagcctg caatccggct taaatgaaag cgagaaaaaa cttttgctgt
    30361 cgctgctgac cgcaaaacaa aattgaccgg cggattccgc catccgtaaa ccgttatgcc
    30421 gtctgaaaag cattcacccc ggctgcaaca acgacacctg cagaacaccc atccccaaaa
    30481 gccttcagac ggcatcagag taccctactc tgccacgcct tcaggtgcgt ccaaacgcaa
    30541 accgtcggca tcttgccaac agaaagcaga caatgtccaa aaaccaaaat cacgaagaat
    30601 accaagacga tgcccgcccc ctgacgattg aggaacaacg cgcgcgcctg cgccaactca
    30661 tcattatggg caaagaacgc ggctacatca cctactccga aatcaatgac gcactgcccg
    30721 acgatatgtc cgatgccgat caaatcgaca acatcgtcag tatgatttcc ggtttgggca
    30781 tccaagttac cgaacacgcc cccgatgcgg aagacatatt gttaagcgac aatgccgccg
    30841 ttaccgacga tgatgccgtc gaagaagccg aggccgccct ttccagcgca gattccgagt
    30901 tcggcaggac gaccgacccc gtccgtatgt atatgcgcga aatggggcag gtcgacctgc
    30961 tgacccgcga agacgaaatc atcatcgcca aaaaaatcga aaacgccctg aaaaatatgg
    31021 ttcaggccat ctccgcctgc ccgggttcca ttgcggaaat cttagaactc atcgaaaaaa
    31081 tccgcaaaga cgaaatccgc gtcgacgaag tcgtagaagc cattatcgac ccgaatgaag
    31141 tattgctcaa cgaattgggc ttggggcact tggaaaccac agcacccgag aaaccttcca
    31201 acgacaattc ggacgaaaac gaagacgacg aagaatcgga agaagatgcg gatgaaatct
    31261 cggcagccaa tctcgccgaa ttgaaacaaa aagtcatcgg ccactttgcc caaatcgaaa
    31321 aagactacaa aaaaatgatt ggccgtttgg aaaaacacca cagccggcac aaagactatc
    31381 tcgcctaccg cgacgcgatt gccaacaaac tgctggaagt ccgtttcgcc acccggcaaa
    31441 tcgacagcct cagcagcagc ctgcgcggaa aagtagaaaa catccgcaaa ctcgaacgcg
    31501 aaatccgcga catctgcctc gaccgcgtcc atatggagcg cgactacttc atccaaaact
    31561 tcctgcccga aatcaccaat ctggaatgga ttgaagaaga aatcgccaaa ggcagggttt
    31621 ggagcgacgc gctcgaccgc ttccgccacg ccatcctcga aaaacaaacc gagttggcgg
    31681 atatggaaaa agaaacccgc atttccatcg aagagttgaa agaaatcaac aaaaatatgg
    31741 tgtcgagcga aaaagaaacc gcagccgcca aacaggaaat gattcaggca aacttgcgcc
    31801 tcgtgatttc catcgccaaa aaatacacca accggggctt acaattcctt gatctgattc
    31861 aggaaggcaa catcggtttg atgaaagcgg tcgataagtt cgaataccgc agaggctata
    31921 aattctccac ctacgcaacc tggtggatcc gccaggcaat tacacgctcg attgccgatc
    31981 aggcgcgtac catccgcatt ccggtacata tgattgaaac catcaacaag atgaaccgca
    32041 tctcgcgcca acaccttcaa gaaaccggcg aagaacccga ttccgccaaa cttgccgaac
    32101 tgatgcagat gcccgaagac aaaatccgca aaatcatgaa aatcgccaaa gagccgattt
    32161 cgatggaaac ccccatcggc gacgacgacg attcgcactt gggcgacttc atcgaagatg
    32221 ccaacaatgt tgcgccggcc gatgcggcaa tgtacaccag cctgcacgaa gtaaccaaag
    32281 aaatcctcga aagcctgacc ccgcgtgagg caaaagtcct gcgtatgcgt ttcggcatcg
    32341 atatgaacac cgaccacacg ctggaagaag tcggcagaca gtttgacgta acgcgcgaac
    32401 gcatccgaca aatcgaggca aaagcactcc gcaagctgcg gcatccgaca agaagcgacc
    32461 gtttgagaag tttcttggac agcgaagaca gcaagctgta aaccaaaaaa ccgcaggttt
    32521 caaatacctg cggttttttc ttacacaata aacaacgctt ccacatatcc cacactccta
    32581 tcccgagacc tttgcaaaat tccccaaaat cccctaaatt cccaccaagc catttagggg
    32641 attttccatg agcaccttct tccaacaaac cgcccaagcc atgattgcca aacacatcga
    32701 ccgtttcccg ctattgaagt tggaccaagt gattgattgg cagccgatcg aacaatacct
    32761 gaaccgtcaa agaatccgtt acgtccgaga ccaccgcggt cgtcccgcct atcccctgtt
    32821 gtccatgttc aaagccgtcc tgctcggaca atggcacagt ctctccgatc ccgaactcga
    32881 acacagcctc atcacccgca tcgatttcaa cctgttttgc cgttttgacg aactgagcat
    32941 ccctgattac agcaccttat gccgctaccg caattggctg gcgcaagacg acaccctgtc
    33001 cgaattgctc aaactgatca accgacaact gaccgaaaaa ggcctaaaag tagagaaagc
    33061 atccgccgcc gtcgttgacg ccaccattat tcagaccgcc ggcagcaaac agcgtcaggc
    33121 catagaagtc gatgaagaag gacaaatcag cggccaaacc acaccgagta aggacaaaga
    33181 tgcccgttgg atctctacaa actcggttac aaacaacata cccgtaccga tgcggaaggc
    33241 tatatcgaga aactgcacat tacccccgcc aatgccaatg agtgcaaaca cctgtcgccg
    33301 ttgttggaag gactgcccga aggtacgacc gtctatgccg ataaaggcta cgacggtgcg
    33361 gaaaaccggc aacatctgga agaacatcag ttgctggacg gcattatgcg caaagcctgc
    33421 cgcaaccgtc cgctgtcgga agcgcaaacc aaacgcaacc ggtatttgtc gaagacccgt
    33481 tatgtggtcg aacaaagctt cggtacgctg caccgtaaat tccgctatgc gcgggcagcc
    33541 tatttcgggc tgattaaagt gagtgcgcaa agccacctga aggcgatgtg tttgaacctg
    33601 ttgaaagcgg ccaacaggtt aagtgcgccc gctgccgcct aaaaggcagc ccggatgcct
    33661 gattatcggg tatccgggca ggattaaggg gatatttggg tagaattagg cggtatttgg
    33721 ggcgaaaata gacgaaaacc tgtgtttggg tttcggctgt cgggagggaa aggaattttg
    33781 caaaggtctc atcctgttat tttcacaaaa acagaaaacc aaaaacagca acctgaaatt
    33841 cgtcattccc acgaaagtgg gaatccagtt ttttgagtt
//
LOCUS       DBBZYD010000009        33478 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.009, whole genome shotgun sequence.
ACCESSION   DBBZYD010000009 DBBZYD010000000
VERSION     DBBZYD010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 33478)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33478)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33478
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.009"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(232..534)
                     /locus_tag="ACJJDL_000357"
     CDS             complement(232..534)
                     /locus_tag="ACJJDL_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HGG7573138.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIAEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
     gene            complement(506..793)
                     /locus_tag="ACJJDL_000358"
     CDS             complement(506..793)
                     /locus_tag="ACJJDL_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HGG7573139.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            873..1478
                     /locus_tag="ACJJDL_000359"
     CDS             873..1478
                     /locus_tag="ACJJDL_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573140.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            1457..1753
                     /locus_tag="ACJJDL_000360"
     CDS             1457..1753
                     /locus_tag="ACJJDL_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HGG7573141.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            1750..1959
                     /locus_tag="ACJJDL_000361"
     CDS             1750..1959
                     /locus_tag="ACJJDL_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573142.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(2129..3211)
                     /locus_tag="ACJJDL_000362"
                     /pseudo
     CDS             complement(2129..3211)
                     /locus_tag="ACJJDL_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743106.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
     gene            complement(3654..4301)
                     /locus_tag="ACJJDL_000363"
     CDS             complement(3654..4301)
                     /locus_tag="ACJJDL_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HGG7573143.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(4298..4666)
                     /locus_tag="ACJJDL_000364"
     CDS             complement(4298..4666)
                     /locus_tag="ACJJDL_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HGG7573144.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(4676..5347)
                     /locus_tag="ACJJDL_000365"
     CDS             complement(4676..5347)
                     /locus_tag="ACJJDL_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HGG7573145.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(5512..6231)
                     /locus_tag="ACJJDL_000366"
     CDS             complement(5512..6231)
                     /locus_tag="ACJJDL_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7573146.1"
                     /translation="MATLSDKTILITGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            complement(6315..7628)
                     /gene="hpnE"
                     /locus_tag="ACJJDL_000367"
     CDS             complement(6315..7628)
                     /gene="hpnE"
                     /locus_tag="ACJJDL_000367"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HGG7573147.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARYADVTLFEAGRQAGG
                     RARALAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKGKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTAQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFASAEACLQSLSDAV"
     gene            complement(7658..7864)
                     /locus_tag="ACJJDL_000368"
                     /pseudo
     CDS             complement(7658..7864)
                     /locus_tag="ACJJDL_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224552.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8026..8898)
                     /gene="hpnD"
                     /locus_tag="ACJJDL_000369"
     CDS             complement(8026..8898)
                     /gene="hpnD"
                     /locus_tag="ACJJDL_000369"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HGG7573148.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCHRVAGVVGCLIARILGFSDGKTLQYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYCE
                     AVSLLPAADKKAQKVGLVMAAVYYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            9069..10931
                     /gene="hscA"
                     /locus_tag="ACJJDL_000370"
     CDS             9069..10931
                     /gene="hscA"
                     /locus_tag="ACJJDL_000370"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HGG7573149.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGGNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMPIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDDTITQMLKDSMSNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLEAEELQQI
                     RQGIADLQGRVKDGKAEDIRAAAAKLGSITDNFAAKRMNRNIQRALTGQSVDNI"
     gene            11007..11654
                     /locus_tag="ACJJDL_000371"
     CDS             11007..11654
                     /locus_tag="ACJJDL_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7573150.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISDVSNFEGRMRHLENNGYANVA
                     GLERILAVKTDNYKEKENLLHEIFSKSRTELFAVDENLVKRLFLSLRGEIVFPKNETA
                     ESEFEKSVHERRQEGNAGSGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSKIRL
                     FKEAYLRKSGTRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAEGRKPR"
     gene            11690..12451
                     /locus_tag="ACJJDL_000372"
     CDS             11690..12451
                     /locus_tag="ACJJDL_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HGG7573151.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESICV
                     PVDDISDWMFVCNGIPYGGFTVQAMRGQMTEEERTEHDAAWGIDFGDPGQILLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNSDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGASPASTTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            12507..12848
                     /gene="fdx"
                     /locus_tag="ACJJDL_000373"
     CDS             12507..12848
                     /gene="fdx"
                     /locus_tag="ACJJDL_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HGG7573152.1"
                     /translation="MPKITVLPHATLCPEGAVIDNAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(13135..13722)
                     /locus_tag="ACJJDL_000374"
     CDS             complement(13135..13722)
                     /locus_tag="ACJJDL_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HGG7573153.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHHQNRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLSGSGGGFT
                     VTAESVSAACPELEGRYLELVRRAAVSFGFTQGWENPAGGQEKTQAVPDAASGHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            13935..14132
                     /gene="iscX"
                     /locus_tag="ACJJDL_000375"
     CDS             13935..14132
                     /gene="iscX"
                     /locus_tag="ACJJDL_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HGG7573154.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(14200..14601)
                     /locus_tag="ACJJDL_000376"
     CDS             complement(14200..14601)
                     /locus_tag="ACJJDL_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG7573155.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            14812..15771
                     /locus_tag="ACJJDL_000377"
     CDS             14812..15771
                     /locus_tag="ACJJDL_000377"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HGG7573156.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDYAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            15839..17149
                     /gene="tilS"
                     /locus_tag="ACJJDL_000378"
     CDS             15839..17149
                     /gene="tilS"
                     /locus_tag="ACJJDL_000378"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HGG7573157.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKICVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHLLN
                     NVRALQEDLALLDEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRHFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNVQGFELHHYAGRLFVFRPEKTDKLRFLKDRQISGNLR
                     EILAGQGFVLKRHPFGLPGHLLEQDGILRTVAASDRLAVGGIHKDVKKILQEKRVLPA
                     LRPFWPVVADKDNRPLALANYGTDFQISVSDGILPVHPDFPVLF"
     gene            17200..17985
                     /locus_tag="ACJJDL_000379"
     CDS             17200..17985
                     /locus_tag="ACJJDL_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HGG7573158.1"
                     /translation="MKHISSANNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEAKMPSEEVRKLTAVLPEDGVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGIGAVVLGKGCADAWSPKVLRAGM
                     GAHFLSEIYPQADLEIWLARYEDRVFATALREEKQAVLYNEDLREPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            17995..18192
                     /locus_tag="ACJJDL_000380"
     CDS             17995..18192
                     /locus_tag="ACJJDL_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573159.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            18454..18806
                     /locus_tag="ACJJDL_000381"
                     /pseudo
     CDS             18454..18806
                     /locus_tag="ACJJDL_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691158.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            18818..19123
                     /locus_tag="ACJJDL_000382"
     CDS             18818..19123
                     /locus_tag="ACJJDL_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573160.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPRENTHKDASNTGAKTH"
     gene            19185..20561
                     /gene="mpl"
                     /locus_tag="ACJJDL_000383"
     CDS             19185..20561
                     /gene="mpl"
                     /locus_tag="ACJJDL_000383"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HGG7573161.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     KAGHVAWSLMGGHNRMNALAVIAAARHAGVDIQTACEALSTFKNVKRRMEIKGTVNGI
                     TVYDDFAHHPTAIETTIEGLRQRVGNARILAVLEPRSNTMKLGTMKSALPESLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNARTGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            20768..21820
                     /gene="bioB"
                     /locus_tag="ACJJDL_000384"
     CDS             20768..21820
                     /gene="bioB"
                     /locus_tag="ACJJDL_000384"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HGG7573162.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(21967..22533)
                     /locus_tag="ACJJDL_000385"
     CDS             complement(21967..22533)
                     /locus_tag="ACJJDL_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HGG7573163.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRSGFVSFAPNLAAVKLNDYAKV
                     RKRITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGPHVTRAVELYRDRFISYSGGNFATYGAINTSGISGIAPIFKIITNKQGKFIS
                     GTIIPITQADDKIPKIDPEKPLSGGLFI"
     gene            complement(22657..22896)
                     /locus_tag="ACJJDL_000386"
     CDS             complement(22657..22896)
                     /locus_tag="ACJJDL_000386"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573164.1"
                     /translation="MGGCTFFRRTAFVKQRAFEVADGNVRVLQGRFDVFQNIGIGQVI
                     DRIIAAEHNVAHADNGNGIGCLFVRRILSVHIAGI"
     gene            22883..23116
                     /locus_tag="ACJJDL_000387"
     CDS             22883..23116
                     /locus_tag="ACJJDL_000387"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HGG7573165.1"
                     /translation="MQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHSNDFGAQGIT
                     ATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(23179..25038)
                     /gene="ilvD"
                     /locus_tag="ACJJDL_000388"
     CDS             complement(23179..25038)
                     /gene="ilvD"
                     /locus_tag="ACJJDL_000388"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HGG7573166.1"
                     /translation="MPDYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPHSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPKNRDRYVSAALRAYGAMATSADKGAVRDIAQIER"
     gene            complement(25210..26979)
                     /gene="cysI"
                     /locus_tag="ACJJDL_000389"
     CDS             complement(25210..26979)
                     /gene="cysI"
                     /locus_tag="ACJJDL_000389"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HGG7573167.1"
                     /translation="MTVQTKTKGLEWQEKPLSNNERLKTESNFLRGTILDDLKDQLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSYYRSIRLTNRQTFQFHGVPKTKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESALHQQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGGGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIDDLDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(27006..28820)
                     /locus_tag="ACJJDL_000390"
     CDS             complement(27006..28820)
                     /locus_tag="ACJJDL_000390"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HGG7573168.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPAAEPFSVTVLSASQTGNAKSVADKAADSLKAAGIQVRLAELKD
                     YKAKNIADERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCQAGKDFDRRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQAMPPADLQTVPESRYCKADPFPAALLANQKITARQSDKDVRHIELDLSGSDLSYQ
                     AGDALGVWFDNNPALVGEILDLLGIDPATEIQAGGKMMPVARALSSHFELTQNTPAFV
                     KGYAAFAHYEELDKIIADNAVLQDFVQNTPIVDVLHRFPASLTAEQFIRLLRPLAPRL
                     YSISSAQAEVGDEVHLTVGVVRFEHEGRARTGGASGFLADCVEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFAADFLYQTEWQ
                     QFAKEGFLHKYDFAWSRDQEEKIYVQHKIREQAAELWQWLQEGAYVYVCGDAAKMAKD
                     VEAALLDVIIQAGHLNRDDAEEYLNTLREEKRYQRDVY"
     gene            complement(28817..30103)
                     /locus_tag="ACJJDL_000391"
     CDS             complement(28817..30103)
                     /locus_tag="ACJJDL_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HGG7573169.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDAHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ETLPGADEVSRTADDFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(30142..31065)
                     /gene="cysD"
                     /locus_tag="ACJJDL_000392"
     CDS             complement(30142..31065)
                     /gene="cysD"
                     /locus_tag="ACJJDL_000392"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HGG7573170.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPAEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(31103..31843)
                     /locus_tag="ACJJDL_000393"
     CDS             complement(31103..31843)
                     /locus_tag="ACJJDL_000393"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HGG7573171.1"
                     /translation="METTLFKPALWQIPHIGSGGETALAEKTETLKQRLHRIVGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRF
                     RPVREDADRYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(31854..33305)
                     /gene="cysG"
                     /locus_tag="ACJJDL_000394"
     CDS             complement(31854..33305)
                     /gene="cysG"
                     /locus_tag="ACJJDL_000394"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HGG7573172.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKGKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGD
                     RTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAA
                     VGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALI
                     AERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLH
                     EKLAWFGENGEGENRVGQAYPALGGLNAGQRAA"
BASE COUNT         7344 a         8813 c         9554 g         7767 t
ORIGIN      
        1 ggctgaaacc gaacggactg gattcccgcc tgcgcgggaa tgacggaaag tggcgttcgg
       61 gattcccgcc ttcgcgggaa tgacggaaag tggcgggaat aacgaaaggc gggaatgacc
      121 gcgcaaaaag ccgctgcccc cttcggacgg caccggcaac aaaaaaccgc acggccgaaa
      181 ccgcgcggga aaggatagtc gggcgcgccc gataagcagc ggccgccccc gttatttcaa
      241 ttgggcgaca tattggcgca aaacctcgtt gatgcgcgtc tgccagccct tgccgccggc
      301 gcggaatttt tcgaccacat cggcggacag gcgtatggta acgagttgtt tcggggtttt
      361 gcctgtgttt cgtttttgca ttacgccctt ttcttccaat tgtttttgat gggaaaaaag
      421 cacctgtgcc aagtcttcgg gcagggcttc ggcaatgggg cgggcaagcg caaaatcttc
      481 ggcggcaagt tcccgcactt cgccgtcagc gtttgttaag gattgacgtt gcatattttt
      541 taacctctct tttattcgct ttgcgaaaac tgatgacacg gatgccgtct tttatcggcg
      601 taaaacagac aatgtgcagg cgttgcgtat cgcctagata agcagcggca acataacgcg
      661 gttcggggta atcaaagcag acatcgggca caataacggc cgttgtccag cgtatttgcc
      721 cgactgattc aaagggcaaa ttccgctctt cgatattgcg ttgatttttt tcggagtcaa
      781 attcaatctt cattgcagct tgcagcgtat tttgtcgtta cattataagc ggcaaaaaac
      841 caaaatgtaa atacaaaaaa ggaaaccccg aaatgaccat ctatttcaaa aacggctttt
      901 acgacgacac cttgggcagc atccccgaag gcgcggttgc cgtccgcgcc gaagaatacg
      961 ccgccctttt ggcaggacag gcgcagggcg ggcagattgc cgcagattcc gacggccgcc
     1021 ccgttttaac cccgccgcgc ccgtccgaat accacgaatg ggacggcaag aaatgggaaa
     1081 tcggcgaagc cgctgccgcc gcccgtttcg ccgaacaaaa aaccgccacg gcattccgcc
     1141 tcgcggcaaa ggcggacgaa ctcaaaaaca gcctcttggc gggctatccc caagtggaaa
     1201 tcgacagctt ttacaggcag gaaaaagaag ccctcgcgcg gcaggcggac aacaacgccc
     1261 cgaccccgat gctggcgcaa atcgccgccg caaggggcgt ggaattggac gttttgattg
     1321 aaaaagttgt cgaaaaatcc gcccgcctgg ccgttgccgc cggcgcgatt atcggaaagc
     1381 ggcagcagct cgaagacaaa ttgaacacca tcgaaaccgc gccaggattg gacgcgctgg
     1441 aaaaggaaat cgaagaatgg acgctaaaca tcggctgaaa aaatacgttt accacctgtt
     1501 ggtagccatc gaccaactgt tcaacgccct aaccggcggc gcggcggacg aaaccctctc
     1561 aagccgcacc tatcgcggcg cgcggctcgc ccaaaagccc aaaacccgct ggaaggtttt
     1621 atacaccctg atcaacggcg tatttttcga ccgccaacac tgccggcagg cgtatatcag
     1681 cgaactgaaa ggcaggcagc acgacgcgcg gttcaaccaa agccgcgccg ccggggaaaa
     1741 ggggacgcga tgaactactt cggcatggta gagtttctgc gcctgatggc aatggtgcgg
     1801 ccgccatttg tcttcttctc cggcacccgc agcgaactgc ctacttatct tgacctcgtg
     1861 gcagaactgc gcctgaccgg atgggagcgt tttgcaggca gccaaacctt gactgtgagc
     1921 agcacatcaa cagcaattca agctacgacg accacctgat ttataagttc tgaccgcaag
     1981 tagcgtacta cttttaaagg cataagataa tccccgttta acagaccatt aaacggggat
     2041 aaatttgtgc aaaagctaat acaatttcct acgcttcggc ggtgcaaaag ctgccgccaa
     2101 ttcgtgcaaa agctgccgcc gccttacatt ccagtgcaat gccgtctgaa acttcgctaa
     2161 tctcgggttg ccgcgcgctg tgttgttctt cggtactcag caaaaagccg tacagacgct
     2221 ccaatcgggc gcggtaggcg gtgaatttgt tgtagaacat ccggaaaaaa gatagcgcgt
     2281 tttgcagtcg cgcaaaggct tggacggtct gctggatgtc gccgattttg atttgtccgg
     2341 caaacaggcg cggcgcttgc aaaataatgg ggaagagttt gatgccgttg gtgaacatat
     2401 cgttaaagcc gcttaagcag acgctttgcc gcgcgatgcg ccaacggttg cggataatgg
     2461 ctttaaagcg gtcggaaagc cggccgtgtt cgtgttgttc gccgttgtaa aacgctacgc
     2521 tttcggcgtg gtcgcgtacg cggatgaggg aataacggta gtcgccgttg agtttttcgt
     2581 tttcatagtt gtaacgaatc aaggggttgc ctatccacat cgcgataaag gtcgccaaaa
     2641 tcacaaaaat aaagacgagc caaacaatgc cgcgcggaat gtcgaagccg aacacggtca
     2701 ggatgccagc caagccccac aaaacaacgg caaattccaa agaggtaacg accgaattga
     2761 ccatgccgcg tacaaattcg atggtcgaag cgatgaaatc ctgcgcgtcc tgttggatac
     2821 gttggtcgat gttgtccggc gcgtggcggc gcatttgcag gcggtagtag tttttgtcgg
     2881 caagccagcg cgtcgtcagc acttcattga gctgctccga ccatttaatc gccaagcctt
     2941 gatcgaggaa gtcgttgacg acattgttaa acgcccgtat cagcaccacg cccgcgttca
     3001 tcgcggcaaa catccaaaac gcggaggcgt tcaaatcctg catcgagtcg taaagtcctt
     3061 tggacataaa ggtactcaac acattcagcc gtacttcggt caacagcagc gtaaccatta
     3121 ccgtaatcag cagcaagact ttgaccgtgc ttttcggtgt caggcaaagc caaagcggtg
     3181 tggaataaag ctcggtttgc catttctgca tgggaaattt cttacggtat caatgccgtc
     3241 tgaaaaagac gggtacagtt gattttttga tgaagtttgg ggaagttttg ccggtcaggg
     3301 tacattgcgt gttaatttat agtggattaa atttaaacca gtacagcgtt gcctcgcctt
     3361 agctcaaaga gaacgattct ctaaggtgct gaagcaccaa gtgagtcggt tccgtactat
     3421 ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg ttaatccact ataccataca
     3481 accacgccgg aattaagttt aaatttgaat aaaaggttcg ggttctgcaa aatacagaac
     3541 ccgaaccttg ttcggatatt gaaaccggcc gcccgatttt gggcggtgcg gcttgcaagt
     3601 atcaagattc gcatatgccg tctgaagctc ggagaggttc agacggcata tgcttatttg
     3661 ggctgctctt cgacgaatct cggacctttc aagatgccgt tgtgagaata gggcgacagc
     3721 aggttgtatg cggcggtttt ggaaacctga taaccgcggt cggtcaggct gttggcaatc
     3781 tgattgacca ctgcgctgac caaagccccc aacaggccgc tgttgctgtt gttgctgcct
     3841 tcgcggatgc tggccgaacc cgaccacaac tcttttccgt tgcgggaatc gaccagccgt
     3901 gctttggcgg atacggtcgt cacgctgtct aaaatttgat atgaagtgcc gtattcggta
     3961 accgtaatgt acaaaaccgc atcattgccg aaaatctgat gcagtttttc cggccggacg
     4021 gcgtgaatat cggcggcatt ggtcaagccg ttttgtttga aggtttcctc cacgactgcg
     4081 gcggggaaga cgtaatagcc ggcttcggaa agcggcgcgg cggtcgaagc cagtacaccc
     4141 catgttccgt tgacatcggg cgattcgttc agcggcggaa ccaccaaaat tgaagccggt
     4201 ttgctttcct tgaatgacgt gtagtcgaaa tcgggcgctt tttgaacttg gcaggcagac
     4261 agcgccaaca cggcggcaag ccctaaaatc aaaggtttca tcgcttgcct cctttacctg
     4321 ttttcatcag gaagtccata aatacgcccg attcgggaaa cagccttttc tcttcttcaa
     4381 actggcggaa cgcgccctct ttgtctcccg aacgggaaag cagcagtccc agatgggcgt
     4441 gcgcacccgg ggcggcattc atttttttgt tgccggcttc cacaaagtat ttttccatct
     4501 tttcggtctg cttgcccaac gaagtgtcgt cgtttttcaa accttcatag acggtatcgg
     4561 gatagccgcc gtaataatac agggattttt gcccgttgcc gccgcaggcg gtcagagcca
     4621 agaccgccgc acacagcgac aaacggctca aggttttcgg attcatcatt tctccttaac
     4681 ggttgggttg ccatgcgccg ttgtcaacag cctgaaccag gctgttgacg gcttcgcgga
     4741 ttgccaagtc taaaactttg ccgttcaaag tcgcatcgta gccggaagtg ccgccgaaac
     4801 cgatgatttc acggttggaa agtgcgtatt cgcccgcgcc ctgtgcggaa tagacgattt
     4861 cggaagtatt gacgttgacg atattcagag ccacttttgc ataggcgatt tgcgatttgc
     4921 cgcgacccaa aatgccgaag agctgatgat cgccgacatc tctgcgtccg aattcggtta
     4981 catcgccggt aacgacataa tctgcgcctt tcaggttatg cgctttgccg gaaatgccgg
     5041 attcctgttt taatgcgttc aaattggtgc ggttcagtac gttgaagcgg ttggtctgtt
     5101 gcaggtgcgt taccagaatg gtttttgcct ggctgcccaa acggtcttcc ccgtcggaga
     5161 aaatgccttt ttggaagctg gagcggttgt cgaatgttcc gacggaaatc ggggtacgaa
     5221 caccgtgata ttgcgtattg taggaggcga ctttctctac ctcgagactg cgtgaggatt
     5281 cggtcgcaca gccggtcagt gaaacggcag cggcggcaag gacaacggcg gtggaaacgg
     5341 ttttcataaa atttacccta aggtcaagtt aaggaaataa cgggttatca ttattgtcct
     5401 tatgtaaatt taagtcaagg tgtttgtctg tgcgggacgg atgcgcgcgg aaggtacgga
     5461 tatttttcaa acggaatcgc ggcgcgggcg ggatgcctgc cttttccgga tttagaggta
     5521 aacgatttcg ccgctccgcc ctttgctttc ggtacttgcc caccagacaa atgcgggcag
     5581 cacgtccccg tagcttttgc gttcgctttt ggcttcgccc ggatgggatt tgatgcgttg
     5641 cggggaattg atggggccgg ggacgaggac gttggcgcgc aggttgccga agcgttccca
     5701 ttcgtcggcg gcgactttgc acaggtagtt caacgcggct ttggacgcgc cgaagccgcc
     5761 ccagtaggct ttgggtgttt cgccgtggct ttcgccgacg aagatgacgg acgcgtcggg
     5821 cgactgcttc agcagcggga acagggcgcg ggtcagcccc ataggtgcga cggtgttgat
     5881 gcggtattgg ttgacccatt cggcgacggt ttggaaatcc agcggcgaga gggcgtaaaa
     5941 atagccggcg cagtggacga tgccgtccag tttgccttgc gtggcttcgg caatggtggc
     6001 ggcgaactga ttgaattctt tttcttccgc actcatcagg tcgaaacgga tggcgaaggg
     6061 ttcggggtgt ccggcttcga caatcgcgtc atagactttt tccagttttt tctgatggcg
     6121 tgccaccaga atcacggttg cgcctgccgc cgcataggct ttggcgacct gttcgcccag
     6181 accttgcgat gcgccggtaa ttaagatggt tttgtcggac agtgtcgcca tactttttcc
     6241 tttttggtgg tcggtcgggg gtattttagc gttttgccgc accttgtaaa gcgtcccgat
     6301 accggccggc gttttcagac ggcatcgctc aggctttgca ggcaggcttc cgccgacgcg
     6361 aaacctgatt gtacggcggc ttcgagcgtg gcggggtagt ctgggtggag gtagtcgccg
     6421 gcggggaaga tgcggtgccg gtgcaaccac gacaaatccg gcggcggggc atcggctgcg
     6481 gttgtggcgc gtttttcggt gatgacgcgc acggcttcgg gttcgcccaa atgcggaagg
     6541 atgcgtttga ggtcggcgtg aactttgtcc gcccacgctc ggtttgtaaa cgcgccgacg
     6601 cggtcggaaa cgctgatgac ggcggacact tcgttttcag gcagtccgag cctgccccgg
     6661 caaagcaacc attgtgccgt gccgtcggca aggccggtca gcggggcggg caggcggacg
     6721 ggttcggcgt agcgcagata gacggtggtg atggcgtgat agcgaaggtt ttgatatgcc
     6781 gtctgaacgt gttcgggcgt gccttcgggc aggagcgcgg cggcgtggta gggcgcggtg
     6841 gcggggacgg cggcatcgaa agcttcgccg ttgacgagca ctttcccgtc cgggaggggg
     6901 ttcagacggc atacgcgcgt ttcgaggcgg atgtccgcgc cgagccgttg aagctccgcc
     6961 aaggcaggtt cggcgacgat tgcgcccaaa tcctgcttgg gtaggagata gtcgctgccg
     7021 gattttttcg tcagcacgcc gtcggacaaa acgttgcaca acacgcgcag gcttgcggtt
     7081 tccaaaggcg tgttgagcgc accccacacc agcggctgcc aaaactgcat cacggcggca
     7141 cgcggcacgt tccgctgttt cagccattgt gcaactgtcg tgtcgggctg tccgaggcgt
     7201 gcggacttct gcaaatcgga catatcggca agcagtttgc ctttgaatgc ggacggtacg
     7261 cgccgggcaa gcagcacgcc gcccaaaata tgcagcggtg cgggcagggg gagggcgcgg
     7321 aactgtaaac cgccgtgcat atgccagtgc agcggtacgc gcaaaaaggc ggcacggggg
     7381 tctgaaccga tggttttcat caggcgcaac acgccccggt atgcgccgag caaaatgtgc
     7441 tgcccgttgt ccaaaaaacc gaaaccgtcg gtatttccgg ccagtgcgcg cgccctgccg
     7501 cccgcctgcc ggccggcttc aaacagggta acgtcggcgt accgcgccaa ggtgacggcg
     7561 gcggacagtc ctgcccagcc tgcgccgatg acggcgattt tcgggcgcgg atgcggcgtg
     7621 ttcatcattt attcctccaa tggttttgca gccgtatcta tttccgtttc tgaaaatgac
     7681 ggtagaaaag gatacaggct aaaaataaag gcagcagaaa gcgcgcatag ggatatcacg
     7741 gatggtctgc atgccagtat ccgtaccgtc cctgtggaac ggtatcatag cggtaattgt
     7801 cggggaaaaa gttgatccaa accgttactg ccggccataa ggctatatcc ctgactgctt
     7861 tcatttgctt ctgctcctgt ttaaattccc ggcaattcga tttcaaagcg cgaacgccaa
     7921 cgggattgcg cggttacgat gcagactttc agacgatggt tgaaaccccg tccggcgggg
     7981 ctgtgggaat cgggtttgcc tgacgggcgg cgggcggtat gcgccttatg cccgttccgg
     8041 cgtgccgggg cgcggtttga atccgaataa ccaggttttc agggcaatgc gttttttgcg
     8101 cggcgaaggg agggcgattt tgtatttgag gacgttttgt gcgccgtccc ggtcgatttc
     8161 gttcaatagc tcgtaataaa ccgccgccat aaccagtccg actttttggg cttttttatc
     8221 ggcagccggc agcagcgata cggcttcgca gtaggtttca cgggcgcgtt tgatttggaa
     8281 cgccatcaat tcggcaaaat tgcccgtcgg gctgcattgc aaaatcacgc ttgcgggtac
     8341 gtcaaaccgc cgcatttcct ccatcggcag gtaaatccgt cccctgcgcg cgtcttcgcc
     8401 gacatcgcgg atgatgttgg tcagttgcag cgcaagtccc atcttgtcgg cgtattgcag
     8461 cgttttgccg tctgaaaacc ccaaaatccg cgcaatcagg cagccgacta cgcctgcgac
     8521 gcggtggcaa tacagtttca attcctcaaa actgccgtaa cgcgcctgaa ccaaatccat
     8581 ctgcatcccg tcgattaagg cttccagttc atatttcggc agcttgaagg tttccttaac
     8641 ttgccgcaag gcctgattga cggggtgttc cggcatcgcg ccgccgaata ccttgtccaa
     8701 atcgccgcgc caccagttca atgtcgcctg tgcaacatcg gggttggaac attcgtcaac
     8761 cacatcgtcc aattcgcggc aaaaagcata taaaaccgtt accgcatccc gtttttcctg
     8821 agtcaggaaa cggaagcccg acaaaaaact ggagcggctt tcttctgctt tttggcggca
     8881 atagtcgagt cctttcacga tttatattcc taatgatggg cgggaaaggc ggattttatc
     8941 ggcatttggc ggtagagggc aatttcggcg gcacgaccta atccttagcg gtttgctcaa
     9001 ctatcggcgc aaattctgtt aaaatgccgc tttccttcct ttacacaccg caccgacagg
     9061 cagaatttat ggctcttttg cagatttcag aaccgggtat gtccgccgcc ccgcaccggc
     9121 accgtttggc ggcaggcatc gatttgggta cgaccaacag cttggtcgcc accgtccgca
     9181 gcggcagtgc cgcctgcctg cccgatgccg aagggcgcgt taccctgcct tccgtcgtcc
     9241 gctatctgga aaacggcggc attgaagtcg gcaaaaccgc cctgtccgcc caaaaaaccg
     9301 acccgctgaa caccgtcagc tccgccaaac gccttatcgg gcggacgctt gccgatctgc
     9361 atcaaaatac gcactacctg ccttaccgtt tcggcggcaa tcaacgcgtt atcgaactgc
     9421 atacgcggca gggggtgaaa acgcctgtcg aagtgtcggc ggaaatcctc aaaaccctta
     9481 aatcgcgcgc cgaagaaacc ttgggcggcg atttggtcgg cgtggtgatt accgtccccg
     9541 cctatttcga cgatgcccaa cgccaggcca ccaaagatgc cgcgcgtctg gcgggtttga
     9601 acgtattgcg cctgctcaac gaacccaccg ccgccgcaat cgcctacggg ctggacaacg
     9661 cctcggaagg cacgtttgtc gtgtacgact tagggggcgg cacattcgac gtatccgtat
     9721 tgcaactgac caaaggactg tttgaagtca aagccaccgg cggcaacagc gcgttgggcg
     9781 gcgacgattt cgaccaccgc ctgttctgcc gcctgctcga acaaaacgga ctctcccaac
     9841 tcaacgaaca agacagccaa ctcctgctct cgctcgtccg cgccgccaaa gaacaattaa
     9901 ccacgcaaac cgaagcgcgc attcaggcga cgctttcaga cggcatgcca atcgacacaa
     9961 gcatcagtcg cgccgagttc cacaacctga cgcagcattt ggtgatgaaa acgctcgaac
    10021 cggtcacaca ggcgttgaaa gatgccggtg tcggtaaaaa cgaagtcaaa ggcgtgatta
    10081 tggtcggcgg ttcgacccgt atgctgcacg tccaacaggc agtcgccacc ttcttcggac
    10141 aaaccccgct gaacaacctc aatcccgacg aagtcgtcgc gctcggcgcc gccatacagg
    10201 caaacgtcct cgcaggcaac aaaaccgacg gcgaatggct gctgctggac gttacacctt
    10261 tgtcgctcgg tttggaaacc tacggcggct tggcggaaaa aatcatcccg cgcaattcca
    10321 ccatccccac cgcgcgcgcg caggacttta ctaccttcaa agacggtcag accgcgatga
    10381 cgatacacgt cgtacaaggc gagcgcgagc tcgtttccga ctgccgcagc cttgccaaat
    10441 tcaccctgcg cggcattccg cctatggcgg cgggtgcggc gcgtatccgc gtaaccttcc
    10501 aaatcgatgc ggacggtctg ctgtccgttt ccgcccaaga acaaagcacc ggcgtacagg
    10561 cgcaaatcga agtcaaacct tcctacggct tggacgacga caccatcacc caaatgctca
    10621 aagacagcat gagcaacgcc gccgaagaca tggcggcacg tgcccgagcc gaagccgtgg
    10681 tcgaagccga aagcctgacc gatgccgtca acgccgccct cgagttggac agcgatttgc
    10741 tggaagccga agaattgcaa cagattcggc aaggcatcgc cgatttgcaa ggccgtgtga
    10801 aagacggaaa agccgaagac atccgtgccg ccgccgccaa actcggcagt attaccgaca
    10861 atttcgccgc caaacgcatg aaccgcaaca tccaacgcgc gttgactggt caaagcgttg
    10921 ataatatttg acggcaaatg gtttcagacg gcatagatat aacctgatac cgtctgaagg
    10981 ctcgaaaaca cttgaaaaac atcgatatgg aaaagtcagg cattgtctat ctgatgaaaa
    11041 ccgtcatcaa gggcgtgtat aaaatcggca tttcggacgt aagcaatttt gaaggcagaa
    11101 tgcgccattt ggaaaacaac ggctatgcga acgttgccgg attggaacgc atcctcgccg
    11161 tcaaaaccga caattacaaa gaaaaagaaa acctgctcca tgaaattttt agtaaaagca
    11221 ggaccgaatt gttcgccgtg gacgagaatc ttgtaaaacg tttgttttta tcgcttcgcg
    11281 gcgaaatcgt gttcccgaaa aacgaaacgg cggaatcgga atttgaaaaa agcgtccacg
    11341 aacgcaggca ggaagggaat gccggatccg gtcgcaaaca actgcttgat ttggtacggc
    11401 gcggacaccg ggaataccct tacgcgctgc cccggctttt ggcgggcgcg gcatcctaca
    11461 agccgaaaaa atcgaaaatc cgccttttta aagaagcata tttacgcaaa agcggtacga
    11521 ggctgaccga cgaaattgca gacggcatcc atatttacac ctgtttttcg cgggcggatt
    11581 tggaaaaagc ctattccgaa tatttggaac ttttcaaatc cgaatcggat gccgaaggca
    11641 gaaaaccacg gtaaggtgca aacagatacc gtacacgttg aggagcagta tgatgggcga
    11701 ttccgtcatt tattatgtag aacaggcaga cgaaccggta aaccgtgccg gcgaacgcgc
    11761 ccgtaaaaca ttcaaatact tttggcgcga gcttttttgg gaacgccgcc gcatcattcc
    11821 cgccttagat tttgccatgg tcaaagcccc ttttttccaa gacggcgaag acggcgaaat
    11881 ttgcgaacat atgtggatcg acgatattta ttttgacggt ctttacattt atggcgtgct
    11941 gaacaatgaa cccggcgaac tgaccaatgt cgaacaaggc gaaagcattt gcgttccggt
    12001 tgacgacatc agcgactgga tgttcgtgtg caacggcatt ccctacggcg gctttaccgt
    12061 acaggcaatg cgcgggcaga tgacggaaga ggagcgcacc gaacacgatg ccgcatgggg
    12121 aatcgatttc ggcgatcccg ggcagatatt gctggtgtat gaagaaaaag aacatcccga
    12181 aaatctggaa gagcatccga tgtgccggaa ctgtattgac gattttcggc aacagttgtc
    12241 ccaaaattcg gattttctgc atgagcagga cgaagacggc tatacgccgc ttcatcatga
    12301 agccatcgca ggaaatgcac ttatggttca agccatgctt gaatatggcg caagtcctgc
    12361 ctcaacgaca tcggaaggct ataccgccct cgattttgcc cgcctggcgg gctggcaaaa
    12421 tgttgccgac ctgctcgaac cgagacatta ggcagacagt tttccgaaaa acggacgcaa
    12481 ccacttttta cagaaagaca ataaaaatgc ccaaaattac cgtacttcca cacgcgacgt
    12541 tatgccccga gggtgcagtc atcgataacg cgccggaagg caaaaccgtc ctcgacgtac
    12601 tgctcgacca cgacatcgaa gtcgatcacg cctgcgaaaa atcctgcgcc tgcaccacct
    12661 gccacgtcat catccgcaaa ggtttcgaca gtttggaaga accgaccgaa ttggaagaag
    12721 acctgctcga ccaagcatgg ggtttggaag ccgattcgcg cctgagttgt caggcggttg
    12781 tcgccggcga ggatttgatt gtggaaatcc ccaaatacac catcaaccac gcgcgcgaag
    12841 aacactgaaa acaggccgtc tgaagccggc acgcttcaga cggcattgtt gcgcggataa
    12901 ggcgcaatcg cccgaaaaca ggcgttcgta caggcggaac tttcgattct atagcgaatt
    12961 aacaaaaatc aggacaaggc ggcgagccgc agacagtaca aatagtacgg caaggcgagg
    13021 caacgctgta ccggtttaaa tttaattcac tatatattga tttttatcgg ttttctgacg
    13081 gaacggattg gtgcggcatc cgaggcggat tactcgggcg cgatgcacgg gtatttatcg
    13141 gttttgcagc cggaaaaacc gccggcgggt tactttcagg gcggcggtcg ggcggtatgc
    13201 cggatagcgt tccactttcg cttctatatt gattttgatt ggttttctga cggaatgacc
    13261 cgatgcggca tccgggacgg cttgtgtttt ttcctgcccg cctgccggat tttcccatcc
    13321 ttgcgtgaaa ccgaaagaga cggcggcgcg gcggacaagc tcgagatagc gtccttcaag
    13381 ctccgggcag gcggcggaca cgctttctgc cgtaaccgtg aagccgccgc ccgacccgga
    13441 aaggcgttcc gcaatctgcg tgtagatacg ccaacgttgg gcgcgcaaca ttgccgcatc
    13501 gcaaccggca gccgctttat ccaaggcaat caggccgcgc cggttttggt ggtgaaggca
    13561 aaccgttact ctggagagga tatgttgccc gtccaatatt tgatacagtt tgcgtatcag
    13621 cagaatcagg cggtcaaact cctccatctc cgacagggaa tcaggatggt cggaagcggt
    13681 ataaaccagt ttggacaatt ttgcggcaaa catattgttc atcaatcttc cttgtcggtt
    13741 gaaaccccgc tcttcggggc ggtagaatca gatttgtttg ggagggacaa ctcctcccag
    13801 atcaggacga cacataggct ggtgcttgat gtgttgtccg gcgagttgaa acattcagcc
    13861 atcctcaagg tgcggcagtt ttgccgaaac atattctaca cggcttcaat gccggacgat
    13921 aaaaggaaat tcatatgaaa tggaccgaca cccggcgtat cgccgaagaa ctctatgacc
    13981 tgcacggcga aaccatcgat cccagaaccg tgcgctttac ccaactgcgc gacctgatta
    14041 tggcattgcc cgaatttgat gacgatcccg cccgttgcgg cgaacgtatt ctcgaagccg
    14101 tgcagcaggc atggatagac gaggcagaat aagtttcggg aatgccgtct gaaatacggc
    14161 ggtacgcggt tcgtgcttct gtttgcagtg ggaacggttt taccagtctc cttttttcag
    14221 cctatccagt tggcggcggt cgcgcttggt cggtctgccg tcgggatggg cggaagtgat
    14281 gcggctgaat tggtcgagct gtttgcgctc ttccctcaat gctgccgttt ttgcgtcttc
    14341 ttcatacaga agccgcgcct cggatgccgg gcggcgttgg tggttcaaac ctttaacctt
    14401 gattttatag ggaagggaat tgagcgtcag gtcgataata tcgccgatgt ctatggtttt
    14461 actgtttttg accttcgagc cgtttacttg aaccctaccc agttcgatgt gcttttgcgc
    14521 aagggaacgg gtcttgaaaa aacgtgccgc ccaaagccat ttgtccagcc gcatggcgga
    14581 agaatcgtgc ttgtctttca tacgattttg tttgaaataa ttgaatttgt ttcgagttta
    14641 gcataagata cgccgcctat aactagtata tatgcactaa tccactgttt tccatgctgt
    14701 ccgaacacaa aaagagggtg tggaaaagcc gttttggaca ataaattaac tgcggaatat
    14761 gcacaaatag cgtatgatag cggcagaatc tgttgatgag agcttcattc tatgaaacct
    14821 gtttttttgg attttgaaca acccatagcc gaactgacca acaaaatcga tgagctgcgt
    14881 ttcgtccaag acgagtctgc cgtcgatatt tcggacgaaa tacaccgttt gcagaaaaaa
    14941 agcaacgacc tgaccaaatc gattttcagc aaactcacac ccgcccaaat ttcacaggtt
    15001 tcccggcatc cgcagcgtcc ctatactttg gattacattg aggcactgtt taccgatttt
    15061 gaagaactgc acggcgaccg ccactttgcc gacgattatg cgattgtcgg cggattggcg
    15121 cgtttcaacg gacaaagcgt gatggtcgtc gggcatcaga aagggcgcga caccaaagaa
    15181 aaaatccgcc gcaacttcgg tatgccccgt cctgaaggct accgcaaagc cctgcgcctg
    15241 atgaagacgg cagaaaaatt cggcttgccc gtcatgacct ttatcgatac gccgggcgcg
    15301 tatcccggca tcggcgcgga agaacgcgga cagtcggaag ccatcggcaa aaacctgtac
    15361 gaactgacgc gcctgcacgt ccccgttttg tgtaccgtca tcggcgaagg gggctcgggc
    15421 ggtgcgttgg cggtcgccgt aggcgattac gtcaatatgc tgcaatattc gacctattct
    15481 gttatctccc ccgaaggctg cgcttcgatt ttgtggaaaa ccgccgaaaa ggcggcggat
    15541 gcggctcagg ctttgggcat tactgctgac cgcctgcaaa agctggactt ggtcgatacc
    15601 gtcatcaaag aaccattggg cggcgcgcat cgggatttcg ggcaaaccat gaaaaacgta
    15661 aaagccgttt tggaaaaaca actgcacgaa gcgcaaagca tcccgcttgc cgatttgctt
    15721 tcgcgccgtt tcgaccgcat tatggcttac ggcaaatttt cggaacaata attcaggtag
    15781 aacaagcagc aagcagtttg tctgaaactg cttgcttttt ctttatcggg acggaaccgt
    15841 gctgacttta gatgcgtttg agcaatgctt gaaggattgt tttcctcaag gtctgaatgg
    15901 aaaaaaaaca gcggtggcat taagcggcgg cttggattcc gtcgttttgc tgcatctgct
    15961 tgtccgcgcc gggaaaaaag gcggttttat tccggatgca ttgcatatcc atcacggctt
    16021 gagtccccgt gccgacgatt gggcggattt ctgccaaaac tattgcgata tgctcggggt
    16081 ggggctggaa acggttaaga tctgcgtgga aaaaaacggt ttgggcatcg aggcggcggc
    16141 gcggcaaaag cgttatgccg cgtttgccga aaaaggcttt gacgttttgg cgttggcgca
    16201 ccacagggac gatcaaatcg aaacctttat gctggcggtc gcgcgcggcg gcggtttgcg
    16261 cgctttggcg gctatgcccg ccgtccgccc ttttggggaa aaaggcatta tctggcggcc
    16321 cttgctgcct ttttcgcgcc aagatatatg ggattatgcc caaaaacacg gtttgccgaa
    16381 tatcgaggac gaaagcaata gcgatacggc ttatttgcga aaccgcttcc ggcaccgtat
    16441 tttgcccgaa ctttcggcgc agattcccca tttcgggcgg catctgttga acaatgtccg
    16501 tgccttgcag gaggatttgg ctttgttgga cgaggtcgtc gttcaagact gccgttgggt
    16561 ttgcggagcc ggttatttcg atacggcgcg gtggctgacg ttttccccgc gccggaaaac
    16621 ccatattttg cggcattttt tgaaggaaaa cggcattccc gtgccgaatc agaatgccct
    16681 tgccgacatt gcccgggttt tgacggaggc aaaaaccgga cgctggaacg tgcaaggctt
    16741 tgaattgcat cattatgcag gcaggctgtt tgtgttccga ccggaaaaaa cggataaact
    16801 gcggtttttg aaagacaggc agataagcgg aaatttaagg gaaatattgg cggggcaggg
    16861 atttgtttta aaacgtcatc cgttcggact tcccgggcat cttttggagc aggacggaat
    16921 cttgcggacg gttgcggcat cggacaggct ggctgtcggc ggtatccata aggatgtgaa
    16981 gaaaatcctt caggaaaagc gggttttgcc cgcgctgcgc ccgttttggc cggtcgtcgc
    17041 cgacaaggac aaccgtccgc tggcgttggc aaattacggt acggattttc aaatctcggt
    17101 ttcagacggc attttgcccg tccatccgga ttttcccgtt ttattttgat ggaatcggaa
    17161 tcgccgttac ctattatata ttcttgaaaa ggcggtaaag tgaagcatat cagttcggca
    17221 aacaatgaac acatcagaca cctgcaccgc ctgttgtctc aagggaagtt cagacggcaa
    17281 tacgcccaaa ccgttttgga gggcgtgcac ctgcttcagg ttttcctgca atccggcggg
    17341 atgccggtcg gggtatatat tcccgaagcg aaaatgccgt ctgaagaagt ccgtaaattg
    17401 acggcggttt tgccggaaga cggggttttt tccgtttcag acggcatatt gaagaaaatc
    17461 agcagcctga cttgcgcgga tgatgtgctt gcgctgattg atattccgga tgcgggtgct
    17521 ttgccggccg gcggcgactg tgtggttttg gacggcgtgc aagatccggg caatgtcggc
    17581 acggtgttgc ggagcgcggc ggcggcagga atcggcgcgg tcgttttggg caaaggttgt
    17641 gcggacgcgt ggtcgcccaa agtgctgcga gccggaatgg gcgcgcattt cttgtcggag
    17701 atttatccgc aggcggattt ggaaatatgg ttggcgcgtt atgaagaccg tgtgtttgcc
    17761 accgcgttgc gtgaggaaaa acaggcggtt ctgtataacg aagatttgcg cgaaccgaca
    17821 gcctgggtgt ttggcaacga aggcgcgggt gtcggcaaag cggttttaga cagggcggac
    17881 aagtgcgtca ggataccgat gcacgatgca accgagtctt taaatgtcgc gatggcggcg
    17941 acaatctgcc tgtttgaaca gatgcggcag cggtcggcgt attgaggaaa agaaatgccg
    18001 tctgaaaaaa tctattacgg cgtattgatt ttcttatgta tcgcttctat gctgctgtcg
    18061 ccgttttttt atgcgggtgc tttgaagccc aagaaggcgg cattgcggaa ggacgggcag
    18121 tggaaactca tcttattgtc caataccgtg gcggcggcgg ttttggcttg ggtgtggtgg
    18181 aaatggtttt gacagatatt gctcaaaatc gtgctaatgg aatccgaaca aataaagaat
    18241 tttgtaaaaa atttgttaaa tcaacgaatt aaagttttgt ggaaaacaaa acagctctaa
    18301 gcaaataggg cgtttgtcgg taaatacgga agagttgcgg cattatcggg catctttaac
    18361 aagtagtgcc gtcttggcag gcaatcggtt tttatgggca gcttgcaaaa tcgcggatat
    18421 aaaattgcga atcggttaaa gtgtggggac gctatgaaaa attgcgaatt ttttatgacc
    18481 cgacaagggc aatctatgat agcggtgcag attatttaac cagagaaaaa catagattcg
    18541 tcgtaattgc aaatagtgct tgggggctat tgcttaattt atcttgttat tatgacaagg
    18601 ttttggaaaa gcggaaaata ccgttcggca aacaggaaat tgatgacgat atggacaaag
    18661 tgtccgccca taagcggaag tttaaagata tttctgaaat caaagtaggg gatggttggg
    18721 aatacccgtt caattatgag cagggaatga aagaattaga tgaagtgcta ttgaaataca
    18781 ttcccttttt tgaagaagaa cgataaagga ggttgatatg cgcgtatcta aaataattgg
    18841 aagtatgttg cttgttacag cggttcagac cgtattttcg gcaaatgttt acgcgtgccg
    18901 ccataatggt aaaaccagtt acagccaaac tccgggaaaa cattgtacca acgcgggttt
    18961 ggggcgggat cgggtgtaca gttcggttag accggcagta aaagacaggg cggaagacgc
    19021 aggggtcggc gattattcgg acacggtgag ggacgaacac gtccaaaatc cgagagagaa
    19081 tacgcataag gatgcttcga ataccggtgc aaagacgcat tgattgaaac cgaatcagcc
    19141 atgacggcgt tgaataatag aatttgaacg attagggaac tctgatgaaa cacatccaca
    19201 ttatcggtat cggcggcacg tttatgggtg ggattgccgc cattgccaaa gaagcagggt
    19261 ttgaagtcag cggttgcgat gcgaagatgt atccgccgat gagcacccag ctcgaagcct
    19321 tgggcatagg cgtacacgaa ggcttcgacg cggcgcagtt ggaggaattt aaagccgacg
    19381 tttacgtcat cggcaatgtc gccaagcgcg ggatggatgt ggttgaggcg attttgaacc
    19441 gcgggctgcc ttatatttcc ggtccgcaat ggctggctga aaacgtgctg caccatcatt
    19501 gggtactcgg tgtggcgggg acgcacggca aaacgaccac cgcgtccatg ctcgcatggg
    19561 tcttggaata tgccggactc gcaccgggct tccttatcgg cggcgtaccg gaaaacttca
    19621 gcgtttccgc ccgcctgccg caaacgccgc gccaagaccc gaacagccaa tcgccgtttt
    19681 tcgtcattga agccgacgaa tacgacaccg cgtttttcga caaacgctcc aaattcgtgc
    19741 attaccgtcc gcgtaccgcc gtgttgaaca atctggaatt cgaccacgcc gacatcttcg
    19801 ccgatttggg cgcgatacag acccagttcc accacctcgt gcgtaccgtg ccgtctgaag
    19861 gcctcatcgt ctgcaacgga cggcagcaaa gcctgcaaga cactttggac aaaggctgct
    19921 ggacgccggt ggaaaaattc ggcacggaac acggctggca ggccggcgaa gccaatgccg
    19981 atggctcgtt cgacgtgttg cttgacggca aaaaagccgg acacgtcgct tggagtttga
    20041 tgggcggaca caaccgcatg aacgcgctcg ccgtcatcgc cgccgcgcgt catgccggag
    20101 tcgacattca gacggcctgc gaagccttga gcacgtttaa aaacgtcaaa cgccgcatgg
    20161 aaatcaaagg cacggtaaac ggcatcactg tttacgacga cttcgcccac catccgaccg
    20221 ccatcgaaac caccatagaa ggtctgcgtc agcgcgtcgg aaacgcccgc atcctcgccg
    20281 tcctcgagcc gcgttccaac acgatgaagc tgggcacgat gaagtccgcc ctgcccgaaa
    20341 gcctcaaaga agccgaccaa gtgttctgct acgccggcgg tgtggactgg aacgtcgccg
    20401 aagccctcgc acctttgggc ggcaggctgc acgtcggcaa ggatttcgat gccttcgttg
    20461 ccgaaattgt gaaaaacgcc cgaaccggcg accatatttt ggtgatgagc aacggcggtt
    20521 tcggcggaat acacaccaaa ctgctggacg ctttgagata gcccgggcga tgccgtctga
    20581 aagcccttca gacggcatcg tccggctgcg cggcacaaag gcggaaaaac cgtttgcccc
    20641 gtattttcaa acgcgttaca cttgccgccg ctgttttcag ccatttgatt acccgcaacc
    20701 gccgtcattg cgccggcggt ttgcctgtca gcgtcattgc gccgctgtaa atacgaaaga
    20761 acacattatg accgtatccc ccgtcgcctt gcgccgtaag accgagtgca agcctcatcc
    20821 caccgcgcgc tattggaaaa aatgcgatgt cgaagccctg ttcggacttc ccttcctcga
    20881 cctcatttac caagccgccg aaatccaccg ccaaaatttc aacccgcgcg aaatccagct
    20941 ttccacgctg ttgtccatca aaaccggcgg ctgtcccgaa gattgcgcct actgtccgca
    21001 atcggcgcac cacaacacca atctgggcaa agaacagatg atggatgtgg atgaaatcgt
    21061 cgaaaaagcc aaaatcgcca aatcgcgcgg cgcaagccgg ttttgcatgg gcgcggcgtg
    21121 gcgcggcccc aaacccaaag acgtggagac ggtttccgca atcatcaaag ccgtcaaggg
    21181 cttgggtatg gaaacctgcg gcacgttcgg tatgctcgaa gaaggtatgg cggaagactt
    21241 gaaagaggcg ggcttggatt attacaacca caacctcgac accgaccccg accgctacaa
    21301 cgacatcatc catacacgcc ggcatgaaga ccgtatggac accttgggca aagtccgcaa
    21361 cgccggtttg aaagtctgct gcggcggcat cgtcgggatg aacgaaaccc gcgccgaacg
    21421 cgcagggctg attgccagcc tcgccaacct cgacccgcag cccgaaagcg tgccgattaa
    21481 ccggttggtc aaagtggaag gtacgccgct tgccgatgcc gaggatttgg actggacgga
    21541 atttgtccgc accatcgccg tggcgcggat tacgatgccg caaagttatg tccgactgtc
    21601 ggcagggcgc agcaatatgc cggaagcgat gcaggcgatg tgctttatgg cgggcgcgaa
    21661 ctcgattttt tacggcgaca agctgctgac cacgggcaat ccggatgaag acggcgacag
    21721 aatcctgatg gaaaagctca acctgtatcc cttacagttt gagctggaag gcgaggtcgc
    21781 cgaagtggaa aaagcctctg ggattaaagt ggattattga cgattgcaaa aatgccgtct
    21841 gaaacccgaa aaaaggcttt cagacgacat ttgttcggac ggtatttcca atatcttttt
    21901 accggcgcgt gatgttgccg tcgggcgaga catccagccc gttctcgttg gggaagtcgc
    21961 tgcggttcag ataaataatc cgcccgataa cggtttttca gggtcgattt tggggatttt
    22021 atcgtcggct tgggtaatag ggatgatagt tccggaaata aatttaccct gtttgttggt
    22081 gataattttg aaaatcggcg caatgccgct gatgccggag gtgttgattg cgccgtaggt
    22141 ggcaaagttg ccgccgctgt aagagatgaa gcggtcgcgg taaagttcga cggcgcgtgt
    22201 aacgtgcggc ccctgcccga atacgacatc cgcgccggaa tcgacggcaa gccgtgcaaa
    22261 ctcgacgacg ttgcccctgt tttccccata gaagatttcg gtatcgaacg gcaggtgttc
    22321 cgcctgtttc ccttccgcgc cgccgtggaa cattacaatg acgatgtcgg ctttctgttt
    22381 ggttttggta atccgttttc taactttggc ataatcgttc agtttgacgg cggcaaggtt
    22441 gggggcgaag gagacgaagc cggatcttac gccgtttttc ttcaggatgg cggtttcaaa
    22501 cctgttttcg atgcccgaat atttgatgtt caattcgtca aggttcgccc tttatgccgt
    22561 ttccgcaccg caaaccgccg gggtcaagcc ctcggcgcat cctgccggaa cggaatcccc
    22621 gtgctgccga ttgacggttc aaaccccgcg cccgtttcaa ataccggcga tgtggacgga
    22681 caggatgcgc ctgacgaaaa gacagccgat accgtttcca ttatcggcgt gggcgacatt
    22741 atgctcggca gcaattatcc ggtcgattac ctgcccgata ccaatattct gaaaaacgtc
    22801 gaatctgcct tgcaagacgc ggacattacc gtcggcaacc tcgaaggcac gctgtttgac
    22861 gaaggcggta cgccgaaaaa atgtgcaacc ccccaaaata tgctatgcat tccgaacgcc
    22921 ctccgcatac gggcaatacc ttgccgacgc gggattcgac tacctcagct tcgccaacaa
    22981 ccacagcaac gacttcggcg cgcaaggcat cacggcaacg gcggcgagcg gcagctcttt
    23041 tacatactcg atcgcgctaa agccgctgcc gataacgagg ccaaaattgc ggaaaatacc
    23101 gccatcgccc agataaattt gtccatcatc agacctttac tgttcagacg agacagcatt
    23161 tgccgcacgt tttggggctt atctttcgat ttgcgctatg tcgcgcaccg cgcctttgtc
    23221 ggcggaagtc gccatcgcgc cgtaagctct taatgcggcg gagacgtagc ggtcgcggtt
    23281 tttaggcttc catgctttgc tgccgcgcgc ttccatttcg gcacggcgtg cggcaagctc
    23341 ttcatcggaa atggcaaggt ggatgctgcg gttggggatg tcgatttcga cggtatcgcc
    23401 ttcgtgtacc aaaccgatcg cgccaccttc cgccgcttcg ggcgaggcgt gtccgatgga
    23461 caaacctgat gtgccgccgg agaagcgtcc gtcggttaag agagcgcagg ctttgccgag
    23521 gcctttagat ttcaggtagg aagtcggata cagcatttcc tgcatgcccg ggccgccttt
    23581 cgggccttcg tagcggatga tgacgatgtc gccggcgacg atttggttgc ccaaaatgcc
    23641 ttctactgcg tcttcttggc tttcaaacac gcgggcgcgg ccggtgaatt tgaggatgct
    23701 ctcgtccacg cctgcggttt ttaccacgca gccgcgctcg gcgatgttgc cgaacaagac
    23761 cgccaaaccg ccgtcttgcg agtaggcgtg tgccacgtcg cggatacagc ctttttcgcg
    23821 gtcgaggtcg agggttttcc acatacggtt ttgcgagaac gcttgggtgg tgcgtacgcc
    23881 gccgggcgcg gctttgaagc gttcgatggc gcgggtgttt tcagggttgg ttacgtccca
    23941 tttttcaatc gcgtctttca gcgtcggtgc gtggatagtg tgcacgtcgg tgtgcagctt
    24001 gcccgctttg tccaattctt tcaggatggc gaaaatgccg ccggcgcggt gcacgtcttc
    24061 catatagtag tcgtggttgt tgggtgcggt tttgcagatg cagggcacaa cgcggcttaa
    24121 gcggtcaatg tcggccattt tgaaatcgac accggcttcg ttggcaacgg ccaacaggtg
    24181 caaaatggta ttggtgctgc cgcccatcgc aatatccatc gtcatagcgt tttcaaacgc
    24241 ttttttggtg gcaatgctgt gcggcagcac ggtttcgtcg ttttgttcgt aataacgttt
    24301 ggtgatttcg acaatcatac gtcctgcttc gaggaacaat tctttacggc ctgcgtgggt
    24361 cgccaaatac gaaccgttgc cgggtaggga cagaccgagt gcttcggtca ggcagttcat
    24421 cgaatttgcc gtaaacatac ccgaacacga accgcaggtc gggcaggcgt tttgttcgac
    24481 ttcctcgact tgccggttgc tgacattgtc gtccgccgat tcgatcatcg cgtcaatcaa
    24541 gtccaaacgg cgttcgggtt ggatgtttgc cacgccgata actttgcccg cttccatcgg
    24601 gccaccggaa acgaagatgg tcgggatatt caggcgcatg gcggcaatca gcattcccgg
    24661 ggtgattttg tcgcagttgg aaatgcacac cagcgcgtcg gcgcagtggg cgttgaccat
    24721 gtattcgatg gagtcggcaa tcaaatcgcg gctgggcagg gaatacagca tgccgctgtg
    24781 tcccatagcg atgccgtcgt cgatggcgat ggtgttgaat tctttggcga tggcgccggc
    24841 tttttcgatt tcgcgggcaa ccagctggcc catattgtgc aggtggacat gacctggcac
    24901 gaattgggtg aacgagttgg caacggcgat aatcggtttg ccgaagtcgg tttccatcac
    24961 gccggtggcg cgccacaatg cgcgcgcgcc cgccatattg cgaccgtggg tggaggtttt
    25021 ggagcggtag tccggcatag tgtgtttcct tgtctgctat gccgtctgaa cggcaaaagg
    25081 ctttcagacg gcatttttgt tgtgttttga aatgaaaaaa aaggtatttt ataccaagta
    25141 tcggaatttt gcgggattga aacggcgtgc ggcaaaaaag aaaatccccg caggaatgcg
    25201 gggacgggtt caggcgcggg caatcgcgac ggctttggat gcgtcccaaa aatcaacggg
    25261 ggcatttaat acgggtttga cgatgcccgt ccgtatggcg aaatcgccga aaccttcgcc
    25321 gatattgcgt tctgccgccc atttgccgat caggtcgtcc aattcggcaa ggatttcggg
    25381 cagggtgatg ttttctttgt aaaggcgggg gatgcgtacg ccttcacggt cgccgccgat
    25441 atggaggttg tagcgtccga cggctttgcc gaccagcccg atttccgcca acattgcccg
    25501 tccgcagccg ttggggcagc cggtaatgcg ggtaacgata tagtcgtccg acgtgccgtg
    25561 tttcgccata atcttatcca gatcgtcgat gaagtctggc agcacgcgtt cggcttccgc
    25621 cattgccaag gggcaggtcg gaaaggaaac gcaggacatc gcattttcgc gcagcttgct
    25681 gacatcgttg cggattaatc cgtatgttcg ggcaagttct tcgatttttg ctttgtctgc
    25741 ttcggcaaca tttgccacga tgaggttttg gtttgcggta atgcggaaat cgcctttgtg
    25801 gattttggcg atttccaaca cgccggtcag aagctgtttc ccgccttcgt caaccaaacg
    25861 cccgctttcg atgaaaaggg tcaaatgcca gttgccgtct atgcctttca cccagccgat
    25921 gcggtcgccg cgcccggtaa atttgaacgg gcgtatgggt tcgaacggca tacccatacg
    25981 gcgttcgact tccgcgcgga agttgtccaa gcccatattt tgaatggtgt agcgggtgcg
    26041 ggcgtttttg cggtcgctgc ggttgccgaa gtcgcgctgt gtggttacca ccgcttcggc
    26101 ggccttcagc gcgtgttccg gaggtacgaa acccagttcc agtgaaatgt tcggataggt
    26161 tttggtgttg ccgtgttcca ttgaaagccc accgcctgcc aaaacattaa aaccggcaag
    26221 ctgtccgccg ccgtctgaaa tggcgacaaa atccaagtcg ttgccgtagc agtccacatc
    26281 atttaagggc gggatgacga ctgcggtttt gaatttgcgc ggcagatagg ttttgcccaa
    26341 aatcggctcg tcttcttgaa ggaagtcgtc ggaactttga acttttttgc cgtccaccca
    26401 aacatccaga taaccgcgcg tgcgcggcag caagtgttcg gaaatctttt tcgcgtattc
    26461 gtaagcctgt tggtggagtg ccgactcgat gggattggag gtgcaaagca cgttgcggtt
    26521 catatccgcc gccgtggcga tggaatccaa acccagtttg tgcaagaggc ggtgcatcgt
    26581 ctgcaacttg gttttcggca cgccgtgaaa ttggaaggtt tgccggttgg tcagcctgat
    26641 ggatcggtaa taactgtttt cgcgggcgaa tttgtccaat tctatccatt gggacggctt
    26701 gatgatccca cccggcagcc ggcagcgcaa aagcataaat ttcaagggtt cgagttttgc
    26761 ctcggcgcgt tcggcgcgga tatcgcggtc atcctgctca tacatgccgt ggaagcggat
    26821 gagttggaaa ttgtcgccct tgaagccgcc cgtgagctgg tctttcaaat cgtccaaaat
    26881 cgtgccgcgt aaaaaattgc tttcggtttt caggcgttcg ttgttggata gcggtttttc
    26941 ttgccactcc aaaccttttg tcttggtctg tacggtcatt ttgtgttcct tccgatttca
    27001 tttaatcaat aaacatcacg ctgatagcgt ttttcttcac gcagcgtatt taaatattct
    27061 tctgcgtcgt cccggtttaa atgtcctgct tgaataatca catccaataa ggcggcttcg
    27121 acatcttttg ccatttttgc cgcatcgccg cacacataaa catatgcgcc ctcctgcaac
    27181 cattgccaaa gctctgccgc ctgttcgcgg attttgtgct gcacatagat tttttcttcc
    27241 tgatcgcggg accaggcgaa atcgtattta tgcaggaaac cctctttggc aaactgctgc
    27301 cattcggtct gatagaggaa gtcggcggca aaatgcggat tgccgaaaat cagccagttt
    27361 ttgccttccg cattttctgc ggcacgttgt tggacgaaag cgcggaacgg tgcgacgccg
    27421 gtgcccgagc cgatcatcac aatcggcttg cggctgtctt cgggcagtct gaagccgtcg
    27481 ttgcgctcca caaatacacg caccgtgccg tcttcttcga cgcaatcggc aagaaaaccg
    27541 gatgcgccgc ccgttctggc gcggccttcg tgttcaaaac gaaccacgcc gacagttaaa
    27601 tgcacttcat cgcccacttc cgcctgtgct gaagaaatcg aatacaaacg gggtgcaagc
    27661 ggacgcagta aacggatgaa ttgttctgcc gtcaggcttg ccgggaagcg gtgcagcaca
    27721 tcgacaatag gcgtgttttg cacgaaatcc tgcaaaacgg cgttatcggc aatgatttta
    27781 tcgagttctt cataatgggc gaacgcggca tagcctttga cgaaagccgg agtgttttgc
    27841 gtgagttcga aatgagatga aagtgcgcgc gcaaccggca tcatctttcc gcctgcctgt
    27901 atttccgttg ccggatcgat gccgagcagg tctaggattt ccccgaccag tgccggattg
    27961 ttgtcaaacc aaacgccgag cgcgtcgcct gcctgatagc ttaaatccga accgctcaaa
    28021 tcaagttcga tgtggcgcac gtctttatcg gattggcggg cggtgatttt ctgattggcc
    28081 agcagggcgg cgggaaaggg gtctgccttg cagtacctgc tctccggtac cgtctgaagg
    28141 tcggcggggg gcattgcctg tggcgcgggt gttgcccggt tttttgcggc ttcttctttt
    28201 aagagtgcgg cgatattgtc tgtccaggcg tttgcagagg cggtaaagtc caaatccgca
    28261 tcaacgcgtt cgagcaggcg tttcgccccc aattcttcaa aacgccggtc gaaatcttta
    28321 cctgcctgac agaaattcgg ataggagctg tcgcccaagc ccagtacggc aaattggagt
    28381 ttgtccaatt tcggggcttt tttgccgttc agcagtttgt gcagcacgac ggcttcttcc
    28441 ggcggttcgc cttcgccctg ggtggacgta accagcagca ggcggcgttc gtctgcgatg
    28501 tttttcgcct tgtagtcttt cagttcggcg agcctgactt gtatgccggc ggctttcagg
    28561 ctgtccgccg ctttgtcggc aacggatttc gcattgccgg tttgcgaggc ggaaaggacg
    28621 gtaacggaaa agggttctgc cgccggcaat gctgtctgaa gcgcgggcag ccctgcggat
    28681 gccccgtttc ctgcttttgc ccaagcatag ccggacagcc acgcccattg tgccgcgtcc
    28741 agccccgaca ggagctgcgt gatttcgggc ggcagaggcg gtaatggcgg atttgtgttc
    28801 tgcatatcgt gttcactcat aaaatcatac ctgccgcaac agtgccgtat gtcgcttcgt
    28861 ctatcaggat aaacgaaccg gcggcggtgt tttccgcata aggcgttgcc gtaacgggtt
    28921 tttgaaggtt gatgcggact ttggcgatgt cgttcatctt caaggattcc gcgccggcct
    28981 cttgttccag cgtgcggaca tccaaaacgc tttcaatttc cccgactttt gccggcacgg
    29041 tttgcgtgcc gtgcttgagc aggtatttgc gcgcggtgtt gagcggacgt tcgtcaaacc
    29101 agcaaagcgt ggcttccaga tgtttttgcg gggcgagcgg ggaattttta tcgacaaaaa
    29161 ggtcgccgcg cgaaacatcg atgtcgcggt ccagccggag ggttgccgcc tcgccggcaa
    29221 aagcctgcgc cacttcccct ttcggcgtga tgatttcgga cacttcggcg gtcagcccgt
    29281 tcggttcgat gcggacggtt tgcccgacgg cgaccgaacc gcgttcgatg cgcccctgat
    29341 agcctcggaa atcatcggcc ttgtcggcat cttggcggac gaccagttgc acggggaaat
    29401 aaaaatcgtc ggcggtgcgg ctgacttcgt ccgcccccgg cagggtttcc aaaatggaca
    29461 ataagggttc gcctttatac caaggcatat tgccgccggg gtaaacaatg ttgtcgccca
    29521 agagtgcgga caccggtacg aaatgcgcgt ctttcaaacc gagctgttcg gcaagtcggc
    29581 ggtatgcctc cacaatggcg ttgaatttgt cttcgctgta atccagcagg tccattttgt
    29641 tgaccgccac cacaatatgc gggcagttga gttggcggag gatggcggaa tggcgtttgg
    29701 tctgcggcag aagctgcaag ggctgcgcgc cgaaatccag ttgggatgcg tcaaccagca
    29761 cgactgccgc cgaagcggtg cttgcgcccg taaccatatt gcgcgtgtat tgttcgtgcc
    29821 ccggcgtgtc ggcgatgatg aatttccgtt tcgccgtgga aaaatagcgg tatgccacat
    29881 cgatcgtaat gccctgttcg cgttcggctt ccagtccgtc ggtcaggatg gagaagtcta
    29941 tggtttcttt caaacctttg cttttgccgg attccaaggt tttgatttgg tcggacagca
    30001 gggctttgct gtcgtagagc agtcgtccga ttagggtgct tttgccgtca tcgacgctgc
    30061 cggcggtaat gaagcggagc ggggtttggt gttgtgccgt catattttct tcctcatatc
    30121 tgcttaaagg gtttttgaaa tttagaaata gccttctttt ttgcgttttt ccattgccgc
    30181 ctcgcttgcc tgatcgtcca gccgggtcgc gctgcgttcg gaaatgtcgg caaccgctgt
    30241 ttctctgata atctccgccg gcgtggacgc ggtgctttct accgggcagg tgcagctgat
    30301 gtcgccgacg gtgcggaagc ggacatcaag gatttcggag gtttcagacg gcattttcgg
    30361 ggtgagcggc gttacaggga ccagcagccc cctgcgtctg accacttcgc gcctgtggct
    30421 gtaataaatc ggcggcagct cgaggttttc gcgggcgatg tattgccaga tgtcgagttc
    30481 cgtccagttg gaaatcggga agacgcgcat attttcgcct ttgtgcagcc tggtgttgta
    30541 cagcgaccac agctcggggc gttgcgcctt cggatcccat tgtccgaact cgtcgcggaa
    30601 cgagaaaatc cgttctttgg cgcgggcttt ttcttcgtcg cgccgcgcgc cgcccataag
    30661 cgcgtcgaag ccgtttgcct cgatggtttc caacaaggta accgcctgtg ccgcattgcg
    30721 cgaatcggtt tctttgcgta agaccaccgt gcctttggca atggagtctt ccacgcgccc
    30781 cactatcagg cgggcattga gttttgccgc ctgcgcgtcg cggaaagcaa tcacttcggg
    30841 gtagttgtgt cccgtgtcga tatgcaccag cgggaagggc agttttaccg gccggctgcc
    30901 cagccggaag gctttgcagg cgagggcgag caggaccacg gaatctttgc cgccggaaaa
    30961 gagcagggcg gggttttcgc attccgccgc cacttcgcgg ataatgtgga tggattcgga
    31021 ttccaaccag tcgagttggg cgttgttcgg ttcggttttc gtcataccat attccttatt
    31081 tcttctgtct gatatttatg aattatttgt gcagcccgca ttctttgctg tttctgcctt
    31141 cccaccacca ccgcccggcg cggatgtctt cgcccgcctt gacggggcgg gtgcaggggt
    31201 cgcagcctat gctgggaaat ccttgccggt acaaatcgtt gtaaggcaca ttgttggcga
    31261 ggatgtatgc ccacacgtcg tgttccgacc agtcgaaaat cgggttgtat ttgccgatgc
    31321 cccgtccggc atcgtattcg gcaaacggca gttccgtgcg tgtggcggat tgttcgcggc
    31381 gttgcccggt aagccaggcg tccgcgcctg caatggcgcg gttgagcggt tcgatttttc
    31441 ggatgcggca gcattcgcgg cgcgcttcaa cgctgtcgta aaaggcaaac ctgcctttgc
    31501 tttccacata acggtcggca tcttctcgaa ccggccggaa acgctttatc cgcaaatggg
    31561 gatatgcgcg tccgagcctg tccagcaggt tcagggtttc cgtgtggagc agccccgtat
    31621 ccaaggtaaa aatgccgata ttgaggtttt cgccggcgat aaggtcggta atcaccatat
    31681 cttctgccgc aaggctgctg gcaaaccgtg catcccggtg gctgccgaca atccggtgca
    31741 ggcgttgttt gagggtttcc gttttttccg caagggcggt ttcgccgccg gatccgatat
    31801 gcggtatctg ccacagggcg ggtttgaaca gtgtcgtttc catttttccc gccttatgcc
    31861 gcccgttgtc cggcattcag tccgcccaat gcgggatacg cctgcccgac ccggttttct
    31921 ccttcgccgt tttcaccgaa ccaggcgagt ttttcgtgca gccccaccac ttcgcctatg
    31981 acaatcaatg ccggattcgg cgcggtttcg gcgagttcgg caaggttggc gagcgtgccg
    32041 gttgcggttt tttgagccgg cagcgtgcct tggctgatga cggctgctgg cgtgtcgggc
    32101 gagcgtccgt gctgttgcag ccgttcggca atcagggcgg ctttgagcgc acccatataa
    32161 atcaccaagg tctggcggct gcgggcgagg gtctgccatt cgatgtcggg cgcatccgcc
    32221 ttgcggtggc cggttacgaa aaccgcactt tgggcataat cgcggtgcgt gagcgggatg
    32281 ccggcatagg cggtcgcgcc gacggcggcg gtaatgccgg ggacgaccga aaacgggatc
    32341 tgatggcgtg ccaaggtttc caattcttcg ccgccgcgtc cgaacacgaa agggtctccg
    32401 cctttcaaac gcaccacgcg cctgccttcg cgggccagcc tgaccataag cgcattggtg
    32461 tcctcttgcg gggtgcggtc gccccgggcg cgcttgccga caaaaatccg ttccgcatcg
    32521 cggcggacga gggacagtat gccgtctgaa accagcgcgt cgtaaagcac cacgtctgcc
    32581 tgctggattt cctgcagccc tttgagcgtc agcagccccg catcgccggg acccgcgccg
    32641 accagcgaga cggagccgcc ttgatcattt tgacgacttt gttccaattg gcctgccaat
    32701 tcccgttcgg caagggtgtt ttgccggttt ttgacgaggg cggcgaaacg tccgttaaac
    32761 tgcttttccc aaaagcggcg gcgttcggta acggatttca gtttgccctt gacggcatcg
    32821 cgccaccttc ctgaaatttc cgccatatcg cccaaagacg gcggcagcag ggcttccagc
    32881 ctttcacgca gcagtcgggc gaggacgggc gcgctgccgg agctggaaac ggcaatctga
    32941 accgggttgc ggtcgataac cgacgggaag atgaagctgc aatggtcgcg gtcgtccacc
    33001 acgttgaccg gcttttggca gctttcggca agatggaaaa cgcgccggtt gagggcttgg
    33061 tcgctgcttg ccgcaatgat gaggaaaacc gtgcggatgt gttcggcacg aaattcttcg
    33121 gcaagccaca ggattttgtt ttccgccgcc aacgcggaga gttcggcatt caggtgtttt
    33181 gcggcaaccc tgacctctgc gcccgccttc agcagcaggc tgattttgcg tgcggcgacc
    33241 gcgccgccgc ctacgaccaa tacggggcgg ccggcgaggt tggcgaaaat agggaaataa
    33301 ttcactggct gactcctttg ctgtttgccc gcaccttgtt tccgatacgg tgcgtcgcgg
    33361 catttttgtc ggaatgcggg tcattttaga caaaaggatt ttcccggtta aataataaaa
    33421 aggcatttgt tagaagctga aagctatatg agggcggctg cggatacggc ggttttcc
//
LOCUS       DBBZYD010000010        29532 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.010, whole genome shotgun sequence.
ACCESSION   DBBZYD010000010 DBBZYD010000000
VERSION     DBBZYD010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29532
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.010"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..326
                     /locus_tag="ACJJDL_000395"
     CDS             <1..326
                     /locus_tag="ACJJDL_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HGG7573173.1"
                     /translation="ATTVPAQQTFLDAAELMQWSIETEWLGLNVIAHCNFGKQHAQVE
                     FEACFQDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGKY
                     LKPVA"
     gene            complement(545..1339)
                     /locus_tag="ACJJDL_000396"
     CDS             complement(545..1339)
                     /locus_tag="ACJJDL_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG7573174.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVEWIRENQ"
     gene            1548..2273
                     /locus_tag="ACJJDL_000397"
     CDS             1548..2273
                     /locus_tag="ACJJDL_000397"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HGG7573175.1"
                     /translation="MPRFHLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAARLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
     gene            complement(3464..4306)
                     /locus_tag="ACJJDL_000398"
     CDS             complement(3464..4306)
                     /locus_tag="ACJJDL_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HGG7573176.1"
                     /translation="MRNYVISLASAKERRAHIADTFGRHDIPFQFFDALMPSEELNRV
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVSPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
     gene            complement(4511..5338)
                     /locus_tag="ACJJDL_000399"
     CDS             complement(4511..5338)
                     /locus_tag="ACJJDL_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HGG7573177.1"
                     /translation="MQNHVISLASAKERRAHIADTFGARGIPFQFFDALMPSEELEQA
                     MAELVPGLSAHPYLSSVEKACFMSHVVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLQERFDPDSAFIVRLETMFMHVLTSPSGVADYGGRAFPLLESEHWGTAGYIISR
                     KAMRFFLQHFVMLQPEQIKPIDLMMFSDFFDKEGVLVYQVSPALCAQELHYTKFHNKS
                     SALGSLLEDERSKIPKQKHKDRTLKERLIHALTKISREKKKWEERKKMSEAVIIPFR"
     gene            complement(5342..6427)
                     /locus_tag="ACJJDL_000400"
     CDS             complement(5342..6427)
                     /locus_tag="ACJJDL_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7573178.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLDILIVDDGSTDGTLAIARRFQEQDGRIRILAQPRNSGLIPSLNIGLDELAKSG
                     MGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHG
                     KIWKKPTRHEDIADFFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSK
                     LGRLAYYPEALVKYRLHANQVSSKYSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLE
                     YRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTLPAGAWLDFAADGKMRRLFTM
                     RQYFSILRRLIKNRWQARPDPADKKTG"
     gene            complement(6444..8507)
                     /gene="glyS"
                     /locus_tag="ACJJDL_000401"
     CDS             complement(6444..8507)
                     /gene="glyS"
                     /locus_tag="ACJJDL_000401"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HGG7573179.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSGNQTLGHRFLSDGEITIENADSYAAQMREQGKVEA
                     SFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLVNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            complement(8528..8938)
                     /locus_tag="ACJJDL_000402"
     CDS             complement(8528..8938)
                     /locus_tag="ACJJDL_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding protein YggL"
                     /protein_id="HGG7573180.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFDRFMDELIAYLEVNDFGMAGGGDCGDFSCLFQKSGARSLGETEKKAIISWLA
                     GREDVATLHTTPLVDGFYGDDGWENYSETYKQAD"
     gene            complement(9015..9920)
                     /gene="glyQ"
                     /locus_tag="ACJJDL_000403"
     CDS             complement(9015..9920)
                     /gene="glyQ"
                     /locus_tag="ACJJDL_000403"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HGG7573181.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTPDGNTVSYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            complement(10325..10747)
                     /locus_tag="ACJJDL_000404"
     CDS             complement(10325..10747)
                     /locus_tag="ACJJDL_000404"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HGG7573182.1"
                     /translation="MSIMQVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            complement(10758..12155)
                     /gene="atpD"
                     /locus_tag="ACJJDL_000405"
     CDS             complement(10758..12155)
                     /gene="atpD"
                     /locus_tag="ACJJDL_000405"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HGG7573183.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            complement(12193..13068)
                     /gene="atpG"
                     /locus_tag="ACJJDL_000406"
     CDS             complement(12193..13068)
                     /gene="atpG"
                     /locus_tag="ACJJDL_000406"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HGG7573184.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            complement(13093..14640)
                     /gene="atpA"
                     /locus_tag="ACJJDL_000407"
     CDS             complement(13093..14640)
                     /gene="atpA"
                     /locus_tag="ACJJDL_000407"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HGG7573185.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTAFPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            complement(14651..15184)
                     /locus_tag="ACJJDL_000408"
     CDS             complement(14651..15184)
                     /locus_tag="ACJJDL_000408"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HGG7573186.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            complement(15189..15659)
                     /locus_tag="ACJJDL_000409"
     CDS             complement(15189..15659)
                     /locus_tag="ACJJDL_000409"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HGG7573187.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            complement(15730..15966)
                     /gene="atpE"
                     /locus_tag="ACJJDL_000410"
     CDS             complement(15730..15966)
                     /gene="atpE"
                     /locus_tag="ACJJDL_000410"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HGG7573188.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            complement(16023..16889)
                     /gene="atpB"
                     /locus_tag="ACJJDL_000411"
     CDS             complement(16023..16889)
                     /gene="atpB"
                     /locus_tag="ACJJDL_000411"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HGG7573189.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            complement(16879..17232)
                     /locus_tag="ACJJDL_000412"
     CDS             complement(16879..17232)
                     /locus_tag="ACJJDL_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HGG7573190.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMFAVFAIWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            complement(17600..17938)
                     /locus_tag="ACJJDL_000413"
     CDS             complement(17600..17938)
                     /locus_tag="ACJJDL_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573191.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRNNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            complement(18074..18934)
                     /locus_tag="ACJJDL_000414"
     CDS             complement(18074..18934)
                     /locus_tag="ACJJDL_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HGG7573192.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            19092..19661
                     /locus_tag="ACJJDL_000415"
     CDS             19092..19661
                     /locus_tag="ACJJDL_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HGG7573193.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            complement(19723..20586)
                     /locus_tag="ACJJDL_000416"
     CDS             complement(19723..20586)
                     /locus_tag="ACJJDL_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG7573194.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAAKKE
                     IVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPVAWNEGAAK"
     gene            complement(20745..21431)
                     /locus_tag="ACJJDL_000417"
     CDS             complement(20745..21431)
                     /locus_tag="ACJJDL_000417"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HGG7573195.1"
                     /translation="MADLTFQQAVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKAVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIIRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            complement(21433..22170)
                     /locus_tag="ACJJDL_000418"
     CDS             complement(21433..22170)
                     /locus_tag="ACJJDL_000418"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HGG7573196.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKTRVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
     gene            22701..24548
                     /gene="ltgA"
                     /locus_tag="ACJJDL_000419"
     CDS             22701..24548
                     /gene="ltgA"
                     /locus_tag="ACJJDL_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HGG7573197.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETAGLSAS
                     VPTRPAEPEGKTLADYSSYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLKPEGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLY
                     KQAVATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFQNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSHVGAQGLMQVMPATAREIA
                     GKIGMDAAQFYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTPL
                     EGAVYAETIPFSETRDYVKKVMTNAAYYAALFGAPHIPLKQRMGIVPAR"
     gene            24837..25049
                     /gene="rpsU"
                     /locus_tag="ACJJDL_000420"
     CDS             24837..25049
                     /gene="rpsU"
                     /locus_tag="ACJJDL_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HGG7573198.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            25181..25627
                     /locus_tag="ACJJDL_000421"
     CDS             25181..25627
                     /locus_tag="ACJJDL_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HGG7573199.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSVKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            25648..25797
                     /locus_tag="ACJJDL_000422"
     CDS             25648..25797
                     /locus_tag="ACJJDL_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573200.1"
                     /translation="MPSEARIAGSDSIFNVPISNRQGQHGFNTPKQVLPINGFRLRPI
                     GQNAV"
     gene            complement(25826..26218)
                     /locus_tag="ACJJDL_000423"
     CDS             complement(25826..26218)
                     /locus_tag="ACJJDL_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HGG7573201.1"
                     /translation="MPTSTKPYVLRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     EYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(26290..26895)
                     /locus_tag="ACJJDL_000424"
     CDS             complement(26290..26895)
                     /locus_tag="ACJJDL_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HGG7573202.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            complement(27012..28673)
                     /locus_tag="ACJJDL_000425"
     CDS             complement(27012..28673)
                     /locus_tag="ACJJDL_000425"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArnT family glycosyltransferase"
                     /protein_id="HGG7573203.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPTAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIGIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVLLPQNADAPQGWQTVWQGARPRNKDSKFALIRKIGENI"
     gene            complement(28819..29448)
                     /locus_tag="ACJJDL_000426"
     CDS             complement(28819..29448)
                     /locus_tag="ACJJDL_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HGG7573204.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
BASE COUNT         7233 a         7833 c         7533 g         6933 t
ORIGIN      
        1 tcgctactac cgttccggcg caacaaacat tcctcgatgc cgccgaactg atgcaatgga
       61 gtatagaaac cgaatggctg ggcttgaatg tcatcgcaca ctgcaacttc ggcaaacagc
      121 acgcccaagt cgaatttgaa gcctgcttcc aagacggaca acaccgatcc gcacatcacg
      181 aactgtccgg cttcgtcaac atcggcggac aatggtattt tatcgatccc accgttccgc
      241 atcctgcgat gaaacaaccc tgcatttgcg gatcgggcaa aaaattcaaa gcctgctgcg
      301 gcaaatatct gaaacctgtc gcataaaaat gccgtctgaa cgttcagacg gcattttcaa
      361 cgtgcaaaaa aaaaccattc ataccaaggg taagtatgaa tggtcaatac attgcgggaa
      421 aacgtcttac ttgctgcact gccgaaaagg gagaaacggc agcggtaatc agcggaaagg
      481 attgtacccg aattaatgtt aagaaacgtt aatcgtgaaa atatattaac aaacctgttg
      541 aaacctattg gttttcccgt atccactcga cccagcgttc aaacagcttc ggttcgagcg
      601 cggcgacgac cgagcgtttg aacacgtgtt caccactcca aaacccgtcg ccttccaaag
      661 tcgtcagcct gccgcccgcc tcctcgaaaa tcaacgcgcc ggcggcataa tcccacagct
      721 tctgcccgcc gtggacataa acatcataac gcccgcacgc cagataacac cagtccaacg
      781 tactgctgcc catactccgt atcgttccaa aaggcgcgag cgtactcatg cggctggaca
      841 gtttgcccga acgcagatat ttgatttcca cgcccgcgat tgcctcattc aacttcttat
      901 ccacgagacg caaaggcagg cgtgtcccgt ttaaaaacgc accctgcccg cgttcagcat
      961 aaaaacattc gccgctgacc ggattgtaga ttacgcccaa ttcggcgcgc ccgttgcgga
     1021 caaacgccac cgacacggca aaatgcggca gcccgttgac aaaattgttt gtcccgtcta
     1081 tcggatcgac aatccacagc cccttttccc ccgaatattg ttcccacaga gccgactgtt
     1141 cctgtcgcga catttcctcg cccaacatcg ggcaatcgat cagaagcggc aacgcggcgg
     1201 caaaagccgt ctgcgcggca atgtccgcct cgctcaacat cgaaccgtct tccttgcggt
     1261 gggacggcgt attcaaaaaa cgcggcataa tttcggtttg cgcgatatgg cgcacgactt
     1321 tctgcaaacg gtgtaacact tcctactgtc ctcatatttt gaacttgcgg cacgcgaacg
     1381 tatatagtgg attaaattta aatcaggaca aggcgacgaa gccgcagaca gtacaaatag
     1441 tacggcaagg cgaggcaacg ctgtactggt ttaaatttaa tccactataa tgtccgtttc
     1501 catcacgccg ctgcgacaga ttataaccgt ccgaaccgcc aaaaactatg ccccgattcc
     1561 acctgcccga aaacctttcc gtcggacaaa ccgtcgccct gcccgacaac atcgtccgcc
     1621 acctcaacgt cctgcgcgtc cgccccaacg aaaacatcac cctcttcgac ggcaaaggca
     1681 aggcacacgc cgcacggctg accgttttgg aaaaacgccg cgccgaagcc gaaatcctgc
     1741 acgaagacac aaccgacaac gagtccccgc tcaacatcac actgatacaa tccatctcct
     1801 ccggcgatcg catggatttc accctgcaaa aaagcgtcga actcggcgta accgccatac
     1861 agcccgtcat cagcgaacgc tgcatcgtcc gcctcgatgg ggaacgcgcc gccaaacgcc
     1921 tcgcacgctg gcaggaaatc gtcatctccg cgtgcgaaca aagcggcagg aacaccgttc
     1981 cccccgtgct gcccatcatc ggctatcgtg aagcactcga caaaatgccg tctgaaagca
     2041 ccaagctgat tatgagcatc aaccgcgccc gcaaactcgg cgacatccgc cacccgtccg
     2101 gcgcaatcgt ctttatggtc gggcccgaag gcggctggac agaacaggaa gaacaacagg
     2161 catttgaagc tggctttcag gcggttacac tcggcaaacg gattttacgc acagaaaccg
     2221 ccccactcgc cgccctcgcc gccatgcaga cgctttgggg cgatttcgca taaacagaaa
     2281 tgccgtctga aacccgttca gacggcattt tgcagccgat taagatagta ggttcaaata
     2341 agatttcccg tgtcgtcatt cccgcgaaag cgggaatcta gaaacgaaaa actacaggga
     2401 tttatccgaa acaacaaacc ctctccgcca tcattcccgc aaaagcggga atctagaaac
     2461 gaaaaactac agggatttat ccgaaacaac aaaccctctc cgccgtcatt cccacgaaag
     2521 cgggaatcta gaaatttaac gttgcggtga tttatcggaa atgactgaaa ctcaacggac
     2581 tggattcccg cctgagcggg aatgacgaat tttaggttgc tgttttttgg ttttctgttt
     2641 ttgcgggaat gacgagattt taggtttctg tttttggttt tctgttctcg cggaaataac
     2701 gaaattttaa gttttaggaa tttgtcggaa aaacagaaat cccgccgccg tcattcccgc
     2761 aaaagcggga atctagaaac gaaaaactac agggatttat ccgaaacaac aaaccctctc
     2821 cgccatcatt cccgcaaaag cgggaatcta gaaatttaat gttgcggtga tttatcggaa
     2881 atgactgaaa ctcaacgaac cggattccca ctttcgcggg aatgacgaag tggaagttac
     2941 ccgaaaccca aaacaagcga aaccgaacgg actggattcc cgcctgcgcg ggaatgacga
     3001 gattttaggt ttctattttt ggttttctgt tctcgcggga ataacggaat tttaagtttt
     3061 aggaatttgt cggaaaaaca gaaatccccc gccgtcattc ccgcaaaagc gggaatctag
     3121 aaatttaacg ttgcggtgat ttatcggaaa tgactgaacc tcaacggact ggattcccgc
     3181 ctgcgcggga atgacgaatt ttaggtttct gttttcaggt ttctgttttc aggtttctat
     3241 ttttggtttt ctgtcttcgt agaaatgatg aaattttaag ttttaggaat ttgtcggaaa
     3301 aacagaaatc cccccaccgt cattcccgcg caggcgggaa tctggaaatt taatgttgcg
     3361 gtgatttatc ggaaatgact gaaactcaac agactggatt cccgcctgcg tgggaatgac
     3421 agtgtatcca tttctaattt taatccgcta tattttacac aaactatttg aacgatatga
     3481 cccgcctgcc gtaagctttc tcaagctccg cctgcctttg acgctccatt cttttcttct
     3541 tttccctacc gaatttaccc aaagcacgct tcaagtcaaa catcaccttc aacgaacggc
     3601 ggtgtcttct ttcttgttcc ctatcttttt ccaaatcgct acccaacata ctgtttttac
     3661 tgaggaactt ggcataatgc aattcttggg tacataaggc gggactaacc tgataaacag
     3721 gcatcccctc cttatcaaag aaataagtaa acatcatcca atctaccgct ttaatccact
     3781 ctgccggcaa aacggcaaac ctttccaaga aaaaccgcat cgcctcacgc gaaatgatat
     3841 agccagccgt cccccaatgt tcgctctcca gcaaaggaaa tgaccggttt tcataattca
     3901 ggactttatc cggtctgaca ataactttcg caaacatcgt ttccaaacgg acaataaagg
     3961 cagaatcctt atcaaaacgc tcttccaacc aagtatcttc ggcaaggaac ttttctgcgt
     4021 ctttgccaag caggacatca tcctcaaata cggcaacata gggcagacct tcatccaatg
     4081 cctgtttcca caatacggcg tggctcataa agcaggcttt ttccacttcg ctcaacaggt
     4141 gctgttttgc caatcccggc accaattccg ccatcacccg attcagttct tcagacggca
     4201 tcagtgcgtc gaaaaactga aacggaatgt cgtgcctgcc gaaggtatcg gcaatgtgcg
     4261 ccctgcgctc tttggcagaa gcaaggctga taacataatt tctcatcaga acctccctta
     4321 aaactggaac cgtcccgttc acaataaaca catcaaaaaa tttttaaatc agaaaaacat
     4381 atggctttgg ctttatagtg aattaacaaa aatcaggaca aggcgacgaa gccgcagaca
     4441 gtacaaatag tacggcaagg cgaggcaacg ccgtactggt ttaaatttaa tccactatgc
     4501 accaggatgt ttatcggaac ggtatgataa ccgcctcact cattttcttt ctttcctccc
     4561 attttttctt ttccctgctg atttttgtca atgcatgaat caatcgctct ttcagtgtcc
     4621 tgtctttatg tttttgtttt gggattttac ttcgctcatc ttccaataaa ctacccaacg
     4681 cgctgctttt attatgaaac ttagtgtaat gcaattcctg ggcgcataag gccggactga
     4741 cctgataaac aagcactccc tccttatcga aaaaatcact gaacatcatt aggtcgatag
     4801 gttttatctg ttccggctgc aacattacga aatgttgcag gaaaaaccgc attgcttttc
     4861 gggaaatgat atagcccgcc gtcccccagt gttcgctttc caacagcgga aaggcgcgcc
     4921 cgccgtaatc cgccacgccg gagggcgagg tcaggacgtg cataaacatc gtttccaagc
     4981 ggacgataaa ggcggaatcg gggtcaaagc gttcttgcag ccaagcgtct tcggcaagga
     5041 atttctccgc gccttcgccg agtaaaacgt cgtcctcaaa tacggcgata tagggcagac
     5101 cttcgtccaa tgcctgcttc cacaatacga cgtggctcat gaaacaggct ttttccacac
     5161 tgctcaaata gggatgcgcc gacaagccgg ggacgagttc cgccatcgcc tgttccagtt
     5221 cttcagacgg catcagtgcg tcgaaaaact gaaacgggat gccgcgcgcg ccgaaggtat
     5281 cggcaatgtg cgccctgcgc tctttggcgg aagctaagct gataacgtgg ttttgcatga
     5341 tttatcctgt ttttttgtct gccggatctg gccgcgcctg ccagcggttt ttaatcagcc
     5401 ggcgtaaaat gctgaagtat tgcctcatgg taaacagccg cctcatcttg ccgtctgccg
     5461 caaaatccag ccacgcgccg gcgggcagcg tgtccgtccg tttgaagcat tggtacaaaa
     5521 accggcgggc gcgttcaaaa tcttcttccg gcaaatgttt ctccagcaat tcatacgcta
     5581 ctgcttttat ttggcggtat tcaaggctgt cgaaccgggt tttaaaaccc atagactgca
     5641 aaaaatcgtt tctggcggtt ttttggatgc cttgcgcgat ttcgtgttgg cggacgctgt
     5701 atttggatga aacctgattg gcgtgaaggc ggtatttgac caaggcttcg ggataataag
     5761 ccagcctgcc caatttgctg acatcgtacc aaaattggta atcttccgcc caatcccgct
     5821 cggtgttgta acgcaaaccg ccgtcaatga cgctgcgcct cataatcatc gtgttgttgt
     5881 gtatggggtt gccgaaaggg aaaaagtcgg caatatcttc gtgtcgggtc ggctttttcc
     5941 aaattttgcc gtgcctgtga tgccgcgcca gccggttgcc gtccttttct tccgacaaaa
     6001 cttccagcca cgcgcccatc gcgatgatgc tgcggtcttt ttccatctcg cccacgattt
     6061 tctcaatcca gtcgggggcg gcaatatcgt cggcatcggt gcgtgcaata tattccccca
     6121 ttcctgactt tgccaattcg tccagcccga tgtttaaaga gggaatcagg ccggaattgc
     6181 gcggctgcgc gaggatgcgg atgcggccgt cctgttcttg gaaacgccgg gcaatggcaa
     6241 gtgtgccgtc cgtcgagccg tcatcaacaa tcaaaatatc caagttgcgc caagtctgat
     6301 tcacgacggc ggctaatgat tgggcgaaat atttttctac gttgtaggcg caaatcaata
     6361 cgctgactaa aggctgcaat ttattctccc gataggcacg atgccgtctg aaggcttcag
     6421 acggcatttg gactgtacaa cggttactcg cccaaaagcg cgatgtcggc taccgcgttc
     6481 atttgctctg ccaagcggtt cagcaggttc aggcggtttt gttttacggc ggcatcttcc
     6541 gccattacca tcacgccgtc aaagaatgca tcgacttgcg gtttgacgga agccagttcg
     6601 gacaaggcgg tttggaaatt gccttcggcg acggcggcgg cgattttcgg ctgcaagcct
     6661 tgcgcggcgg caaagagggc tttttcttcg tcctgttgca acaggctttc atcgacttcg
     6721 cccaacgcgg catcggcttt tttcagcagg ttttgcacgc gtttgttggc ggcggcgagc
     6781 gcggcggctt cgggcagttg tttgaacgcg gcgacagcct gcagtttggc ggtcaaatcg
     6841 tccaaacggc gcggctgttt ggcgagtacg gcggcaacga tgtcttgcgg ataatcgttt
     6901 tgcagcaaca cggcaaggcg cgcctgcata aagtcggcgg tttcagacgg cgttttctcg
     6961 ttgagcaaac ctttggggaa gctgtcgaag gtcgtctgaa tcagctcgtt cacgtccaaa
     7021 ccatactgca tcagcatccg caaaataccc aaggcggcgc ggcgcagggc gtaggggtct
     7081 ttgtcgccgg tcggaatcag gccgatgccc caaatgccga ccagggtttc cagtttgtcc
     7141 gccagtgcca cggcggcggc aattttgctt tcgggcagct tgtcgccggc aaaacgcggc
     7201 tgatagtgct gctcgacggc ttcggcaatt tcttcggttt cgccgtccaa gcgggcgtag
     7261 tatttgccca tcgtgccttg cagttcgggg aactcgccga ccatttcggt tactaagtcg
     7321 gcttttgcca aacgcgcggc gcgttcggct gcggcagcgt ccgcacccaa agctttggcg
     7381 atgtgggcgg caatgctttg caggcgttcg atgcgctcgg cttgcgaacc aattttgttg
     7441 tggtaaacca catttaccag cttgggcagg cgactttcca aagtcgcttt ctggtcttgt
     7501 ttgtagaaga attcggcatc agacaggcgc gcgcgcaata cgcgttcgtt gcctcggatg
     7561 atgtgcgacg ggtctgcagt ttgcaggttg gaaaccagca ggaagcggtt catcagcttg
     7621 ccgttttggt cgagcagcgg gaagtatttt tggttttgct gcatcgtcag aatcaggcat
     7681 tcttgcggca cggcgagaaa atgctcttca aaaccggctt ccaataccac aggccattcg
     7741 accaatgcgg tcacttcgtc caacaatgct tcatcggcgg caacagtcgc gttcagacgg
     7801 cgtgcctgcc cttccaatgc cgtctgaatc gcagctttgc gctcggcaaa cgaagcttcc
     7861 actttgcctt gctcgcgcat ttgtgcggcg tagctgtcgg cgttttcaat ggtgatttct
     7921 ccgtcggaga ggaagcggtg tcccaaggtt tgattgccgc tttgcaaacc caaaacgctg
     7981 acgtttacaa tgtcgccgcc gtgcagcaca atcagcccgt gaacagggcg cacgaaggta
     8041 aacgtgctgc tgccccaacg catcactttc ggaatcggca gtttcttaac ggcttgattg
     8101 ataatgtctt ccaaaagttc gcccagcggt ttgccggttt ggacgtattc gtaggcgtac
     8161 acatcctgtt tgccgtcgtg gacgatggtc aagtcttcga ttttcgcgcc cgcaccgcgt
     8221 gcgaaacctt ccaaagcctt ggtcggcgca ccgtctttca tggcattcgc cacggcaggg
     8281 ccttttttca cgattttttg gtcggcctga acggctttaa cgtttttgac ttgaaccgcc
     8341 aaacggcgcg gcgaggcata agccgtaaat tcggctgcac cgtcaaccag ttgcgctttt
     8401 tccaagcctt cggcaacggc ggcggcaaaa tggttgccca gattattcag tgctttgggc
     8461 gggagttctt cggtaaggag ttcgattaaa agggtttggg tcatcattcg gctttcttta
     8521 aatttggtta atctgcctgt ttataggttt cactgtaatt ttcccagccg tcatccccgt
     8581 aaaaaccgtc aaccagcggg gtggtgtgca aagtggcgac atcttcgcgg cctgccagcc
     8641 aagagataat ggcttttttc tcggtttcgc ccaagcttcg ggcaccggat ttttgaaaca
     8701 ggcacgaaaa atcgccgcaa tcgcccccgc ccgccattcc aaagtcgttt acctcaagat
     8761 acgcaatcag ctcgtccata aagcggtcga acgcttcggc atcgtcctca gcttggtgca
     8821 aactgccttg aacgccgaaa atcaatgttt gaaactcgcc caaatgcagc tttttatgct
     8881 ggcggcggtt cattttgtgc aggcgtttcc tgcttggggt gcggaaatag acaggcatga
     8941 ttttcctaaa atatataatg gtttacggac ggctgcctta tcgtgccgcc cgaacgtaaa
     9001 aaatcgtcgc ccccttaggc agcatttgcc ttcattaaag ggaagcccag tttttcgcgg
     9061 ctttcaacat atttttgcgc cacggcgcgg ctcaatgcac gaatacgtcc aatataagtt
     9121 gcccgctcgg ttacggaaat cgcgccgcgt gcgtctaaaa gattgaacgt atgccccgct
     9181 ttgagaacca gctcgtaggc aggcaaggcg agggcggcgt tttcttcggc aagcaggcgt
     9241 ttggcttgcg cttcgtagtc gttgaactgg cgcagcagcc aatcggcatc gctgtattcg
     9301 aagttgtagg tggattgttc gacttcgttt tggtggtaca cgtcgccgta gcttacggtg
     9361 ttgccgtccg gcgtttttgc ccaaacgagg tcatagacgt tttccacgcc ttgcaggtac
     9421 atcgccaagc gttcgatgcc gtaggtgatt tcgccgagta cgggcgtgca gtcgatgccg
     9481 ccgacttgtt ggaaataggt aaactgggtt acttccatgc cgttgagcca aacttcccag
     9541 cccaagcccc atgcgccgag ggtggggttt tcccagtcgt cttcgacgaa gcggatgtcg
     9601 tgcactttgg ggtcgatgcc caattcgcgc agggagtcga gataaaggtc ttggatattg
     9661 gcgggggcgg gtttgagggc gacttggaat tggtaatagt gttgcaggcg gttggggttg
     9721 tcgccgtagc ggccgtcttt ggggcggcgg ctgggttgga cgtaggcggc aaaccaaggc
     9781 tcgggcccga gcgcgcgcag gcaggtggcg ggatgggatg tgccggcacc gacttccatg
     9841 tcgaagggtt ggatgacggt gcagcctttg tctgcccaga aggtttgcag tttgaagatg
     9901 atttgttgga aggtaagcat ggcttatgat tcgataaaat aaagggttta ttttactgtt
     9961 tccattgctg tttggatagg tttatctcaa agacagactg atttgaaaac acggcataca
    10021 tgatatagtg gattaaattt aaaccagtac agcgttgcct cgccttagct caaagagaac
    10081 gattctctaa ggtgctcaag caccaagtga atcggttccg tactatttgt actgtctgcg
    10141 gcttcgtcgc cttgtcttga tttttgttaa tccgctatat gtttcggtta ggcggcaggc
    10201 tgccctattg aataccttaa agcaggctat gcctgccaac gccatatcca aacacagtct
    10261 ttaatttaaa tccggaaaat aaaaagcacg accaaacggt cgtgcttttc caaaccaaac
    10321 aagtttattt cttgtgcgaa cggatatagt ccaaagtttt aagctgtgca atcgcagcag
    10381 ccaatgcttt atgcgcctcc gccaaagcct tatcgtcttt agcttgggaa atgcccgctt
    10441 ctgcggcttt tttcgcctct tccgcacgtg cctgatccat ctctgcactg cggacggcaa
    10501 catccgccaa gacagttact ttatcaggct gtacttccaa aacaccgccg gaaacagcaa
    10561 ccaaaacctc tttatcctcg cccggaacgg tcaaacgcaa agcccccggc cgcaccaaac
    10621 tcataatcgg ctcgtgtcgc ggataaatac cgagttcgcc ctgtacagtc ggaacaacga
    10681 taaatgttgc ctcgcctgaa tagattttct gctcgctact taccacctca acttgcatga
    10741 tgctcatgcc gacctcctca gtttaaggtt ttcgctttct caaccgcttc ttcaatgctg
    10801 ccgaccatat agaatgcctg ctcgggcaga tgatcgtatt cgccgttcaa gatggctttg
    10861 aagccggcaa tggtatcgcg cagggcgaca tatttgcccg gagaacctgt aaacacttcg
    10921 gcaacgtgga acggttggga caggaagcgt tggattttac gcgcacgcat tacggtcagt
    10981 ttgtcttcgt cagacaattc gtccataccc aagatggcga tgatgtcgcg caattctttg
    11041 tatttctgca gggtggactg tacgccgcgc gccacgtcgt agtgctcttg acccaagacc
    11101 atcggatcca gttggcgcga agtggaatca agcggatcga ctgccgggta aatacccaaa
    11161 gaggcaatat cgcggctcaa tacgacggtt gcgtccaagt gggcgaacgt tgttgccgga
    11221 gacgggtcgg tcaagtcgtc cgcaggtaca tatacggctt ggatagaagt aatagaaccg
    11281 gtttgggtag aggtaatacg ctcctgcaaa cgacccattt cttctgccaa tgtcggttgg
    11341 tagcccactg cagacggcat acggcccaac aatgcggata cttcggtacc agctagagtg
    11401 taacggtaga tgttgtccac gaagaacaat acgtcgcggc ctttgccgtt ttcgtctttt
    11461 tcgtcacgga agtattccgc catggtcaaa ccggtcaatg cgacgcgcaa acggttgccc
    11521 ggaggttcgt tcatctgacc gtaaaccatt gccactttat ccaatacgtt ggaatctttc
    11581 atctcgtggt agaagtcgtt accttcgcgg gtacgctcac ccacgcctgc gaacacggac
    11641 aagccgctgt gcgctttggc gatgttgttg atcaattcca tcatgttcac ggttttaccc
    11701 acaccggcac cgccgaacag acctacttta ccgcctttgg caaacggaca cagcaagtca
    11761 atcactttaa tgcccgtttc gagcaattcg gttgtggaag acagttcgtc aaacttagga
    11821 gcggcttggt ggatggcacg actcttgtcg gtatcgatcg gacctgcctc gtcaacaggc
    11881 gtacccaata cgtcgacaat acgacccaat gtacctttac ctaccggcac agtaatgggc
    11941 gcaccggtat tgctcacagt catgccgcgt ttcaaaccgt ccgagctgcc catcgcaatg
    12001 gtacggacta cgccgtcgcc caaaagctgt tggacttcca aagtcagacc gttttcgtct
    12061 aatttcaaag cgtcgtaaac gcgcggaatc atgtcgcgtg gaaattccac gtcaacaacc
    12121 gcaccgataa tttgtacgat tttgccttgg ctcattatcg tatcctaatt tctgtacagg
    12181 attcagacgg catcagacag ccgccgcacc tgctacaatt tctgacaatt ccgtggtaat
    12241 cgcagcttga cgcgatttgt tatataccaa acgcaactct ttgatggcat tgcctgcatt
    12301 gtctgttgca gctttcatgg caaccatgcg ggctgcctgt tcggatgcca tattgtcgct
    12361 caacgcctga taaaccacag actctaaata gcggcgaacc agatattcca acactgcaag
    12421 tgcagtcggt tcgtagcggt attcccagct gaacggtgat ttgggagctg aatcgccaat
    12481 cacgttctca ccgataggca gcaatacttc cattctcggt tcttgacgca tggtattgac
    12541 aaaacccgaa tacaccagat ggattctgtc aatttcatgt ttctcatacc gttggaagag
    12601 ttctgtcaaa ggtccgagca gcatttccat ttttggggta tcgcccaaat ttacggcact
    12661 ggcaaccaca ttcagaccaa tgctctgaca cgccatcaga cctttactgc caaggcatac
    12721 gatttcctct tcaatacctt gattccgata ctcttgaact tgtgccaaaa actttttcag
    12781 cacgttggcg ttcaaaccgc cacacaaacc cttatcagac gtaatcaaaa taaaaccgac
    12841 acgtctgatt tcccgatgag attccagtaa cggaatacca tgatcggtat tggtttgcgc
    12901 aagatggctc atcaccatac gcactttttc ggcatacgga cgcgccaaac gcatccgttc
    12961 ctgagtcttc cgcattttag aggttgacac catctgcatc gctttagtga tcttttgggt
    13021 attctgaaca ctgcggattt tggtgagaat ctcttttcct actgccattt cagactcctt
    13081 tcacttcaag ccttatgcct gataggcgta agaagatttg aaggatttca tggctgcttc
    13141 aagcgttttc tcgctctcgt cggacattgc acctgaagca ttgacggctt ccaaaacttc
    13201 cggatgttgg gtacggacaa agctcaaaaa ttcagattca aaagccagag ctttggcaac
    13261 cggaacatca gaatacgaac cgttgttgat tgcccaaagg gtcaaagcca tttcagccgt
    13321 attcaacgta ctgaactgtt tctgtttcat cagttcggtt acgacttcgc catgctccaa
    13381 ttgtttgcgc gtagcttcat ccaaatcgga tgcaaattgc gagaaagccg ccaattcacg
    13441 atattgcgcc aacgccaaac ggataccgcc acccagcttt ttaatcactt tggtttgtgc
    13501 agcaccgcct acgcgggata cggaaatacc ggcattgatt gcaggacgga taccggcgtt
    13561 gaagaggtcg gtttccaaga aaatctgacc gtcggtaatc gaaatgacgt tagtcggaac
    13621 gaaagcagat acgtcgcccg cttgggtttc gataatcgga aacgcggtca gagaaccggt
    13681 tttgcctttt acttcgccgt tggtcaattt ctccacttcg tgttcattga cacgtgctgc
    13741 acgttccaac agacgggagt gcaggtagaa cacatcgccg ggataggctt cgcggccggg
    13801 cggacggcgc aaaagcaggg aaatttgacg gtaagccaca gcctgtttgg acaaatcgtc
    13861 ataaacaatc aaggcatctt cgccgcggtc gcggaagaat tcacccatcg tacaaccgga
    13921 gtaaggtgcg atatattgca atgccgccgc ttcagatgca gttgcagcaa ccacgatggt
    13981 gtgttccatc gcgccatgct cttccaattt gcggaccacg ttggcaatag aagatgcttt
    14041 ttgaccgata gcgacataga tacagataac gcccgtacct ttttggttga cgatggcatc
    14101 caatgctacg gccgttttac ctgtctgacg gtcgccaata atcaactcac gctgaccgcg
    14161 accgacagga accatagagt caatcgcctt cagaccggtt tgcatcggct ggtcaaccga
    14221 tttgcgcgca atcacgcccg gtgcgatttt ttcgataggg gcggtcaaag ttgtattaat
    14281 cgggcctttg ccgtcaatcg gacgacccaa tgcatcaacg acgcgtccga ccagttcgcg
    14341 tccgaccggc acttccaaga tacgaccggt acaagtaacc gtgtcgcctt ctttaatatg
    14401 ttcgtactcg cccaacacta cggcgccgac ggagtcgcgc tccaggttca tcgccaagcc
    14461 gaaagtgtta cccgggaatt cgagcatctc accttgcatt gcatctgaca aaccatggat
    14521 gcgaacgata ccgtcagtta ccgaaatcac cgtaccacgg gtacgcactt cggcatttac
    14581 agacagattt tcgatcttgg ctttaatcaa atcgctaatt tcagcaggat taagctgcat
    14641 gaaaactctc ctaattcgtc atagtcgtgt acaaggcact caatttgcct tgtacagaca
    14701 aatccaaaac ctgatcaccc acttcaactt ttatgccgcc aatcagctct ggttcgattt
    14761 cgacagagat tttcagctcg ctgtcgaaac gcttattcag catttgcgcc aactcgccga
    14821 cctgtttgtc ggtcaacgga taggcactgt aaatgacggc agatttgata tggttgaatg
    14881 ataaggtcaa gtcttgatat tgagcatata cttccggcaa tatcgacaaa cgtttctgcc
    14941 cggccaagac gataacaaag tttttcaact ccttgtcttt caaaccgacc aaatcgatga
    15001 ggatatctgc tttttctgaa gcattcgttt caggacggtc aatcaatgaa gccaccttcc
    15061 cttcctgaac aaccgccgca agtttttcca gtccgcccaa ccaagactca atttggtttt
    15121 tttcctgagc cagaccgaac aatgcctttg cataaggtct ggcaatcgtt gcgaactctg
    15181 ccataagatt acagctcctg tttcagggta tcgagcagtt ttgcgtgttt ggaagcatcg
    15241 acttcgctgc gcaaaataga ttcggcacct ttgacagcca acacggcaac ctgctcgcgc
    15301 agggattcgc gtgcgcggaa caattcctgc tccacatcgg cctttgcctg agctgcaatg
    15361 cgcgccgcct cggaagaagc ctgttctttg gcttcttcga caattttggc ggcacgtttt
    15421 tcggcgttgg caaccatttc ggaaacctga ttacgccctt ctgccaagag ttctgcaacc
    15481 tttttttcag cctgctcgaa atcgctttta ccacgctcgg cggcagccaa gccttcggcg
    15541 acttttgcgg cacgctcatc caaagctttt gcaatcggcg gccacacgaa tttcatggta
    15601 aaccatacca aaccgaaaaa gacgatgatt tgagcgaata atgttgcatt gatattcacg
    15661 ttacttaacc ttcgtactgg ggttaatcaa acaggctgcg cctgtacgga acggacgaat
    15721 ccgtcctgat tatgcacctg caaacgggtt aacgaaggcg aacagcagtg caatggcgac
    15781 accaatcaag aatgcggcat caatcaaacc ggcaatcagg aacagtttgg tttgcagcgg
    15841 accgatcagt tcgggctgac gggcagaaga ctccaaatat ttagaaccga ccattgcgat
    15901 accgatagag gcacccaatg cacccaatgc aacgatcaaa ccacatgcga tagcaatcaa
    15961 acccatttta aactccttaa agaaacaaag gttaaactac aaaaacaaac tacttaggaa
    16021 aatcagtgcg catcatgtgc ctgtccgata tagacgaacg ccaacgccat gaaaataaac
    16081 gcctgcaggg taatcaccaa aatatggaaa atcgcccatg ccaaaccggc aatgatgtgg
    16141 aatacaaaca gaatcggatc catgacttca acactgccgg aagccgccca agcaccgcca
    16201 agcaaggcta tcagcaagaa taccaattcg cccgcataca tattgccgaa caaccgcata
    16261 ccgtgggata cggttttaga aagaaactcg accaagttca acagaaagtt cgcaggtgcg
    16321 agttttgcac cgaacggcgc actgaacaac tcatgaaacc atccgcccaa tcctttgatt
    16381 ttgatgttgt aatagataca aatcagcaac acgccaacag cgagtgccaa agtggtgttc
    16441 aaatcggcag tcggtacgac gcgcagcagg gcgtgatgat tgccggtaat gccctgccat
    16501 accatcggca gcaaatcgac cggcagcata tccatcgcgt tcatcaggaa aatccaaaca
    16561 aacagcgtca gacccaacgg cgcgacggct tttctagact tttcgttgtg aatgatgctc
    16621 ttacacatat cgtccacaaa ctcgaacagg atttccaccg cagcctggaa acgcccgggg
    16681 acgcctgctg ttgctttttt tgcaccacgc cacaacagga agctgccaat tacgcccaac
    16741 aggacggcaa aaaagacggc atcaaggtta ataaacgaaa aatcagcaat gtttttcagt
    16801 ccctgaccct gagtaacatc cgacaaactg gtcaagctct gcaagtggtg cttgatgtag
    16861 tcggcagcgg taatggtttc acctgccata atctttcact ctcaacaata ctaaaaaaac
    16921 cagatggctg acaccgagta gccccatcag aaacggggcg aacaccagcg attgatgcca
    16981 tattgcaaat acggcgaaca tggacaacag cgacagcact acttttaaaa tctctccgaa
    17041 gacgaacatc ctgctttgca gaaaggggtt tcccctgaaa agttttaaaa gtaaaactgc
    17101 aacaaacgtg ggaagcagat aggacaaacc gcccccgacc gccgaaagga atccggcaaa
    17161 accccatacg gcaaaggcaa ctgcggcgca tatggacaat acggcggatt gtaggatgat
    17221 aatctgcttc ataaagggaa tgtttccgcc tcggatttga ggcgcggcta atataattta
    17281 gaagccttat tacgtcaagc gacagttaat ctttgtgaaa caacgtatcc caatccgccg
    17341 cgcccgccgc ctgaataacg gcgacaggtg tcattctaac acacattaca tataattaca
    17401 ggatattaag gagtttgtcc gcaatttctt tacactttta atgttcttac gtgatttgtt
    17461 tgctttacgt ggaaataata aaaaatcaac gcgaaattgt agcagtttat cggtcggatt
    17521 gtcggcagtt tggggaattt gctcaataaa taaaaggtcg tctgaaaata ttttcagacg
    17581 accttttccg aataaaggat tagcaacggc ctgccgcttt aagcaaagca ttgcattgac
    17641 ttttgccttt gtgcgttccg cctcccaaac aaattgcatc ggaagtggta acgccgattg
    17701 tgctgattac actggtaaca tagcattggc tcacgcgctt acccacagtt gcggtaaagt
    17761 tgatgcgtat gccttcattg ttgcggttgc tgatttttac ggcatttggg ctgacgccca
    17821 aggcaaacgc ggcacgttcc tgaagtttct ggtcggaaac ggttacatta ttgattgagc
    17881 cgcaacctgc taatgccaac gcaacgaacg cagccgaaac gatgatgcgt gtgttcataa
    17941 tttcctcgaa aattaaaaat gaaaacagga aaacgattct tacgtgaagc agaaaaaatg
    18001 tcaatagaat tatatttccc acttaaaatc tggaaagcta ttctctatat ttcagacggt
    18061 atatcccgca aaattaaggt cggtaatcta tgcccaattg cttcaagata tggtcgaagg
    18121 tttcgggcgt gtcgaaatgc aggatgattc tgcctttttt atggttggcg gttttgattt
    18181 cggcgttgac acccagtttt tcagtcagca aatcattcag gcggccgatg tcggcggcgg
    18241 cagttttttt gggctcggga cgtttgtttt gaagggcggc ttggctgcgg cgttcgactt
    18301 cgcgcaccga ccagccgttt ttgacagcct tttgcgccaa ttcgagctgt tcgacgacgg
    18361 gcagggtcag cagtgcgcgg gcgtgcccca tttcgaggcg gcgttggtaa agcatttcct
    18421 gcacgggttc gggcaggctt aaaaggcgca ggctgttgga aatcgcgctt cggcttttac
    18481 cgacggcttg ggcgatggtt tcgtgggtca gcccgaactc gtcggcaagg cgtttcaagc
    18541 cttgtgcttc ttcgatgggg ttgaggtttt cgcgctggag gttttcgatc aaacccattg
    18601 ccaacgcggt ttcgtcgctg atggttttga taacggcggg gatttcggtc aggccggcaa
    18661 tctgtgcggc acgccaacgc cgctcccccg caatcagttc gtatcgggac agtccgtgtt
    18721 cgcgcacgat gacgggctgt atcacgcctt gcgccttaat cgaatctgcc agctcctgca
    18781 aggcttcgtc atcgatttga acacgcgcct gatagcggcc gggccggata tctttaaccg
    18841 caaccgtggt caatcggtcg ccgctgctgt tgtctgcgcc gttggcgagc agcgaatcca
    18901 aaccgcgccc caatccgcct tttacttttg ccataccgcc ctcccgtgcc tattcagata
    18961 ggatgttaaa tcggatattt tatcggatat tgggtgttgc cgacaatttg tatccgtatt
    19021 tatcggattt ctgttttttc actataatag ccggtttgcc gttgcaggcg gttttatggg
    19081 aaaggcggat gatggtacgg cgtttgataa tcggcatcag tggggcgagc ggtttccaat
    19141 acggcgtgaa ggctttggaa cttttacgcg cgcaagatat cgaaacgcac cttgtggtat
    19201 cgaaaggtgc ggagatggcg cgcgcttcgg aaacggctta tgcgagagac gaggtatatg
    19261 ccctcgcgga cttcgtgcat ccgatcggca atatcggggc gtgcattgcc agcggtacgt
    19321 ttaaaacgga cgggatgctg gtcgccccct gttcgatgcg gacgcttgcc tcggtcgcgc
    19381 acggcttcgg cgacaacctc ttgacgcgtg cggcggatgt ggttttgaag gaaaggcggc
    19441 ggctggtgct gatggtgcgc gaaacgccgc tgaaccttgc ccatttggac aatatgaagc
    19501 gggtaacgga aatgggcggc gtggtgtttc cccctgttcc tgcgatgtac cgcaaaccgc
    19561 agacggcgga cgacatagtg gcgcacagtg ttgcacacgc tttgtcgctg ttcggaatcg
    19621 atacgccgga ttcggcggaa tggcagggaa tggcggatta aaggacaaaa atgccgtctg
    19681 aacacggata cggttcagac ggcatcattt tatacgactg ccttatttgg ctgcgccttc
    19741 attccatgcg acaggggatt tgtagccctc gaagcgtttg tgcgcgtagg ctttgaacgc
    19801 gtcggagtta taggcctcgg ttacgtcttt aagccattgg ctgtctttgt cggcggtttt
    19861 gacggcagac cagttgacat aggcaaagct cggttcttgg aacagggctt cggtcagctt
    19921 catgccgctg cttatggcgt agttgccgtt gacgacggca aaatccacgt cggcgcggct
    19981 acgcggcagt tgcgcggctt caagctcgac gattttgatg tttttcaggt tttcggcaat
    20041 gtccgctttg gatgcggtca gcggattgat gccgtctttg agtttgatcc aacccagttc
    20101 gtcgagcatc accaagacgc gggcgaagtt ggacgggtcg ttgggcgcgg atacggtgct
    20161 gccgtctttg acttcttcca gcgatttcag cttgcccggg tacagtccca aaggcgcggt
    20221 cggcacttgg aagacttcgg tgatgtccag attgtgttct tttttgaagt cgtcaagata
    20281 gggtttgtgt tggaagacgt tgatgtccaa ctcgccctca gccaatgcca gattcgggcg
    20341 cacatagtcg gtaaactcga ccagtttgac ggtgtagcct tttttctcca gctcgggttg
    20401 gatttgttct ttgaccatat cgccgaagtc gccgacggtc gtgccgaaga cgatttcttt
    20461 tttcgccgcg ccgttgtcgg cggcggcaga agcggatgcg gcgggcgcgc tatctttttg
    20521 accgccgcag gcggcgagga tgagcgcgag tgcggcggcg gaaagggttt tgaagaaggt
    20581 tttcatattt tctcctgatg ttgtggcagt ttcaaacaaa aatgacgggc agggagtcct
    20641 gccgtccgga ttcggcgttc agacggcatt tgccgcgaac agggggattt tatagcattt
    20701 ttcggatagc ggtgggggtt ttggcgttca gacggcattt gggttcaacg tttgtcgagt
    20761 ttccgcgcca acgcgttgcc ggtgctttga atcaggatga ccagcagcac gaggagggcg
    20821 acgatgaaga cgatgacttc ggtttggtag cggtagtagc cgtagcggat ggcgaggtcg
    20881 cccaagccgc cgccgcctat catccctgcc gccgcgctgt atgacaaaag cccgatggca
    20941 agcacggtaa tgctggaaac catgcccgcg cgcgcttcgt ttaagaggac tttgcggatg
    21001 atggcaaccg gcggcgcacc catagcggcg gcggcttcaa tcacgccttt ggggacttcg
    21061 cgcaggtttt gttccaccaa acgggcaaaa taaaacaatc ccgacacgct caacaccagc
    21121 gaggcggcaa ccggaccgat ggtgctgccg acgatggcgc gtgtggcggg tatcatcgca
    21181 atcatcaaaa tgacgaaggg gaaggcgcgc atgaggttga cgaggttgtc gagcaggaag
    21241 ttcaccgcct tgttgtaatg cagttggcgg ctggaagtta cgaagagcaa cacgcccagc
    21301 aacgtgccga aaacgacggc gaatgtggtg gacaagccga ccatcacgaa ggtttcgccc
    21361 aatgcgcgga cgatttcgcc tttcataccg atgatgttgg aaacggcttg ttggaatgtt
    21421 aagtctgcca tatcagtcct cccgaatcag ttcgcgcccg atgtcggatc gggcgtggat
    21481 ttggttgccg cgtacttcga cgatttcgac gactttgcct ttgtccaaca gggcggcgcg
    21541 gtcgcacagt cgtctgatga cgctcatttc gtgggttacg atgacgatgg ttacgttgaa
    21601 tcgtttgttg atgtcttcca aacattccaa gacgctgcgc gtggtggcgg ggtcgagggc
    21661 ggaagtgggt tcgtcggcga ggatgacttg gggtttgggc gcgagtgcgc gggcgatgcc
    21721 gacacgctgt ttctgcccgc cggaaagctg ggcgggatag tggccggcgc gttcggtcag
    21781 tccgacgatt tcgaggcatt cggcaacgcg cgttttgatt ttttcagacg gccatccggc
    21841 gatttccaat gggaaggcga cgttgccggc gacggtgcgg ttgttcaaca ggttgaactg
    21901 ttgaaatacc atgccgatat tctgccgcgc ctgacgcaat gcggcggcat caagcgcggt
    21961 cagctcttgt ccgcagacgt tgaccttgcc gctgtcggga cgttccaaca ggttaatcag
    22021 gcgcaacagg gtggatttgc ctgcacccga ataacccatc agcccgaaga tttcgccgtc
    22081 gcggatttcg aggctggtcg gctcgacggc ggcaaaacgg gtcttgtcgc gcgtttggta
    22141 atgcttggaa accttgtcca aaataatcat tgtcttttcc atacaacaaa gcccgatgtc
    22201 ggacacaacg ggcgcggaag ataaagctga aattgtcgga acgctttagc tgttatgccc
    22261 gcaagctgtg tcaaatcggc aggttaattt tcgtaggata ttatcgggaa agcatttttt
    22321 tgtcaataaa gcaggaagcg ggcaaccatt tcggacaatg ccgtctgaaa cgggcaaagg
    22381 cagcggttcg caccaaaacg gcaaataatt gaaaaacata tagtggatta acaaaaatca
    22441 ggacaaggcg acgaagccgc agacagtaca aatagtacgg aaccgatcca cttggtgctt
    22501 cagcacctta gagaatcgtt ctctttgagc taaggcgagg caacgccgta ctggtttaaa
    22561 tttaatccac tataaattat gtcggaaaca ttccaaaggc ggtgcagttt cggcatataa
    22621 ttcgggcaaa cgcctgttca gacggcattt tgtcttttcc aaccctgacc gttcagggtt
    22681 ccgattctta aggaaatccg atgtacctac cctctatgaa gcattccctg ccgctgctgg
    22741 cggccctggt gcttgccgcg tgttcttcga cacacgcgcc cagcagcaag accctggcag
    22801 acaatataga aactgccggt ctttcggcaa gcgttcccac ccgccctgcc gaacccgaag
    22861 gaaaaacgct ggcagattac agcagctacc cttccgcact ggatgcagtg aaacagaaaa
    22921 acgatgccgc cgtcgccgcc tatttggaaa acgccggcga cagcgcgatg gcggaaaatg
    22981 tccgcaacga gtggctgaag tctttgggcg cacgcagaca gtggacgctg tttgcacagg
    23041 aatatgccaa actcaaacct gaagggcgcg cccaagaagt cgaatgctac gccgattcga
    23101 gccgcaacga ctatacgcgt gccgccgaac tggtcaaaaa tacgggcaaa ctgccttcgg
    23161 gctgcaccaa actgttggaa caggcagccg catccggctt gttggacggc aacgacgcct
    23221 ggaggcgcgt gcgcggactg ctggccggcc gccaaaccac agacgcacgc aaccttgccg
    23281 ccgcattggg cagcccgttt gacggcggta cacaaggttc gcgcgaatat gccctgttga
    23341 acgtcatcgg caaagaagca cgcaaatcgc cgaatgccgc cgccctgctg tccgaaatgg
    23401 aaagcggttt aagcctcgaa caacgcagtt tcgcgtgggg cgtattgggg cattatcagt
    23461 cgcaaaacct caatgtgcct gccgccttgg actattacgg caaggttgcc gaccgccgcc
    23521 aactgaccga cgaccaaatc gagtggtacg cccgcgccgc cttgcgcgcc cgacgttggg
    23581 acgagctggc ttccgtaatc tcgcatatgc ccgaaaaact gcaaaaaagc ccgacctggc
    23641 tctactggct ggcacgcagc cgcgccgcaa cgggcaacac gcaagaggcg gaaaaactct
    23701 acaaacaggc ggtagcgacg ggcaggaatt tttatgccgt actggcaggg gaagagttgg
    23761 ggcgcaaaat cgatacgcgc aacaatgttc ccgatgccgg caaaaacagc gtcctccgta
    23821 tggcggaaga cggcgcgatt aagcgcgcgc tggtactgtt ccaaaacagc cgaaccgccg
    23881 gcgatgcgaa aatgcgccgt caggctcagg cggaatggcg ttttgccaca cgcggctttg
    23941 acgaagacaa gctgctgacc gccgcgcaaa ccgcgttcga ccacggtttt tacgatatgg
    24001 cggtcaacag cgcggaacgc accgaccgca aactcaacta caccttgcgc tatatttcgc
    24061 cgtttaaaga cacggtaatc cgccacgcgc aaaatgttaa tgtcgatccg gcttgggttt
    24121 acggtctgat tcgtcaggaa agccgcttcg ttataggcgc gcaatcccac gtaggcgcgc
    24181 aggggctgat gcaggttatg cctgccaccg cgcgcgaaat cgccggcaaa atcggtatgg
    24241 atgccgcaca attttacacc gccgacggca atatccgtat ggggacgtgg tatatggcgg
    24301 acaccaaacg ccgcctgcaa aacaacgaag tcctcgccac cgcaggctat aacgccggtc
    24361 ccggcagggc gcgccgatgg caggcggaca cgcccctcga aggcgcggta tatgccgaaa
    24421 ccatcccgtt ttccgaaacg cgcgactatg tcaaaaaagt gatgaccaat gccgcctact
    24481 acgccgccct cttcggcgcg ccgcacatcc cgctcaaaca gcgtatgggc attgttcctg
    24541 cacgctgacg taccgatgcc gtctgaaacc cgcccggtct ttcagacggc atttttatcc
    24601 cgaacggcat tgacggcgaa ccataaatat aagacaatcc gaaaattgtt tttcctgctt
    24661 tttcaagcag cttgacacgg cacaagccga cccgttagga ggtgatgttt ccgtcacggc
    24721 gcgtatcccg ccgccgcaag gcacagcgat acggtaaacc ttcaacaccg tctgccctac
    24781 cctttccacc gatatgatgg gcagatgcaa caacagaatt tattaaagga aataaaatgc
    24841 ctgcaatccg cgtaaaagaa aacgaaccct ttgaagtcgc tatgcgccgt ttcaaacgcg
    24901 ccgtagaaaa aaccggcctg ctgaccgagc tgcgcgcccg cgaagcctac gaaaaaccga
    24961 ctaccgaacg caaacgcaaa aaagcggcag ccgtaaaacg cctgcaaaaa cgcctgcgca
    25021 gccaacaact gccgcccaaa atgtactaaa cgttcaagta cagattacag gtcagccctg
    25081 tgatatgagg acacaccgca agacctgctc tgcggtgtgt tttgcttttc agacggcatc
    25141 gaaacccgcc gtttccatcc gacatcccag cgagaacatt atgagcctga aaatccgcct
    25201 taccgaagac atgaaaaccg cgatgcgcgc caaagaccaa gtttccctcg gcaccatccg
    25261 cctcatcaac gccgccgtca aacagtttga agtggacgaa cgcaccgaag ccgacgatgc
    25321 caaaatcacc gccatcctga ccaaaatggt caaacagcgc aaagacagcg tgaaaatcta
    25381 cactgaagcc ggccgtcagg atttggcaga caaagaaaac gccgaaatcg aggtactgca
    25441 ccgctacctg ccgcaaatgc tctccgccgg cgaaatccgt actgcggtcg atgccgccgt
    25501 tgccgaaacc ggcgcggcag gtatggcgga tatgggcaaa gtgatgggcg tattgaaaac
    25561 ccgacttgcc ggcaaagccg atatgggcga agtcaacaaa atcctgaaag ccgtgctgac
    25621 cgcctgattg cccgaatatc ggacaaaatg ccgtctgaag cccgtatcgc aggttcagac
    25681 agcattttca atgtcccaat atcgaatcgg caggggcaac acggtttcaa tacgccgaaa
    25741 caggttttgc cgataaacgg attccgtttg cgccccatcg gacaaaatgc cgtctgaaac
    25801 acgattccgt tcagacggca tagatttatt tgaccaattt caagcctttt ttggcgggtc
    25861 ggggcgcggt ttcggcagag gtgttttcag gcggcgtgtc ggggcggtac tcctccaatt
    25921 caaaccccat accttcgccg gtctcccgtg cgaaaaggct gaggacgtgt ccgacaggta
    25981 tccatatgtc gtgcgcctgt ccgccgaaac gggcggaaaa gctgatccaa tcgttgtcga
    26041 tttgaaggtt ttgcgtggcg gtcgcaccga tgttgagcat aatttcattg tcgcggacat
    26101 actgcatggg gacgcgcgtg tgttcgttga cccaaacaag gatgtgcggt gtgaggctgt
    26161 tgtcgctgca ccattcgcag agagcgcgga ggacgtaggg tttggttgag gtgggcatga
    26221 tgggttccgt gttgtacgcc aaaataggaa aatgcctgca aaacggtggg ttttgcaagc
    26281 atttcggact tatttgcgca tggctttttc ggcgggtgtc agtgcttcga taaaggcttc
    26341 gcgctggaag atgcgctcgg cgtatttgag cagcggcgcg gcacttttgc ccagtttgac
    26401 atcgtagtgg tcgagccgcc acagcagcgg agcaagggcg acatcaatca tagaaaaatc
    26461 ttcgccgagg atgtatttgc ttttgctgaa cgaaggggca agcatggtca gaccgttgcc
    26521 gatggcttcg cgcgcttttg cctgttcctt gttggtggcg gcggggtttt ccaaaacttg
    26581 gacgtggttg aacaattctt tttccatacg gtacagcacc agccggcccc tgccgcgcat
    26641 aacgggatca ccgggcataa gctgcggatg ggggaagcgt tcgtcgatgt attcgttgat
    26701 gatgttggac tcgtgcagca ccaaatcgcg ctcgaccagc acgggaactt ggttatacgg
    26761 gttcatgacg gcgaggtctt cgggcttgtt gtaaatatcg acgtctttga tttcaaaatc
    26821 catgcctttt tcgtacaaaa cgaagcggca gcggtggctg aaggggcagg taatgccgga
    26881 atagagggtc atcataataa ttgtcgctcc tgtgtgatgc ctgtaaaacg gctgatttat
    26941 aaaggtttaa tcgcgcaatt atacgcgatt tccggcactt aatccagaaa ttcggctcaa
    27001 tctgttgttt tttatatatt ttccccgatt ttccgtatca gtgcgaactt actgtctttg
    27061 ttgcgcggac gcgcaccctg ccaaaccgtc tgccagcctt gcggcgcatc cgcattttgg
    27121 ggcaggagga cgatgcggta gcggcattgt acatcgccga cgcggtgcgg caatgtgccg
    27181 tactgcgtcc aaacaatccg cgtgtgcagg tcgccgccgc ctatgccgat acactcgatg
    27241 ccgtctgaaa gctcccgttt taattccggg gaaagcgatg cctccatact ccggacgacc
    27301 ggcgcgtggc ttttcgccgc gtccagccac ggcaggaaca gcgtcatcag caaagcccag
    27361 gtcagggtaa cgcctgccgc ccagttggta accgcctgcc tgccgcgtat gtttttgcgg
    27421 gtaatcgccc acagccacaa gggtgtgaac agtacggcaa ccgccatcgg aatgggatcg
    27481 atgtcgggaa cgtaatacgg gctgaagtag gcggcgcgtt cggcaagctt ggcgggccag
    27541 ccgtaattca tggcgaaaaa gcccgtccac aggaacacgg caaacagtcc gaacgccata
    27601 atgccgaacc agttgacaaa cgccgccgcg ccgcgcctca ggctgtccag ttgcgccgcg
    27661 ccgaacaggg caagcggcgg aagcagccag acgaggttat cctgaaaacg ctgcggattg
    27721 acggcaagca gcaccaaaac ggcaagcatc cacacaatgc ccaaaatccc ccagtcggtc
    27781 gaaaacaggc gcgtgcggca aaccgtccaa accgccagcg gcagcgcagg caatgcaaac
    27841 caaagcaggt ttttcagata gtaaaacaaa ctgaatgccg tctgaacgtg ccgcacgccg
    27901 ccgaacgtac cgaaaacgtg atcgtcgagc cattgcgcga acagcgcggg ctgcgttttt
    27961 gccaagagca gcgggtaaac ggtcataagc ggcagggcaa aggcaagtga ggcgactgcc
    28021 gtcaacatca aacgcctgct ttgccacgga cggaaaaaca tcagtacggg caagggcagc
    28081 atcagggcaa atgctgccgg ataagctgct gccaacgaca tcagcgtcca gcccgtaccg
    28141 agcagaaaag aggcggcaat cacgcgccgg cgagccaaag aataaccgtg cagcaccagt
    28201 ccggcggcgg caaaggcggc ggcagtgggg ttgaggaaat gggcaactgg aatcagcccg
    28261 atacagccga tgagaatcag gacgacgctg cgcccgtggt gtctgcccaa aaagttgaaa
    28321 ccggcaaagc cgcaggaagt cagtccgaca acggcgaaaa acacgccggc aaagcgtgcg
    28381 gcatcatacg ggtcggctgc ccacggcgac agcaaatgtt tgaacgcggc ggcaacccaa
    28441 agatacacgg gcggtatgcc gaaatcggtt tgaccgaaca gatgggcaac caaaggggtg
    28501 gggctgcctg ccagtgcttc gacggcggta tagacggcag gttcggcagg attccacaaa
    28561 tcgtgggaaa acacgccggg ccacaaccag gcaaacgcca tcaacagcag cagccacggc
    28621 ttttcgtggg ttttggcggg cgggcgggca tcgggcggag tgtaggtcag cataagcgtg
    28681 agaagaaatg gacggattgc caagtgtagc aaatattcgc acaaaggtcg tgcagagact
    28741 gcttcagacg gcatcagaca caaaaagacc ggcaacaaaa aagactgcac atggcagtct
    28801 ttgcagatac tatctttttc ataatatttt ttcctggccc gacacagtcc atagcatatc
    28861 aaaactgttg ttttcaatca ggatatatac ccccaatccc aaataaacaa cagcaacaaa
    28921 ccatctgcta tatttttcca aagtttctcc aacagaaggg acttgtgcta atttttgggc
    28981 agaaaaaacc aagagataaa tcatgactag aaaggtaagt aaagccacta tcaaattcgc
    29041 taaatttaag gtagtaaaat atggaacaaa gacaccaata ttgtcagcac cacaacttgc
    29101 aaaagtaatc atagcgacta gaaaaatcag gtttttatta tctttgcgca aaccctcttt
    29161 ggcaatagcc tctccatcag aatctcctaa cagcaaaact ttgatgccta ggaaaattgg
    29221 aatcaagccg agcaaaccta aaatctcttt actaggaata taatctaaga caaatgcaaa
    29281 aagcaaactt agcaatatca ggctaacaga gcctagaaat tgtcctaaat agatgttaat
    29341 gatgtctttt ctgctttttc ttttggcaaa aaataacatt aggataataa gtaagtctac
    29401 ggctgtccca gaatacagga ttattgaagt aacaacattt tgaatcataa aacatctcat
    29461 tcaaatatat ttttttaatg tattcaaaca ttaaactttg tagatgtcaa cttcaacccc
    29521 atcaaaatat ag
//
LOCUS       DBBZYD010000011        29055 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.011, whole genome shotgun sequence.
ACCESSION   DBBZYD010000011 DBBZYD010000000
VERSION     DBBZYD010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29055
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.011"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            662..1174
                     /locus_tag="ACJJDL_000427"
     CDS             662..1174
                     /locus_tag="ACJJDL_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HGG7573205.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            1254..2333
                     /gene="aroB"
                     /locus_tag="ACJJDL_000428"
     CDS             1254..2333
                     /gene="aroB"
                     /locus_tag="ACJJDL_000428"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HGG7573206.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
     gene            3300..4142
                     /locus_tag="ACJJDL_000429"
     CDS             3300..4142
                     /locus_tag="ACJJDL_000429"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HGG7573207.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     NDRVAVIATLPLTRDESWSQLAVNELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            4171..4635
                     /locus_tag="ACJJDL_000430"
     CDS             4171..4635
                     /locus_tag="ACJJDL_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HGG7573208.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETA
                     ELKMPAVIGTDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSTELADMVLKELLEHNTEAAVRFAALHKRFDNPSDFASWLAQAVKTDRKA"
     gene            4668..5777
                     /gene="ribD"
                     /locus_tag="ACJJDL_000431"
     CDS             4668..5777
                     /gene="ribD"
                     /locus_tag="ACJJDL_000431"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HGG7573209.1"
                     /translation="MFSDTDISMMEIALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLAMLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPQLNVRDFPTLRQP
                     ARIVLDSRLRLPPYSHLVTDGQSPTLIATLERDEDKLRPYREHAHIRILMPSETADSK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAENLADEIVLYRSPKILGSGKDLLSLP
                     ENRAALSAPPLWTPVSTEILGHDIKTVFRKNDNAF"
     gene            5972..7390
                     /locus_tag="ACJJDL_000432"
     CDS             5972..7390
                     /locus_tag="ACJJDL_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HGG7573210.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSSQLVSKLAILLLLLTV
                     GLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIPI
                     ALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRA
                     IEENAPPARLSATAEFAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPL
                     FCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACATSFWL
                     FFAFKTESSCRLWQPLKRLPLYTHTLLCLTSSAAYTCFGTPANYPLFAGVWAAYLAGC
                     ILRHRKDLHKLFHYLKKQGFPL"
     gene            7387..8459
                     /locus_tag="ACJJDL_000433"
                     /pseudo
     CDS             7387..8459
                     /locus_tag="ACJJDL_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            8479..9646
                     /gene="pglH"
                     /locus_tag="ACJJDL_000434"
                     /pseudo
     CDS             8479..9646
                     /gene="pglH"
                     /locus_tag="ACJJDL_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminyl-a1,3-N,
                     N'-diacetylbacillosaminyl-a1-diphospho-di-trans,
                     octa-cis-undecaprenol synthase PglH"
     gene            9639..10166
                     /locus_tag="ACJJDL_000435"
                     /pseudo
     CDS             9639..10166
                     /locus_tag="ACJJDL_000435"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
     gene            10215..11216
                     /locus_tag="ACJJDL_000436"
     CDS             10215..11216
                     /locus_tag="ACJJDL_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HGG7573211.1"
                     /translation="MPYFTGNQTNEKNNILILSAGRRVELVQDFQTEAARFSDGISVF
                     ATDLNPRMSSACHVSDGSFEVPPISTDSYIDSIFNLAVRENIGLIIPTIDTELQKLAD
                     ERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPY
                     DGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAI
                     PRKRLEVRSGEISKGVTCKNSLYQTLLEKMAVLQGARGCITAQFFYNEETGEFYGVEI
                     NPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND"
     gene            11203..11889
                     /locus_tag="ACJJDL_000437"
     CDS             11203..11889
                     /locus_tag="ACJJDL_000437"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7573212.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDGKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSLQ
                     DLVPIIDSNT"
     gene            11937..12131
                     /locus_tag="ACJJDL_000438"
     CDS             11937..12131
                     /locus_tag="ACJJDL_000438"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573213.1"
                     /translation="MTKYYSWGVNGFPPYVFDTIWKRWKLNGRGGGYRVRHPGRHDRR
                     GQSGKAAAAQKPRDRDGISD"
     gene            12255..13430
                     /locus_tag="ACJJDL_000439"
     CDS             12255..13430
                     /locus_tag="ACJJDL_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HGG7573214.1"
                     /translation="MLNTSLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECRKFEKEF
                     AAFAGTRYAVALSNGTLALDVALKAMGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAIIVVHLAGMPAEMDGIMALAKEHNLWVVEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKELWSKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTVCRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVNELNARKVPCYQGSCSEV
                     YLEKSFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKEHIEAVLTEATR"
     gene            13478..15388
                     /gene="pglD"
                     /locus_tag="ACJJDL_000440"
     CDS             13478..15388
                     /gene="pglD"
                     /locus_tag="ACJJDL_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HGG7573215.1"
                     /translation="MTLETLLALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGQAGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATTSGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPAFEKQIAEGGPITLTHQDITRYFMTIPEAAQLVIQAGAMGKGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADEAMLPWHELSVLLDRIRAACDRYDQQAIRTLLINAPTGFTPSDGICDL
                     LWVRETHRKNAV"
     gene            15444..16736
                     /locus_tag="ACJJDL_000441"
     CDS             15444..16736
                     /locus_tag="ACJJDL_000441"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HGG7573216.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     AEVNAVFADVFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFNLSDGTSAEKAILLPLAPEYIGYADVHVEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDSEMARLD
                     ALAQEHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTR
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(16788..17624)
                     /locus_tag="ACJJDL_000442"
     CDS             complement(16788..17624)
                     /locus_tag="ACJJDL_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HGG7573217.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYAFLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFS
                     RH"
     gene            complement(18020..18223)
                     /locus_tag="ACJJDL_000443"
     CDS             complement(18020..18223)
                     /locus_tag="ACJJDL_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HGG7573218.1"
                     /translation="MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(18201..18434)
                     /locus_tag="ACJJDL_000444"
     CDS             complement(18201..18434)
                     /locus_tag="ACJJDL_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG7573219.1"
                     /translation="MEAIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            18972..22406
                     /gene="dnaE"
                     /locus_tag="ACJJDL_000445"
     CDS             18972..22406
                     /gene="dnaE"
                     /locus_tag="ACJJDL_000445"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HGG7573220.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPVGAADVWIGNPNAPDKPFRAMLIIRNDAGYQRLSELLT
                     EAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGMNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPDQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQVAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDLPRWSESEKLAEEKTVIGFYLSGHPFGPYAQEVCQIAPTKLDR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGSQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLS
                     SHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            22684..25932
                     /gene="cas9"
                     /locus_tag="ACJJDL_000446"
                     /gene_synonym="csn1"
     CDS             22684..25932
                     /gene="cas9"
                     /locus_tag="ACJJDL_000446"
                     /gene_synonym="csn1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HGG7573221.1"
                     /translation="MAAFKPNPINYILGLDIGIASVGWAMVEIDEEENPIRLIDLGVR
                     VFERAEVPKTGDSLAMARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGL
                     IKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLK
                     GVANNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELILLFEK
                     QKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPAEPKAAKNTYTAER
                     FIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYAQARKLLGLEDTAFFKG
                     LRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSSELQDEIGTAFSLFKTD
                     EDITGRLKDRVQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYG
                     DHYGKKNTEEKIYLPPIPADKIRNPVVLRALSQARKVINGVVRRYGSPARIHIETARE
                     VGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKC
                     LYSGKEINLVRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFN
                     GKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEDGFKECNLNDTRYVNRFLCQFVA
                     DHILLTGKGKRRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQK
                     ITRFVRYKEMNAFDGKTIDKETGKVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFE
                     EADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGAHKDTLRSAKRFVKHN
                     EKISVKRVWLTEIKLADLENMVNYKNGREIELYEALKARLEAYGGNAKQAFDPKDNPF
                     YKKGGQLVKAVRVEKTQESGVLLNKKNAYTIADNGDMVRVDVFCKVDKKGKNQYFIVP
                     IYAWQVAENILPDIDCKGYRIDDSYTFCFSLHKYDLIAFQKDEKSKVEFAYYINCDSS
                     NGRFYLAWHDKGSKEQQFRISTQNLVLIQKYQVNELGKEIRPCRLKKRPPVR"
     gene            25998..26912
                     /gene="cas1"
                     /locus_tag="ACJJDL_000447"
     CDS             25998..26912
                     /gene="cas1"
                     /locus_tag="ACJJDL_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA];
                     GO_process: GO:0051607 - defense response to virus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HGG7573222.1"
                     /translation="MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIEN
                     RETLITAPLLSALAEHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKK
                     QFWQHIVRQKILNQAFIADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALF
                     GEKFTRNDNNAVNAALNYTYAVLRAAVARTLTLYGWLPALGLFHRSELNPFNLADDFI
                     EPLRPLADLTVIHLYEQGRLKAELTPGIKQHLIKTLHYQISIERQHFSTLAAIDKMVS
                     SFQAGVTDKNAKQLKLPEILPLKEYRYE"
     gene            26905..27231
                     /gene="cas2"
                     /locus_tag="ACJJDL_000448"
     CDS             26905..27231
                     /gene="cas2"
                     /locus_tag="ACJJDL_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HGG7573223.1"
                     /translation="MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLS
                     VYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNS
                     DQLLLF"
     repeat_region   27295..28518
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=27295..27330
                     /rpt_unit_seq="attgtagcactgcgaaatgagaatgggagctacaac"
     gene            28958..>29055
                     /locus_tag="ACJJDL_000449"
     CDS             28958..>29055
                     /locus_tag="ACJJDL_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7573224.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQP"
BASE COUNT         7292 a         8413 c         7130 g         6220 t
ORIGIN      
        1 aacccaaaac ggcaacttaa aaccccgtca ttcccgcgca ggcgggaatc taggtctgtc
       61 ggttcaggac cttatcggat aaaacggttt ctccaaccct gcgttctaga ttcccacttt
      121 cgtgggaatg acgggatatg ggtttccgtg cggacgtgtt cggatttccg cctgcgcggg
      181 aatgacggcg acagatgccc aacggtcttt atagtggatt aacaaaaatc aggacaaggc
      241 gacgaagccg cagacagtac aaatagtacg gaaccgattc acttggtgtt tcagcacctt
      301 agagaatcgt tctctttgag ctaaggcgag gcaacgctgt actggttttt gttaatccac
      361 tatagtattg ataaacatat tatcttcaat atattcaatt ggataattgt ttacctaagc
      421 aaagataatt gccttttcct gacaaataag tgaaatcaac ggattgtcaa aacacagcct
      481 gaaataaaaa acctccctga tttcttttat ttttccttaa aatcagaaag gttcgggatg
      541 gtcgggttat ttttccaaac gtaccgctgc cctgccgatt tcgtataaaa ttccgccgta
      601 acccgacaag cccgaaccct gtcgccccga aaggcggggt gtcaaacatt aaggaattgt
      661 gatgaaaaac tttaacggca aactcatcct catcggactg atgggcgcgg gcaaaaccac
      721 gctgggccgg caaatggcgc agcggctgga ttaccgtttt tacgacagcg atcacgaaat
      781 cgccgtagcc gccggcgttc ccatccccac catatttgaa atggaaggcg aacagggatt
      841 ccgttcgcgc gaaaccgcca tactcaaaaa gctggttatc ctgccccata tcgtcctgtc
      901 caccggcggc ggcgcggtgt taaaagaaga aaaccgcgcc cttatccgca aaagcggcac
      961 ggtcgtctat ctgcacgccc cgcccgaaac cctgctcgaa cgcacgcgct gcgacaacag
     1021 ccgtcctttg ctgcaagttg ccgatccttt ggcgaaatta cgtgaactct acgccgcacg
     1081 cgaccccgtt taccgccaaa ccgccgactt taccgtagaa tcggcaaact gccgggaaac
     1141 cgtgcaaacc ctgctcaaac gcttatcccg ataaaccggc atatgcgccg cgcccagaaa
     1201 accaagccgc gccccgcccg gcgggccggc ggttcaaact ttaaggaaca acaatgaaaa
     1261 cactgaccgt acacaccccg tcccacagct accccatctt tatcggcaac gggctgctgc
     1321 cgcaggcagg aagcctgctc aaaccgcatt tgggcaaacg cgccgccatc atcgccaacg
     1381 aaaccgtcgc cccgctctac ctcggcacgc ttcagacggc attggatgcg gcaggcgtat
     1441 cccatttcag catcatcctg cccgacggcg aggcgcacaa aaactggcag acgctcaacc
     1501 tcatctttga cgggctgatg caaaaccgcg ccgaacgcaa aaccacatta atcgcactgg
     1561 gcggcggcgt gatcggcgac atggtcggct ttgccgctgc cacctaccag cgcggcgcac
     1621 cgttcgttca aataccgacc acactgttga gtcaagtcga ctcatcggtg ggcggcaaaa
     1681 ccgccatcaa ccacccgctc ggcaaaaata tgatcggcgc attctaccag ccgcaggcgg
     1741 tgcttgccga cttggacacg ctgcacaccc tgcccgtccg cgaattgtcc gccggtatgg
     1801 cggaagtcat caaatacggc gcgctcggcg acatcggttt tttcgaatgg ctcgaacaaa
     1861 acatatccgg actgatgacg ctcgatcggg aaaaactcgc ccaagccgtg taccgctgct
     1921 gccaaatgaa ggcagacatc gtcgcccaag acgaaaccga acagggcata cgcgcatggc
     1981 tcaacctcgg acacaccttc ggacacgcca ttgaaaccga gatgggttac ggcacttggc
     2041 tgcatggaga agccatcgcc gccggctgcg tgttggcggc gcgtttgtcc gaacaactgg
     2101 gcaaaacctc cgccgcagat accgcgcggc tcgccgccct gctcgaagcc gccggactgc
     2161 cgtccgcacc gcccgtgttt gcctttgaaa aatggctcga acatatgagc cacgataaaa
     2221 aagtcagcgg cggcatcatg cgctttatcg gtctgaaccg gctgggcgaa gccaacatca
     2281 ccgaaattac cgacacggac atcctccgcc gcaccctgca accgtatctc tgatttcctc
     2341 tgccgatgtg ctgccgcgcg ggtttgacgc acgatgatga ttttccatca tctttctccg
     2401 taaaagcggg aatccggtcc gttcggtttc ggtcgtttcc gataaattcc tgctgctttt
     2461 catttctaga ttcccacttt cgtgggaatg acggcggaga ggtttttgtt gtttcggaga
     2521 agtttctgca accctagaat ctcgttattt ccacaaaaaa cagaaaccca aaacagcaac
     2581 ttaaaacctc gtcattcccg caaaagcggg aatccggtcc attcagtttc ggtcgtttcc
     2641 gataaattcc tgctgctttt catttctaga ttcccacttt cgtgagaatg acggcggaag
     2701 ggttttggtt ttttccgata aattcttgag gcattgaaat tctatagtgg attcacaaaa
     2761 atcaggacaa ggcgacgaag ccgcagacaa tacagatggt acggaaccga ttcactcgtg
     2821 cttcagcacc ttagagaatc gttctctttg agctaaggcg agacaacgcc gtaccggttt
     2881 ttgttaatcc actataacag caaccctgtc gccgtcattc ccgcaaaagc gggaatccag
     2941 tccgttcggt ttcggtcgtt tccgataagt tcccgttgct tttcatttct agattcccac
     3001 tttcgtggga atgacggcgg aagggttttg gttttttccg ataaattctt gaggcattga
     3061 aattccagat tcccgcctgc gcgggaatga cggctcaaaa gttacggaac gaaaaacaac
     3121 caaaaccgga caagtcggat tcccgcctgc gcgggaatga cggaatctta agtttccgtc
     3181 tttgttttct gttttctgtt ttcgagggaa taacggggaa caagccgtat ttcagacggc
     3241 attttcagtt cggggtataa tccgaatact tgcgaccatc tgaatcattg ggacaaacca
     3301 tgtgtcaact gctgggcatg aactgcaata cgccgaccga tattatgttt tcctttgaag
     3361 gcttccgccg caggggcggc attaccgacc accatgccga cggtttcggc atcggctttt
     3421 tcgaaggcaa aggcgtgcgc ctgttccatg acgacaaacc cagtgccaat tcgcccgtcg
     3481 ccgacctcgt gcgcgcctac cagattaaat cggaaaacgt cgtcgcccat atccgcaaag
     3541 catcacaagg acaaacctcg ctggcgaaca cccatccctt tatgcgcgaa atgtggggcg
     3601 gctactggct gtttgcccac aacggacatt tgattgattt ttttcccgaa cagggcgaat
     3661 ttttccaccc cgtcggcaca accgattccg aacgcgcgtt ctgccacatc ctcaaccgcc
     3721 tgcgcacccg ctttgccgcc cgtcccgacg acgacacgct gtttgacgcg attgcggggc
     3781 tgacgcacga aatccgcaag ttcgggctgt ttaactttat gctttcagac ggcattgccc
     3841 tgtttgccca cgccagcaca ctactgcact acatcgtccg ccaagccccg ttcggcaagg
     3901 cgcgcctgct cgacgacgac gtgatggtcg attttgccga agtaaccacg cccaacgacc
     3961 gcgtcgccgt tatcgccacc ctgccgctga cccgcgacga atcatggtcc caacttgccg
     4021 tgaacgaact ggtcatgttc cgcgaaggca acatcgtccg acacgaccgt cccgaaaacc
     4081 ccgtctatat gagtgccgaa gaaggtctgg aaatcgcccg cgccgccggc gtatcggttt
     4141 gacgttcaga cggcatcagg aagaaacgct atgaaatgcc cgttttgcgc ccaccccgac
     4201 acccgcgtcg ccgattcgcg tctgatggaa gaacgcaacg ccgtgcgccg ccgccgccac
     4261 tgccccaact gcggcaaacg cttcggcacg ctcgaaaccg ccgaactcaa aatgcccgcc
     4321 gtcatcggca cggacaaaaa acgctcgccc tttaatgcac aacgcctccg caacgacctg
     4381 accgccgccg cccgaaaatc cgccctgaca cccgaacaga tcgacgaaac cgtccgcctg
     4441 acggaacaca ggctctacac ttcgggtcag cgcgacatcc cctccaccga acttgccgac
     4501 atggtgctaa aagagctgct tgagcacaac acggaagccg ccgtccgctt cgccgccctg
     4561 cacaaacgct tcgacaatcc gtcagacttt gcctcgtggc tggcgcaagc cgtcaaaaca
     4621 gaccgcaaag cctgattctc cccaacccat actgatacgg tatccctatg ttttcggaca
     4681 cagatatatc catgatggaa atcgccctcc gacttgccgc tttgggacgt ttttccactt
     4741 cgcccaatcc gcgcgtcggc tgcgttatcg cacacggcag ccaaattgtc gggcaaggct
     4801 tccacgtcaa agcgggcgaa ccgcacgccg aagtccacgc cctgcgtcag gcgggcgaaa
     4861 tggcacaagg cgcgaccgcc tttgttaccc tcgaaccgtg cagccattac gggcgtaccc
     4921 cgccctgcgc cgaagctctg ctccgttccg gcgtaacacg cgtcgttgcc gccatgcgcg
     4981 accccaaccc gctggttgcc ggcaaagggc ttgccatgct cgaagcagca ggcatcaaga
     5041 cggaatgcgg tttactcgaa catcaggcaa gggaactcaa ccgaggcttc ctgtcgcgca
     5101 tcgaacgccg ccgccccttc gtccgcctca aatgcgccgt ttcgctggac ggcaaaaccg
     5161 ccctttcaga cggcagcagc ttttggatta ccggcgaaga cgcgcgtgcc gacgtacagg
     5221 ttttgcgtgc cgaaagctgc gcggtgctga ccggcatcgg cacggtgttg gcggacaatc
     5281 cccaactcaa cgtccgcgac ttcccaaccc tgcgccaacc cgcgcgcatc gtgttagaca
     5341 gccgcctgcg cctgcccccg tacagccatt tggttaccga cggacaatct ccgaccctta
     5401 tcgccacctt ggaacgcgat gaagacaaac tccgccccta tcgggaacac gcacacatcc
     5461 gtatcctgat gccgtctgaa acggcagaca gcaaaatcga cctgcaccac ctgatgcgcc
     5521 tccttgctga cgaaggtttc ggcgaaatca tggtcgaagc aggctccgaa ctcacatccg
     5581 catttttggc agaaaatctg gcagacgaaa tcgtcctgta ccgttcgccc aaaatcctcg
     5641 gcagcggcaa agacctgctt tccctgcccg aaaaccgcgc cgccctttcc gcaccgccct
     5701 tgtggacacc cgtttccacc gaaatcctcg gacacgacat caaaaccgtg ttccggaaaa
     5761 acgataacgc cttttaaagg gtttgcgccg tttcactata taataacgcc gataaaaaac
     5821 ggccccgttc agaccgccgc ccgcccggaa aagcgcaacc cggactgccg caccccgccg
     5881 gcagccgcaa cggactgaaa gccgtcaaat tccgatcaag aaaggcttca gacggcacag
     5941 gcagcatccc gccgccgccc ggacatcaaa aatggacaca aaagaaatcc tcggctacgc
     6001 ggcaggctcg atcggcagcg cggttttagc cgtcatcatc ctgccgctgc tgtcgtggta
     6061 tttccctgcc gacgacatcg ggcgcatcgt gctgatgcag acggcggcgg gactgacggt
     6121 gtcggtattg tgcctcgggc tggatcaggc atacgtccgc gaatactatg ccgccgccga
     6181 caaagacact ttgttcaaaa ccctgttcct gccgccgctg ctgtctgccg ccgcgatagc
     6241 cgccctgctg ctttcccgcc cgtccctgcc gtctgaaatc ctgttttcgc tcgacgatgc
     6301 cgccgccggc atcgggctgg tgctgtttga actgagcttc ctgcccatcc gctttctctt
     6361 actggttttg cgtatggaag gacgcgccct tgccttttcg tcctcgcaac tcgtgtccaa
     6421 gctcgccatc ctgctgctgc tgctgacggt cgggctgctg cactttccgg cgaacaccgc
     6481 cgtcctgacc gccgtttacg cgctggcaaa ccttgccgcc gccgcctttt tgctgtttca
     6541 aaaccgatgc cgtctgaagg ccgtccggcg cgcaccgttt tcatccgccg tcctgcatcg
     6601 cggcctgcgc tacggcatac cgatcgcact aagcagcatc gcctattggg ggctggcatc
     6661 cgccgaccgt ttgttcctga aaaaatatgc cggcctagaa cagctcggcg tttattcgat
     6721 gggtatttcg ttcggcgggg cggcattatt gttccaaagc atcttttcaa cggtctggac
     6781 accgtatatt ttccgcgcaa tcgaagaaaa cgccccgccc gcccgtctct cagcaacggc
     6841 agaattcgcc gccgccctgc ttgcctccgc cctctgcctg accggcattt tctcgcccct
     6901 cgcctccctc ctgctgccgg aaaactacgc cgccgtccgg tttatcgtcg tatcgtgtat
     6961 gctgcctccg ctgttttgca cgctggtaga aatcagcggc atcggtttga acgtcgtccg
     7021 aaaaacacgc ccgatcgcgc tcgccacctt gggcgcgctg gcggcaaacc tgctgctgct
     7081 ggggcttgcc gtaccgtccg gcggcgcgcg cggcgcggcg gttgcctgtg ccacctcatt
     7141 ctggttgttt tttgccttca agaccgaaag ctcctgccgc ctgtggcagc cgctcaaacg
     7201 cctgccgctt tatacgcaca cattgctctg cctgacctcc tcggcggcct acacctgctt
     7261 cggcacaccg gcaaactacc ccctgtttgc cggcgtatgg gcggcatatc tggcaggctg
     7321 catcctgcgc caccggaaag atttgcacaa actgtttcat tatttgaaaa aacaaggttt
     7381 cccattatga aaatcgtttt gaccacatct atggcaggct tgggcggcac ggaaaccgcc
     7441 accgtccgcc tcggcaggct actcaggcag cacggacacg acatcatgct tgcctcttcg
     7501 gacggaccgt tgctcaaaga ggcgcaagcc ttgggcatac gttggcaacc cgtcgatttc
     7561 tatcgcggcg gccttttcgg ctacctcaaa ggtatgattg cctacgcccg aatgctgcgg
     7621 cgcgaacaac ccgacatcat cgactgccaa atggcgcgcg tcgtacccgc ctgcgccatt
     7681 gccgccaaaa tcgtttcgcc gaaaaccaaa atcatctacc actcgcacgg tttggacgcg
     7741 gcaacctacc ccaaaatcgc caaactcttc gacaagctgg gcgtgtacat catcggtaac
     7801 tgcaaacacg aacgcgaaaa actcatccgc cacggtttcc ccgccgaccg gattgtctac
     7861 gcctacaacg cactcccccc cccccggaat ttcctttctg gaaaaccgtc aaaggctgcg
     7921 tcatgctcgg cacgctgtcg cgtctggaca ccgtccgcgc cgtgcatctg atgctggaca
     7981 ttttcaaaaa aatggtcgac cgcgatatgc ccgtacgcct gaacgtggcg ggcataggcg
     8041 aagaaatgga caatttgaaa gcgcaggcgg aacgtctggg catagacggc aaagttacct
     8101 tcctcggcgg cgtgcgcgat ttgaccgcct acttcaaaga cgtggatatt ttggtgaaca
     8161 cgccccactg catcggcgac cacggcgcag gtgtgggcaa caacatctta gaagccggac
     8221 tttacgacac acccgtcgtt acctacgata tggcgggcat ttccgaaatg gtcgtcaacg
     8281 gggaaacggg ttactgcatc cccttcggcg acgaagaagc ctttatcgcc gccgtagaca
     8341 cgctcgtcag acaaccgctg ttgcgcgaag caatgggcaa aaggctgcac gcacacgtcg
     8401 ccgcactctg ttccgacgac gaaatctacc gtaccaccat ggcggcctat accatgtaat
     8461 gccgtctgaa agccgccgat gaacatcacc atagtcgccc cttattgctc gctgccgtcc
     8521 gaaccgtatt tcaaccgctt ttggtatctg gcagaacgat tgtcgcaatc gcacgacgtg
     8581 ttgctgatta ccagccgttt ccgccactac gacaaatcat tcagacggca tgaagatgct
     8641 gccgccactt caaacggcag gctgcgcgtc aagctgctgg acgaacctgg ctaccgaaaa
     8701 aacgtctccc tcgcccgcgt cgccagccac cgcgtattcg tccgcaattt ggcacgctgg
     8761 ctgcacagcc cgcaggcggc ggaacaggac atcgtctatt ctgcctatcc gctgatggcg
     8821 accaacctgc tgttgggcaa acacaaagcg cgtttgggct acaaactgat tgtcgatgtg
     8881 caggacgtat ggccggagtc tttctcctcg gtcgtaccat ttttgaaaaa agtaccgcac
     8941 aagctgctgc cctttgcttc acgcgccaac cgtgcctacc gctgcgccga cgcgctggtt
     9001 gccgtatcgc agacttatct cgaccgcgcc aaagaagcca atccgaacgt acccggcgaa
     9061 gccgtctata tcggtacgga ttttgccgcc atcgcccccc cccccgcgat tccgctccaa
     9121 aaccacccgc cttttctact tgggaacgct cagttacagc tacgacgtgg aaaccgtgtg
     9181 caaaggtgtt cggaaacttt tagacgacgg cgaaaacgtc gaattgcaca ttatgggcgg
     9241 aggacccgat ttggagaaac tcaaacaata tgaaaatcgc gccatcaagt tttacggtta
     9301 tttaccctat tctgaaatga tgtcgattgc caaaggctgc gacattgccg tcaacgccat
     9361 ccatagccac gccatgcagt cggttaccaa caaactctcc gactatatgg ctttgcaaaa
     9421 accgattctg aacagccaga ccaatgccga agtccttagc ctcttgaacc tgctgccgca
     9481 cgaaaactac cgttccggcg acgtggacag cttcgttcaa gccgccaaag atattttgaa
     9541 acgcaaaaac gaccccgttc agtccgatga aatcgtccgc cgcttcaggc gcgacatttc
     9601 ctatcggaaa atcgtcaacc tgattgaaag attggcaaat gagtaaagcc gtcaaacgcc
     9661 tgttcgacat catcgcatcc gcatcggggc tgattgtcct ctcacccgtt ttcctgattt
     9721 tggcgtacct catccgcaag aatctgggtt cgcccgtctt cttcattcaa gaacgccccg
     9781 gaaaggacgg aaaacctttt aaaatggtca aattccgttc catgcgcgac gcgcttgatt
     9841 cagacggcat tccgctgccc gacagcgagc ggctcacacc cttcggcaaa aaactgcgtg
     9901 ccgctagttt ggacgaactg cctgaattat ggaatgtctt aaaaggcgac atgagcctgg
     9961 tcggcccgcg cccgctgctg atgcaatatc tgccgctgta cgacaacttc caaaaccgcc
    10021 gccacgaaat gaaacccggc attaccggct gggcgcaggt caacgggcgc aacgcgcttt
    10081 cgtgggacga aaaattcgcc tgcgatgttt ggtatatcga ccattacagt ttttggctgg
    10141 atatgaaaat cctgtttttg acagtcagaa aagtctttat caaagaaggg atttcggcgg
    10201 aaggggaagc cactatgcct tatttcactg gaaatcaaac taatgaaaaa aataatatac
    10261 tgattctgtc ggcaggtcgc cgtgtcgaat tggtgcagga cttccaaacc gaagccgcac
    10321 gtttttcaga cggcatcagc gtttttgcca ctgacctcaa cccccgcatg tcttctgcct
    10381 gccatgtttc ggacggttca tttgaagtgc cgccgattag taccgattca tatatcgaca
    10441 gcattttcaa tctggcggta cgcgaaaata tcggtttaat catcccaacc atagacaccg
    10501 aactgcaaaa gctggcagac gagcgcgaac gctttgaagc ggcaagtgtc cacatcgtcg
    10561 tttccgattc ggacttcatc gcacaatgcc gcgacaaacg gaaaaccgcc accttgtttg
    10621 cccgctacgg catacgctca cccgaaattt acgaccgcaa gaagttggtt ttcccttgct
    10681 tcgccaagcc ttatgacggc agccgcgcca tcggtgcaaa acggattgac acacctgccg
    10741 acctgacacc ggaagtcttg gcagacacca aattaatgtt ctgtcagttt atcgacatcg
    10801 aaaataaatt ttccgagttt accgtcgata tgtattacga ccgtcaatgc cgtctgaaat
    10861 gcgccatccc gcgaaaacgc ttggaagtgc gctccggcga aatcagcaaa ggcgttacct
    10921 gcaaaaacag cctctaccaa acgctgctgg aaaaaatggc ggtattgcag ggcgcgcgcg
    10981 gctgtatcac ggcgcagttc ttctacaacg aagaaaccgg cgaattctac ggcgtggaaa
    11041 tcaacccccg cttcggcggt ggcttcccgc tgacgtatgc cgcaggcggc aattatccga
    11101 gccggttgat gcgcgaatac ctcggcgacg aagaaatccc gttttcagac gactgggaaa
    11161 acaacctcat tatgttgcgc tacgatgcca aggtcttggt tcatgaaaac gattaatcct
    11221 gaaaccaccg tcatcgtctt cgacttggac gataccctgt attcggaata cgaatacaag
    11281 ctctccggta tccgttcggt catcgatacc gttgccgcac tgtatcccga ttggaattca
    11341 gacaacctat ggcgcaacat cgaccccgac ggcaaagatt ggctggacaa attgtgccgc
    11401 cactgtggtt ttaatgaatc ggaaaaacag gttcttttgt ggcaataccg gctgcaccgc
    11461 ccgacgctga ctccgtatgc tccgccggat ttcctgtccg aactgaccgc gcccttcgcc
    11521 gcacgcgcgc tgattaccga cggaagaagc ctgacccaac gcctgaagct ggaagccttg
    11581 ggtctgtctt ccctgtttga cgacatcctc atctctgaag cctgctcttc ggaaaagccc
    11641 gacggcaaac gcttccgcca tcttcaagac aaatatgccg acaaggcagg ctgcttcatc
    11701 tatatcggcg acaacatttc caaagacttt atcgcgccga acactttggg ctggataacc
    11761 ataggattgc ttccctccgg acagaacatc caccgccacc agcctgaaag ttttaacaca
    11821 gaatatcatc ccgacttttg ggttaactcc cttcaagatt tagttcctat aattgattca
    11881 aatacttaac cattacataa tcaaacatgc actcacaata ttaaaaggac tatttcatga
    11941 caaaatatta ttcatggggc gtaaacggct ttccgcccta cgttttcgac accatttgga
    12001 aacgatggaa gttgaatggg cgcgggggcg gttatcgtgt gcgacatccc ggacggcatg
    12061 accgtcgcgg gcaatccggc aaagccgctg ccgcgcaaaa accccgagac cgcgacggca
    12121 taagcgatta aaatacaccc ccgtacagac cgattttggc aacacctgcg gcgcgcgccc
    12181 gattcttcgg aacacgcccc cttcagacgg catagagtca gaaatgccgt ctgaaaaccg
    12241 acggaccaaa caccatgctg aacacctccc tttccccgtg gccctgcttc acccaagaag
    12301 aagccgatgc cgtttccaaa gtcctgctgt ccaacaaagt caactactgg acgggaaacg
    12361 aatgccgcaa atttgaaaaa gaattcgccg cctttgccgg cacgcggtac gccgtcgccc
    12421 tttccaacgg cacgctggca ctcgatgtcg cgctcaaagc aatgggcata ggcgcgggcg
    12481 acgatgtgat tgttacctcg cgcactttcc tggcttccgc atcctgcatt gtgaacgcgg
    12541 gcgcaaatcc ggtgtttgcc gatgtggatt tgaacagcca aaacatcagc gcggaaaccg
    12601 tcaaagccgt gctgaccccg aataccaagg cgattatcgt ggttcacctt gccggtatgc
    12661 ctgccgaaat ggatggcatt atggctttgg caaaagaaca taatctttgg gttgtcgaag
    12721 actgcgccca agcgcacggc gcgaaataca aaggcaaatc cgtcggcagc atcggacacg
    12781 tcggcgcgtg gtcgttctgc caagacaaaa tcatgaccac gggcggcgaa ggcggcatgg
    12841 ttaccaccaa cgacaaagaa ctgtggagca aaatgtggtc gtacaaagac cacggcaaaa
    12901 gctatgacgc cgtgtaccac cgcgaacacg cccctggctt ccgctggctg cacgaaagct
    12961 tcggcacaaa ctggcgtatg atggaaatgc aggcggcaat cgggcgcatt cagctcaaac
    13021 gcctgcccga atggactgtc tgccgtcaag cgcacgccgc caagctggcg gaaagcctag
    13081 gcaaattcaa aagtatccgc ttggttgaag tcgccgacta catcggacac gcgcaatata
    13141 agttctacgc cttcgtcaaa cccgaacacc tcaaagacgg ctggacgcgc gaccgcatcg
    13201 tcaacgaact gaacgcgcgc aaagtcccct gctatcaagg tagctgctcc gaagtgtatt
    13261 tggagaaatc cttcgacaac acgccttggc gtccgaaaga gcggctgaaa aatgctgtcg
    13321 agttgggcga caccagcctg atgttcttag tacatccgac gctgaccgac ggcgaaatcg
    13381 cgttctgcaa agaacacatc gaagccgtat tgaccgaagc cacacgataa cccttcagac
    13441 ggcatatgcc gcctgaaagc acataccgcc ccacgatatg actctggaaa ccctgcttgc
    13501 cctaccgcgc aacatcaaga aaatctgttt cctcatacac gattttctga tgattttcat
    13561 tgccttttgg tttacccaaa gcctgaaggc cgactactcg aacgaatggt tcgaccctgc
    13621 caactggcag tctttcctat tgaccgcgcc gttgaccatc ggcctgttcg tcagaatggg
    13681 gctctaccgt gccgttacac gcttcatcag cttccgcatc ctctccaccg cgctggcagg
    13741 cagcctcgcc tccgccgtat tgttcttcct caacacattg atttttgaag aaaggctgcg
    13801 cctcgccctg ccgattgtct atttcttact gctgtttgtt tccgtgaccg gctcgcgtat
    13861 ggttttgcgc ggactgttgt ccgaacaccc caaaaaacag atgatccccg tcatcattta
    13921 cggcgcgggg caggcgggca gacagcttct cgaggccgtc aaacaaatgc gcgaatattc
    13981 cgccgccgcc tttgtggacg acgaccccaa actgtggcac accgtcatct acgaccttgc
    14041 cgtttaccag cccgatgcca tcgccttcct catcgaacgc tacggcgtgg aaaaaatcct
    14101 actcgccatc cccggcgcga cccaggaaca acgccgccga atcatcaaca aactggaagc
    14161 ctatccgtgc gaagtgttga ccattcccgg aatgaaagac ctgatggacg ggaaaatcag
    14221 catcggcacg ctcaaaaaaa tctctgtgtc cgacctgctc gggcgtgatt ccgtcgcgcc
    14281 cgacaaccgc ctgatgagtg ccgacatcga aggcaaaacc gtcatggtaa ccggcgcggg
    14341 cggctccatc ggttcggaac tctgccgcca gattatccgc cgccgccccg aaaagctgct
    14401 gctgttcgag ttatccgaat tcgccctgta cgccgtcgaa aaagaattgc gcgaaacctg
    14461 catccaaaaa cgcctcgaca ccgaaatcct gccctttctc ggttcggtgc aaaaccgcac
    14521 gctgctcgaa cacgtcatga ccgccttttc cgttgcgacc gtctatcacg ccgccgccta
    14581 caaacacgtc cccatggtcg agttcaacac cgtcgaaggc atacgcaaca acatcttcgg
    14641 cacactcgag tgcgcgcttg ccgccacgac atcgggcgtg gaaactttcg tcctcatctc
    14701 caccgacaaa gccgtccgcc ccaccaacac catgggtgcc agcaaacgca tggcggaact
    14761 ctgccttcag gcgctcgccg ccgaacccgg acaaaaaacc cgcttcagca tggtgcgttt
    14821 cggcaatgtt ttaggttcgt ccggctccgt cgtccccgca tttgaaaaac aaattgccga
    14881 aggcggcccg attaccctga cccaccaaga cattacccgc tacttcatga ccattcccga
    14941 agcggcgcaa ctggttatcc aagccggcgc gatgggcaaa ggcggcgacg tattcgtcct
    15001 cgatatgggc gaatccgtca aaatcatcga ccttgcccgc caaatgatta ccttaagcgg
    15061 cctcaaaccc aaaacacccg aacaacccga cggcgacatc gaaatcctca ttaccggact
    15121 gcgtcccggc gaaaaactct acgaagagct gctcatcggc gacaacgtcc gcaaaaccgg
    15181 ccatccgcgc attatgacgg ctgacgaggc gatgctgccg tggcacgagc tctctgtcct
    15241 gctcgaccgc atccgtgcgg cctgcgaccg ttacgaccag caggcaatcc gcaccctgct
    15301 catcaacgcc ccgaccggct ttaccccaag cgacggtatc tgcgacctgc tttgggtacg
    15361 agaaacacac agaaaaaatg ccgtctgaac cttcagacgg cataacgtac aaaccaacct
    15421 accttacaca cacggagttt gacatgcagt tctcagcatt cggcgaaaaa ttcacgcaac
    15481 acagcggcat cctccaactg atggacgacc tcggcgacgc gctcaaaagc gacaagcccg
    15541 tcaatatgct cggcggcggc aatccggcgc gaatcgccga agtcaatgcc gtgttcgccg
    15601 acgtattttc caaactggca gcagaacatg ccgtcgaaaa catcggcaac tactccaatc
    15661 ctcaaggaga tgccgcgctg attgacgcgc tgaccgcctt cctcaaccgc gaatacggct
    15721 ggaacctgac cgccgacaat atcgcgctga ccaacggttc gcaaaacgcg tttttctatt
    15781 tattcaacct cttcggcggc aaattcaacc tttcagacgg cacatccgca gaaaaagcca
    15841 ttttgttgcc gctcgcgccc gaatacatcg gctatgccga cgtgcatgtc gaagggcagc
    15901 acttcgtttc cgtcaagccc aaaatcgaaa acgtcgaaca cgaaggcgaa gcaggcttct
    15961 tcaaataccg cgtggacttt gacgcactgg aaaacctgcc cgaactcaaa gcgggcaaaa
    16021 tcggcgcgat ttgctgttcg cgcccgacca acccgaccgg caacgtgctg accgacagcg
    16081 aaatggcgcg gctggacgct ttggcgcaag aacacggcat tccgctgatt atcgacaacg
    16141 cctacggaat gccgttcccc aacatcattt acagcgacgt aacgctgaat tggcatgaaa
    16201 acatcatcct ctgcttcagc ctttccaaag tcggtctgcc gggcgtgcgc accggcatca
    16261 tcgtcgccgc gcccgaagtc gtcaaagccg tcagcagcct gaacgcgatt gtgaaccttg
    16321 cccccacgcg cttcggcgcg gccatcgccg ccccgctact ggaaagcggc gagatgaaac
    16381 ggcttgccga ccaagtcatc cggccgtttt accgcaatca ggcgcaaacc gccgtctcgc
    16441 tgctcaagcg cgagctgggc gcgtacccga tgaaaatcca caaacccgaa ggcgcgattt
    16501 tcctgtggct ctggtttgaa aacctgcccg tttcttcgca aaccctgtac gaaatgctca
    16561 aagccgaagg tacgctgatt attccgggcg aacatttctt cgtcggcatc gacacgcggg
    16621 attatccgca cgcgggcgag tgcatccgta tgagcatcgc gcaggacgct caaacgctgg
    16681 aaaaaggcat tgccgccatc ggtaaaaccg tccgaaaact gtacgacaac gtttaaaccg
    16741 caaaaaatgc cgtctgaagg cctttcagac ggcattttta tccgcattca atgtcgggaa
    16801 aaatgcgccc acactggcct gcagttttcc ggcagttcgg gacacgcgcc gaggatgccg
    16861 ccgctgaagt cgtttaaacg gtggaagtcg ctgcccgcac tggcgagcat gccgaagcgt
    16921 tctgccaaaa atgcgtagtt gaggcggtcg tttttgcagc agttgccgct gtggacttcg
    16981 atgcccgcgc cgccgaggtt tttaaattct tcaaacagat tgcgcttggc ggtagcggac
    17041 aaatcatagc gcatcggatg ggcgatgact gccatgccgc ccgcgccgtt gacggcggag
    17101 acgcagtctt ccagcgtcgc ccattcgtgt cggacggcgc aggatttgcc gtcgcccaag
    17161 tatttggtga acgcctgctg cttgtttttg acgtgtccca cccgaatgag gaactcggcg
    17221 acgtgtgtgc ggctgaccat ttctttgttt gccgccagcg cgagcgcgcc gtcgtatgcg
    17281 cccgaaatgc cgcgtttttc cagcttggcg gcgatggctt cgaggcgttt cagacggcct
    17341 tgccgcactt gcgccaacag gttttgcagg ttttcgtctt gttcgtcaaa gtctaagccg
    17401 acaacgtgta tggtacgccc gcgccacgtt acggagattt ccacgccgtt aatcaggcgc
    17461 aaaccgagcc tgtcggcttc ggcacgcgct tcggcgatgc cgccggtgtg gtcgtggtcg
    17521 gtcaacgcca gcagcgtgca gccgttttga tgcgcgaggc gcacaacttc ggcgggggag
    17581 agcataccgt cggaaacggt ggaatggcag tgcaggtcta tcataaggcg ttatgtgcgt
    17641 ggtaaatggt gggcagggtg tttcaatatt gtcgggcggt gtggcggcgg tgatttcaaa
    17701 aaacaggtgt atggcaaatg caaaggaaaa gccgctatgc cgtcattcca gcgcaggcgg
    17761 gaatccagac tttgatttat tggaaatgtt taaggttaac cgctatttca aacttccgga
    17821 ttcctgcttt cgagggaatg gcgatatgac cgttttcaat tttaatctac tataaaagac
    17881 tgtctgaaaa cgtggtttta tagtgaatta aatttaaacc ggtacagcgt tggctcgcct
    17941 tgccgtacta tttgtactgt ctgcggctcg ccgccttgtc ctgatttttg ttaattcact
    18001 atatcaagcc gaaccgtttt cagacggcat cgtccgacca acccgcttct ttcaatttcc
    18061 gccgttgcgc gtcgtagcgg gccttatccg cccaataaat cgtctgaata cacgcctcgc
    18121 cgcagtcgct gccgcagcat tcccacgact cgggtcggac gggttcgtct aaaagcggct
    18181 cgcccaaaag ggcttcggct ttatgcttca gggtcatatc catcggcgat ttccaagcgc
    18241 gcaccgtcaa actcgatgac ttcgccgccg cgtattttgg cggttttacg ggtttcggtt
    18301 tcgccgttgc gcgacaccaa cccttcggca atcaacgcct tcgcctgtcc gccgctttcg
    18361 gcaagtccgg ccaatttcaa gaggtcgcac aaggcgatgt attcgttgtc ttcgagatag
    18421 acgatggctt ccatgatgtc cccttgcaga aagagaccgt tattgtagca cctgccgccg
    18481 ccgtacccaa aattaccgca aaaccagcga tgtatccgca ccgcctgttc cgtaaaagta
    18541 aaaatgccgt ctgaaacccc gtatgccgca atccgttcaa agaaatcctg cccaacggca
    18601 gactgcaaat cctgttcccc gacgaatccg cattgacgct gatgcacatc ctcaaacacg
    18661 aactgcccga tacaccggca atcggcatca aaacgaaatc aaaaacctgt ttgaacgtaa
    18721 aattaattta actgcttgcc atccgtccga ataaggtata tagttcctta taactagttt
    18781 gatagtcctt tatatctatc aatactcctt gggaagcctc caccacacgg taggaggcat
    18841 ttttttgccg tcgtaaaagc tcaaaaacat ttgcaggtca tgccgtctga atctgaaacg
    18901 gcatgaccta caccgccatc taaagacaac cctgctacaa tacgcctttt attgttcacg
    18961 ccgattttgc catgaccgag ccgacctaca tccccctgcg cctgcatacc gagttctcaa
    19021 ttaccgacgg tatggtgcgg attaaaaaac tgattgccaa agcgcaggaa tacggtttgc
    19081 ctgctttggg catcagcgat ttgatgaacg aattcggttt ggtgaaattc tataaagcct
    19141 gccgcagtgc ggggattaag cctgtcgggg cggcggacgt gtggataggc aatccgaatg
    19201 cgcccgacaa gccgttccgc gccatgttga ttatccgcaa cgatgcgggc tatcagcgtt
    19261 tgagtgagct tttgacagag gcctatgtcg gtaaagaccg caatgtccat catgcggaac
    19321 tcaaccccga atggctggaa aacggcgaca acagcggctt gatttgtttg agcggcgcgc
    19381 attacggcga agtgggcatg aatctgttga acggcaatga agacgcggcg cgcgcggcgg
    19441 cgttgaaata tgcggcatgg tttcccgatg cgttttattt agagctgcaa cgcctgcccg
    19501 aacgccccga atgggaggct tgcgtttccg gcagcgtgaa gctggcggag gaactgggtt
    19561 tgccggtggt ggcgacgcat ccgacgcagt ttatgaaccg cgacgatttc aacgcgcacg
    19621 aggcgcgggt gtgtatcgcg ggcggctggg tattgacgga caaaaaacgt ccgcgcgatt
    19681 tcacgccgga ccagtttttc attccgccgg aaacgatgct ggagcgtttc gccgacttgc
    19741 ccgaagcctt ggaaaacacg gtggaaatcg ccaaacgctg caacctgcac atcacattgg
    19801 gcaaaaactt cctgcccctt ttccccacgc ccgacggttt atcgcgcgat gactatctca
    19861 tcaaactctc aaacaagggc ttgcaggaac gcatggttca gctttatccc gacgaggcgg
    19921 agcgtgcggc aaaaatgccg gaatatcagg aacgtttgga ttttgagctg aacatcatca
    19981 tccagatgaa attccccggc tatttcctta tcgtacaaga ctttatcaac tgggcgaaaa
    20041 cgcacggctg tccggtcggg ccgggacgcg gttcgggcgc gggttcgctg gtggcgtatt
    20101 cgctgaaaat taccgacctc gacccgctca aatacgcgct gctgttcgaa cgtttcttga
    20161 accctgaacg cgtttccatg cccgacttcg acgtggactt ctgtcaggca aaccgcggcc
    20221 gcgtgattga atatgtacgc gaaaaatacg gtgcggaagc agtcagccag attgttacct
    20281 tcggcacgat gtcgtccaaa gcagtgattc gcgacgtggg gcgcgtactg gaactgccgt
    20341 ttatgctgtg cgacaaactg tccaagctga ttccgttgga agccaacaaa cctttgggtt
    20401 tggacgacgc gatgaaggcg gagccgcaga ttcaggaatt aatcgaagcg gaagaagcgg
    20461 acgaactgat tacgctggcg aaaaagctgg aagatttgac gcgcggtttg ggtatgcacg
    20521 cgggcggcgt gttgattgcg ccgggcaaga tttccgatta cagccccgtg tatcaggcgg
    20581 acgaatccgc ctcgcccgta tccatgtacg acaagggcga cgtggaagac gtgggtttgg
    20641 tgaaattcga ctttttaggt ctgcgcaacc tgaccatcat cgaaatggcg cagaacaaca
    20701 tcaaaaacac caccggcgac atcatcgatg tcggcaaaat tccgcttgac gaccaggttg
    20761 cctaccaaat cttccgcgat gcgaacacca ccgccgtgtt ccagttcgag tcgacaggca
    20821 tgaagaaaat gctgaaaaca gcgcatacga ccaagtttga agaacttatc gccttcgtat
    20881 cgctctaccg acccggcccg atggacaata ttcccgactt cgtcgcgcgt atgaaaggtc
    20941 aggaattcca atacatccac ccgctactcg aaggcatcct cgcaccaacc tacgggatta
    21001 tggtgtatca ggaacaagtg atgcaggcgg cgcagattat cggcggctac tcgctcggcg
    21061 gcgcggacct gctgcgccgc gcgatgggta agaaaaagcc cgaagaaatg gtgaaacacc
    21121 gcgaaatctt cgccgaaggc gcggcaaaac aaggcatttc gcgcgaaaaa tccgacgaaa
    21181 tcttcaacta tatggaaaaa ttcgccggct acggtttcaa caaatcccac gccgccgcct
    21241 acgccctgat ttcctaccag accgcatggc tcaaggcgca ctaccccgcc gaatttatgg
    21301 cggcgaccat gtcgtccgaa ttggacaaca ccgaccagct caagcatttc tacgacgact
    21361 gccgcgccaa cggcatcgag ttcctgccgc ccgacatcaa cgaatccgac taccgcttta
    21421 cgccgtatcc ggacatgaaa atccgctacg cgctcggcgc gattaaaggc acgggcgaag
    21481 ccgccgtcga atccatcacc gccgcgcggc aaagcggcgg caagtttacc ggcctgttgg
    21541 acttctgcga gcgcgtcggc aaagaacaca tgaaccgccg caccctcgaa gccctgatac
    21601 gcggcggcgc gttcgacagt atcgaaccca accgcgccat gctcttggcg aacatcgacc
    21661 tcgctatgga caacgccgac caaaaagccg ccaacgccaa tcagggcggg ctgttcgaca
    21721 tgatggaaga cgccatcgaa ccggtgcggc tcatcgacct gccgaggtgg agcgaatcgg
    21781 aaaaactcgc cgaagaaaaa accgtcatcg gcttttacct gtccggccac ccgttcggcc
    21841 cgtatgccca agaagtctgc caaatcgcac cgaccaaatt agaccgtctg aagccgcaag
    21901 acagcgtgcg cctcgccgga ttcgttaccg ccgtgcgtac gatgatgggc aagcgcggca
    21961 aaatcgcctt cgtcagcctt gaagatttga gcgggcaggt tgaaatcatg gtcggcagtc
    22021 agacgctgga aaactgcgcc gactgcctca aagccgacca agtgctgatt atcgaatcca
    22081 aagtcagccg cgacgactac ggcggcggcg acggactgcg catcatggca aaccaagtca
    22141 tgaccctgca aacggcacgc gaacgctacg cccgcagcct cagcctcgcc ctcgccccgc
    22201 atcacgacat cggcggactg gtacggctgc tctcctccca ccaactgccc gacacgccgc
    22261 gcatcccgct gcaactgtcg tatgccaacg aaaaagcgtc gggcaggctt caagtgccgc
    22321 cgaaatggac ggttacaccg agctccgcat tgttcggcga actggaaaca ttgctcggca
    22381 gccggtcggt gcgcgtcaac tggtaaccca aaatataaat gccgtctgaa gcccaaaatc
    22441 ggtttcagac ggcatttttt aaccgaaata aacgatgccc cttaaagcag aagctttaag
    22501 gggcagagcg ttgcggcaca tcttttcaga cggccttatt gtagcaacgg ttctcatttc
    22561 gcagtgcgac aatatgtttg ggattctagc cgttgtgaga tgataagtca ataatctatt
    22621 tgtatataaa taagacaata agatatatta tcattatttg caacgttgtt tacggagtaa
    22681 taaatggctg ccttcaaacc taatccaatc aactacatcc tcggcctcga tatcggcatc
    22741 gcatccgtcg gctgggcgat ggtagaaatt gacgaagaag aaaaccccat ccgcctgatt
    22801 gatttgggcg tgcgcgtatt tgagcgtgcc gaagtaccga aaacaggcga ctcccttgcc
    22861 atggcaaggc gtttggcgcg cagtgtccgc cgcctgaccc gccgtcgcgc ccatcgcctg
    22921 cttcgggccc gccgcctatt gaaacgcgaa ggcgtattac aagccgctga ttttgacgaa
    22981 aacggcttga tcaaatcctt accgaataca ccatggcaac ttcgcgcagc cgcattagac
    23041 cgcaaactga cgcctttaga gtggtcggca gtcttgttgc atttaatcaa acaccgcggt
    23101 tatttgtcgc aaagaaaaaa cgagggcgaa actgccgata aagagcttgg cgctttgctt
    23161 aaaggcgtgg ccaacaatgc ccatgcctta cagacaggcg atttccgcac accggccgaa
    23221 ttggctttaa ataaatttga gaaagaaagc ggccatatcc gcaatcagcg cggcgattat
    23281 tcgcatacgt tcagccgcaa agatttacag gcggagctga ttttgctgtt tgaaaaacaa
    23341 aaagaatttg gcaatccgca tgtttcaggc ggccttaaag aaggtattga aaccctactg
    23401 atgacgcaac gccctgccct gtccggcgat gccgttcaaa aaatgttggg gcattgcacc
    23461 ttcgaaccgg cagagccgaa agccgctaaa aacacctaca cagccgaacg tttcatctgg
    23521 ctgaccaagc tgaacaacct gcgtatttta gagcaaggca gcgagcggcc attgaccgat
    23581 accgaacgcg ccacgcttat ggacgagcca tacagaaaat ccaaactgac ttacgcacaa
    23641 gcccgtaagc tgctgggttt agaagatacc gcctttttca aaggcttgcg ctatggtaaa
    23701 gacaatgccg aagcctcaac attgatggaa atgaaggcct accatgccat cagccgtgca
    23761 ctggaaaaag aaggattgaa agataaaaaa tccccattaa acctttcttc cgaattacaa
    23821 gatgaaatcg gcacggcatt ctccctgttc aaaaccgatg aagacattac aggccgtctg
    23881 aaagaccgtg ttcagcccga aatcttagaa gcgctgttga aacacatcag cttcgataag
    23941 ttcgtccaaa tttccttgaa agcattgcgc cgaattgtgc ctctaatgga gcaaggcaaa
    24001 cgttacgatg aagcctgcgc cgaaatctac ggagaccatt acggcaagaa aaatacggaa
    24061 gaaaaaattt atctgccgcc catccctgcc gacaagatcc gcaaccccgt cgtcttgcgc
    24121 gccttatctc aagcacgtaa ggtcattaac ggcgtggtac gccgttacgg ctccccagct
    24181 cgtatccata ttgaaacggc aagggaagta ggtaaatcgt ttaaagaccg caaagaaatc
    24241 gaaaaacgcc aagaagaaaa ccgcaaagac cgggaaaaag ccgccgccaa attccgagag
    24301 tatttcccca attttgtcgg cgaacccaaa tcaaaagata ttctgaaact gcgcctgtac
    24361 gagcaacaac acggcaaatg cctgtattcg ggcaaagaaa tcaacttagt ccgtctgaac
    24421 gaaaaaggct atgtcgaaat cgaccatgcc ctgccgtttt cgcgcacatg ggacgacagt
    24481 ttcaacaata aagtgctggt attgggcagc gaaaaccaaa acaaaggcaa tcaaacccct
    24541 tacgaatact tcaacggcaa agacaacagc cgcgaatggc aggaatttaa agcgcgtgtc
    24601 gaaaccagcc gtttcccgcg cagtaaaaaa caacggattc tgctgcaaaa attcgatgaa
    24661 gacggcttta aagaatgcaa tctgaacgac acgcgctacg tcaaccgttt cctgtgccaa
    24721 tttgttgccg accatatatt gctgacaggt aaagggaaaa gacgtgtctt tgcctcaaac
    24781 ggacaaatta ccaatctgtt gcgcggcttt tggggattgc gcaaagtgcg tgcggaaaac
    24841 gaccgccatc acgccttgga cgctgtagtc gttgcctgct cgaccgttgc catgcagcag
    24901 aaaattaccc gttttgtacg ctataaagag atgaacgcgt ttgacggtaa aaccatagac
    24961 aaagaaacag gaaaagtgct gcatcaaaaa acacacttcc cacaaccttg ggaatttttc
    25021 gcacaagaag tcatgattcg cgtcttcggc aaaccggacg gcaaacccga attcgaagaa
    25081 gccgataccc cagaaaaact gcgcacgttg cttgccgaaa aattatcatc tcgccccgaa
    25141 gccgtacacg aatacgttac gccactgttt gtttcacgcg cgcccaatcg gaagatgagc
    25201 ggtgcacata aagatacttt gagatctgct aaacgatttg ttaaacataa tgaaaaaatt
    25261 agtgttaaac gagtatggtt aaccgaaatc aagttggccg accttgaaaa tatggttaat
    25321 tataaaaatg gtagagagat tgaattatat gaggctctta aggcgcgttt agaggcatat
    25381 ggaggtaatg ctaaacaagc atttgaccct aaggacaatc cgttttataa aaagggagga
    25441 caactggtta aagctgtgag ggtcgaaaaa acccaagaga gcggagtctt attaaataaa
    25501 aaaaatgctt ataccattgc agataatgga gacatggtac gtgttgatgt gttctgtaaa
    25561 gtagataaga aaggaaaaaa tcagtatttt attgttccca tctatgcttg gcaggttgct
    25621 gaaaacattc ttcccgatat tgattgtaag ggataccgga ttgatgatag ctatacattc
    25681 tgttttagct tgcataagta tgatctgatt gcttttcaaa aagatgaaaa atctaaagta
    25741 gaattcgcct actatatcaa ctgtgatagc tctaatggac gattctattt agcttggcat
    25801 gataaaggct ctaaagaaca gcaattccgt attagcaccc aaaatcttgt attgatacaa
    25861 aaataccaag ttaacgaact gggcaaagaa atcagaccat gccgtctgaa aaaacgccca
    25921 cctgtccgtt aaattaatct gtccctgctt cagacggcct gaagcaggga ttttttatat
    25981 caaaataagg ggaaaacatg acttggcgca gcctacttat tcaaaacggc ggcaaactat
    26041 ccttgcaacg ccggcaactg ctgattcaac aaaacggcga gtcccatacc gtaccattag
    26101 aagacatcgc cgttatcatc atcgaaaatc gcgaaaccct gattaccgcc ccgctcctat
    26161 cagccttagc tgaacatggc gcaaccctgc tgacctgcga cgagcagttc ctgccctgcg
    26221 gacaatggct gccttatgcc caatatcacc gccagcttaa aatcctcaag ctgcaactga
    26281 acataagcga acccttaaaa aagcaattct ggcaacatat cgtccgccaa aaaatcctga
    26341 accaagcatt tatcgcagac gaaacaggca atgatcttgc agccaaacgg ctgcgcactt
    26401 tggcatctga agtccgttcg ggcgatacag gaaaccgtga agcccaagct gccgccctct
    26461 acttccaagc cctctttggc gaaaaattta cccgtaatga caacaatgcc gtcaatgccg
    26521 cattgaacta cacctacgcc gtgctacggg ccgcagttgc acgcaccctg accttatacg
    26581 gctggctgcc tgcattaggc ttgtttcata gaagcgaact caatccattc aatctcgccg
    26641 atgactttat cgaaccctta cgcccattag ccgacctgac cgtgatacat ttgtacgaac
    26701 aaggccgtct gaaagccgaa ctgacccccg gcatcaaaca acaccttatc aaaacccttc
    26761 actatcaaat cagcatcgaa cggcaacatt tcagcacctt ggctgccatc gacaaaatgg
    26821 tttcgtcatt tcaagccggt gtaaccgata aaaacgccaa acaactgaaa ctgcctgaaa
    26881 tcctaccatt gaaagaatac cgatatgagt gaggccaaat ttatgaggat tatcgtcttc
    26941 ttcgacctac cggttatcac ggcggcaaag cgcaaagccg ccaatcaatt ccgccagttt
    27001 ttattaaaag acggatacca aatgctccag ctttccgtat acagccgtat cgtcaaaggc
    27061 cgcgattcgt tgcaaaaaca ccacaataga ctatgtgcaa accttccgca agaaggctca
    27121 atccgctgtt tggagataac agaaaagcaa tatgccgcca tgaaactgct gttgggcgag
    27181 ctgaaaaccc aagaaaaaaa ggtcaattca gaccaattat tgttatttta agcccatttt
    27241 ttcagactaa ataaaacggg aaatccttat agaataagga tttcccgttg gggtattgta
    27301 gcactgcgaa atgagaatgg gagctacaac ttcggacagc tgatgggttt cgtcggaatg
    27361 attgtagcac tgcgaaatga gaatgggagc tacaacaaaa gtttatgact tgtacgaatc
    27421 cgcagaattg tagcactgcg aaatgagaat gggagctaca acccctgatt gcaggtgaag
    27481 atgaactgta tgattgtagc actgcgaaat gagaatggga gctacaacaa aatcgtcggc
    27541 ctgctccagc acgacctgat tgtagcactg cgaaatgaga atgggagcta caacctaccc
    27601 gctcggcgta tatgaggcaa tctaattgta gcactgcgaa atgagaatgg gagctacaac
    27661 gcgcacgatt gacggcagca gacgagccaa attgtagcac tgcgaaatga gaatgggagc
    27721 tacaacagcg gtggtagaat cggattttta gagtgaattg tagcactgcg aaatgagaat
    27781 gggagctaca accgtttttc aggtcgaatt atcgaacctt caattgtagc actgcgaaat
    27841 gagaatggga gctacaacct cgaatggcga gtacttgacg ctcaatacat tgtagcactg
    27901 cgaaatgaga atgggagcta caacctcgaa tggcgagtac ttgacgctca atacattgta
    27961 gcactgcgaa atgagaatgg gagctacaac caggtgcttg ggcgtaattt tatccgttgg
    28021 attgtagcac tgcgaaatga gaatgggagc tacaaccctt ttgcaacaat cgtgctttat
    28081 ttgtcaattg tagcactgcg aaatgagaat gggagctaca acttcctgtc ggctttttcg
    28141 gctgctttgc ggattgtagc actgcgaaat gagaatggga gctacaacta tgcttgggtt
    28201 tgagtgggcg attgatgaat tgtagcactg cgaaatgaga atgggagcta caaccttggc
    28261 acgagatggt cgccgtatta aattattgta gcactgcgaa atgagaatgg gagctacaac
    28321 tttatggcta ttcacctgtc gagcaaatca attgtagcac tgcgaaatga gaatgggagc
    28381 tacaacaaga agattgggaa atgtatctca cggaagattg tagcactgcg aaatgagaat
    28441 gggagctaca accggtttga acagcagtat atgggaagaa acattgtagc actgcgaaat
    28501 gagaatgggc gctacaacca gccgttgcga taagcgaacg tgcgttaaag tcattgagac
    28561 acagtgcaat tatggcaaga aaggcgacag atattgtgtc acagatttga aataagaaaa
    28621 aaccgcccac tcacagagta ggcggaaaac ttgcgttttt ttgattgtgg tcgggttagc
    28681 tactgcattg acttaacagc aaagcaaccg ctaaaatgaa cttgtggttc acttcaacgg
    28741 acagcagcaa ctttttccca cgcataagga atttaagcat tttagcttct cctagtgaag
    28801 ttaatcacac aggcgagagc cgaacaaaaa tccccgttgc agcggggatt tttgctgttc
    28861 cctgtttgat gattaaacta aaatcttgca aaatgagacc tttgcaaaat tccccaaaat
    28921 cccctaaatt cccaccaaga catttagggg atttctcatg agcaccttct ttcagcaaac
    28981 cgcacaagcc atgattgcca aacacatcga ccgtttcccg ctattgaagt tggaccaggt
    29041 gattgattgg caacc
//
LOCUS       DBBZYD010000012        28875 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.012, whole genome shotgun sequence.
ACCESSION   DBBZYD010000012 DBBZYD010000000
VERSION     DBBZYD010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28875
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.012"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            188..544
                     /locus_tag="ACJJDL_000450"
     CDS             188..544
                     /locus_tag="ACJJDL_000450"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HGG7573225.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGVYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            535..1017
                     /locus_tag="ACJJDL_000451"
     CDS             535..1017
                     /locus_tag="ACJJDL_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HGG7573226.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            1030..1623
                     /locus_tag="ACJJDL_000452"
     CDS             1030..1623
                     /locus_tag="ACJJDL_000452"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HGG7573227.1"
                     /translation="MASIQNLYETVIGVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEDLHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            1613..2869
                     /gene="nuoD"
                     /locus_tag="ACJJDL_000453"
     CDS             1613..2869
                     /gene="nuoD"
                     /locus_tag="ACJJDL_000453"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HGG7573228.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            2869..3342
                     /gene="nuoE"
                     /locus_tag="ACJJDL_000454"
     CDS             2869..3342
                     /gene="nuoE"
                     /locus_tag="ACJJDL_000454"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HGG7573229.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            3732..5033
                     /gene="nuoF"
                     /locus_tag="ACJJDL_000455"
     CDS             3732..5033
                     /gene="nuoF"
                     /locus_tag="ACJJDL_000455"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HGG7573230.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            5033..5470
                     /locus_tag="ACJJDL_000456"
     CDS             5033..5470
                     /locus_tag="ACJJDL_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573231.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICWKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINEL"
     gene            5760..8021
                     /gene="nuoG"
                     /locus_tag="ACJJDL_000457"
     CDS             5760..8021
                     /gene="nuoG"
                     /locus_tag="ACJJDL_000457"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HGG7573232.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGSLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFSYEGLYHESRLKK
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELLMPLLSQEAAHPDEWAGRLKNLSANAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     TEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLSSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDAIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            8024..9100
                     /gene="nuoH"
                     /locus_tag="ACJJDL_000458"
     CDS             8024..9100
                     /gene="nuoH"
                     /locus_tag="ACJJDL_000458"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HGG7573233.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            9181..9660
                     /gene="nuoI"
                     /locus_tag="ACJJDL_000459"
     CDS             9181..9660
                     /gene="nuoI"
                     /locus_tag="ACJJDL_000459"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HGG7573234.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            9672..10343
                     /locus_tag="ACJJDL_000460"
     CDS             9672..10343
                     /locus_tag="ACJJDL_000460"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HGG7573235.1"
                     /translation="MTFSAILFYILATIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTINPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            10340..10645
                     /gene="nuoK"
                     /locus_tag="ACJJDL_000461"
     CDS             10340..10645
                     /gene="nuoK"
                     /locus_tag="ACJJDL_000461"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HGG7573236.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLNKLKG"
     gene            10940..11812
                     /locus_tag="ACJJDL_000462"
     CDS             10940..11812
                     /locus_tag="ACJJDL_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HGG7573237.1"
                     /translation="MSFSIALPLVYLFIGILIGKTPFRKIKGTFSVILSRWIIPFVIV
                     YNITTYRDGMQYVMLWMIISMGLIILIGKRVDKDPVWNLCLCYLNIGWLGLPIVATLF
                     GDEAAQVLISAYVGSSLFGNSVGVGLLLNNSNFISGLKKTLKSPPVVALVIGMFGIPL
                     GHFVADYFGEVYFFSKIAMGILGMVILGIWLAEIKLNLNDLKKSIKPFLIKNILFIGI
                     VFLFIQIAAYFDLKLILENQKTLYLIPLLPPAANIIVLETAYLKTGRSASMIAYGTIF
                     SLIAISIYILLVQI"
     gene            11813..13837
                     /gene="nuoL"
                     /locus_tag="ACJJDL_000463"
     CDS             11813..13837
                     /gene="nuoL"
                     /locus_tag="ACJJDL_000463"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HGG7573238.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGEEHHSLGKNDNPHESPLVVTLPLILLAIPSVIIGYLAI
                     EPMLYGDFFKDVIFVNTDAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQTFRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            14021..15184
                     /locus_tag="ACJJDL_000464"
     CDS             14021..15184
                     /locus_tag="ACJJDL_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HGG7573239.1"
                     /translation="MTQLFLHSDTPNEKELISIYEKAVSEAVELYIFSAYLTHWDVKN
                     KLNSKLQEFKFIFGQDFGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKN
                     DKNEYYALIGSSNLTHAAFNSNYEANILTKISEQDFIKVKSWADEIAMKSIPVSEDWL
                     EEYQEAEINYKKSTVSQSLMDKLFMEMPNYNQELIAARRKQMRNHQTVCNQLKSLIKQ
                     CAAGKIDNDEFYVEFNKLWSWKSENKGEGVGNRFQDQTWKRTGKSSDFRKLCIAIQSV
                     FDAPLAERDNVVAKQIDWLKECGVSTRGSVFSEMLCQEYPDRYPVLNAPIKKFLEKNK
                     FKSAKGASEGSRYIDLSMKLRALLAMQSEIKNLAELDVLVQAEYRDSTDIDWE"
     gene            15294..16790
                     /locus_tag="ACJJDL_000465"
     CDS             15294..16790
                     /locus_tag="ACJJDL_000465"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HGG7573240.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AVIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGEIRNPHVADM
                     KDINCREFAVLAVLAAAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            16800..18245
                     /gene="nuoN"
                     /locus_tag="ACJJDL_000466"
     CDS             16800..18245
                     /gene="nuoN"
                     /locus_tag="ACJJDL_000466"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HGG7573241.1"
                     /translation="MNWSDLNLMPAMPEIVLLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYARPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVG
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKVAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARLAAGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            18357..18656
                     /locus_tag="ACJJDL_000467"
     CDS             18357..18656
                     /locus_tag="ACJJDL_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HGG7573242.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHNQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(18765..19661)
                     /locus_tag="ACJJDL_000468"
     CDS             complement(18765..19661)
                     /locus_tag="ACJJDL_000468"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HGG7573243.1"
                     /translation="MNPTNDLKAWQLRAQAQTELLLERFLPSEGEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIQYDEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(19645..19869)
                     /locus_tag="ACJJDL_000469"
     CDS             complement(19645..19869)
                     /locus_tag="ACJJDL_000469"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009115303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HGG7573244.1"
                     /translation="MKKNAPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGLKELNLESDE"
     gene            complement(20116..21039)
                     /gene="rsgA"
                     /locus_tag="ACJJDL_000470"
     CDS             complement(20116..21039)
                     /gene="rsgA"
                     /locus_tag="ACJJDL_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HGG7573245.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIEAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            complement(21044..22900)
                     /locus_tag="ACJJDL_000471"
     CDS             complement(21044..22900)
                     /locus_tag="ACJJDL_000471"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7573246.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAY
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPNALPLKVSQGEIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(22926..23063)
                     /locus_tag="ACJJDL_000472"
     CDS             complement(22926..23063)
                     /locus_tag="ACJJDL_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573247.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(23063..23647)
                     /gene="ruvA"
                     /locus_tag="ACJJDL_000473"
     CDS             complement(23063..23647)
                     /gene="ruvA"
                     /locus_tag="ACJJDL_000473"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HGG7573248.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(23729..24055)
                     /locus_tag="ACJJDL_000474"
     CDS             complement(23729..24055)
                     /locus_tag="ACJJDL_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HGG7573249.1"
                     /translation="MNIKHLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(24117..24836)
                     /locus_tag="ACJJDL_000475"
     CDS             complement(24117..24836)
                     /locus_tag="ACJJDL_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HGG7573250.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSALV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNLASSASNPNLSVEKRHYEYVVKMGPFSSQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            complement(24833..24955)
                     /locus_tag="ACJJDL_000476"
     CDS             complement(24833..24955)
                     /locus_tag="ACJJDL_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HGG7573251.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(24966..25430)
                     /gene="trmL"
                     /locus_tag="ACJJDL_000477"
     CDS             complement(24966..25430)
                     /gene="trmL"
                     /locus_tag="ACJJDL_000477"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HGG7573252.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(25495..26220)
                     /locus_tag="ACJJDL_000478"
     CDS             complement(25495..26220)
                     /locus_tag="ACJJDL_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HGG7573253.1"
                     /translation="MDFLSCWRRIADAPTIRRCVLCHGSSGVSDGICAGCRDDLAAYR
                     TDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIHALKHLADLSM
                     VQPLADLMMQNPPDRLADECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGGERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            26219..26962
                     /gene="bioH"
                     /locus_tag="ACJJDL_000479"
     CDS             26219..26962
                     /gene="bioH"
                     /locus_tag="ACJJDL_000479"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HGG7573254.1"
                     /translation="MPDAVKKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTADEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTPDADGIIGRILPDLAR
                     CGTPSALQEALDAAERADARHLLDKIDVPVLLVFGSKDAITPPRMGEYLHRRLKGSRL
                     VVMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            26964..27752
                     /locus_tag="ACJJDL_000480"
     CDS             26964..27752
                     /locus_tag="ACJJDL_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7573255.1"
                     /translation="MNPQDKCWQVHRHLAEYADQRLTLVRNAPKYILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAARKGGFWQRFTGKGVVQHCQSPIAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMAWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
     gene            27890..28159
                     /locus_tag="ACJJDL_000481"
     CDS             27890..28159
                     /locus_tag="ACJJDL_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573256.1"
                     /translation="MYCLRLRRLVLIFVNPLYADAGDVYCVYNIRLKQYTACQVTRVE
                     EHGGKKTHATLLALDWQGNKPLGAEELADLKPLYKDLKNNIGNIV"
     gene            28535..>28875
                     /locus_tag="ACJJDL_000482"
     CDS             28535..>28875
                     /locus_tag="ACJJDL_000482"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HGG7573257.1"
                     /translation="MPTGYVRVGNTAPLVGEDTQRYASFWGDGYDVYRQLRWQQIPEK
                     QRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELKAFPCLSSLFLTKWHK
                     NLYDSGLTKTST"
BASE COUNT         6472 a         7097 c         7931 g         7375 t
ORIGIN      
        1 ataccacgaa ttacggtgta aaaatttata tgaccttata aaatcaaata agaatcgtta
       61 tcataacatg attgtattta ttgggttttt ttgggcgttt tgccgatatt taccttttaa
      121 tggtttttga aattcgctaa aatacgaaat tattgtagaa attttgttaa cggatttggg
      181 tgtaaccatg ttgtccgctt actttcccgt ctttgtcttt atccttgtcg gtcttgcagc
      241 cggcgtactg tttatcctgc tcggcacaat tttgggcccg aaacgtcact atgccgaaaa
      301 agacgcgcct tacgaatgcg gttttgaagc ctttgaaaac gcaaggatga agttcgacgt
      361 gcgctattac ctcgtcgcca tcctcttcat cctgtttgat ttggaggtcg cgtttatgct
      421 gccgtgggct gtcgtgttca aagatttggg cgtgtacggc ttctggtcta tgctggtgtt
      481 tatcgtcgtt ctgacggtag gctttgttta cgaatggaaa aaaggtgcgc tggaatggga
      541 atagaaggcg ttttgaaaaa aggtttcatc accaccagcg cggatacggt gctgaactat
      601 atgcgtaccg gttcattgtg gccggttact ttcggcttgg cctgctgcgc cgtggaaatg
      661 atgcatgcag gtatggcgcg ttatgacctt gaccgtttcg gcatcatttt ccgtccgtcc
      721 ccacgtcagg ccgacctgat gattgtggca ggtacgctga ccaacaaaat ggcgcccgcc
      781 ctgcgccgcg tatacgacca gctcgccgag ccgcgttggg tattgtctat gggctcgtgt
      841 gccaacggcg gcggttatta tcactattct tattccgttg tgcgcggtgc cgaccgcgtc
      901 gtgccggtag acgtttatgt gccgggttgt ccgccgactg cggaagccct gatttacggc
      961 ctgattcagc tccaacaaaa aatcaagcgc acttccacca tcgcgcgtga cgagtaagga
     1021 gaggacgata tggcaagcat tcaaaattta tacgagaccg tcatcggtgt gctgggcaat
     1081 caggcaggca aagtcatttc agctttgggc gagattaccg tcgagtgtct gcccgaacac
     1141 tatatctcag tcatgaccgc attgcgcgac catgaagatt tgcatttcga gcttctggtc
     1201 gatttgtgcg gtgtcgatta cagcacttac aaaaacgaag tatggcaggg caaacgcttt
     1261 gccgtcgtca gccagctgct ttccgttaaa aacaatcaac gcatccgcgt acgcgtctgg
     1321 gtttcagacg acgacttccc cgtagtcgaa tccgtagtcg atatttacaa cagcgcggat
     1381 tggtacgaac gcgaagcctt cgatatgtac ggcatcatgt tcaacaacca cccggacttg
     1441 cgccgcatcc tgaccgatta cggctttgtc ggacatccgt tccgcaaaga cttcccgatt
     1501 tccggctatg tggaaatgcg ttacgacgaa gagcaaaaac gcgtgattta ccaacctgtt
     1561 accattgagc cgcgcgagat cacgccgcgt atcgtccgtg aggagaacta cggtggccaa
     1621 taaattaaga aactacacca tcaacttcgg cccgcaacac cctgcggcgc acggcgtatt
     1681 gcgtatgatt ttggagttgg agggcgaaac catcgtccgt gccgatccgc atatcggcct
     1741 cctgcaccgc ggtactgaaa aactggctga aaccaaaacc tatctgcaag ccctgcccta
     1801 tatggaccgc ttggactacg tttccatgat ggtcaatgag caggcgtatt gtttggcagt
     1861 agaaaaactt gccggtatcg atgtacctat ccgcgcccag tatatccgtg tgatgtttgc
     1921 cgaagtaacg cgcatcctca atcacttgat gggcatcggt tcgcatgcct tcgacatcgg
     1981 cgcgatgacc gccatcctct acgccttccg cgaccgcgaa gagctgatgg acttgtacga
     2041 agccgtttcc ggcgcgcgta tgcacgcagc ctacttccgt cccggcggcg tttaccgcga
     2101 cctgcccgac ttcatgccta aatacgagag cagcaaattc cgcaatgcca aagtattgaa
     2161 gcagctcaac gaatcccgcg aaggcaccat gctcgacttt atcgatgcct tctgcgaacg
     2221 cttccccaaa aatatcgaca cactcgaaac cctcctgacc gacaaccgca tctggaaaca
     2281 gcgtaccgtc ggcatcggcg tcgtctcccc cgaacgcgcc atgcaaaaag gctttaccgg
     2341 cgtgatgttg cgcggttcgg gcgtggaatg ggacgtgcgt aagacacagc cttacgaagt
     2401 gtacgacaaa atggatttcg acatccccgt cggcgtcaac ggcgactgtt acgaccgtta
     2461 cctctgccgt atggaagaaa tgcgtcaatc cgtacgcatc atcaaacaat gttccgagtg
     2521 gttgcgtgtc aatccgggtc cggtcattac cacaaaccac aaatttgctc cgcccaaacg
     2581 taccgaaatg aaaacaggta tggaagacct gattcaccat ttcaaactct ttaccgaggg
     2641 tatgcacgtt cccgagggtg agacctacac cgctgtcgaa catccgaaag gcgagttcgg
     2701 cgtttacatc atttcagacg gcgcaaacaa accctaccgc ctgaaaatcc gcgcacccgg
     2761 cttcgcccat ctgcaaggca tggacgaaat ggcaaaaggc cacatgctcg ccgacgtcgt
     2821 tgccatcatc ggtacgcagg acatcgtatt cggggaggtt gaccgataat gttatccgca
     2881 gagtccttaa aacaaatcga cacagaactg gcgaaatatc ccgccgacca acgccgttcc
     2941 gccatcatgg gtgcgttgcg tatcgcccaa accgaaaaag gctggctcgc ccccgaaacc
     3001 atcgcttttg ttgccgacta tatcggcatc acgcctgcac aagcctacga agtcgccact
     3061 ttctacaata tgtacgacct tgagcctgtc ggcaaataca aactgaccgt ttgtaccaac
     3121 ctgccctgcg ccctgcgcgg cggtatggct accggcgaat acctcaaaca aaaactcggt
     3181 atcggctacg gcgaaactac ccctgacggc aagtttaccc ttgtcgaagg cgaatgcatg
     3241 ggcgcatgcg gcgacgctcc cgttatgctg gtcaacaacc acagcatgtg cagctttatg
     3301 accgaagaag cgattgagaa gaaactggcg gagttggagt aggtcgtctg aaacgacgat
     3361 ttaaacgtag gtcggatact tgtagccgac agagtgggta aaaaggcaaa atgtcggatt
     3421 taagaatccg ccctactgaa ataccgaaat gccgtcattc ccgcgcaggc gggaatccac
     3481 cggtaagatt cggtttctga atttaataag acattgctta ccattgagga tggattcccg
     3541 cctgcgcggg aatgacgaca gacaagcaag tggtcgagat ccaacaaaaa cgattaaagg
     3601 tcgtctgaaa atatcgattt gataaactag attttatttc agacgacgtt acaagccggt
     3661 acacaaagac atcttaaggt cgtctgaaac agcggccgca accgatacga aaacaaacag
     3721 gcacaccaaa aatggctatt taccaatcag gcgtgatttt tgaccaagtg gataccgcca
     3781 atcccgattg ctggacattg gacgaatacg tcaaacgtgg cggttatacc gccctgcgta
     3841 aaatcctgtc cgaaaacatc tcgcaaaccg atgtgattga cgaagtcaaa acctccggct
     3901 tgcgcggtcg tggcggtgcg ggcttcccga ccggtttgaa atggagcttt atgccccgtt
     3961 ctttccccgg cgaaaagtac gtcgtttgca acaccgacga aggcgagccg ggtacattta
     4021 aagaccgcga cattattatg ttcaaccccc atgccctgat tgaaggcatg attatcgccg
     4081 gttacgcgat gggcgcgaaa gccggttaca actatatcca cggcgaaatt tttgaaggct
     4141 accaacgctt tgaggccgct ttggagcagg cgcgtgccgc aggctttttg ggtaaaaata
     4201 ttttgggttc ggattttgaa ttcgaactct tcgcccacca cggctacggt gcatacatct
     4261 gcggcgaaga aaccgcattg cttgaatcgc tggaaggcaa aaaaggccag ccgcgcttta
     4321 aaccgccatt ccctgcttcg ttcggcctgt acggcaaacc gactaccatc aacaataccg
     4381 aaactttctc ctccgtttca ttcattatcc gtgacggcgg acaggcattt gccgataaag
     4441 gtattccgaa tgcaggcggt accaaattat tctgtatttc cggccatgtc gagcgtccgg
     4501 gcaactatga agtgccattg ggcacaccgt ttgccgaagt cttgaaaatg gcaggcggta
     4561 tgcgcggcgg caaaaaactc aaggccgtta ttcctggcgg ttcgtccgcg cccgtattgc
     4621 ctgccgacat catgatgcag acaaatatgg actacgactc gatttccaaa gcaggctcga
     4681 tgctgggttc tggcgcgatt atcgtcatgg acgaagacgt gtgcatggtg aaagcccttg
     4741 agcgcctgag ctacttctac tacgacgagt cttgcggcca atgtacgcct tgccgagaag
     4801 gcaccggctg gctttaccgc atcgtccacc gcatcgtaga aggcaaaggc cgcatggaag
     4861 atttggattt gctggattct gtcggcaacc aaatggcagg ccgcaccatc tgcgcccttg
     4921 ccgatgccgc cgtcttcccc gtccgaagct ttaccaagca tttccgtgat gagtttgtgc
     4981 attacatcga acacggcgga ccgatgaaag agcataagtg gggagggtgg taatggtgga
     5041 agctaaaatt tttattctat acggtgcagc caacaaaggt aagagtacga cactcaatac
     5101 gctttttaat cagatttgtt ggaaattttc taaatttcta gtcttttttg aaagacatgg
     5161 aaatggctta gattttgttg cagtatttga tcatgaaggt cagagaattg gtttttattc
     5221 atctggtgat aatgaatacg aggttaggag aaatttatac aaactttatt cgcataattg
     5281 tgattttatt tttggcacgt caaggacacg gggtggtagt tgcgatgcag taggatgtta
     5341 tgcagagtta ttgcatggcg atgtaaatat aattaattgg tgtgaaaagt ttgagcctac
     5401 agatgaagac aatgagcgtg ctgttaaaga gttatttaag tcatttaaaa atataataaa
     5461 tgagttatag ttttagttgg ttttatattg gttaaaagca aaatgctaaa aatttaactt
     5521 tgccgtcatt cccgcgtagg cgggaatcca tagtggaatt tacagaaccc gatatttgaa
     5581 aagcagttgc cgaaattcaa aaaatggatt cccgcctgtg cgggaatgac ggcaaggtgg
     5641 cagtaaacgt tttaaacagt attgattgtc aatgaaactc aaaaggccgt ctgaaaccca
     5701 tttttcagac gacctccata aaagattatt tatcaaatac ccgtaactag gaacgaacca
     5761 tgttacaaat cgaaatcgac ggcaaacaag tatctgtgga gcagggcgcg acggtgattg
     5821 aagccgcgca caagctcggt acttatattc cgcatttctg ttaccacaaa aaactttcca
     5881 tcgccgccaa ctgccgtatg tgtctggtga acgtagaaaa agccccaaaa cccctgcctg
     5941 cctgtgccac gccggttaca gacggcatga ttgtgcgtac gcattcggca aaagcccgag
     6001 aggcgcagga aggcgtgatg gagttcctgc tcatcaacca tccgcttgat tgtccgacct
     6061 gcgaccaagg cggggaatgc cagttgcagg atttggcggt gggctacgga aaaaccacca
     6121 gccgctacac cgaagaaaaa cgttccgtcg tcggcaaaga tatggggtcc ttggtttccg
     6181 ccgaggaaat gagccgctgt atccactgca cccgctgcgt tcgtttcact gaagaaatcg
     6241 ccggtttgca ggaaattgcg atggtgaatc gcggcgaaca ctccgaaatc atgcccttta
     6301 tcggcaaaac ggtggaaacc gaattgtcgg gcaacgtcat tgatttgtgt cccgtcggcg
     6361 cgctgaccag caaaccgttc cgcttcaatg cgcgtacttg ggaattgaac cgccgcaaat
     6421 ccgtttccgc ccacgacgct ttgggcagca acctgattgt acaaaccaaa gaccataccg
     6481 tccgccgcgt gttgccgctg gaaaatgaag cgattaacga atgttggctg tctgaccgcg
     6541 accgtttttc ctacgaaggc ctgtatcacg aaagccgtct gaaaaaaccg aaaatcaaac
     6601 agggcggcga gtggatggac gtggattgga aaaccgcgtt ggaatatgtc cgcagcgcga
     6661 ttgaatgtat cgccaaagac ggcaaccaaa accaagtcgg catttgggcg aacccgatga
     6721 atacggttga agagctgtat ctggccaaaa aacttgccga cggcttgggt gttaaaaact
     6781 ttgccacccg tttgcgccaa caagacaaac gtctttcaga cggccttaaa ggtgcgcaat
     6841 ggttgggaca aagcattgaa tcgctggcgg acaacgatgc cgtattggta gtcggtgcga
     6901 acctgcgcaa agaacagccg ctcctgaccg cccgcctgcg ccgcgccgcc aaagaccgta
     6961 tggcgttgag tgtattggcc ggcagtaaag aagagttgtt gatgccgctt ctctctcaag
     7021 aagccgcaca tcccgacgag tgggcaggcc gtctgaaaaa cctgtctgcc aatgcggaac
     7081 acgccgttac cgccagcctg aaaaacgctg aaaaagcagc ggtgattttg ggcgcggaag
     7141 tgcaaaacca tcctgattac gccgccattt atgccgccgc gcaagagctg gcggatgcaa
     7201 ccggcgcggt actgggtatt ttgccgcaag ccgccaacag cgtcggtgcg gacgtattgg
     7261 gcgtgaactc aggtgagagc gttaccgaaa tggcaaacgc gccgaaacag gcagtcttgc
     7321 tgctcaacgt cgagcctgaa attgatacgg ttgacggtgc aaaagccgta gccgcgttga
     7381 aacaggcaaa aagcgtgatg gcgtttacac cgtttgtcag cgaaacgctg ctggacgtgt
     7441 gcgacgtgtt gttgccgatt gcgccgttta ccgaaacctc aggcagcttc atcaatatgg
     7501 aaggccgtct gcaatctttc cacggcgtgg tacaaggctt cggcgattcg cgtccgatgt
     7561 ggaaagtgtt gcgcgtattg ggcaatctgt ttgacctgaa aggttttgaa taccacgata
     7621 ccgctgcgat tttgaaagac gcgctggatg cagaaagcct gtcgtccaaa ctggacaacc
     7681 gcagtacatg gacaggggag ggcgttcaga cggcatcaga ccgcctcgtc cgtgtcggcg
     7741 gcgtcggtat ttatcacacc gatgccatcg tacgccgttc cgcaccgttg caagaaacca
     7801 gccatgccgc cgtgcctgcc gcgcgtgtaa atccgaacac attggcacgc ttgggcctgc
     7861 aagacggaca aaccgctgtc gccaaacaaa acggcgcaag cgtatcggtt gctgtcaaag
     7921 ccgatgccgg tttgcctgaa aacgtggtgc atctgccgct gcataccgaa aatgccgcgc
     7981 tgggtgcgtt gatggacact attgaactgg cgggagcttg atcatgcaag aatggttcca
     8041 aaacctcttt gccgcaacgc tcggtctggg cgatttgggc atcaccgtag gcttggtggt
     8101 atccgtcatc gtcaaaatcg tgattatcct gattccgctg attctgaccg ttgcctacct
     8161 gacgtatttc gaacgtaaag tcatcggctt catgcagctt cgcgtcggtc cgaacgtaac
     8221 cggcccgtgg ggtctgattc agccgtttgc cgacgtgttc aaactcttgt ttaaagaggt
     8281 aacccgtccg aagctgtcaa acaaagccct gttctacatc ggcccgatta tgtcgcttgc
     8341 tccgtctttc gcagcatggg cagtgattcc gttcaacgaa gaatgggtgc tgaccaacat
     8401 caatatcggc cttttgtaca tcctgatgat tacctcgctg tcggtttacg gcgtgatcat
     8461 cgcgggctgg gcttccaact ccaaatattc gttcttgggt gcaatgcgtg cttccgcaca
     8521 aagcatttcc tacgagattg ccatgagtgc cgcgctggtg tgcgttgtga tggtatcggg
     8581 cagcatgaac ttctccgaca tcgttgccgc acaagccaaa ggcatcgcgg gcggttccgt
     8641 gttctcgtgg aactggctgc cgctcttccc catcttcatc gtttatctga tttccgccgt
     8701 tgccgaaacc aaccgtgcgc cgtttgacgt ggcagagggt gagtctgaaa tcgttgccgg
     8761 tcaccacgtc gaatattccg gcttcgcgtt cgcgctgttc ttccttgccg aatacatttt
     8821 catgattctg attgccgcgc tgacatcgct gatgttcctc ggcggctggt tgtccccgtt
     8881 cccgcaaagt tggggcttta tcggcacacc ttccgcattc tggatgttcg tgaaaatggc
     8941 ggcggtgttg tactggtacc tgtggatccg tgcaaccttc ccgcgctacc gttacgacca
     9001 aatcatgcgt ttgggctgga aagtgctgat tccgatcggc ttcgcctaca tcgtggtttt
     9061 gggcgtgtgg atgatttcac cgctgaattt gtggaaataa gtttcagacg gcatcttgag
     9121 gccgtctgaa caaagcgatt ttgaatacct aacgaaatcc ctgttttgag ggaacataat
     9181 atggctaact tagtaaaaac ctttctgctt ggcgaattgg taaaaggtat gggcgtaacg
     9241 ctcaaaaact ttttcgcccg caaagacacg atttattttc ccgaagagaa aacgccgcaa
     9301 tccgtgcgtt tccgcggcct gcacgcgcag cggcggtatc cgaacggtga ggaacgctgc
     9361 attgcgtgta agttgtgcga ggcggtgtgt ccggcaatgg cgatcaatat cgaatcggaa
     9421 gaacgcgaag acggcacccg ccgcaccaag cgttacgaca tcgacctgac caagtgcatc
     9481 ttctgcggct tctgcgaaga ggcctgccca accgatgcga ttgtggaaac gcatattttt
     9541 gaataccacg gcgagaaaaa aggcgacttg cacatgacca agccgatcct cttggcaatc
     9601 ggcgacaaat acgaagccga aatcgccaaa cgcaaagccg ctgacgcgcc gtaccgttaa
     9661 ggagcagacg aatgactttt tccgcgattc tgttctatat ccttgccacc atcgtcttat
     9721 acggcgcgct gcgtaccgtt accgctaaaa accctgtcca cgccgctttg catctggtgc
     9781 tgaccttctg cgtgagcgcg atgctttgga tgctgatgca ggctgagttt ttgggcgtga
     9841 cgctggtggt ggtttacgtc ggcgccgtga tggtgttgtt cctgttcgtc gtgatgatgt
     9901 tgaacatcga cattgaagaa atgcgtgccg gtttctggcg gcacgcgcct gttgccggtg
     9961 tggtcggcac attgttggcg gttgcgctga tcctgattct ggtcaacccg aaaaccgacc
    10021 ttgccgcatt tggtctgatg aaagacattc ctgccgatta caacaatatc cgcgatttgg
    10081 gcagccgtat ttataccgac tatctgttgc cgtttgaatt ggcggcggta ttgctgttgt
    10141 tgggtatggt ggcggcgatt gcgctggttc accgtaaaac catcaatccg aaacgtatgg
    10201 atcctgccga ccaggttaaa gtacgcgccg accaaggccg tatgcgtctg gtgaaaatgg
    10261 aagcggtcaa accgcaagtc gaatctgccg aagaaagcga agtttcagac ggtctcaagc
    10321 cggaagggga gggcaaagca tgattacctt gacgcattat ctggtattgg gcgcgctcct
    10381 gttcggtatc agcgcgatgg gcatctttat gaaccgcaaa aacgtgctgg tcttgctgat
    10441 gtccatcgag ctgatgcttt tggcggtgaa cttcaacttt atcgccttct cgcaacattt
    10501 gggcgatacc gccggacaga ttttcgtatt cttcgtactg accgttgccg ctgccgaatc
    10561 tgccatcggt ttggcgatta tggtattggt gtaccgcaac cgacaaacaa tcaacgttgc
    10621 cgatttgaac aaacttaaag gttgatttgg aatttttaaa gaaaaaagga gatagataat
    10681 gtttgatatt gctgctgttg gattaggtgc agcaggagtt agcttaatca aacagttaca
    10741 ggtaaaaact cttgtttgcc atatcaaggc actttggtct ccacacgccc atatatgcat
    10801 aaattgtgga ttagtatgag tgaaagagaa tgtttacaat ttcaagggct cattggcagc
    10861 cattgggctg tatggcgggt aattgggtaa aacaatgggt ttttgaaaat tttagaattt
    10921 cagaaagtgg agagtgatta tgtcattttc aattgctctt ccattggtat atctgtttat
    10981 tggcattttg attgggaaaa ccccttttag aaaaattaaa ggcacttttt ctgtaatatt
    11041 gagcagatgg attatccctt ttgttattgt ctataacata acgacatatc gtgatggtat
    11101 gcagtatgtt atgttatgga tgattatttc gatggggttg attatcctaa tcgggaaaag
    11161 agttgataaa gatcctgttt ggaatttgtg tttgtgctat ttgaacatcg gatggttggg
    11221 gcttcccata gttgcaacct tgtttggaga tgaggcggcg caagtgctta tttcggcata
    11281 cgtgggaagt tctttattcg gaaattcggt cggggtcggg ttgttattga ataatagtaa
    11341 tttcatatcc ggattgaaaa agactttaaa atcccctccc gttgttgcat tggtaatagg
    11401 aatgttcggt attccgctag ggcattttgt agcagattat tttggggaag tttatttttt
    11461 ctcgaaaata gcaatgggaa tattggggat ggtgatactc ggtatttggc tggctgagat
    11521 aaaactaaat ttgaatgatt tgaagaaaag tattaaaccg tttctaataa aaaacatttt
    11581 atttataggg attgtttttc tttttatcca aatagctgca tattttgact tgaagttgat
    11641 tcttgaaaac caaaaaacat tgtatttaat accgttgctg ccgcctgctg ccaatattat
    11701 tgtgttggaa acggcatatt tgaaaacagg gcgttcggct tctatgattg cgtatggtac
    11761 gatttttagt ttaatcgcaa tcagcattta tattttactg gtgcaaattt aaatgaacga
    11821 catgacttta tatctcatca tcgccctcgt gcctttggca ggctcgctga ttgcgggttt
    11881 gttcggcaac aaaatcggac gtgccggcgc gcatacggtt acgatactcg gcgtggctgt
    11941 gtccgccgtg ctgtcggctt atgtgctgtg gggattcctc aatggcagcc gtgccaagtt
    12001 tgacgaaaac gtctatacct ggctgacaat gggcggcttg gatttttccg tcggcttctt
    12061 ggttgatacg atgacggcga tgatgatggt cgtggtaacg ggcgtgtcgt tgatggtgca
    12121 tatctacacc atcggctata tgcacgacga aaaagtcggc taccaacgct tcttcagcta
    12181 catttctttg tttacattca gcatgttgat gctgattatg agcaacaact tcatccagct
    12241 cttcttcggt tgggaagcgg tgggtttggt gtcgtatctc ttgatcggtt tctatttcaa
    12301 acgcccgagc gcgacatttg ccaacctgaa agcctttttg atcaaccgtg tcggcgactt
    12361 cggctttttg ctcggtatcg gcttggtgct tgcctatttc ggcggcagcc tgcgctatca
    12421 ggacgtattc gcctatctgc ccaacgtcca aaatgccacc atccagcttt tccccggcgt
    12481 ggaatggtct ttgattaccg taacttgttt acttctgttt gtcggtgcga tgggtaaatc
    12541 ggcacaattc ccgctgcatg tctggctgcc cgattcgatg gaaggcccga ccccgatttc
    12601 cgcattgatt cacgccgcaa ccatggttac cgccggtctg ttcatggtat cgcgtatgtc
    12661 gccgatttat gagatgagca gcactgcgct gtctgtcatc atggtaatcg gtgcgattac
    12721 tgctctgttt atgggtttct tgggcgtgat tcaaaacgac atcaaacgtg tggttgcgta
    12781 ttccaccctg tcgcaactgg gctacatgac cgtggctctg ggcgcgtctg cctattccgt
    12841 ggcgatgttc catgtgatga cccacgcctt ctttaaagcc ttgctgttct tggcggcggg
    12901 cagcgcgatt atcggtatgc accatgacca agatatgcgc cacatgggca atctgaaaaa
    12961 atacatgccg attacttggc tgaccatgct gatcggtaac ttgtcgctga tcggtacgcc
    13021 gttcttctcc ggcttctatt ccaaagattc gattatcgaa gcggcgaaat acagcaccct
    13081 gccgggcagc ggctttgcct attttgccgt cctcgccagc gtttttgtta ctgcgttcta
    13141 cgcattccgc caatacttta tggtgttcca cggcgaagag aaatggcgca gcttgcctga
    13201 acatcatgac gatcatcatg gcgaagaaca tcacagcttg ggcaaaaacg acaatccgca
    13261 cgaaagcccg ttggttgtta ccctgccttt gattttgctt gccattccgt ccgtcatcat
    13321 cggctacctt gccatcgagc ctatgcttta cggcgatttc ttcaaagatg tgattttcgt
    13381 caataccgac gcgcatccga ccatgcacat catgaaggaa gagttccacg gcgcattggc
    13441 aatggtgtcg cacagcctgc attcgcccgt actctacctt gctatcgcag gcgtgttgag
    13501 cgcatggctt ttgtacgtca aactgccgca cctgccagcg aaaattgcac agacgttccg
    13561 tccgatttac gttttgtttg aaaacaaata ctacctcgac gccctgtatt tcaacgtttt
    13621 cgccaaaggc acacgcgcat tgggtacctt cttctggaaa gtcggcgata ccgccattat
    13681 cgataacggc atcgtcaacg gctctgccaa actggtcggc gcgattgccg cgcaagtgcg
    13741 taaagcccaa accggcttta tctacaccta cgccgccgct atggtattcg gcgtattggt
    13801 actgctcggc atgaccttct ggggattgtt cagataaagg cggagtttca gacgacctgt
    13861 tcatagtttt gtagaggtcg tctgaaaagt ttgagaagtg ggcattaagt caaagggtgg
    13921 aacaaaatgg tacccaacag gcgtgaaata gccaacatgc aaattatctg tttcctaaat
    13981 tttttaggca atctcaacaa atatagagga gtcaaaaggg atgacacagt tatttttaca
    14041 ttcagataca ccaaatgaga aggaactgat ttcaatatat gagaaagctg tttcagaggc
    14101 agtagagctg tatattttct ctgcgtatct cactcattgg gatgtaaaaa ataagctcaa
    14161 tagcaaattg caagagttta aatttatttt tggacaagat ttcggattgt ctaaaaaaga
    14221 ggctattcgg aaagtgttga aatggcttcc gtcccatttg aaattcacac tgatggtagc
    14281 tcaaggcatt cagggttttc atcctaaagc tgtattttgg aagaatgata agaatgaata
    14341 ttatgcttta atcggttctt caaatttgac tcatgctgcg tttaatagca attatgaagc
    14401 aaatattttg actaaaattt ccgagcagga ttttataaaa gtcaaatctt gggctgatga
    14461 aattgcgatg aaatctatcc cagtatcgga agattggctt gaggagtatc aggaagctga
    14521 aattaattat aagaaatcaa ctgttagcca atcattgatg gataagttat ttatggaaat
    14581 gccaaattat aatcaagaac tgattgcagc acggagaaaa cagatgagaa accatcaaac
    14641 tgtgtgtaat caattaaaaa gtcttattaa gcaatgtgct gcaggaaaga tagacaatga
    14701 tgagttttat gtggaattta ataaattatg gtcttggaaa agcgaaaata aaggagaagg
    14761 ggtaggtaat cgatttcaag atcaaacgtg gaaaaggacc ggaaagtctt cagattttag
    14821 aaaattatgc attgctatcc aatcagtttt tgatgcacca cttgctgaga gagataatgt
    14881 tgttgccaag caaattgatt ggctaaaaga atgtggagtt tccactcgtg gttcagtttt
    14941 ttctgaaatg ctttgtcaag aatatccaga tagatatcca gtgttaaacg ctcctattaa
    15001 aaaattttta gaaaaaaata aatttaagtc tgcaaaagga gcaagtgaag gctctagata
    15061 tattgattta agtatgaagt taagagcttt actagcaatg cagtcagaaa taaaaaattt
    15121 ggctgaatta gatgttttag tgcaggcaga atatcgcgat agtacagata ttgattggga
    15181 gtgagtaaag aggggagaga gtattcatcc ctttttcaga cgacctcctg aaacgtcgtc
    15241 tgacaaacta acccgcacta cgatattttt attttaacca caggttaacc actatgtttt
    15301 ccaactacct actcagcttg gcaatatgga tacccatcgc cgcaggtgtg ctggttttgt
    15361 cgaccggtaa ggacagccgt gcgccgctgg cgcgtgtgct tgcctttatg ggtgcgcttg
    15421 ccggtttctt ggtaacgctg cccctgttta ccggtttcga ccgtttgagc ggcggctatc
    15481 aatttaccga gttccacgag tggattccgc tgctgaaaat caactatgca ttgggcgtgg
    15541 acggtatttc agtgctcttt atcatcttga atgcgtttat tacgctgctg gtggtattgg
    15601 ccggttggga agtcattcag aaacgtccgg cgcagtatat ggccgctttc ctgatgatgt
    15661 cgggtttgat taacggcgcg tttgccgctc aggatgcgat tctgttttat gtgttctttg
    15721 agggtatgct gattccgctg tacctgatta tcggtgtatg gggcggcccg cgccgcgtct
    15781 atgcgtcggt caagctgttc ctctatacgc tgatgggttc actcttgatg ctggttgcca
    15841 tggtttacct gtactatcaa acaggcagct tctctattgt cgatttccaa aacatcaaac
    15901 agattccgtt gggcgtacag cagcttttgt ttgtggcatt cttcctgtca tttgccgtaa
    15961 aagtgccgat gttccccgta cacacttggc tgccggatgc ccacgttgaa gcaccgaccg
    16021 gcggttcgat ggtgttggct gcgattacgc tgaaactggg tgcgtatggt ttcttgcgct
    16081 ttatcctgcc gattatgccg gatgcggcac gctattttgc ccccgtgatc atcgtattga
    16141 gtctgattgc cgtgatttat atcggtatgg tggctttggt gcaaaccgat atgaaaaaac
    16201 tggtggcgta ttcgtccatc agccatatgg gttttgtaac gcttgggatg tttttgtttg
    16261 ttgacgggca gttggacgac tgggcattga aaggcgcggt cattcagatg atttcgcacg
    16321 gtttcgtgtc ggcggcgatg tttatgtgca tcggtgtgat gtacgaccgc ctgcacacgc
    16381 gcaatatcgc cgattacggc ggcgtggtca acgtgatgcc caagtttgcg gcgtttatga
    16441 tgttgttcgg tatggcgaac gccggtttgc cggcgacttc cggcttcgtg ggcgagttta
    16501 tggtgattat gggcgcggtt aaagtgaatt tctgggtggg cgcgttggcg gctatgacgc
    16561 tgatttacgg cgcgtcttat accctgtgga tgtacaaacg cgtgattttc ggcgagattc
    16621 gcaatccgca cgttgccgat atgaaagaca tcaattgccg cgaatttgcg gttttggcgg
    16681 ttttggcggc ggctgttttg ggtatgggcc tgtatccgaa cgcgtttatc gaagtggtac
    16741 atcaggcggc aaacgatttg attgcccatg tggcacaaag caagatttga ggtgtgtaaa
    16801 tgaactggtc tgatttgaat ttaatgcccg ccatgcccga aatcgtgctg ctgtcgctgc
    16861 tggtgttatt gttgctggca gacttgtggg tcagtgatga caaacgccgt tggacgcatt
    16921 acggcgcgtt ggcaacggtg gcggttacgg ctgtggtgca gcttgccgtt tgggaacagg
    16981 gcagcacgtc ttcgttcaac ggcatgtata ttgcagacgg tatgtcgcgt ttggcaaaaa
    17041 tggttttata tgccttgacc tttgccctgt ttgtctatgc caggccctac aaccaagtgc
    17101 gcggtatttt caaaggcgag ttttacaccc tgtcgctgtt tgccctcttg ggtatgggcg
    17161 tgatggtgag cgcggggcat tttttaactg cctatatcgg tttggaactc ttgtcgcttg
    17221 ccctttacgc cctgattgcc ctgcgccgcg attccggctt tgccgccgaa gccgccttga
    17281 aatattttgt tctaggcgcg ctggcatccg gcctgctgct ctacggtatt tctatggttt
    17341 acggcgcaac cggttcgctg gaatttgccg gcgtgcttgc ctcttccttc aatgaagaag
    17401 ccaacgaatg gctgttgaaa ctgggtctgg tgtttatcgt cgtcgccgtt gggttcaaac
    17461 tcggcgcggt accgttccat atgtgggtgc ccgacgtgta tcacggcgcg cccacttctg
    17521 ttaccgccct agtcggcact gccccgaaag tcgccgccgt cgttttcgct ttccgcatcc
    17581 tcgttaccgg gctgggaacc gtgcatcatg actggtctct gatgtttgcc ctgcttgccg
    17641 ccgcctcgct gctggtcggc aaccttgccg ccatcatgca gaccaatatc aaacgtatgc
    17701 tcgcctattc caccgtatcg catatgggtt tcatcctgtt ggcgtttatg gcgggcgcgg
    17761 tcggctttgc ggcgggtctc tattacgcca ttacctacgc gctgatggcg gcggcagggt
    17821 tcggcgtgtt gatggtgttg tcggatgggg acaacgagtg cgaaaacatc agcgatttgg
    17881 cagggctgaa ccaacaccgc gtatggcttg cctttttgat gttactggtt atgttctcta
    17941 tggcgggcat tccgccgctg atgggttttt acgccaaatt tggcgtgatt atggcactct
    18001 taaaacaagg ctatgtttgg ttgtcggtgt ttgccgtcgt gatgtcgctg attggcgcgt
    18061 tctactacct gcgcgtggtc aaagtcatgt attttgacga atccggccgc gcccgtctcg
    18121 ccgccggcgg caacaatgcc gcaaaattcc tcttgagcgt caacgcgctg ctgttggtgc
    18181 tgtggggcat tatgccgcaa accgttatcg actggtgcgc caaggcgttg gaaaacacgc
    18241 tgtaagccgc cgcaacggca gccgtgtcag aggctgccgt ttttgttaag atatgccgtt
    18301 ccgcaatgca gttcagacgg catcgccgcc gacaacgccc aaacagaaag cccaccatga
    18361 ccgcatccat gtacatcctt ttggtcttgg cactcatctt tgccaacgcc cccttcctca
    18421 cgaccagact gttcggcgtg gccgcgctca agcgcaaaca tttcggacac cacttgatcg
    18481 agctggcggc aggtttcgcg ctgaccgccg ttcttgccta catcctcgaa tcccgtgcgg
    18541 gagcggtaca caatcagggt tgggagttct acgccaccgt cgtctgcctg tacctgattt
    18601 ttgcgtttcc ctgtttcgtg tggcggtatt tttggcacac gcgcaacagg gaataggcag
    18661 gcataggaat gccgtctgaa accctttcag acggcatttg tttcattcaa gtgcaggccg
    18721 gcatcgctgt gccggcacgt ttcagccggc gatatacgcc ggttttaata tttgcgggcg
    18781 actgcaaatt ctgccaactg ccgcaggcgc agggctttgt cgccgaaggg ttcgagcagc
    18841 gcgaccgctt cggcaaccag tttgtgtgcg tatgagcgcg ccgcttccaa gcccatcagt
    18901 ttcacataag tcggcttgtc gttgtctgcg tctttgcccg ccgttttgcc caaagtcgcc
    18961 gtgtccgctt cacaatccaa cacatcgtca atgacttgga acgccagccc cagttttgcc
    19021 gcataatcgt ccaataccgc cagactgtct tcagacagat tcgggcagga catcgccccc
    19081 aataaaaccg ccgcacggat tagcgcaccc gttttcaggc tgtgcatctg ttccaaatcg
    19141 gcttgaacca tttgtttgcc gacattcgcc aaatcgattg cctgaccgcc cgccatgccc
    19201 gcgctgccgc ccgctttcgc caacaccgac aacattgcca actggcgtgc tgcgggcagt
    19261 tctgtcggac ggcttaacac gtcgaaggct tgggtttgca aagcgtcgcc gaccagtagc
    19321 gcggtggctt cgtcgtattg tatatggcaa gtcggtttgc cgcgccgcag gctgtcgttg
    19381 tccatcgccg gcatatcgtc gtgaaccaaa gaatagacgt ggatcatttc gattgccgcc
    19441 attgcctgtc cgaccgcatc cgccacggct ccgcccaatt ccgaagccgc cagcaccagc
    19501 atcggacgca gacgtttgcc cccgtccaaa gccgcataac gcatggcttc gtgcagtgtg
    19561 tgcggtattt ccccctcaga cggtaaaaac cgttcaagca gcagctctgt ttgcgcctgc
    19621 gccctaagct gccatgcttt caaatcattc gtcggattca aggttcaact ccttcagccc
    19681 gtccgcatcc aaaacctgta atttctgttc gacttgtgcc agtttggttt ggcagtacct
    19741 gaccagctcg ttgccttcct gataggcggc aagcgcgtct tccaagggca tttcgccctg
    19801 catagactgc gtcagcgatt cgaggcgcga caaggcttct tcaaacgatt tcggggcgtt
    19861 tttcttcatc gtatttcctt ttcggttgaa accccgccct ttagggcggc aggatcagac
    19921 tttatttggg aggggtgtaa ccctttccaa atcagggcaa tacatagggc ggtgctttat
    19981 gtgccgtcct gtgtgttgga acatagtttc ggatgttccg gtaaaaagcg gattgtagca
    20041 tttttgaaaa acggatgccg tctgaaaccc gaatccggct tcagacggca ttttttccgc
    20101 ccaggcggca aggcgttacc cgggcagttc gtcggtgatg ccctgcaaaa aggcgaggcg
    20161 ttcggggctt gccgccccgg tttgcgcggc ggctttgaag gcgcagccgg gttcggcgcg
    20221 gtgggtgcag ttgtggaagc ggcattgccc gacaaggtgg cggaaatcgg ggaaatagcg
    20281 cggcaaatcg gcggcttgga ggtggtgtaa accaaattct tgcaaacccg gggagtcgat
    20341 gagttgggtt tcgccgttca aatcataaag ccgggcgtgg gtggtggtgt gttttcccga
    20401 gtcgagtgcg gcggaaatgt cgccggtgcg ggcggtttgg ctgcccaaaa gggcgttggt
    20461 cagggtggat ttgcccatac cgctctgccc gagcaggatg ttgctgtgcc cttgcagggc
    20521 ggggcgcagg ctgccggcgt tttccagtgc gcgggtttcg atgacgggat aacccagcgt
    20581 ttcgtagaat ttgagttttt cgcgccaaag ggcggtttcg ggcaggtcgg ctttgttcag
    20641 gacgatgacg gcttcaatac cggcggcttc ggcggcaagc agggcgcgtt gcagcagccg
    20701 cacgctcgga ctcgggacgg cggcggttac gatgaggagt tgggtaacgt tggcggcgat
    20761 gagtttggtt ttccacgcgt cttggcggta gagcaggctt tggcgcggta aaaaatcttc
    20821 aatcacaact tgttcggcgt tgacggggct gatgcggaca cggtcgccgc aggcgaaatc
    20881 gacgcgtttt ttgcgggtgc tggcttcgta ggttgtgccg tcgggcgtgc gcacgatgta
    20941 gcggcggccg tagctggcgg taatttgggc ggtgtcgttc atggtttctt tggggttggg
    21001 tgtggaaatg ccgtctgaaa acgggtgttc ggacggcatc ggttcagtcg tgctgccact
    21061 cgacgtgttc gttgaggaag ccgccgctct ggtgcgccca gagtttggcg taaagcccgc
    21121 gtttttcgag gagttcggcg tgtgtgcctt cttcgatgat gcggcctttg tcgaggacga
    21181 cgagcctgtc cattgcggcg atggtggaga ggcggtgggc gatggcgatg acggttttgc
    21241 cgtccatcat tttgtcgagg ctttcctgga tggcggcttc gacttcggaa tcgagcgcgc
    21301 tggtggcttc gtcgagcagc aggatgggcg cgtctttgag catcacgcgg gcaatggcga
    21361 tgcgctggcg ttgcccgccg gagagtttca cgccgcgttc gccgacgtgc gcgtcatagc
    21421 cgcgccgccc tttggcatcg gaaagttcgg ggatgaagcc ggcggcttcg gcgcgttcgg
    21481 cggcggaaac catttcggca tcggtcgcgt cggggcggcc gtaaataatg ttgtcgcgca
    21541 cggaacggtg cagcagcgag gtatcttgcg tgaccaaacc gatttgggcg cgtaaagatt
    21601 cttgggtaac gccgcttatg tcctgcccgt cgatcgaaac cgtgccgctt tgcggttcgt
    21661 agaagcgcaa aagcaggttg acgatggtgg atttgcccgc gccgctgcgt ccgatcaagc
    21721 cgactttttc gcccgggcgg atggtgaggt tgaagccgtt gagcagcggt ttgccggctt
    21781 cgtagcagaa atcgatgtgt tcaaatttga tttcgccttg cgacactttc agcggcaggg
    21841 cgttcggctt gtcgaggatg gtgtgcggtt tggacagggt tgccatgccg tcgccgacgg
    21901 tgccgatgtt ttcaaacagc cgcgcggatt cccacataat gtattgcgac agcccgttga
    21961 cgcgcaacgc catcgcggtg gcggtggcga ccgcgcccac gccgacctgc ccgttgtgcc
    22021 agagccagat gcccagtgcg gcggtggaga gggtcaggga ggtgttgacg atgaagctgc
    22081 acgaatgcag cagcgtcgcc agccgcattt gggcgcgcac cgtaaccata aattcttcca
    22141 tcgactgctt ggcataggcg gcttcgcgcg cgccgtggga gaagagtttg acggtggcga
    22201 tattggaata ggcatcggta atgcggccgg tcatcagcga gcgggcatcc gcctgccatg
    22261 cggcggtttg ccccaatttg ggaatcagca ggcgcatcac cgaagcgaaa ccgacaatcc
    22321 agccgataaa gggcagcagc agccatgagt cgagcgaggc gagaatcacg ccggaggtaa
    22381 tgaaatacac cgacacataa acgaccatat cggcaaccgt catcaccgcg tcgcgcaacg
    22441 ccagcgcggt ctgcatgact ttggcggaca cgcgtccggc aaattcgtcc tgataaaaac
    22501 cgaggctttg gttcagcatc aggcggtgga agttccagcg caggcgcata gggaacacgc
    22561 cctgaagggt ttgcaggcgc acgttggacg cggcatacgc ccacacgacc gaaaacacca
    22621 tcatcgccgc cattgccgcc agttcccaac ctttttcggc aaacagttcg gcgggcgcgt
    22681 atttgccgag ccactccacg attttgccca taaattgaaa aaccagggct tccataatgc
    22741 cgatgccggc ggtcagcgca gccagggcgg ctatccattt ccgcacgccg gccatgctgc
    22801 tccagacaaa ccgccacaag cctttttctg gcgttttcgg ggcggcttcg ggataagggt
    22861 cgattcggga ctcgaaccag gaaaatattt tgttcaacat tgttttcgat ttcggtaaaa
    22921 cagtttcaga cggcatcaaa cacaatgccg tctgaaagga aggacaataa cgccatttta
    22981 cgggaaaagc cgtcgggaag acagcgcgag gcggaaacgc agggtttcgt cagggcaaac
    23041 gccgcgccgc cttcagacgg cattatttca gcaggttttt caaagcaagg cgcacgcctt
    23101 cgcccacgtc cgtccctttc ggaacgcctt tgaccgccgc ttttgcttcg cgttcgctgt
    23161 aacccagtgc aagcagtgtg ctgacgatgt cttccgtttc gtcggcggcg ggtgcggcgg
    23221 caaacagccc gtccgttacc gtatgcgcga ccagcttgcc gcgcagttcc aagaccatac
    23281 gttcggcggt ttttttgccg attcccggcg cggaagacag gcgtttgaca tcttcttctg
    23341 caaccgcccg cgccagctcg tctgccgtca tcgctgacaa aatgcccaaa gccgttttcg
    23401 cgccgatgcc gccgacctta atcagttggc ggaaggtctt gcgttcttcc gcagtggcaa
    23461 aaccaaataa aagatgtgcg tcttcccgaa tgataagctg ggtaaacagt tgtacgcttt
    23521 cacccacggg cggcaggttg tagaaggtct gcatcgatac gtcggcctca tagccgacac
    23581 cgttgacatc gatgacgatt tgcggagggt ttttttcaac cagtttgccg gtcagtctgc
    23641 tgatcatgta tgaaggatcc tgaagtgtcg ggtgcaaaat gccgtctgaa accggttcgg
    23701 gcttcagacg gcacggattg tatcaaattc agtcgtcgcg gcgggaggaa atcacgcggc
    23761 cggtacgggc atcgacaacg actttgtatt cctgtccgtt tttgacgatt tcgacatcat
    23821 agtgcggacg gccgttgtcg tgttcgagat cgatgtcggt gattttgccg ccgacacgcg
    23881 ccaacgctgc tttttcggct tgggcgcggc tgatgatttt gtcttgtttg ctgtgttggt
    23941 gtgcggcgtg tccgtggtcg tcatcgccgt gtccgtcgtg gtgggcgagt gcgggggcgg
    24001 aaatgcccat cagtgcggtt gcggcggcgg tcaagagaag gtgtttgatg ttcatatttt
    24061 gcctttgtaa atcgtgggtt ggaaaatgtg gatattaata aggtatcaaa taaccgtcag
    24121 ccggcagtca ataccgcccg aaccataccg cgcgcctgag cttcggcttc ggcggcgcgt
    24181 tcctgcgagg aaaacggccc cattttgacg acatattcgt aatggcgttt ttcaaccgat
    24241 aggttcgggt ttgatgccga tgaagccagg ttttgggcgg cttggttcag ataggcttgt
    24301 gcttcgtgtt ccgtaccgaa agatttcaag tcgatgaaga tgtctttgtt ttcggcaacc
    24361 agtgcggatt ggcccgggac gatttgttcg attttgacgt gcgccgtccc ttggctgaca
    24421 aagcccaatt tttgcgcggc ggctttggat acgtcgatga tgcggttgcc gtggaaggga
    24481 ccgcggtcgt tgacgcggac gatgacgctt ttgccgtttt tggtattggt tacgcgcaca
    24541 tagctgggga tgggcagggt tttgtgggcg gcggtaaagg cgttcatatc gtatcgttct
    24601 ccgccggaag ttttgcgccc gtgaaacctg ccgccgtacc acgaggcgtt gccggtttgc
    24661 gtgaattcgg cgacttggtt tttcggcgtg tagcgttttc cggcgacttt gtagctgcgg
    24721 ttggcggagg cgtgcagttt ttctgccttg accactgcgt cggcggatgc cgtctgaagg
    24781 gagtgtgtgc cgaatgcggc ggtgagaagg aaaagggttt ttcgggttaa agtcaaaacg
    24841 tgttccgttc ttgagttgaa gacgaatggg catcatgccc gccggatacg ttccgaaccg
    24901 ccgtacagtg cggacggcgg ttcggaatgt gtccggatag gttttcagac ggcatgaact
    24961 tgcgttcaaa cgccgcctgc gtaaccgtgt tgccgccacg cttcaaagag aatcacggca
    25021 acggtattgg aaaggttcat actccggctg ccgggctgca tcggcaggcg gattttttgc
    25081 gcggcgggca ggctgtcgag gatgtcggca ggcagtccgc gcgtttccgg cccgaacagt
    25141 aaaacatcgc ctttctgaaa cgcggtttca tcggggcgcg ccgtgccttt ggtggtcagg
    25201 gcgaaaatgc gcctgcctgc gagtgccttg aggcagtcgt cgaagttttc gtgcaccgtc
    25261 aggctggcga attcgtggta gtcgagcccg gcgcgtttca ttttggcgga atccaatggg
    25321 aagccgagcg gtttgacaag gtgcaaatcc gcgccggtat tggcgcacag gcggatgata
    25381 ttgcccgtgt tcggcgggat ttccggttgg tataaaacga tggtaaacat aaatatcaat
    25441 cacttatagg cgcgtaacct tgccacaagg cggatggggt gtcaaaaaat ttagttattt
    25501 tttcattggc gtgcgtgcca gcgtccagca gcagattcgg tttgcgcccg attttttcag
    25561 cgtctttgcc agttcgtcca gcgtcgcgcc ggtggtaaag acatcgtcga ttaacaaaat
    25621 attacagttt tccggtatcg gtgtgcggat ttcaaaggcg tttttgatgt ttcgccgccg
    25681 ttcgccgcct ttgagcgtgc tttgcggcgg gcggtggtgt cggaaaacgg tgtgtcgggg
    25741 cagtatctgc cagccgtagc gttgtgccag cagcccgacg atgctttcac tttggttgaa
    25801 cccgcgttgc agcagccgct ccctgcttag cggtacgggc aggacgaaat cgaaacattc
    25861 gtctgcaagc cggtcgggcg gattctgcat catcaggtct gccagcggct gcaccatgct
    25921 caaatcagcc aagtgcttca gcgcgtgtat catattgctg acgggcggtt cgtaatgcag
    25981 cgaagcccac atccggtcga atgcgggcgg ttttttctga cagccgccgc acaccgcgcc
    26041 gccttgaacg tgcatgaaac acagggggca gctgtttgcc gcgtcggtgc ggtatgccgc
    26101 caaatcgtcg cggcagccgg cgcagatgcc gtctgaaacg ccggacgaac cgtggcataa
    26161 tacgcaacgc ctgatagtgg gcgcgtctgc gatgcgccgc caacaagaga gaaaatccat
    26221 gcctgatgcc gtcaaaaaag tttacctgat acacggttgg ggggcgaacc gccacgtgtt
    26281 cgacgatttg atgccgcgcc tgcctgcaac gtggccggtg tccgccgtcg atttgcccgg
    26341 acacggcgac gcgcccttcg cgcaaccctt cgatattgag gcagccgccg acgctgttgc
    26401 cgcacaaatc gatacgcccg ccgacattct cggctggtcg ctcggcggat tggtcgcgct
    26461 gtatctggcg gcgcgccatc ccgacaaagt ccgttcgctc tgcctgacgg cgagtttcgc
    26521 acggctgacg gctgacgaag actatcccga agggcttgcc gcgcctgcat tgggcaaaat
    26581 ggtcggcgcg ttccgaacgg attatgccaa acatatcaaa cagtttctac aactccagct
    26641 tttgcacacg cctgatgcgg acggaatcat aggcagaatc ctgcccgatt tggcgcgctg
    26701 cggcacgccc tccgccttac aggaagcttt ggacgcggcg gaaagggcgg atgcgcggca
    26761 tttgttggac aagatagatg ttccggtact gctggtgttc ggtagcaaag acgcgattac
    26821 gccgccgcgc atgggcgagt atctgcaccg ccgtttgaaa ggcagcaggc tggttgtgat
    26881 ggaaaaggcg gcgcatgcgc cgtttttgag ccatgcggaa gcgtttgccg cgctgtaccg
    26941 cgactttgtc gaaggggttt gacatgaatc cgcaggacaa atgctggcag gttcaccgcc
    27001 atctcgccga atatgccgac caacgcctga cactcgtccg caacgcgccc aagtatatcc
    27061 tgcttgcagg tgcggatgcg gacatcagcc gcagcctgct ggcgaaacgc tatccgcagg
    27121 cggtatttga agaatatgat tcccgtgcgg attttttggc ggctgccgct gccgcccgca
    27181 aaggcggttt ttggcaaagg tttacgggta agggcgtggt gcaacactgc caatccccga
    27241 tcgcgccgct gcccgaagcg tgtgccgata tgttgtggtc gaatctcgga ctgttggcgg
    27301 cggaacaaat ccttcctgtg ctgcacaact gggcgcgcgc cttgaagacg gacgggctgc
    27361 tgttttttac ctgcttcggg cgcgacactt ttaccgaact gaaatgccgt ctgaaagaaa
    27421 acggcattga aagccgcagc gtgatgtttc ccgatatgca cgacttgggc gatatgcttg
    27481 ctgaaaacgg cttttacgac cccgttaccg atacggcgaa gctggtgttg gattacaaaa
    27541 aggcggaaac gttttgggcg gatatggaca cgctgggcgt ttggcgggcg atggcgtgga
    27601 acgatgaaaa cgccgcgcgt tcgtgtgtcg ggacaatatt tgaacgggaa ggcggtttga
    27661 gtattacgct ggaaacagtg tacggacacg ccgttaaaaa actgatgctg ccgcaagggg
    27721 agaacgtggt gcagtttttt ccgaagagat gatgtgcaga tgccgtctga agccgtttcc
    27781 aagtttcaga cggcatttgt ttgtgaaaac cgacagaact aaaggaaatg ccgatgtata
    27841 gtgaattaaa tttaaaccag tacagcgttg cctcgccttg ccgtactatt tgtactgtct
    27901 gcggcttcgc cgccttgtcc tgatttttgt taatccacta tatgctgatg ccggagacgt
    27961 atattgcgtc tataacatca gactgaagca gtacactgcc tgccaggtta cccgagttga
    28021 agaacacggt ggcaaaaaaa cacatgcgac cctgctggct ttggactggc agggcaacaa
    28081 accgcttggg gcggaggagc tggcggattt gaaaccactt tacaaagact taaagaataa
    28141 tattggaaat attgtatgaa caaaaaatta aactatattt ttatgttgga ctgtttaggg
    28201 ttggtgatat tgtttacttg tataatagct acttttgaaa gagattatgg atttaaaatt
    28261 tttactaatt ctaagaggcc tgaattttat tattggattg gaatgtttta ttatggaatt
    28321 atttcttgct ggtttgatta tcaattaatt tcaacaaagg cgaattcgta taaaagaaaa
    28381 gttaaacaat ataaaatttt ttcagtaata ttttcagttt tgatatttat ttctactata
    28441 gtaaaacttt aaattttgga gcaaaaattt atgagcgatt caattgaata tgtattggga
    28501 acgcggtctg cacatgtata aggcaagtgc tgtcgtgcca acgggatatg tacgggttgg
    28561 gaataccgcg ccgctggtcg gcgaagacac gcaacggtat gcctcttttt ggggcgacgg
    28621 ctacgacgtg taccgtcagt tgagatggca gcagataccc gaaaaacaga gaaaggcatt
    28681 caaaaaagcc gccaaaagca aaaagaccgt gatgtttgcc ggacgggaat acggcatatc
    28741 caaacagaat ttgagcgatg tttgggatga ttttgaagac gcgatggaac tgaaggcgtt
    28801 tccctgcctg tcttcgctgt ttctgaccaa atggcataaa aatctatatg atagtggatt
    28861 aacaaaaacc agtac
//
LOCUS       DBBZYD010000013        28507 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.013, whole genome shotgun sequence.
ACCESSION   DBBZYD010000013 DBBZYD010000000
VERSION     DBBZYD010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.013"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            1..149
                     /locus_tag="ACJJDL_000483"
                     /pseudo
     CDS             1..149
                     /locus_tag="ACJJDL_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(159..1268)
                     /gene="mltB"
                     /locus_tag="ACJJDL_000484"
     CDS             complement(159..1268)
                     /gene="mltB"
                     /locus_tag="ACJJDL_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HGG7573258.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKES
                     RPAFDAAAVFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKAD
                     IVKIMHRPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAV
                     IGIETNYGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGS
                     YAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILV
                     SATLAPGADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEY
                     YLGLNNFYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1177..1428)
                     /locus_tag="ACJJDL_000485"
     CDS             complement(1177..1428)
                     /locus_tag="ACJJDL_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573259.1"
                     /translation="MPLDGIFGGGRQISGGAKGNARHSAKPPIAADAAFRAAPLCRFP
                     TYPICSEHIYEKEKNTAAGNLFGGFVCLYGDGGTPAPGK"
     gene            complement(1469..2896)
                     /locus_tag="ACJJDL_000486"
     CDS             complement(1469..2896)
                     /locus_tag="ACJJDL_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HGG7573260.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDAAACLLNDIRKDILDCRYCG"
     gene            3081..7193
                     /gene="mfd"
                     /locus_tag="ACJJDL_000487"
     CDS             3081..7193
                     /gene="mfd"
                     /locus_tag="ACJJDL_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HGG7573261.1"
                     /translation="MTYPIPKPREKSRWSNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHILPDLAVNRQSDEPLQALKDFQTTFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSASATNPLPSPLPQEREQSAAVVSDSLKAAAVSTESSLPPGKSNLHGQIQQQPAPSP
                     VGEGWGEGKAVAAQTEFPASATNPLPSPLPQEREQSAAAVSDDLKAKSSLHLVASNLH
                     GQIRQQPTPSPVGEGWGEGKAVSAQTEFSAAAISPLPSPLPQEREQSAAAVSDDLKTK
                     SSLHPVASNLHGQIRQQPTPSPVGEGWGEGKAVAAQSAIAVITESDLYQYVARSRVHN
                     RRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLITMDLGGETNEMMLLEYAGE
                     AQLYVPVSQLHLISRYSGQAHENVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAR
                     RAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGF
                     GKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHTQNFADRFADFPVKVASLSRFNNSK
                     ATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRAN
                     VDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLREL
                     KRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNV
                     LLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITK
                     DAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQA
                     VRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERLVLYKRLAVCETVQQIN
                     AIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGIDAIDAAGEAVTVTFGKNNNVDPT
                     EIILLIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            7342..7725
                     /gene="panD"
                     /locus_tag="ACJJDL_000488"
     CDS             7342..7725
                     /gene="panD"
                     /locus_tag="ACJJDL_000488"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HGG7573262.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            7747..8589
                     /gene="kdsA"
                     /locus_tag="ACJJDL_000489"
     CDS             7747..8589
                     /gene="kdsA"
                     /locus_tag="ACJJDL_000489"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HGG7573263.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCTHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPYQCQPV
                     AEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEADNGKL
                     ILCERGSSFGYDNLVVDILGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            8604..9044
                     /locus_tag="ACJJDL_000490"
     CDS             8604..9044
                     /locus_tag="ACJJDL_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HGG7573264.1"
                     /translation="MMQTFRKISRYVATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAILTRLQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSMIFMATALLSAVLSWRLSGKDAV"
     gene            9092..10378
                     /gene="eno"
                     /locus_tag="ACJJDL_000491"
     CDS             9092..10378
                     /gene="eno"
                     /locus_tag="ACJJDL_000491"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HGG7573265.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            10392..10670
                     /gene="ftsB"
                     /locus_tag="ACJJDL_000492"
     CDS             10392..10670
                     /gene="ftsB"
                     /locus_tag="ACJJDL_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HGG7573266.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(10711..11001)
                     /gene="yfaE"
                     /locus_tag="ACJJDL_000493"
     CDS             complement(10711..11001)
                     /gene="yfaE"
                     /locus_tag="ACJJDL_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HGG7573267.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
     gene            complement(11199..12332)
                     /gene="nrdB"
                     /locus_tag="ACJJDL_000494"
     CDS             complement(11199..12332)
                     /gene="nrdB"
                     /locus_tag="ACJJDL_000494"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HGG7573268.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(12393..13580)
                     /locus_tag="ACJJDL_000495"
     CDS             complement(12393..13580)
                     /locus_tag="ACJJDL_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction endonuclease"
                     /protein_id="HGG7573269.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(13577..14587)
                     /gene="dcm"
                     /locus_tag="ACJJDL_000496"
     CDS             complement(13577..14587)
                     /gene="dcm"
                     /locus_tag="ACJJDL_000496"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HGG7573270.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KK"
     gene            complement(14645..16924)
                     /gene="nrdA"
                     /locus_tag="ACJJDL_000497"
     CDS             complement(14645..16924)
                     /gene="nrdA"
                     /locus_tag="ACJJDL_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HGG7573271.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAAKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            17453..17764
                     /locus_tag="ACJJDL_000498"
     CDS             17453..17764
                     /locus_tag="ACJJDL_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HGG7573272.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFHSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
     gene            complement(18076..18843)
                     /locus_tag="ACJJDL_000499"
     CDS             complement(18076..18843)
                     /locus_tag="ACJJDL_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HGG7573273.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(18931..19758)
                     /gene="mutM"
                     /locus_tag="ACJJDL_000500"
     CDS             complement(18931..19758)
                     /gene="mutM"
                     /locus_tag="ACJJDL_000500"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HGG7573274.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPYRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(19810..20475)
                     /locus_tag="ACJJDL_000501"
     CDS             complement(19810..20475)
                     /locus_tag="ACJJDL_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7573275.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGRWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRRLADAGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYALVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     VAD"
     gene            20654..22630
                     /locus_tag="ACJJDL_000502"
     CDS             20654..22630
                     /locus_tag="ACJJDL_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7573276.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASRSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            22698..23390
                     /locus_tag="ACJJDL_000503"
     CDS             22698..23390
                     /locus_tag="ACJJDL_000503"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HGG7573277.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYILLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLESPSALLLIITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKL"
     gene            complement(23591..23697)
                     /locus_tag="ACJJDL_000504"
                     /pseudo
     CDS             complement(23591..23697)
                     /locus_tag="ACJJDL_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            24020..25335
                     /locus_tag="ACJJDL_000505"
                     /pseudo
     CDS             24020..25335
                     /locus_tag="ACJJDL_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519747.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            25349..25483
                     /locus_tag="ACJJDL_000506"
     CDS             25349..25483
                     /locus_tag="ACJJDL_000506"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573278.1"
                     /translation="MPSESHTSFRRHCVDARHNTRNARIRTGLPASVGYFRAGGVPSA
                     "
     gene            25579..26235
                     /gene="cmk"
                     /locus_tag="ACJJDL_000507"
     CDS             25579..26235
                     /gene="cmk"
                     /locus_tag="ACJJDL_000507"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HGG7573279.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVEWHDEENVSKLAKKLPAVFSGSRILLDGEDVSDGIRTEAIGMGASAVAQLP
                     KVRASLLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            26390..28075
                     /gene="rpsA"
                     /locus_tag="ACJJDL_000508"
     CDS             26390..28075
                     /gene="rpsA"
                     /locus_tag="ACJJDL_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HGG7573280.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVVALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            28086..28400
                     /locus_tag="ACJJDL_000509"
     CDS             28086..28400
                     /locus_tag="ACJJDL_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HGG7573281.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
BASE COUNT         7265 a         7880 c         6664 g         6698 t
ORIGIN      
        1 atgcaaaaat gccgtccgaa ccgaaacgtg gttcagacgg cattttatag tggattaaca
       61 aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtacggcaa ggcaaggcaa
      121 cgccgtactg gtttaaattt aatccactat aaaaaacatt acaatcccgg gccgccaagc
      181 gaattggcaa tgtccctgac cgccgttaca tacatccgac tgtgattgta ctgccatacc
      241 gtataaaaat tgttcaagcc caaataatat tcaaacacgc cgggtgcggt ttccagtttg
      301 aacaaaaccg ccttttcatc atctgcaagc tcttcgccgg ggatgatgcc gtacgccttt
      361 aaatccgcca ccgtccgcgt cagggcggtt ttttcgccaa tgattgcctg aacatccgca
      421 cccggcgcca atgttgcaga caccagtatt ttcccgcccg tgcgccaacc gtgctgcttc
      481 atataattgg caaccgatgc cgcgacatcg ccgatgttgc cccatatgtc ccgatgtccg
      541 tccccgtcat aatccaccgc ccatttccgg tagctcgaag gcataaattg cggcatcccc
      601 attgcgcccg catagctgcc tttaaaggcg aaaacatcgc cgccttcttc ttttgccagc
      661 tttaaaagct cgaccaattc tttttggaaa aacccggcgc ggcgggggta atcaaagcct
      721 aaggtcgcca atgcgtccgc cacacggaaa ctgcccgtat ttttgccgta attcgtttca
      781 atcccgataa ccgccacgat aagttcggca ggcacgccgt atttttgcgc cacatcatcg
      841 ataagcgcgc ggttttccgc ataaaaccgg cgcgcgccgc gaaatttcgc cttgcccgaa
      901 tttcccgtgc ggaacacata ccacggacgc gatgtggagg ggcggtgcat aatcttgacg
      961 atgtccgcct tgtaagccgc tttgtcaaaa aaatcctgcc attccgcccg ggaaaaatcc
     1021 cctttcccga cttcatcgtc cacaaaacgg cggacatttg cattggcggc aaacccgctg
     1081 tcggataccg gtacggctgc cgcgtcaaat acggctgccg cgtcaaacgc ggggcggctt
     1141 tcttttttca tttcatccgc gcggggggct tgggcttcat ttgcccgggg cgggcgtgcc
     1201 tccatcgccg tacaggcaga caaagccgcc aaacaaattg ccagcggcag tatttttctc
     1261 tttttcataa atatgttccg aacaaatagg gtaagtggga aagcggcaca agggggcggc
     1321 gcgaaatgcg gcatccgccg caatcggcgg ctttgcggaa tgccgcgcgt tgccttttgc
     1381 gccgcccgaa atctgcctgc cgccgccgaa aatgccgtct aaaggcactt cccctttcag
     1441 acggcattgc ctgcgccgta tttgcccgct atccgcaata tcggcagtcc aatatgtctt
     1501 tgcggatatc gttcagcagg caggctgccg cgtcttcgtg ttccgcctgt acgaagacaa
     1561 agagtcgggc gatgattttg ccgataaaga ctttttgcag ggcgcaggcg tcggtcagcg
     1621 tgtgttcctg caggaagctg cggatgtctt cgggtaaggt gtaatcacgg gcaacggcgg
     1681 caaagcgggc atcggtttgc aggcggtcga gcagggtttg gtttttgtcc aacttcatgc
     1741 ctgcttcttt ttcttcggcg gtggcgcgga caaactggtc gtaaatttcg gcataaagca
     1801 tatcgttcgg gccttcaaaa atcgtgaagg ggcggatgtc gatagcgata ttgccggcgg
     1861 tgtgtccgcg ttcaaaaccc ttcgcgccca agagtttttg caacatttgc gcggcggcgt
     1921 aagtgtattc cgtggcgagg gttttgacga tgttcgcctc catcagctga tgggcgacgg
     1981 gggcaacagg cgaaacggaa tggcagacgt agcggtaaag aatctcggaa acctgatggc
     2041 ggcgccggat ttcgcggcgt tcgtaatcga cgaatctgat gtcgttgcgg acgtatcgtt
     2101 ccaggttttc aaggatgtat tccataatgc cgtgcgtcat gccgatcagt tgcaggcggc
     2161 tgcggataaa gatgttttgg aacgcgcgca aaccggcagc gtcgctctgg gagagtttca
     2221 tcacggcggt tgcaggcatt tcggcatcga tgcggttgac ggcgtaacgg acggcgcgca
     2281 agccttcgga tgcgagggtt tcgcagcgga tgtatgtttt ggggacgagc agcaggtcga
     2341 tgactttggc gagtttgccg tttttgcgtt ctttggcggc aacgaggagg aagtcgcttt
     2401 gcgagttgcc ctgccagtat tttgcggcgt tgacgtaaat ggtttgtccg tcggtatatt
     2461 cgtagtaaga ctgcatttct cgggcaatcg ccgcgccgga ggtttcgggt tcggtaacgc
     2521 ccaaaccacc gccctcgcct ttgaaaacca tgtccaaacc ctgtgcgatt tgcgcttcat
     2581 cgccgaactc ttgcagtggc tgcaacacca gcgcgccttc gatgccggta cgcagcgtaa
     2641 cgggcacgcc gtaatgcccc gcaatccgca agacttcctg aatttcaaac tggctgccct
     2701 tgcgcccgcc gtgttttttg tcgaggaagg gcaacagcaa acccgcctgc ttcaaggcaa
     2761 gccatttgtc ttcgggcagg tatcgcatca ggtcgatacc gtctgaaaaa atgcggcgga
     2821 atgcggattc gatgtgcttt aaaaaagcag ccgtgtccat agttgacggc tgcgcgctcg
     2881 gttcggtgtg tatcatcggc ttcctctgtc ggttcccatt aatcggcggc cggtcaaacc
     2941 gcctgccaca gtttagagtt gattttctaa actttaccac aaagtgcgcc gggcaacaat
     3001 ccgccgacct ttcagacggc atcgcgcccc ctcccgtgct aaaatgaccg tttgcatcac
     3061 tgtccgccga ttgccgcact atgacctacc ccatccccaa accccgtgaa aaatcccgtt
     3121 ggtccaatct ttcgcaaggc tcgctgccct tggctttggc gcgttatctg ccgcataagc
     3181 ggctcaaggt cgtgctgacc caagatgcgg aacaggcgct acgccttcag acggcatggc
     3241 ggtttttccg tccgcacgac acggcggtgt tcctgccgga ctgggaaacg ctgccttacg
     3301 agcgtttttc gccgcatcag gatttggtgt cggaacggct gtcggcgttg tggcagatta
     3361 agagcggcgc ggcggacgtg ttgttcgtgc cggttgccac ggcgatgcag aagctgccgc
     3421 ccgtgccgtt tctggcaggg cgcacgtttt ggctgaaaac agggcagact ttggatatag
     3481 gccgtctgaa aaccgatttg gtagatgcgg gctacaacca tgtttcccat gttgttgcgg
     3541 cgggcgagtt tgccgtgcgc ggcggcattg tcgatttgtt ccccatgggc agcgaaatgc
     3601 cctaccgcat cgatttgttt gacgatgaaa tcgacagcat caaaaccttt gatacggaca
     3661 cgcagcgcac catctccccc gtttccgaaa tccgcctgct gccggcgcac gaattcccca
     3721 ccgacagcga ggcgcaaaaa atcttccgca gccgcttccg cgaggaagtc gacggtaatc
     3781 cgaacgatgc cgccgtgtac aaagccgtca gcaacggcca cttcggtgcg ggcgtggaat
     3841 attacctgcc gctgtttttt gaaaacgagc tggaaacgct gtttgactat atcggcgagg
     3901 atgcgctgtt tgtctctttg ggcgatgttc acgccgaggc aaaccgcttt tggagcgacg
     3961 tcaaatcgcg ttacgccatg gcgcagggcg atgaaactta tccgcctttg cttccacagc
     4021 atttgtatct ctctgccgat gtattcgcag gccgtctgaa aaactacgga caagtgctgc
     4081 ccgatgtttc cggcaaggaa cacatcctgc ccgaccttgc cgtcaaccgc caatccgacg
     4141 agccgttgca ggcattgaag gattttcaga cgacctttga cgggcggatt ttgctgtgcg
     4201 ccgaaagctt gggacggcgc gaaaccatgc tcggtttctt gcagcaaaac ggtttgaaag
     4261 ccaaacctgt gtccgactgg cagggcttct tgtcggcgca tgagccgctg atgattacag
     4321 tggcgccgtt ggcttacggg tttaaactgg gcggactgca atcgccgaac caacagcaaa
     4381 ctacttccgc ctccgaagga gaaggcgatg cggttaccga ccaaaccgaa ttttccgcat
     4441 ccgcaacaaa ccctctccct agccctctcc cacaggagag ggaacaaagt gcagccgtcg
     4501 tttcagacag tctgaaagca gccgccgttt caaccgaaag cagcctgccc cccggtaaaa
     4561 gtaatctgca cgggcaaatc caacagcaac ctgccccctc ccccgtgggg gagggttggg
     4621 gagagggcaa agcagttgcc gctcaaaccg aatttcccgc atccgcaaca aaccctctcc
     4681 ctagccctct cccacaggag agggaacaaa gtgcagccgc cgtttcagac gacctgaaag
     4741 ccaaaagcag cctgcatctc gtcgcaagta atctgcacgg gcaaatccga cagcaaccta
     4801 ctccctcccc cgtgggggag ggttggggag agggcaaagc agtttccgct caaactgaat
     4861 tttccgcagc cgcaataagc cctctcccta gccctctccc gcaggagagg gaacaaagtg
     4921 ccgccgccgt ttcagacgac ctgaaaacca aaagcagcct gcatcccgtc gcaagtaatc
     4981 tgcacgggca aatccgacag caacctactc cctcccccgt gggggagggt tggggagagg
     5041 gcaaagcagt tgccgctcaa agtgccatcg ccgtcatcac cgaatccgat ctctaccaat
     5101 acgtcgcccg ttcgcgcgtc cacaaccgcc gcaagaaaca cgccgccgtt tcagacggtc
     5161 tgttgcgcga ccttgccgaa atcaacatcg gcgaccccgt cgttcacgaa gaacacggca
     5221 tcgggcggta tatgggcttg atcacaatgg atttgggcgg cgaaaccaac gaaatgatgt
     5281 tgcttgaata tgcaggcgaa gcgcagcttt atgtgcctgt ttcgcaactg catttaatca
     5341 gccgctactc cggtcaggcg catgaaaacg tcgccctgca caagctcggc agcggcgcgt
     5401 ggaacaaagc gaaacgcaaa gccgccgaaa aagcgcgcga taccgccgcc gagttgctta
     5461 acctttacgc ccgacgcgct gcccaatcgg gacacaagtt tgaaatcaac gagttggatt
     5521 atcaggcgtt tgccgacggc ttcggctacg aagaaaccga agaccaggca gccgccatcg
     5581 ccgccgtgat taaagatttg acgcaggcga agccgatgga ccgcctcgtg tgcggcgatg
     5641 tcggtttcgg caaaaccgaa gtcgccctgc gcgccgcgtt tgtggcggta atgggtggca
     5701 aacaagttgc cgtactcgca ccgaccacgc ttctggtcga gcagcacacg caaaattttg
     5761 ccgaccgctt cgccgatttc cccgtgaaag tcgccagcct ttcgcgtttc aacaacagca
     5821 aagccaccaa agccgcgctg gaaggcatgg cggacggcac ggtcgacatc gttatcggca
     5881 cgcacaaact ggtgcaggac gacatcaaat tcaaaaactt aggtttagtg attatcgacg
     5941 aagaacaccg cttcggtgtg cgccaaaaag agcagctcaa acgcctgcgt gccaatgtcg
     6001 acatcctcac catgaccgcc acgccgattc cgcgtacttt aagtatggcg ttggaaggac
     6061 tgcgcgactt ctcgctgatt accaccgcgc ccagccgccg cctcgccgtc aaaacctttg
     6121 tcaaaccctt tagcgaaggc agcgtgcgcg aagccgtgtt gcgcgaactc aaacgcggag
     6181 gacaggtatt tttcctgcac aatgaagtag atacgattga aaatatgcgc gagcggctgg
     6241 aaaccctgct gcccgaagcc cgcatcggcg tggcgcacgg acaactgcgc gagcgcgagc
     6301 tggaacaagt catgcgcgac tttttacagc aacgattcaa cgtgttgctc tgttccacca
     6361 tcatcgaaac cggtatcgac attcccaacg ccaacaccat catcatcaac cgcgccgaca
     6421 aattcggact ggcgcaactg caccagcttc gcgggcgcgt cggacgcagc caccaccaag
     6481 cctacgccta cctgctcacg cccgaataca tcaccaaaga cgcagaaaaa cgcctcgacg
     6541 ccatcgcggc agcagacgaa ctcggcgcag gtttcaccct cgccatgcag gatttggaaa
     6601 tccgcggcgc aggcgaaatc ctcggcgaag ggcagtccgg cgaaatgata caggtcggct
     6661 tcacgctcta caccgaaatg ctcaaacaag ccgtgcgcga tctcaaaaaa ggccgccaac
     6721 ccgacctcga cgcgccgctg ggcatcacca ccgaaatcaa actgcacagc cccgccctac
     6781 tgcccgaaag ctactgcccc gacatccacg agcgtctcgt cctctacaaa cgcctcgccg
     6841 tctgcgaaac cgtgcagcaa atcaacgcca tacacgaaga actcgtcgac cgcttcggcc
     6901 tgcccgaaca acccgtcaaa acccttatcg aaagccacca cctgcggctt atggcaaaag
     6961 aattgggtat cgatgccatt gatgcggccg gcgaagcggt aacggtaacc ttcggtaaaa
     7021 acaataatgt cgatccaacc gaaatcatcc tgctgattca gaacgacaaa aaataccgcc
     7081 ttgccggcgc cgataagctg cggtttaccg cagagatgga aaatatcgag gtcagaatca
     7141 acaccgtaaa aaacgtttta aaaaccttgc aaaacagatg cctgcccaaa taaagccgac
     7201 accgcaatgc cgtctgaaac accgttttcc ttgtccgaaa gccgccatta tgaatttgaa
     7261 ggaaactcca ctataatacg gcattcagat ttccagacgg catcgcgccc gtcagaccgc
     7321 acacaaacca aaaggaaata catgttccgt actatgcttg gcggaaaaat ccaccgcgcc
     7381 accgtaaccg aagccgattt gaactacgtc ggcagcatta ccgtcgatca agatctgtta
     7441 gacgcggcag gcatctaccc caacgaaaaa gtcgccatcg tcaacaacaa caacggcgaa
     7501 cgttttgaaa cctataccat ttcaggtaaa cgcggcagcg gcgtgatttg tctgaacggt
     7561 gctgcggcaa ggctggtgca gaaaggcgat atcgtcatca tcatgtctta cgtccaactc
     7621 tccgaacccg aaatcgccgc gcatgaaccc aaagtcgtct tggtagacgg aaacaacaaa
     7681 atccgcgaca tcatctccta cgagccgccg cacaccgtgc tgtaaccctg aaaacggaca
     7741 ttgatcatgg atattaaaat taacggcatt accgtcggta acgatgctcc tttcgtactg
     7801 ttcggcggca tcaacgtttt agaagatttg gattccaccc tccaaacctg tacgcattac
     7861 gtcgaagtta cccgaaaact cggtattccc tatatcttta aagcatcttt cgacaaggca
     7921 aaccgttcct ccatccattc ttatcgcggc gtaggcttgg aagaaggctt aaagattttt
     7981 gaaaaagtca aagcggaatt cggcatcccc gtcattaccg acgtacacga accctatcag
     8041 tgccaacccg tcgccgaagt gtgcgatgtc atccagcttc ccgcattcct tgcgcggcag
     8101 accgatttag tggttgccat ggcaaaaacc ggcaacgtcg tcaacatcaa aaaacctcag
     8161 ttcctcagcc cctctcaaat gaaaaacatt gtggaaaaat tccacgaagc cgacaacggg
     8221 aaactgattt tatgcgaacg cggcagcagc ttcggctacg acaacctcgt tgtcgatata
     8281 ctcggtttcg gcgtgatgaa acagacttgc ggcaacctgc cggttatttt cgacgttacc
     8341 cattccctgc aaacccgcga tgccggttct gccgcatccg gcggtcgtcg cgcacaggct
     8401 ttggatttgg cacttgcagg catggcaacc cgccttgccg gtctgttcct cgaatcgcac
     8461 cccgatccga aactggcaaa atgcgacggc cccagcgcgc tgccgctgca ccttttagaa
     8521 gattttttaa tccgcatcaa agcattggac gatttaatca aatcacaacc gattttaaca
     8581 atcgagtaac acggtttcgc cttatgatgc agactttccg aaaaatcagc cggtatgtcg
     8641 caaccttgtg gctcggtatg cagattatgg cgggttatat cgccgcaccg gtgctgttca
     8701 aaatgctgcc caaaatgcag gcgggcgaaa ttgccggcgt attgttcgac atcctctctt
     8761 ggagcgggct tgccgtttgg ggcgcggtgt tggctgccgc ctttgccatc ctgacccgac
     8821 tgcaaaccgc cctgctgctt tttttattgt ccgcccttgc cgccaaccaa tttttggtta
     8881 cccccgttat cgaggcactg aaatacgggc atgaaaattg gctgttgtcg tttgtaggcg
     8941 gatccttcgg aatgtggcac ggtatttcca gcatgatttt catggcaacc gccctacttt
     9001 cagcagtttt aagttggcgg ctttccggca aagatgccgt ctgaagccct cccatttttt
     9061 tacctccctt cacttcactt ggagaacatt catgagcgca atcgttgata ttttcgcccg
     9121 cgaaattttg gactcacgcg gcaaccccac agtcgagtgt gatgtattgc tcgaatccgg
     9181 cgtaatggga cgcgcagccg taccgagcgg cgcgtccacc ggtcaaaaag aggctttgga
     9241 acttcgcgac ggcgacaaat cccgttattc gggcaagggc gtattgaagg cggtcgaaca
     9301 cgtcaacaac caaatcgccc aagccctcat tggtatcgat gccaacgagc aatcttatat
     9361 cgaccaaatc atgatcgaat tggacggtac tgaaaacaaa ggcaatttgg gtgcgaatgc
     9421 gactttggcg gtttctatgg cggttgcacg cgccgctgcc gaagactcag gcctgccgct
     9481 ttaccgctac ttgggcggcg caggcccgat gtccctgccc gtaccgatga tgaacgtcat
     9541 caacggcggc gaacacgcca acaacagcct gaacatccaa gagtttatga ttatgcccgt
     9601 cggcgcaaaa tctttccgcg aagcgttgcg ctgcggtgcg gaaattttcc acgccttgaa
     9661 aaaactgtgc gacagcaaag gcttcccgac cacagtcggc gacgaaggcg gtttcgcccc
     9721 caacctgaac agccacaaag aagccctgca actgatggtc gaggcgaccg aagccgccgg
     9781 ctacaaagcg ggcgaagacg tattattcgc attggactgc gcctccagcg agttctacaa
     9841 agacggcaaa taccacttgg aagccgaagg ccgctcctac accaacgcgg aatttgccga
     9901 atatctggaa agtctggtca acgagttccc catcatctcc atcgaagacg gcatggatga
     9961 aaacgactgg gaaggctgga aactgctgac cgaaaaactg ggcggcaaag tccaactcgt
    10021 tggcgacgac ctcttcgtta ccaacccgaa aatccttgcc gaaggcattg aaaaaggcgt
    10081 ggcaaacgca ctattggtca aagtcaacca aatcggtact ttgagtgaaa ccctgaaagc
    10141 cgtcgatctg gcaaaacgca accgctacgc cagcgtgatg agccaccgct ccggcgaaac
    10201 cgaagacagc accattgccg acttggcagt cgccaccaac tgtatgcaga tcaaaaccgg
    10261 ttctttgagc cgttccgacc gcatggcgaa atacaaccaa ctgctgcgta tcgaggaaga
    10321 attggcggaa gccgccgact accccggcaa agccgcattc taccaactgg gcaaataaaa
    10381 aaggttaagg tatgaagtgg gtaactgtcg ttttatcctt cgcacttgtc tgttgccaat
    10441 acagcctctg gttcggcaaa ggcagcatcg gacgcaacag cagtctgaga gaacagattg
    10501 ccgttcaaga agaaaaaaac cagacactcg ccctacgcaa tcattccctt gccgccgaag
    10561 tctatgattt ggaaaacggt caagaagcca tttcggaaat cgcccgggta gaactgggtt
    10621 atatccaaga cggtgaaacc ttttaccgac tcatcaggca taaccggtaa taccgtcaaa
    10681 aagccgtccg aaccaatgtt cggacggctt ttatttcaac aaactgtcag acagcccctc
    10741 atcctccccc gacaaaccgc aatccagcct gacatccccc tcgacgcaac agcagcacgg
    10801 cagtatctcg tcccgcccca aaaaagccaa aggcggctcc cgataagtaa cgcttccctc
    10861 caaaatcttc actcggcacg atccgcaata tccgcttcgg cactgatatt ccaccatatg
    10921 ccccgtccgt tccaagcctt ccaacagggt ctcgccctcc aagagctcaa aaaaaccctt
    10981 attcgtacca atgcgcgcca tttccgacca atcaaaaata tagtggatta aatttaaacc
    11041 agtacggcgt tgcctcgcct tgtccggatt tttgttaatc cactataatc cactataaaa
    11101 ggaacaataa ccgatcctac ccgctgtttt tcccatcata caacatacaa atgccgtctg
    11161 aaacatccgg cttcagacgg cattttttca aaaaacattt acaactcaaa atcgcccaaa
    11221 tcatccgtat tcacttcaga atctatctga ccgatcaaat aagaggatat ttccacttcc
    11281 tgcggcgcga cctgtacgtt gtcggacgac agccacgcat taatccacgg aatcgggttt
    11341 tgatttgcgc cttcaaatcc ggccggcaac cccaccgcct gcatacgcag attggtaata
    11401 tattcgacgt attgggataa gatttctttg ttcaaaccga tcatcgaacc gtccttaaac
    11461 aaatatgccg cccattcttt ttcctgttcc gccgcttttt tgaagagttg gaaacattcg
    11521 tcctgcaact cggcggcaat ttccgccatt tcagaatcat caacaccaga acgcatcaga
    11581 ttaagcatat gctgcgtgcc ggtcaggtgc agggcttcgt cgcgggcaat cagtttgatg
    11641 attttggcgt tgccttccat caactcgcgc tcggcaaaag caaacgagca ggcgaatgaa
    11701 acgtagaaac ggatggcttc caacacattg acgcacatca ggcagagata gagttttttc
    11761 ttcaacccgc gcaaagacac ggtaacgggt ttgccgccga cattgtgcac cccttcgccc
    11821 aacaggttgt aatactgggt gtattcgatt aagtcatcgt aatagcaggc aatgtcttcg
    11881 gcgcgggcgg taatgtattc gttttcgaca atatcatcaa acacgaccga cggatcattc
    11941 acaatattgc ggatgatgtg ggtatagctg cgcgagtgga tggtttcgct gaagctccac
    12001 gtttcaatcc acgtttccaa ctcgggaatc gaaaccaaag gcagcaaagc aacattcgga
    12061 ctgcgccctt ggatggaatc gagcagtgtt tggtatttca gattgctgat gaaaatatgt
    12121 ttttcgtgtt ctggcaggtt ggcgtagtcg atacggtcgc gcgacacgtc gatttcttcc
    12181 ggccgccaaa aaaacgacaa ttgtttttca atcagttttt caaatacctc gtatttctgc
    12241 tggtcataac gggcgacatt aaccggctga ccgaaaaaca tcggctcatt cagcgcgtcg
    12301 tttttggttt tgggaaaggt gctgtatgac atagttaagt gttcgcagga cataatctat
    12361 tctctatatt aattaaaaat gatctgtaag ttttaactaa cctgctgaga ctttatatat
    12421 ttaataaaat tttctaaagt taaaacatgg gttttcccaa aagttccaaa tgtttttacg
    12481 gattctttag ggacaactaa ggttaaattc tcatcactca tttcctgaat ttgagtatca
    12541 gatatacctt cttgtagagt aaataaatgc ttatgaggaa ttcgatctgc ttcatttaaa
    12601 acttggcgcc agcgatcctt acaagtagtc tttgaaccta gcattgtcag cttttcagtt
    12661 tgaaatatga aattccctga ttcatccatc gcatggtact cttcacttcc aggaaataaa
    12721 aaatctggtt tctttttccc ttctgtcttc gcttgcgtct caaattttaa ggaaaattcg
    12781 tcaaatattc ttgataaatg taactctaaa gattttcctg ctcttgcttt tctgcgattt
    12841 gtaaaagaat gtgcaaaatt aatgaagcta tccaaatcag taatttttga tttaataatt
    12901 tcaaattcac gtttttcaaa aatggaaaat aattcatatt cctttgaaac ccattgtttt
    12961 aacacattac taacgttagt tttatttaat gcaatatttt cccttgccaa aactgccatt
    13021 tcttcagttt tggggaagtt aggaaatagt gaaaataatt ttgttaggtt atcctctact
    13081 tcttgttttt taggtaaata taaacttcct ggtaaaatgt tagtttctgc gataaatatt
    13141 tcaatatctt catctgaaga taaaacaaaa gcatggaata ataaatcttt ataacaagct
    13201 ctgcacaata ccaataagga accactatat ttatcactta aaaattcaaa attcttgcca
    13261 aaacccgtaa ttctcgcctc atttctcgtg ccttggccgt aatatttaaa attgctatta
    13321 gtgacgcttc catcttgcca attaattttg attgaaatag ttttatttgt tcccttttgg
    13381 caaactacat caaagaggtc gtctgaaaaa tgtttttgaa tataaaatcc tgattggtga
    13441 ctaccagtag taccaacatc attgggacga atataacgac agtatactgc aattgattta
    13501 tttgctgtct gtattgctga agctactaag tcatcggatt tatttactac ttgtattgtc
    13561 tgagctgcca agtcattcat ttttttaact catttataat ttgtttagca atagcttgaa
    13621 ccaacggtac agcaattgaa ttgccaaact gcttgtatgc agctgtcttg gatactgcat
    13681 caataacaaa atctttagga aatcccatta aacgcgagca ctccctaggt gtcagcttcc
    13741 taggattttt tcctttctga gggatgagta tttcggaacc atctttgtaa tatcgtgcag
    13801 atagagttcg tgatattcca tctaaatcaa ctaatccaaa accaaatcca ttaccctttg
    13861 ccttatgttt tttagcgtaa ttttgaaggt aaagccataa gttatcagaa agagtaaaag
    13921 aattatctac atcatcttcc aaaatttgct ttaattttgg ttgtgattct ggtggggaag
    13981 gaaaattgaa atttatttcc ttattaaaat attgtctatc aaaacctaca ataaaaatac
    14041 gctccctatt ttgaggaaca taatattttg cattcataac ttgataaaat atctgatagt
    14101 caagctcttc taaagtccct ttaattactt taaatgtatt tcctttgtca tgcgaaacaa
    14161 ggtttttcac attctctaaa agaaaaattt taggtcgatg ttttccaata atttcagcaa
    14221 catcaaaaaa tagagttccc tgcgccttat ctaagaagcc tgtttctcgt cctaggcttt
    14281 ttttctttga aacaccagct atagagaatg gctgacacgg gaatcctgct gttaatacat
    14341 caaacttact tggaatagct gctttggttt cctttaatgt aatatctcca taaggaatat
    14401 cattaaaatt tacttggtag gtttgacggg ctttatcatc ccattcacta gaaaatacac
    14461 atcgcccacc aacattctcc attgcaatgc gaaaaccacc tattcccgca aataaatcaa
    14521 taaaagtaaa tttctcatta tttaaggtaa ctatattatc taattgattt tgtattttat
    14581 ttttcatatt ttatatttca gatgatttat taatctaaag gccatctgaa aactccccct
    14641 ttcatcaaat cttacaagcc ccgcccgcgc agccgtcatc ctgaatatcg gtctgcgtat
    14701 cgtccgcacc gtcgcgggtg ttatggtagt acagggtttt gacgccgtat ttgtaggcgg
    14761 tcagcaggtc tttgagcatt tgtttcatag aaactttgcc gccttcgaat ttgcccgggt
    14821 cgtaggcggt attggcggaa atcgattgat cgacgaattt ttgcatcacg ccgacaagtt
    14881 tcaggtagcc ttcgttgccg ggaagctgcc acagggtttc ataggcattt ttcagggttt
    14941 caaactccgg cacgacttgt ttcaaaatgc cgtctttcga tgctttgacc gttaccaatc
    15001 cgcgcggcgg ctcgatgccg ttggtggcgt tggcgatttg agagctggtt tcagacggca
    15061 tgagcgcggt cagagtagag ttgcgcaggc cgtatttgac gatttcggca cgcaggcttt
    15121 cccagtcgta atgcaaaggc tcgccgcaga cggcatccaa atcttttttg taggtgtcga
    15181 tgggcagttt gccttgcgaa taaacggttt ggttaaagag cgtacacgca ccgtattctt
    15241 tggcaaggtt tgccgatgct ttgagcaggt aatactgtat ggcttcaaag gtacggtggg
    15301 tcagaccgag cgcggagccg tcgctgtagc ggacaccgtt tttcgccaga taataagcat
    15361 agttaatcac gccgataccg agcgaacggc ggcccatagt ggaggtacgc gcggcttcta
    15421 ccggatatcc ctgataatct aaaagtgcat cgagtgcgcg cacagtcaaa tcggcaagcc
    15481 cttccaattc gtccaggctg tttaatgcgc ccaagttgaa ggcggacagg gtacacaggg
    15541 cgatttcgcc gttcggatcg ttgatattgt ccagcggttt ggtcggcagg gcgatttcca
    15601 tacacaagtt ggactgatga acaggcgcga cgcgcggatc gaacgggctg tgcgtattgc
    15661 agtgatcgac gttttgaatg tagatgcgcc cggttccggc acgctcctgc atcagcgtgg
    15721 aaaacaggtc ggcagccgga atgatgcgct tgcggatatc agggtcttgc tcgtatttcg
    15781 tatagagccg ctcaaattcg tcttggtcgg caaaaaacgc ttcgtacaat cccggaacct
    15841 cgttgggcga aaacagcgta atgttgccgc ccttaatcag gcgggtgtac agtaggcggt
    15901 tgatttgcac accgtaatca agctggcgga tacggttgtc ttccacgccc cggttgtttt
    15961 tcaacaccag caggctttcg gcttcgatat gccacaaggg gtagaacaag gttgccgcgc
    16021 cgccgcgcac gccgccttgc gaacaggatt tgaccgccgc ctgaaacatt ttgaaaaacg
    16081 ggatgcagcc ggtatgccgc gcttcgccgc cccggatttc gctgtccaaa ccgcggatac
    16141 gtccggcatt gatgccgatg cccgcacgct gggaaacgta tttcacaatc gcgctggtag
    16201 tggcattgat ggaatccaaa ctatcgtcgc attcaatcag cacacagctt gagaactggc
    16261 gcgtaggcgt acgcacgccg ctcataatcg gggtcggcag cgatacttta aatgtggaaa
    16321 cggcatcgta aaaccgtttg acgtaatcga ggcgtgtttc tttgggatat ttgctgaaaa
    16381 gacacatcgc caccagaaca tataagaact gcggtgtttc ataaatctgg cgggtaacgc
    16441 ggttctgtac cagatatttg ccttcgagct gtttgacagc ggcataggaa aaggacatat
    16501 cgcgttcgtg gtcgatatag gcgttcagct cgtcaaattc ttcgcggctg taatcctcaa
    16561 ggatatgcct gtcgtatttt gcggcatcgg taagtttttt aacgtggtcg taaaggtgcg
    16621 gcggctcgta ctcgccgtag gctattttac gcagatggaa aatcgccaaa cgcgcggcaa
    16681 ggtattggta gtccggggta tcttccgaaa ttaaatcggc agcggctttg atgatggttt
    16741 cgtggatgtc gtcggtgcgg atgccgttgt agaactggat gtgcgatttc aactcgacct
    16801 gagatacgga aacattttcc aatccgtccg ccgcccaagt gacgacacgg tgaatcttat
    16861 ccaaatcaat ggcttctaat cttccgtctc gtttggttac tttcaaatca gtcggtgtat
    16921 tcatcgcttc ctcttccact cttgatattc aagacacggt cttttcaaat aaattaaggc
    16981 agacaatata gtggattttt ggcattttct ccagtcttga caacggttgt atttttcagt
    17041 ttcaggcaat gcgcgataaa acccgcctgt cgtatttttc ctataatatt tgttttatct
    17101 gataattctt taccgataaa aaacgggtaa attttttgcc ttttgaccgg ctccggctac
    17161 aaggcggtga aataaggatt ttccgacgaa aaaggaaagc ttcctgtttt ctgcccctgc
    17221 aaattgttaa attttgcaaa gtatgatttt gccgcgccgc cgccgacaaa ttccattttc
    17281 ttaccgattg gaatttatta ttgagattaa tgtgttattt gaatctgcat atcaaacggc
    17341 aagttttgtc ggctgaatga gtctgaaact gccgacaatt tgcccgctcc atccttccat
    17401 cctatactgg aaggaatgac aaactgaaag gatcgtcatg tctgtcaaaa agatgcttgc
    17461 catactgttg tctgcaatat tgggactggt atcgacaact gccgctgccg gtacgtcaga
    17521 acccgcccac cgcgatacca aacatatccg caaggcaaac aagcagatgc tgcaccccga
    17581 atgcaggaaa tatttggaac gccgtgccgc gtggtaccga tcgcaaggca acgtgcagga
    17641 attgcgcgaa aacaaaaagg cgcgcaaagc attccactcc ctgccttatg cggaacagaa
    17701 aatccaatgc cgggcggctt atgaggcttt cgatgatttc gacggcggca gtttccgccg
    17761 ttaatcccat ataaaatatg ccgtctgaac acaggttcag acggcatttt ccatagatac
    17821 aacaaactat ccttacgcca tttcgtttga ggtcctcccg ttgccgcagc cttaatatag
    17881 tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacagat agtacgaaac
    17941 cgattcactt ggtgcttcag caccttagag aatcgttctc tttgagctaa ggcgaggcaa
    18001 cgctgtactg gtttaaattt aatccactat acatccacaa aagcgaatca tactgccaca
    18061 ttccgacaac cggtttcaga cagcgatatc cgcatcgtcg gcgacaacgg cacggatgct
    18121 ttcttcgatt ttatctttta aagcataacg gtcttcgctt tccgccgcat ccgccacgca
    18181 aacgaaatcg acttttatcg tcaatttttt catagacacg atgcgccaca ggcaggtcgg
    18241 caaaccgaca tcggcatatg agggacgagc cgtccttttt cccgtttcgt cataataacg
    18301 cagcgcgacc gccaaaacct ttgcccccgc atcgatggcg gattggaaca gcgcggcttt
    18361 gaacggcaaa agccccaatc cggaggaagt ccgcgcttcg gggaaaaaac tgacgttttg
    18421 accgcgttgc aaggtttcgc agacggcgcg gttaatcggt tcgatgtcgc gccgcgaatt
    18481 gcggttgatg aacaccgttc ccgcgttctg ccccatcttg cccaataccg gccagctttt
    18541 gatttcctgc ttggcgataa agctgctcgg ataaaccgcg ctcatcgcga aaatatccag
    18601 ccaggacacg tggttggcgg caaccaagac accgttcgga tgttcgggtg cgggtctgcc
    18661 cacctccaat ccgatatcca aagccgccaa aacccccctg cccaactcga ttaccgcccg
    18721 attgcgcgac tcggggcaac cgccgtcaat accgcgcagg tttttcccgg ttttgaacag
    18781 ccagaccgcc aaacggcaca agcggcgcag acgtgtaaaa aatgaagctt tatttgaaga
    18841 catgagcaat tctttcccga taatcggtgt ttgttgttga aacgttcgga cggcataccg
    18901 ataaaatgcc gtctgaaacc gttttcagtc ctatttctga cagttcgggc aataaaacgt
    18961 gccgcgctgc cccaaagttt ctttcacaac caaaccgccg cactgggggc acggctgatt
    19021 gtgccgcccg tacaccgtat attcctgttg gaagtagccg cttttgccgt cgctgtccac
    19081 aaaatccctc aaggtactgc cgcccgtttc aatggcgcgc cgcaacaccg ctttgacggt
    19141 ttcaaccaaa agcgcgcact ctttcttttt caggcggttg gcaggacggt agggcgaaat
    19201 gcccgcccta aacaggctct cgttggcata aatgttgccc acaccgacca cgaccgcatt
    19261 gtccatcagg gcaagtttga ccgcgcgctt ctgcgccttc agccttgcat acagataatc
    19321 cgcacaaaat gcctccgaca aaggctccgg ccccagtttt tccaacagcg gatgatgttc
    19381 ttcgattccc tcataccaaa gtatcgcgcc gaactttctc ggatcgcggt aacgcatgac
    19441 cgtgccgtct gaaaacacaa tatcgacgtg atcgtgtctg tccggcctgc cgatacgtcc
    19501 gtccgacggc gtaaaaatcc gcaagctgcc cgacatcccc aagtgaatca gcagcacgcc
    19561 cgtttgaaag cggataagca ggtatttcgc cctcctgccg caggacaaca cctgccggcc
    19621 ggacaaaatc tcccccaaat cgggattaat ctgccagcgc agcttcaatt ggcgcaatac
    19681 cacggcttcc accgttttcc cttcaatatg cggcgcgatg ccgcgcaacg tcgtttccac
    19741 ttccggcaat tcaggcataa cccctcccga cattttttct gacagatgcc gtctgaaaga
    19801 cggccgtccc taatccgcaa cccttgccgc acccgccgca agggctttgc cgcccaaata
    19861 cccgtcccac gcgggcaggg gcgttacgcc cgccgccctt ttgaccaaaa ccaaagcgta
    19921 cactgcggca cattgcggcc accaacggtc gcccgccttt tccataaacc gccaaaagcg
    19981 tatttgcccg agcgacgaaa ccggcggcag atacaccata aatttcccaa attcaatatc
    20041 gaaaccggca tcggcaagcc gccttttcaa ctcgggcagc ggcagacaaa accgtttttc
    20101 cggcaggcgt tcgccgtcaa accaacggct gaatccccag agcgaatacg gattgaaacc
    20161 cgtcagcatc aagcgtccgc acggtttcaa tatccggtgc gcttccgaca ggatttgcga
    20221 aggaacaccg ccttcaagcg tatgcggaaa aagcagcata tccgcagaaa catccgccaa
    20281 agccatattc tccgccgaca tcgacatatc tcgcggcaca cagacaacat cttcagacag
    20341 gctcagccac ctgccgccca cctgaaccgc acacattccc gaaaaacggt atgaatccag
    20401 ataccgcccg aagaaatcct gttccaattt tgcaacatac cgccccatcg ccgtatcttc
    20461 aaaccatgca tccatattgc gtccgtttca aacagattgc ctgccgatat tctattccaa
    20521 acaggatttc tgtcaaaaaa cacatcggcc gcccatttcc gaatccgcat aaagttcctg
    20581 taaaacttga cgctttttca gtcaaacagt accatcggac gataaaatat gtttattccg
    20641 ccgaatataa atcatgtcca aactcaaaac catcgctctg accgcatcag gtctgtccgt
    20701 ttgtccgggt ttcctatacg cccaaaacac ctcatcacac caaatcggtt tggcgattat
    20761 gcgcttaaac tcttcaatac tcgacctgcc cccgacaaaa caatatttcc aatccggcag
    20821 cctgtggagc gagctgcgcc aaggcttccg gatgggcgaa gtcaatcccg aactggtacg
    20881 ccgccacgaa agcaaattca tcgcaagccg cagctatttc aacagggtca tcaaccggag
    20941 tagaccctat atgtaccata tcgccaacga agtcaaaaaa cgcaatatgc ccgccgaagc
    21001 cgccctgctt cccttcatcg aaagcgcgtt cgtcaccaaa gccaaatcac acgtcggcgc
    21061 atcaggatta tggcagttta tgcccgctac cggcaggcat tacggcctgg aaaaaacacc
    21121 ggtttacgac ggcaggcacg acgtttacgc cgccaccgat gccgcactca actatctgca
    21181 atacctctat ggactgttcg gcgactggcc gcttgccttt gccgcctaca actggggtga
    21241 aggcaacgtc ggacgcgcca tcaaccgcgc ccgcgcccaa gggctcgaac cgacctacga
    21301 aaacctgcgt atgcccaacg aaacgcgcaa ctatgtcccc aagctgctcg ccgtgcgcaa
    21361 cattattgcc actccccaat ctttcggcat gaatatcagc gacatagaca acaaacccta
    21421 ttttcaggca gtcgaaccgg atcgtccgct cgacaacgaa gccatcgccc ggcttgccgg
    21481 catcacgcaa agcgagctgc tcgccctaaa ccccgcattc aacgtccccg cgtttatccc
    21541 caaaagcaaa cgcaaactgc tgcttcctgt cgcgtccgta caaaccttcc aaagcaacta
    21601 cctcaacgcc gcacccgaca gcctgttttc atgggaagtc tatacgcctg ccgccaaaac
    21661 cagcctgtcc gacatctcga cggcaaccgg catgagcatt gccgacatca aacgcctcaa
    21721 caacctgaac ggcaaccttg tcaacgcagg acgcagcatc cttgtcgcca agaacggcaa
    21781 aacccttcag acggcatcgg aatccgtcgt ttccatcgac atcgacaata cacccgacac
    21841 ctaccgttcc aatatgccgg caggcacggt gaacgtcggc attgcccgaa tccgacccgc
    21901 cgccgcacag acagcggaca ttaccgtcgc acctttgccg cagaaaaccg tccgtacgga
    21961 acccgatccc cttgtccgta ttgccgaacc tgcccttgcg acagccgcag cgcaacctca
    22021 aaccgaaaaa cagaccgcca tgccgtctga aacccaaacc gcaacactcg cgcagatcat
    22081 cccccaaaac gacatgcagg cggcagacga actcatgcag cttgttgccc gaaacaacct
    22141 gcgccgacag gctgaagaaa ccatctccgc cgtcatcggc acgcctgaca cagttgccga
    22201 acacaacatt tcctcatctc cgcaacatac cgttgccgcc gacggcaaac gccgggcacg
    22261 tttggaaacg cgcgtagcca aagctgccga cggcgaagcc gaaatctccc cgctccatgc
    22321 cagcatccac cgcgttgtag aaggcgacac cctgttcaac attgccaaac gctacaacgt
    22381 cagcgtagcc gacctgattg tcgccaacaa catcaaaggc aacaccatcc aaaaaggaca
    22441 ggtactccgc ctggcgcagg cagcccctgc ccaaacccgt attgaaaaag tatcctacac
    22501 cgcgcgcaaa ggcgacacct tcaaaagtat cgccgcgcgc ttcaatatcc atatcgacga
    22561 catccgccgg ctcaatccca acctgaacac catcaatccg ggacagaggg tcaaactgat
    22621 tggaagctga ttcggatacg gcacatgaca ggactttctc agtcctgtct ttttcatccc
    22681 acatttccca taccatcatg aaactcatca aatacctgca atatcaaggc ataggaagcc
    22741 gcaagcagtg ccaatggctg attgccggcg gttatgtttt catcaacgga acctgtatgg
    22801 acgacaccga tgcagacatc gattcctcat ctgtcgaaac gttggatatt gacggggaag
    22861 cagtaaccgt cgttcccgaa ccctatttct acatcctgct caacaagccc gaagattacg
    22921 aaacttcgca caaaccgaaa cactaccgca gcgtattcag cctgttcccc gacaatatgc
    22981 ggaacatcga tatgcaggcg gtcggcaggc tggatgcgga tacgaccggc gtattgctga
    23041 ttaccaacga cggcaaactg aaccacaacc tgacttcgcc gagcagaaaa attcccaagc
    23101 tatacgaagt aacgctcaaa caccccacag gagaaacgct ctgcgaaacc ctgaaaaacg
    23161 gtgtcctgct ccacgacgaa aacgaaacgg tttgcgccgc cgatgccgtg ttggaaagcc
    23221 cgtccgcatt gctcctgatc attaccgaag gcaaatacca ccaagtcaaa cggatggtcg
    23281 ccgccgcagg caaccgcgtg cagcatcttc accgccggcg attcgcacat ttggaaacag
    23341 aaaacctgaa acccggcgaa tggaaattta tcgattgtcc gaaactctaa aataacatcc
    23401 aagaattcca tttatattca tccacatact cattaaatat atggtttaac ccaatttaac
    23461 gcaaaaaatc aatttacgat ataatccatt tgtctgagta acgcctgttc aagcaggctt
    23521 atgagtaaga cgttttcccc gtaatgtgtt ttgccatcta tacttctccc cttgtataga
    23581 tggtttttta tagtggatta aatttaaacc agtacagcct tgcctcgcct tgccgtacta
    23641 tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatatttcaa
    23701 attccctctc tttcatcatt atttaaatgc tatcattaat ataattaaca aaatttcatt
    23761 tccatacacc gatgtagaag aataacaaat taatctattt ataaactccg attcttcctc
    23821 atcgggttat actcatcaga aatactcact gaaatatatg ccttttacat ggaaaatcac
    23881 tagacagttg aaaaacaatt agtcagttcc tgttaaaaaa cgcgtgtaga atttccgctt
    23941 tatctcaatc ggacacggtt tcaatatgtc ttccccttca aataccaatc gtcaaacctg
    24001 atccagccga ttaacctata tcctgaccgt tgccggcgcg actgtcggct tcggcgcgac
    24061 gtggcgtttt ccctaccttg tcggcgaaaa cggcggcggc gcgtatgtgt ttttattctg
    24121 tatcgcgatg ctggttatcg gcatcccgat gattttggtg gaaaatgtca tcggacggcg
    24181 caaaggcgtg aacgcgctgg atgcgttcgg cggcccgatg aacggcaaac ccattgccaa
    24241 aatttggaaa ctggtcggct ggatgggctg ctcggcgcgt tcggcatcat ggcttattac
    24301 atggtgctcg gcggctgggt tatcagctac attgttaata tcatcggcgg taatttggac
    24361 atttccagtc ctgtttccag cgaagtcacc aaaagtttct ttaccgaaca catcgaaaac
    24421 agtccttggg aaattgcttt ctacaccttc ctatttgtgg ttgtgaacca atggatcttg
    24481 gtaaaaggcg tgatcggcgg tattgaaaaa gcggcaaaat acctgatgcc tttgctgttt
    24541 ttattcctga ttgccatggt tgtgcgcaac gttaccctgc cgggcgcaat ggaaggcatt
    24601 accttctatc tgaaacctga cttcagcaaa attacagccg aactgttcgt cttcgtttta
    24661 ggacaagtgt tctttacctt gagcttgggt ttcggcgtga tgattacctt gtccagctat
    24721 ctggataaga acgaaaatct ggtgcaaacc gcggtcatca cggccattac caataccatc
    24781 atcgccgtac tggccggctt tatgattttc ccgtcgctct tcagcttcgg cgtcgcgccc
    24841 aattctggcc cgactttggt attccaaagt ttgccgattg tgttctcaca tatgtgggca
    24901 ggacctgtgt tcgctgtcat tttcttctct ctgctcctga ttgccgcgct gacaacttcg
    24961 ctgacgattt atgaagtgtt gattacgacc attcaggaaa aaaccaaaat ccgccgtacc
    25021 gccgcaatca cgattgtatt gtccgccatc ttcatcttcg gcaatattcc gtccattctg
    25081 agctatggcc cgtggaaaga tgtttccata tttggcaaaa atatttttga cgcttttgac
    25141 tacatcagcg gcaacatctt gtttatgctg accgcgctcg gctccgcgct gtttgtcggt
    25201 tttgtgatga aggatgaagc gaaggacgaa ttgctttata aaggcaacca tataacggtc
    25261 aatatttggt ttgcctatgt gaaatacctt gtgccgctgg tgattttgct gattttcgtc
    25321 agcaacctgt tctaatccgc agcaatcgat gccgtctgaa agtcatacct ctttcagacg
    25381 gcattgcgtt gatgcccgcc acaatacccg caacgccaga atccgaaccg gcttgccggc
    25441 ttctgtcgga tatttccggg caggcggcgt tccgtctgct tagacaatcg tcctttaaaa
    25501 caggtagaat ctgccccaac gggaaacaca tccttcagac ggcaaaaccc ataccccaaa
    25561 ccatcaggaa tcccccttat gaacagacaa aaagtcatcg ccatcgacgg cccgggcgca
    25621 tcgggcaaag gcacggttgc cgcccgcgtt gccgccgcat tgggatacga ttatctcgat
    25681 accggcgcac tctaccgcct gaccgcccta tatgcacaaa aacaaggcgt ggaatggcac
    25741 gatgaagaaa acgtttccaa actggcaaaa aaactgcccg ccgtattttc aggcagccgc
    25801 atcctgctcg acggcgaaga cgtttcagac ggcatccgga cagaagccat cggcatgggc
    25861 gcatccgcag tcgcacagtt gcctaaagtc cgcgcctccc tgctgcaacg ccaacgcgat
    25921 tttctgaccg aaaaaggact ggtcgccgac ggacgggaca ccggatcggt cgtcttcccc
    25981 caggccgaac tcaaaatttt tctgacagcc gaatccaaaa tcagggccga acgccgcgcc
    26041 aaacaaatcg gcatcccctg cgaaggtttg gcattcgagc gcatcctgtc cgacatcgaa
    26101 gccagagacg aggcagaccg aaaccgcaag gttgcccccc tgaaacaaca acccgatgcc
    26161 ctgcttttgg atacgagccg cctgactata gaagaaactg taaaaaaagt gcttgattgg
    26221 tatcgtaaag tttaaatttt caggtataat cgcccgcatt gcgtttcaga cagcatgaat
    26281 ttccccatat gccgtctgaa accttattta cccgtctgcc ctgccaagga cggcagacac
    26341 ccaccaaccc accccgcacc ccttggcggt gtaccgaaaa gagttatata tgtctatgga
    26401 aaattttgct cagctgttgg aagaaagctt taccctgcaa gaaatgaacc cgggtgaggt
    26461 gattaccgct gaagtagtgg caatcgacca aaacttcgtt accgtaaacg caggtctgaa
    26521 atcagaatcc ctgattgatg tagctgaatt caaaaacgct caaggcgaaa ttgaagttaa
    26581 agtcggcgac ttcgttaccg ttaccatcga atccgtcgaa aacggcttcg gcgaaaccaa
    26641 actgtcccgc gaaaaagcca aacgcgctgc cgattggatt gccctggaag aagccatgga
    26701 aaacggcaac atcctgtccg gcatcatcaa cggcaaagtc aaaggcggcc tgaccgttat
    26761 gattagcagc atccgcgcat tcctgccggg ttctttggtc gacgtacgtc ctgtaaaaga
    26821 cacttctcac ttcgaaggca aagagatcga attcaaagtg atcaaactgg acaaaaaacg
    26881 caacaacgtc gttgtttccc gccgcgccgt tctggaagcc actttgggtg aagaacgcaa
    26941 agccctgctg gaaaacctgc aagaaggctc cgtcatcaaa ggcatcgtta aaaacattac
    27001 cgattacggt gcattcgttg acttgggcgg catcgacggt ctgttgcaca tcaccgattt
    27061 ggcatggcgg cgcgtgaaac acccgagtga agtcttggaa gtcggtcagg aagttgaagc
    27121 caaagtattg aaattcgacc aagaaaaaca acgcgtttcc ttgggtatga aacaactggg
    27181 cgaagatcct tggagcggtc tgacccgccg ttatcctcaa ggcacccgcc tgttcggcaa
    27241 agtatccaac ctgaccgact acggcgcatt cgtcgaaatc gaacaaggca tcgaaggttt
    27301 ggtacacgtc tccgaaatgg actggaccaa caaaaacgta cacccgagca aagtcgtaca
    27361 actgggcgac gaagtcgaag tcatgatttt ggaaatcgac gaaggccgcc gccgtatctc
    27421 tttgggtatg aaacaatgcc aagccaatcc ttgggaagaa tttgccgcca accacaacaa
    27481 aggcgacaaa atctccggcg cggttaaatc cattaccgat ttcggcgtat tcgtcggcct
    27541 gcccggcggc atcgacggtt tggttcacct gtccgacctg tcctggaccg aatccggcga
    27601 agaagccgta cgcaaataca aaaaaggcga agaagtcgaa gccgtcgtat tggcaatcga
    27661 cgtggaaaaa gaacgcatct ccttgggtat caaacaactg gaaggcgatc cgttcggcaa
    27721 cttcatcagc gtgaacgaca aaggttcttt ggttaaaggt tccgtgaaat ctgtcgatgc
    27781 gaaaggcgcc gttgtcgccc tgtctgacga agtagaaggc tacctgcctg cttccgaatt
    27841 tgcagccgac cgcgttgaag atttgaccac caaactgaaa gaaggcgacg aagttgaagc
    27901 cgtcatcgtt accgttgacc gcaaaaaccg cagcatcaaa ctttccgtta aagccaaaga
    27961 tgccaaagaa agccgcgaag cactgaactc cgtcaatgcc gccgccaatg cgaatgccgg
    28021 caccaccagc ttgggcgacc tgctgaaagc caaactctcc ggcgaacaag aataaggttg
    28081 cagacatgac aaagtctgag ttaatggttc gtttggcaga agtgtttgcc gccaaaaacg
    28141 gcacgcatct tctggcaaaa gacgtagagt acagcgtaaa agtcttggtt gacaccatga
    28201 ctagatcgct tgcccgaggt caacgcatcg aaatccgcgg tttcggcagc ttcgatttga
    28261 accatcgtcc tgcccgcatc ggtcgcaatc ccaaaaccgg cgagcgtgtg gaagtacctg
    28321 aaaaacatgt accccacttc aagcccggta aagaattgcg cgagcgggtc gacttggctt
    28381 taaaagaaaa tgccaattaa accttagcat caaaacgccg ctgttacgcg gcgttttttc
    28441 tgtggtttaa cttcatccgc tgcttcaata ccttgagcca agcaagcaac ggattagagc
    28501 gtggatt
//
LOCUS       DBBZYD010000014        28413 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.014, whole genome shotgun sequence.
ACCESSION   DBBZYD010000014 DBBZYD010000000
VERSION     DBBZYD010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28413
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.014"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            25..1107
                     /gene="mraY"
                     /locus_tag="ACJJDL_000510"
     CDS             25..1107
                     /gene="mraY"
                     /locus_tag="ACJJDL_000510"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HGG7573282.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIASLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYA
                     SGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            1222..1494
                     /locus_tag="ACJJDL_000511"
     CDS             1222..1494
                     /locus_tag="ACJJDL_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG7573283.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            1584..2921
                     /gene="murD"
                     /locus_tag="ACJJDL_000512"
     CDS             1584..2921
                     /gene="murD"
                     /locus_tag="ACJJDL_000512"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HGG7573284.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLSPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATKDIPLQGLHN
                     AANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGKKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            3047..4372
                     /locus_tag="ACJJDL_000513"
     CDS             3047..4372
                     /locus_tag="ACJJDL_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HGG7573285.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            4376..5443
                     /gene="murG"
                     /locus_tag="ACJJDL_000514"
     CDS             4376..5443
                     /gene="murG"
                     /locus_tag="ACJJDL_000514"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HGG7573286.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            5598..7007
                     /gene="murC"
                     /locus_tag="ACJJDL_000515"
     CDS             5598..7007
                     /gene="murC"
                     /locus_tag="ACJJDL_000515"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HGG7573287.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            7121..8035
                     /locus_tag="ACJJDL_000516"
     CDS             7121..8035
                     /locus_tag="ACJJDL_000516"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HGG7573288.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            8025..8753
                     /locus_tag="ACJJDL_000517"
     CDS             8025..8753
                     /locus_tag="ACJJDL_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HGG7573289.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            8839..10083
                     /gene="ftsA"
                     /locus_tag="ACJJDL_000518"
     CDS             8839..10083
                     /gene="ftsA"
                     /locus_tag="ACJJDL_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HGG7573290.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            10202..11380
                     /gene="ftsZ"
                     /locus_tag="ACJJDL_000519"
     CDS             10202..11380
                     /gene="ftsZ"
                     /locus_tag="ACJJDL_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HGG7573291.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            11519..12829
                     /locus_tag="ACJJDL_000520"
     CDS             11519..12829
                     /locus_tag="ACJJDL_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HGG7573292.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            13455..14330
                     /gene="prpB"
                     /locus_tag="ACJJDL_000521"
     CDS             13455..14330
                     /gene="prpB"
                     /locus_tag="ACJJDL_000521"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HGG7573293.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            14416..15570
                     /gene="prpC"
                     /locus_tag="ACJJDL_000522"
     CDS             14416..15570
                     /gene="prpC"
                     /locus_tag="ACJJDL_000522"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HGG7573294.1"
                     /translation="MTETTQTPTLKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            15731..16519
                     /locus_tag="ACJJDL_000523"
     CDS             15731..16519
                     /locus_tag="ACJJDL_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HGG7573295.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIAATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLTDERNPLYQMIISMF"
     gene            16597..19203
                     /gene="acnD"
                     /locus_tag="ACJJDL_000524"
     CDS             16597..19203
                     /gene="acnD"
                     /locus_tag="ACJJDL_000524"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HGG7573296.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRQAGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKTQKEIIDRDLYATAVLS
                     GNRNFDGRVHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPDTNRH
                     TLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            20006..21175
                     /gene="prpF"
                     /locus_tag="ACJJDL_000525"
     CDS             20006..21175
                     /gene="prpF"
                     /locus_tag="ACJJDL_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HGG7573297.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            21589..22788
                     /locus_tag="ACJJDL_000526"
     CDS             21589..22788
                     /locus_tag="ACJJDL_000526"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG7573298.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSIVLSCLGERLTTPEAVI
                     TFSKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVACGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMDKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELVGIL"
     gene            23146..23766
                     /locus_tag="ACJJDL_000527"
     CDS             23146..23766
                     /locus_tag="ACJJDL_000527"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HGG7573299.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRRGCGDTAVFGL"
     gene            complement(23893..24336)
                     /locus_tag="ACJJDL_000528"
     CDS             complement(23893..24336)
                     /locus_tag="ACJJDL_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HGG7573300.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLATPPDRINIGSVVRHLEPMQLVECMGSNNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            24510..24878
                     /locus_tag="ACJJDL_000529"
     CDS             24510..24878
                     /locus_tag="ACJJDL_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG7573301.1"
                     /translation="MKPLKRHPALIGLSRDHYHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEETKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            24923..26077
                     /locus_tag="ACJJDL_000530"
     CDS             24923..26077
                     /locus_tag="ACJJDL_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HGG7573302.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(26134..27006)
                     /locus_tag="ACJJDL_000531"
     CDS             complement(26134..27006)
                     /locus_tag="ACJJDL_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HGG7573303.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATVPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALIENLWRAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            27091..27903
                     /locus_tag="ACJJDL_000532"
     CDS             27091..27903
                     /locus_tag="ACJJDL_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HGG7573304.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGEVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         6461 a         7351 c         7970 g         6631 t
ORIGIN      
        1 gacaaaacaa aaaaaggaag ccccatgttt ttatggctcg cacatttcag caactggtta
       61 accggtctga atatttttca atacaccaca ttccgcgccg tcatggcggc gttgaccgcc
      121 ttagcgtttt ccctgatgtt cggcccgtgg acgatacgca ggctgaccgc gctcaaatgc
      181 gggcaggcag tgcgtaccga cggtccgcaa acccacctcg tcaaaaacgg cacgccgacg
      241 atgggcggtt cgctgattct gaccgccatt accgtgtcca ccctgttgtg gggcaactgg
      301 gcaaacccgt atatctggat tctcttgggc gtattgctcg ccacgggcgc actcggtttt
      361 tacgacgact ggcgcaaagt cgtctataaa gaccccaacg gcgtgtccgc caaattcaaa
      421 atggtgtggc agtcaagcgt tgccattatc gccagtttgg cattgtttta ccttgccgcc
      481 aattccgcca acaatatttt gattgtcccg ttcttcaaac aaatcgccct gccgctgggc
      541 gtggtcggct ttttggtgtt gtcttacctg accatcgtcg gcacatccaa tgccgtcaac
      601 ctcaccgacg gcttggacgg ccttgcgacc ttccccgtcg tcctcgttgc cgccggcctc
      661 gccatcttcg cctatgccag cggccactca caatttgccc aatacctgca attaccttac
      721 gttgccggcg caaacgaagt ggtgattttc tgtaccgcca tgtgcggcgc gtgcctcggt
      781 ttcttgtggt ttaacgccta tcccgcgcaa gtctttatgg gcgatgtcgg tgcattggca
      841 ttgggtgccg cgctcggtac cgtcgccgtc atcgtccgcc aagagtttgt cctcgtcatt
      901 atgggcggat tatttgtcgt agaagccgta tccgttatgc ttcaggttgg ctggtataag
      961 aaaaccaaaa aacgcatctt cctgatggcg cccatccatc accactacga acaaaaaggc
     1021 tggaaagaaa cccaagtcgt cgtccgcttt tggattatta ccatcgtctt ggtgttgatc
     1081 ggtttgagta ccctcaaaat ccgctgaacc tatgccgtct gaacaccttt cagacggcat
     1141 ttgaacgcgc aataaacctg cggcgacaat ccgcccagcc ctatcgttaa cggcggctta
     1201 tactaaaaca gaagtaaaac catgaaacag acagtcaaat ggcttgccgc cgccctgatt
     1261 gccttgggct tgaaccaagc ggtgtgggcg gatgacgtat cggattttcg ggaaaacttg
     1321 caggcggcag cacagggaaa tgcagcagcc caatacaatt tgggcgcaat gtattacaaa
     1381 ggacgcggcg tgcgccaaga ccttgtgctc gctcaagaat ggtttggtaa ggcttgtcaa
     1441 aacggagacc aagacggctg cgacatttac caacgcctga aggcaggtta ttgaacagcc
     1501 cgcgatgccg tctgaaagcg gcttgggcag gggcggacat ccccccacct gcccaatatg
     1561 atttgtttta ggacaaaacc aaaatgacgc ttgaaaacaa aaaaatcctc gtcgccggac
     1621 tcggcggtac gggtatttcc atgattgcct atctgcgcaa aaacggcgcg gaggtggccg
     1681 cttatgatgc ggagttgaag cccgagcgcg tgtcgcaaat cggtaagatg tttgacgggc
     1741 tggtgtttta cacaggccgt ctgaaagatg cgctggacaa cggtttcgat attttggcac
     1801 tcagccccgg catcagcgag cgtcagccgg atattgaggc gttcaagcaa aacggcggac
     1861 gcgtgttggg cgacatcgaa ttgctggcgg acattgtgaa ccgccggggc gacaaggtaa
     1921 ttgcgattac cggcagcaac ggcaaaacca cggtaacgag cctggtcggc tatctctgta
     1981 tcaagtgcgg gctggatacc gttatcgcgg gcaatatcgg cacgccggtt ttggaggcgg
     2041 aatggcagcg cgaaggcaaa aaggcggacg tgtgggtgtt ggagctttcc agcttccaac
     2101 tggaaaacac cgaaagcctg agcccgacgg cggcgacggt actgaatatt tccgaagacc
     2161 atctcgaccg ctacgacgac ttgctcgact acgcgcatac caaagccaag attttccgtg
     2221 gcgacggtgt gcaggttttg aatgcggacg atgcgttctg ccgtgccatg aaacgtgccg
     2281 ggcgcgaggt aaaatggttt tcgttggaac acgaagccga tttttggttg gaacgtgaga
     2341 caggccgcct gaaacaaggc aatgaagatt tgattgccac gaaagacatt ccgttgcaag
     2401 gcttgcacaa cgccgccaac gtcatggctg ccgtggcttt gtgcgaagcc gtcggtttgc
     2461 cgcgcgaagc attgcttgaa cacgtcaaaa ccttccaagg cctgccgcac cgcgtggaaa
     2521 aaatcggcaa gaaaaacggc gtggtattca ttgatgacag caaaggcacg aatgtcggcg
     2581 cgaccgccgc cgcgattgcc ggtttgcaaa atccgctctt cgtgatttta ggcggcatgg
     2641 gcaaagggca ggacttcacg cctctgcgcg acgcgcttgc cggcaaggca aaaggcgtgt
     2701 tcctgatcgg cgttgatgcg ccgcaaatcc gccgcgattt ggacggctgc ggtctgaata
     2761 tgaccgactg cgccactttg gaagaagccg ttcagacggc atatgcccaa gccgaagcgt
     2821 gcgatatcgt gctgctcagc ccggcttgtg cgagttttga tatgtttaaa ggctacgcgc
     2881 accgttcgga agtgtttatc gaagcgttta aggctttgtg atgccgtctg aaatgcaaac
     2941 gccgtcattg ttgggcggca agtaaagatt tagaataccg atttgggatg tatcgtatgt
     3001 tcggacggca ttgtctgccg tctgaaattt ttgccctttg cggcaggtgc aaacagactg
     3061 gcaggtggtt tttttgaaga tttcggaagt attggtaaaa gtgggcgacg gtgtccacac
     3121 tctgctgctc gacagaccga ttgtgcgcga cggcaggaaa ttcgacgcgc cgcttttgtg
     3181 gatggtggtg ctgatgacgg cgttcagcct gctgatgatt tattcggctt ctgtgtattt
     3241 ggcatcgaag gaaggcggcg atcagttttt ctatttgacc agacaggcgg ggttcgtcgt
     3301 tgccggcttg atagcgagcg gttttttatg gtttctttgc aggatgagga catggcggcg
     3361 gcttgtgccg tggatttttg ccctatccgg cctgttgctg gtagtcgtat tgattgccgg
     3421 gcgcgaaatc aatggcgcga cccgttggat acctttgggt ccgttgaatt tccagccgac
     3481 cgagctgttc aagctggcgg tcatccttta tttggcaagc ctgttcacgc gccgtgaaga
     3541 agtgttgcgc agcatggaaa gtttgggttg gcagtcgatt tggcggggga cggccaatct
     3601 gatcatgtcc gccaccaatc cgcaggcacg tcgtgaaaca ttagaaatgt acggccgttt
     3661 ccgggcgatc atcctgccga ttatgctggt ggcgttcggt ttggtgctga taatggtaca
     3721 gccggatttc ggttcgtttg tcgtcattac cgtcattgcc gttggaatgc tgtttttggc
     3781 aggattgccg tggaaatatt ttttcgtcct ggtaggcagc gtcttgggcg ggatggtgct
     3841 gatgattacc gccgctccct accgtgtgca gcgggtagtg gcatttttgg acccgtggaa
     3901 agaccctcag ggtgccggct accagcttac ccactctctg atggcaatcg ggcgcggaga
     3961 gtggttcggt atgggtttgg gtgcgagttt gagcaaacgc ggctttctgc cggaagcgca
     4021 taccgatttt atttttgcca tcatcgccga agaattcggt ttcttcggta tgtgtgtgct
     4081 gatattctgt tacggctggc tggtggtgcg ggcgttttcc atcggcaagc agtcgcgcga
     4141 tttgggtttg actttcaacg cctatatcgc ttcgggtatc ggcatttgga tcggtatcca
     4201 aagtttcttc aatatcggtg tgaacatcgg tgctttgccg accaaaggtc tgacgctgcc
     4261 gttgatgtcc tatggcggtt cgtcagtctt tttcatgctg atcagcatga tgctgctgtt
     4321 gcgtatagat tatgaaaacc gccggaaaat gcgcggttat cgggtggagt aaatcatggg
     4381 cggtaaaacc tttatgctga tggcgggcgg aacgggcgga catattttcc ccgcgctggc
     4441 ggtggcggat tcattgcgcg cgcgcggcca tcatgtgatt tggctgggca gcaaggattc
     4501 gatggaagag cgtatcgtgc cgcaatacgg catacgcttg gaaacgctgg cgattaaagg
     4561 cgtgcgcggc aacggcatca aacgcaagct gatgctgccg tttactttgt atcaaaccgt
     4621 ccgcgaagcg cagcggatta tccgcaaaca ccgtgtcgag tgcgtcatcg gcttcggcgg
     4681 cttcgttacc ttccccggcg gtttggcggc gaagctatta ggcgtgccga ttgtgattca
     4741 cgagcaaaac gccgtggcag gtttgtccaa ccgccacctg tcgcgctggg cgaagcgggt
     4801 gttgtacgct tttccgaaag cgttcagcca cgaaggcggc ttggtcggca accccgtccg
     4861 cgccgatatt agcaacctgc ccgtgcctgc cgaacgcttc caagggcgtg aaggccgtct
     4921 gaaaattttg gtggtcggcg gcagtttggg cgcggacgtt ttgaacaaaa ccgtaccgca
     4981 ggcattggct ttgctgcccg acaatgcgcg tccgcagatg taccaccaat cgggacgggg
     5041 caagctgggc agcttgcagg cggattacga cgcgctgggc gtgaaagccg aatgtgtgga
     5101 atttattacc gacatggtgt ccgcctaccg cgatgccgat ttggtgattt gccgtgccgg
     5161 cgcgctgacg attgccgagt tgacggcggc gggattgggt gcgttgttag tgccgtatcc
     5221 tcacgccgtt gatgaccatc aaaccgccaa cgcacgtttt atggtgcagg cggaggcggg
     5281 attgctgttg ccgcaaaccc agttgacggc ggaaaaactc gccgaaatcc tcggcagcct
     5341 gaaccgcgaa aaatgtctca aatgggcaga aaacgcccgt actttggcac tgccgcacag
     5401 tgcggacgac gttgccgaag ccgcgattgc gtgtgcggcg taaactgccg aaccatgccg
     5461 tctgaaaagc cgttcagacg gcatggatgt tttttatttc aatccgctat atatttgtca
     5521 gaaaactatg gcgcgcaaac ggtcagccct ttaaaataac gcctttacgc actaaaaacc
     5581 aaccggaacg caacattatg atgaaaaatc gagttaccaa catccatttt gtcggtatcg
     5641 gcggcgtcgg catgagcggc atcgccgaag tcttgcacaa tttgggtttt aaagtttccg
     5701 gttcggatca ggcgcgaaat gccgctaccg agcatttggg cagcctgggc attcaagttt
     5761 atcccggcca taccgcagaa cacgttaacg gtgcggatgt cgtcgttacc tctaccgccg
     5821 tcaaaaaaga aaatcccgaa gttgtcgctg cgttggagca gcaaattccc gttattccgc
     5881 gcgccctgat gttggcggag ttgatgcgct tccgtgacgg catcgccatt gccggcacgc
     5941 acggcaaaac cacgaccacc agcctgaccg cctccatcct cggcgcggca ggacttgacc
     6001 cgactttcgt tatcggcggc aaactcaacg ccgcaggcac caacgcccgc ttgggcaaag
     6061 gcgaatacat cgttgccgaa gccgacgagt cggatgcatc ctttctgcac ctgacaccga
     6121 ttatgtccgt cgttaccaat atcgacgaag accatatgga tacctacggg cacagtgttg
     6181 agaagctgca tcaggcgttt atcgatttca tccaccgtat gcccttctac ggcaaagcct
     6241 ttttgtgtat tgacagcgaa cacgtccgcg cgattttgcc caaagtgagc aaaccttatg
     6301 ctacttacgg tttggacgat accgccgaca tctacgccac cgacatcgaa aacgtcggcg
     6361 cgcaaatgaa attcaccgtc catgttcaaa tgaaaggaca tgagcagggg tcgtttgaag
     6421 tcgtgctgaa tatgcccggc agacacaacg tgctgaacgc attggcagcc atcggcgtgg
     6481 cgctggaagt cggcgcatcg gttgaagcga tccaaaaagg cttgctcggc tttgaaggcg
     6541 tcggccgccg cttccaaaaa tacggcgaca tcaagttgcc aaacggcggg accgcgctct
     6601 tggtggacga ctacggacac caccccgtcg aaatggcggc gacccttgcc gccgcacgcg
     6661 gcgcgtatcc ggaaaaacgt ttggtactcg ccttccagcc gcaccgctat acccgcacgc
     6721 gcgatttgtt tgaagacttt accaaagtcc tcaataccgt tgacgcgctg gtgctgaccg
     6781 aagtttatgc cgccggtgaa gagccgattg ccgccgccga ttcccgcgct cttgcccgcg
     6841 ccatccgcgt gttgggcaaa ctcgagccga tttactgcga aaacgttgcc gatctgcccg
     6901 aaatgctgtt gaacgttttg caggacggcg acatcgtgtt gaatatgggc gcgggaagca
     6961 tcaaccgcgt tcccgccgcg ctactggaat tgtcgaaaca gatttgaggc acaccctcct
     7021 gacagacgga acatcatata aaggtcgtct gaaaccgcaa atcaggtttc agacgacctc
     7081 tggcaacaag cataaagcaa tcaggaaaga acaaaaaaca atgcagaatt ttggcaaagt
     7141 ggccgtattg atgggcggtt tttccagcga acgagaaatc tcgctggaca gcggcaccgc
     7201 cattttgaac gctttaaaaa gcaaaggcat agacgcatac gccttcgatc ccaaggaaac
     7261 cccattgtct gaattgaagg cacaaggttt tcagacggca ttcaacatcc ttcacggtac
     7321 ttacggcgaa gacggggcgg ttcaaggcgc gttggaactg ttgggcattc cctataccgg
     7381 cagcggtgtc gccgcctccg ccatcggcat ggacaaatac cgctgcaaac tgatttggca
     7441 ggcattgggg ctgcccgttc ccgagttcgc cgtcctgcac gacgacactg atttcgatgc
     7501 cgtcgaagaa aaattgggcc tgccgatgtt tgtgaaaccg gcggccgaag gcagcagcgt
     7561 cggtgtggta aaagtcaaag aaaaaggccg tctgaaaagc gtttacgaag aattgaaaca
     7621 ccttcagggc gaaatcattg ccgaacggtt tatcggcggc ggcgaatatt cctgccccgt
     7681 cctgaacggc aaaggcctgc ccggcataca catcatcccc gcgaccgagt tttacgacta
     7741 cgaagccaag tacaaccgcg acgacaccat ttatcaatgt ccttcggaag atctgaccga
     7801 agccgaagaa agcctgatgc gcgaactggc ggttcgcggc gcgcaggcaa tcggtgcgga
     7861 aggctgcgtg cgcgtcgatt tcctcaaaga taccgacggc aaactctatc tgttggaaat
     7921 caacaccctg cccggtatga cgagccatag tttagtaccg aaatccgctg ccgttacggg
     7981 cgtgggtttt gccgatttat gtattgaaat tttgaagacc gcacatgtgg gataatgccg
     8041 aagcgatgga acggctgacg cgctggctgc ttgtcatgat ggcgatgctg cttgctgcgt
     8101 ccgggctggt ttggttttac aattcgaatc atctgcccgt caagcaggtg tcgctgaagg
     8161 gcaacctggt ttattccgat aagaaagcat tgggcagttt ggcgaaagaa tacatccatg
     8221 ggaatatttt gaggacggac atcaatggcg cacaggaggc ctaccgccgg tatccgtgga
     8281 ttgcgtcggt catggtgcgc cgccgttttc ccgacacggt tgaggtcgtc ctgaccgagc
     8341 gcaagccggt cgcgcgttgg ggcgaccatg ccttggtgga cggcgaaggc aatgtttttg
     8401 aagcccgctt ggacagaccc ggaatgccgg tattcagagg cgcggaagga acgtctgccg
     8461 aaatgctccg ccgttatgac gaattttcga ctgttttggc aaaacagggt ttgggcatca
     8521 aagagatgac ctatacggca cgttcggcgt ggattgtcgt tttggacaac ggcatcaccg
     8581 tcaggctcgg aagggaaaac gagatgaaac gcctccggct ttttaccgaa gcgtggcagc
     8641 atctgttgcg taaaaataaa aatcggttat cctatgtgga tatgaggtat aaggacggat
     8701 tttcagtccg ctatgcttcc gacggtttac ccgaaaaaga atccgaagaa tagtgggaac
     8761 aggtatcgga cagattacgg ccgtgccgtc tgaaacggtg cgacgcaaat ttcaatcagt
     8821 tttaagagca gacgaacaat ggaacagcag caaagataca tcagcgtact ggatatcggt
     8881 acgtctaaag tcctcgcact gatcggggaa gttcaagatg acgacaaaat caacatcgtc
     8941 ggtttggggc aggctccttc acggggcttg cgcgcgggca tggtaaccaa tatcgatgcc
     9001 accgtccaag ccatcaggca ggcggtcaat gatgccgagc tgatggcgga taccaaaatt
     9061 actcacgtta ccacaggtat cgcaggcaac cacatccgca gtctcaattc gcaaggtgtg
     9121 gttaaaatta aagatgggga agtcacgcag gcagacatcg atcgcgccat tgaaacggca
     9181 aaggcaatca atatcccgcc cgatcaaaaa attctcgatg ccgtggttca agactacatt
     9241 attgacaccc aacttggcgt gagggagccc atcggtatga gcggtgtgcg tctggatacg
     9301 cgggtgcaca tcattaccgg tgcaagtacg gcagtgcaga atgtccaaaa atgtatcgag
     9361 cggtgcggtt tgaaaagcga tcagatcatg cttcagccgt tggcaagcgg gcaggcggtg
     9421 ctgactgaag atgaaaaaga cctcggcgta tgcgtcatcg acattggtgg cggaacgacc
     9481 gatattgccg tttatatgaa cggtgccatc cgccatacgt ccgtcattcc ggccggtggt
     9541 aatctgatta ccaaagattt gtccaaatcg ttgagaacac ctctcgatgc cgccgagtac
     9601 attaaaatcc attatggcgt ggcatcatgc gatacggaag gcttgggtga gatgattgaa
     9661 gttccgggcg tgggtgaccg gacatcgcgt caggtttcca gtaaggtttt ggcagcaatc
     9721 atcagcgcac gtattcagga gatttttggc gtagtgctgg gcgagctgca aaaatcgggt
     9781 ttccccaaag aagtgctgaa tgcgggtatc gttctgaccg gcggtgtgtc catgatgacc
     9841 gggattgtgg aatttgccga aaaaatcttc gatttgcctg tacgcaccgg tgcgccccaa
     9901 gaaatgggcg gtttgtccga ccgcgtccgc acaccgcgct tttctaccgc catcgggctg
     9961 cttcatgcag catgcaagct ggaaggaaac ttgccgcagc cggaaaacgg tgcagtgcaa
    10021 gagagggaag ggggcggcgg tttgttggca agattgaaac ggtggattga aaacagcttc
    10081 tgaacaggtg gattgccgtt tgacaggtga gaagtatttt gccagcagca agatacttct
    10141 tatataatga ataataattt atttaaaccg tcctctgaat ggggcgagca ggagtttttg
    10201 aatggaattt gtttacgacg tggcagaatc ggcagtcagc cctgcggtga ttaaagtaat
    10261 cggcttgggc ggcggcggtt gcaatgcaat caataacatg gttgccaaca atgtgcgcgg
    10321 tgtggagttt atcagtgcca atacggatgc gcagtctctg gcaaaaaacc atgcggcgaa
    10381 gagaatccag ttgggtacga atctgacacg cggtttgggc gcgggcgcga atcccgatat
    10441 cggccgtgcg gcagcccagg aagaccggga agccattgaa gaagccattc gcggtgcgaa
    10501 tatgctgttt atcacgaccg gtatgggcgg cggtaccggt accggttccg cgccggttgt
    10561 tgctgagatt gccaagtctt tgggcattct gaccgttgcc gtggttaccc gaccgttcgc
    10621 atatgaaggt aagcgcgtcc atgtcgcaca ggcagggttg gaacagttga aagaacacgt
    10681 cgattcgctg atcatcatcc cgaacgacaa actgatgact gcattgggtg aagacgtaac
    10741 gatgcgcgaa gccttccgtg ccgccgacaa tgtattgcgc gatgcggtcg caggcatttc
    10801 cgaagtggta acttgcccga gcgaaatcat caacctcgac tttgccgacg tgaaaaccgt
    10861 gatgagcaac cgcggtatcg ctatgatggg ttcgggttat gcccaaggta tcgaccgtgc
    10921 gcgtatggcg accgaccagg ccatttccag tccgctgctg gacgatgtaa ccttggacgg
    10981 agcgcgcggt gtgctggtca atattacgac tgctccgggt tgcttgaaaa tgtccgagtt
    11041 gtccgaagtc atgaaaatcg tcaaccaaag cgcgcatccc gatttggaat gcaaattcgg
    11101 tgcggctgaa gacgagacca tgagcgaaga tgccatccgg attaccatta tcgctaccgg
    11161 tctgaaagaa aaaggcgcgg tcgattttgt tccggcaagg gaggtagaag cggttgctcc
    11221 gtccaaacag gagcaaagcc acaatgtcga aggtatgatc cgcaccaatc gcggtatccg
    11281 cacgatgaac cttaccgctg cggatttcga caatcagtcc gtacttgacg actttgaaat
    11341 ccctgcgatt ttgcgtcgtc aacacaattc agacaaataa tgtgctgttt gcccgtaaac
    11401 ctgctgcctc ccgaatcggt ttgtccggtt tgggaggtat gtttttcaag atgttgcaat
    11461 ttcgtacggt ttgcggtcgg cggattcaga tttttccact tgatacagac tttcagatat
    11521 ggacacttca aaacaaacac tgttggacgg gatttttaag ctgaaggcaa acggtacgac
    11581 ggtgcgtacc gagttgatgg cgggtttgac aacttttttg acgatgtgct acatcgttat
    11641 cgtcaaccct ctgattttgg gcgagaccgg catggatatg ggggcggtat tcgtcgctac
    11701 ctgtatcgcg tctgccatcg gctgttttgt tatgggtttt gtcggcaact atccgattgc
    11761 actcgcaccg gggatggggc tgaatgccta tttcaccttt gccgtcgtta agggtatggg
    11821 cgtgccttgg caggttgcgt tgggtgcggt gttcatctcc ggtctgattt ttatcctgtt
    11881 cagctttttt aaagtcaggg aaatgctggt caacgcactg cctatgggtt tgaaaatgtc
    11941 gattgctgcc ggtatcggtt tgtttttggc actgatttcc ctgaaaggcg caggcattat
    12001 cgttgccaat ccggcaacct tggtcggttt gggcgatatt catcagccgt ccgcgttgtt
    12061 ggcattgttc ggttttgcta tggtggtcgt attgggacat ttccgcgttc aaggcgcaat
    12121 catcatcacc atcttgacca ttaccgtcat tgccagcctg atgggtttga atgaatttca
    12181 cggcatcatc ggcgaagtac cgagcattgc gccgactttt atgcagatgg attttgaagg
    12241 cctgtttacc gtcagcatgg tcagtgtgat tttcgtcttc ttcttggtcg atctatttga
    12301 cagtaccgga acgctggtcg gcatatccca ccgtgccggg ctgctggtgg acggtaagct
    12361 gccccgcctg aaacgcgcac tgcttgcaga ctctaccgcc attgtggcag gtgcggcttt
    12421 gggtacttct tccaccacgc cttatgtgga aagcgcggcg ggcgtatcgg caggcggacg
    12481 gaccggcctg acggcggtta ccgtcggcgt attgatgctc gcctgcctga tgttttcacc
    12541 tttggcgaaa agtgttcccg cttttgccac cgcgcccgcc ctgctttatg tcggcacgca
    12601 gatgctccgc agtgcgaggg atattgattg ggacgatatg acggaagccg cacccgcatt
    12661 cctgaccatt gtcttcatgc cgtttaccta ttcgattgca gacggcatcg ccttcggctt
    12721 catcagctat gccgtggtta aacttttatg ccgccgcacc aaagacgttc cgcctatggt
    12781 atggattgtt gccgtattgt gggcactgaa attctggtat ttgggctgat tgattcgata
    12841 ttaaaaatgc cgtctgaaag gttttcagac ggcattttgt ttgccgatat atttaatttt
    12901 tattaaatta tataaaaatc aaatatataa taaaatacat cggattgctt aaaaataata
    12961 cattgttttt atgtataaaa tattttataa gttttcagga ttttgattat cgaaaatttt
    13021 tcttgatttc ctgacaattt tattgaaaca aataattcaa aattaatcta gtttaatcat
    13081 ggaattaaaa taaaatatta aaattatgta atgagtctcc ttaaaaatgt ttgacatttt
    13141 cagtcttgtg ttttagatta tcgaaaaata aaactacata acactacaaa ggaacattac
    13201 tatgaaacca attcagatgt tttccccttt tctgaataat ccccttgttt tcttcttgtc
    13261 tgcggttttg ccgcataatt ccgaacggtc tgctgttttt ctttgattcg ttttaaatat
    13321 caataagata atttttccca tatattttta atgattggat tgggatgccc gacgcgtcgg
    13381 atggctgtgt tttgccgtcc gaatgtgatg gaagcctgtc catactgaaa aaaagtctat
    13441 aaaggagaaa tatgatgagt caacactctg ccggagcacg tttccgccaa gccgtgaaag
    13501 aatcgaatcc gcttgccgtc gccggttgcg tcaatgctta ttttgcacga ttggccaccc
    13561 aaagcggttt caaagccatc tatctgtccg gcggcggcgt ggcagcctgt tcttgcggta
    13621 tccctgattt gggcattacc acaatggaag atgtgctgat cgacgcacga cgcattacgg
    13681 acaacgtgga tacgcctctg ctggtggaca tcgatgtggg ttggggcggt gcattcaata
    13741 ttgcccgtac cattcgcaac tttgaacgcg ccggtgttgc agcggttcac atcgaagatc
    13801 aggtagcgca aaaacgctgc ggccaccgtc cgaacaaagc cattgtatct aaagatgaaa
    13861 tggtcgaccg tatcaaagct gccgtagatg cgcgcgttga tgagaacttc gtgattatgg
    13921 cgcgtaccga tgcgctggcg gtagaaggtt tggatgccgc tatcgaacgc gcccaagctt
    13981 gtgtcgaagc cggtgcggac atgattttcc ctgaagccat gaccgatttg aacatgtacc
    14041 gccaatttgc agatgcggtg aaagtgcccg tgttggcgaa cattaccgag tttggttcca
    14101 ctccgcttta tacccaaagc gagctggctg aaaacggcgt gtcgctggtg ctgtatccgc
    14161 tgtcatcgtt ccgtgcagca agcaaagccg ctctgaatgt ttacgaagcg attatgcgcg
    14221 atggcactca ggcggcggtg gtggacagta tgcaaacccg tgccgagctg tacgagcatc
    14281 tgaactatca tgccttcgag caaaaactgg ataaattgtt tcaaaaatga tttaccgctt
    14341 tcagactgcc tttcaacaaa tccgcatcgg tcgtctgaaa acccgaaacc cataaaaaca
    14401 caaaggagaa ataccatgac tgaaactact caaaccccga ccctcaaacc taaaaaatcc
    14461 gttgcgcttt ctggcgttgc ggccggtaat accgctttgt gtaccgttgg ccgtaccggc
    14521 aacgatttga gctatcgcgg ttacgacatt ctggatttgg cacaaaaatg cgagtttgaa
    14581 gaagtcgccc acctgctgat tcacggccat ctgcccaaca aattcgagct ggccgcttat
    14641 aaaaccaagc tcaaatccat gcgcggcctg cctatccgtg tgattaaagt tttggaaagc
    14701 ctgcctgcac atacccatcc gatggacgta atgcgtaccg gcgtatccat gctgggctgc
    14761 gttcatcctg aacgtgaaag ccatccggaa agtgaagcgc gcgacatcgc cgacaaactg
    14821 atcgccagcc tcggcagcat cctcttgtac tggtatcaat attcgcacaa cggcaaacgc
    14881 attgaggttg aaagcgacga agagaccatc ggcggtcatt tcctgcaact gttgcacggc
    14941 aaacgcccaa gcgaatcaca catcaaagcc atgcacgttt cactgattct gtatgccgaa
    15001 cacgagttca acgcttctac ctttaccgcc cgcgtgatcg ccggtacagg ctctgatatg
    15061 tactccagca ttaccggagc aatcggcgcg ttgaaaggtc cgaaacacgg cggcgcgaac
    15121 gaagtggctt acgatattca aaaacgctac cgcaatgccg acgaagctga agccgacatc
    15181 cgcgaacgca tcggccgcaa agaaatcgtg atcggtttcg gtcatccggt gtacaccatt
    15241 tccgaccctc gcaacgttgt cattaaagaa gtggcacgcg gtttgagcaa agaaaccggc
    15301 gatatgcgcc tctttgacat tgccgaacgt ttggaaagcg tgatgtggga agagaaaaaa
    15361 atgttcccga atctggactg gttctctgcc gtttcctacc aaaaattggg cgtaccgacc
    15421 gctatgttca caccgctgtt cgtaatttcc cgtacaaccg gttggagcgc acacgttctt
    15481 gagcaacgca aagacggcaa aatcatccgt ccgagcgcaa actacacagg ccctgaagat
    15541 ttggcgtttg tggagattga agaacgataa ttgaagaatg caatagcagt ttgttcttta
    15601 atttcggtat gcaaagctga ggatttcaga cgaccttgcc tgattggaaa ggttgtctga
    15661 aataagttta aaaatttaac ctaatagaag aagataatcc tgtattggtg caagtaacag
    15721 gataagaaac atggaagatt tatacataat actcgctttg ggtttggttg cgatgattgc
    15781 cggatttatc gatgcgattg cgggtggggg tggtttgatt acgctgcctg cactcttgtt
    15841 ggcaggtatt cctcccgtgt cggcaattgc caccaacaag ctgcaagcag ccgctgctac
    15901 gttttcggct acggtttctt ttgcacgcaa aggtttgatt gattggaaga aaggtctccc
    15961 gattgcggca gcatcgtttg caggcggcgt ggtcggtgca ttatcggtca gcttggtttc
    16021 caaagatatt ctgctggcgg tcgtgccggt tttgttgata tttgtcgcgc tgtattttgt
    16081 gttttcgccc aagctcgacg gcagtaagga aggcaaagcc agaatgtctt tttttctgtt
    16141 cggtctgacg gttgcaccac ttttgggttt ttacgacggt gtgttcggac cgggtgtcgg
    16201 ctcgtttttt ctgattgcct ttattgtttt gctcggctgc aagctgttga acgcgatgtc
    16261 ttacaccaaa ttggcgaacg ttgcctgcaa tcttggttcg ctatcggtat tcctgctgca
    16321 cggttcgatt attttcccga ttgcggcaac gatggcggtc ggtgcgtttg tcggtgcgaa
    16381 tttaggtgcg agatttgccg tccgcttcgg ttcgaagctg attaagccgc tgctgattgt
    16441 catcagcatt tcgatggctg tgaaattgtt gacagacgag agaaatccgc tgtatcagat
    16501 gattatttcg atgttttaaa ccctttcaga cgaccccttc aaaacgtcgg ctgaaacctc
    16561 aaaccacaag aaaaacagat ccccaggaga accgacatgg ctgccaacca acgttaccgc
    16621 aaaccgctgc ccggtacgga tttggaatac tacgacgcgc gtgcggcgtg tgaggacatc
    16681 aagcccggct cttacgacaa gctgccttac acgagccgca ttttggcgga gaatttggtc
    16741 aaccgcgcgg acaaagtcga tttgccgacg ctgcaaagct ggctgggtca gctgattgag
    16801 ggaaaacagg aaatcgactt tccttggtat ccggcgcggg tggtgtgcca cgatattctg
    16861 gggcagaccg cgttggtgga tttggcaggt ctgcgcgatg cgattgccga aaaaggcggc
    16921 gatcctgcca aagtgaatcc ggtggtgcaa acccagctca ttgtcgacca ctctttggcc
    16981 gttgaatgcg gcggttacga tcctgatgcc ttccgcaaaa accgcgaaat cgaagacaga
    17041 cgtaacgaag accgtttcca ctttatcaac tggacaaaaa ccgcatttga aaatgtggac
    17101 gtgattccgg cgggcaacgg catcatgcac caaatcaatc tggaaaaaat gtcgccggtt
    17161 gttcaagtta aaaacggcgt ggcgttcccc gatacctgcg tcggcacgga ttcgcacacg
    17221 ccgcacgtcg atgcgctggg cgtgatttcc gtgggtgtgg gcggattgga agcggaaacc
    17281 gtaatgctgg gacgcgcgtc catgatgcgc ctgcccgata ttgtcggtgt ggagctgacc
    17341 ggcaaacggc aggcgggcat tacggcgacg gatattgtgt tggcgctgac cgagtttctg
    17401 cgcaaagagc gcgtggtcgg ggcgtttgtc gaattcttcg gcgagggcgc gagaagcctg
    17461 tctatcggcg accgcgcgac catttccaac atgacgccgg agttcggcgc gactgccgcg
    17521 atgttcgcta ttgatgagca aaccattgat tatttgaaac tgaccggacg cgacgacgcg
    17581 caggtgaaat tggtggaaac ctacgccaaa accgcaggct tatgggcaga tgccttgaaa
    17641 accgccgttt atcctcgcgt tttgaaattt gatttgagca gcgtaacgcg caatatggca
    17701 ggtccaagta acccgcatgc ccgttttgcg accgccgatt tggcggcgaa agggctggcg
    17761 aagccttacg aagagccttc ggacggacaa atgcccgacg gcgcggtcat catcgccgcg
    17821 attaccagtt gcaccaacac ttccaacccg cgcaacgtcg ttgccgccgc gctgttggca
    17881 cgcaatgcca accgcctcgg cttgaaacgc aaaccttggg tgaaatcttc atttgccccg
    17941 ggttcaaaag tagccgaaat ctatttgaaa gaagcaggcc tgctgcccga aatggaaaaa
    18001 ctcggcttcg gtatcgtcgc cttcgcctgc accacctgta acggcatgag tggcgcgctg
    18061 gatccgaaaa cccagaaaga aatcatcgac cgcgatttgt acgccaccgc cgtactgtca
    18121 ggcaaccgca acttcgacgg ccgtgtccat ccgtatgcga aacaggcttt cctcgcttcg
    18181 cctccgttgg tcgttgccta cgcgctggca ggcagtatcc gtttcgatat tgaaaacgac
    18241 gtactcggcg ttgcagacgg caaggaaatc cgcctgaaag acatttggcc tgccgatgaa
    18301 gaaatcgatg ccgtcgttgc cgaatatgtg aaaccgcagc agttccgcga tgtgtatgta
    18361 ccgatgttcg acaccggcac agcgcaaaaa gcacctagtc cgctgtacga ctggcgtccg
    18421 atgtccacct atatccgccg cccaccttac tgggaaggcg cactggcagg ggaacgcaca
    18481 ttaagaggta tgcgtccgct ggcgattttg cccgacaaca tcaccaccga ccacctctcg
    18541 ccgtccaatg cgattttggc cgtcagtgcc gcaggcgagt atttggcgaa aatgggtttg
    18601 cctgaagaag acttcaactc ttacgcaacc caccgcggcg accacttgac cgcccaacgc
    18661 gctaccttcg ccaatccgaa actgtttaac gaaatggtga aaaacgaaga cggcagcgtg
    18721 cgccaaggct cgttcgcccg cgtcgaaccc gaaggcgaaa ccatgcgcat gtgggaagcc
    18781 atcgaaacct atatgaaccg caaacagccg ctcatcatca ttgccggtgc ggactatggt
    18841 caaggctcaa gccgcgactg ggctgcaaaa ggcgtacgcc tcgccggcgt agaagcgatt
    18901 gttgccgaag gcttcgagcg tatccaccgc accaacctta tcggcatggg cgtgttgccg
    18961 ctgcagttca aacccgacac caaccgccat accctgcaac tggacggtac ggaaacctac
    19021 gacgtggtcg gcgaacgcac accgcgctgc gacctgaccc tcgtgattca ccgtaaaaac
    19081 ggagaaaccg tcgaagttcc cgttacctgc cgcctcgata ctgcagaaga agtattggta
    19141 tatgaagccg gcggcgtgtt gcaacggttt gcacaggatt ttttggaagg gaacgcggct
    19201 tagaggtcgt ctgaaaagca agacgtagcg tgggtcgggt tcaacatttt gctcattcac
    19261 gtaattctcg atatggcagg catctactgt aaatcgtcat tcccgcgcag gcgggaatcc
    19321 agaaagtgga attgaggaaa ccttatttat ccgatgagtt tctgtgcgga caaatttgga
    19381 ttcccgcctg cgcgggaatg acggggttta ataatctgcc gtatcacaac acagtagccg
    19441 tagattgtgg cgaaccccga cagtttgcgg aatcaaacgg ctttgtcgga gtggcagcct
    19501 aatgtacttc tggaaagtgg gtgtagcgtg ggctttgccc gcgaaataaa ggctgaattg
    19561 acatggtata gaggattaac aaaaatcggg acaaggcggc gaagccgcag acagtacaga
    19621 tagtacggaa ccgattcact tggtgcttca gcaccttaga gaatcgttct ctttgagcta
    19681 aggcgagcca acgctgtact ggtttttgtt aatccactat aaatttaatc cactatactg
    19741 taaatcgtca ttcccgcgca ggcgggaatc cagaaagtgg aattgaggaa acctttttat
    19801 ccgatgagtt tctgtgcgga taaatctgga ttcccgcctg cgcgggaatg acggggttta
    19861 ataatctgcc gtatcacaac acagtagccg tagattgggg cgaaccccga cagtttgcgg
    19921 aatcaaacgg ctttggtcgg agtggcagcc taatccacta taaaaatcgt gggcagagcc
    19981 cacgctacat aaggagaatc tagaaatgcc gcaaattaaa attcccgccg tttactaccg
    20041 tggcggtaca tcaaaaggcg tgtttttcaa acgttccgac ctgcccgagg cggcgcggga
    20101 agcgggaagc gcacgcgaca aaatcctctt gcgcgtactc ggcagcccgg atccctacgg
    20161 caagcagata gacggtttgg gcaacgccag ctcgtccacc agcaaggcgg tgattttgga
    20221 caagtccgaa cgcgccgatc acgatgtcga ttaccttttc gggcaagttt ccatcgacaa
    20281 accttttgtc gattggagtg gcaactgcgg caacctcacc gccgccgtgg gcgcatttgc
    20341 catcgagcaa ggcttggtcg ataaaggcaa gattccttca gacggcatct gcacagtcaa
    20401 aatctggcag aaaaacatcg gcaaaaccat tattgcccat gtaccgatgc aaaacggcgc
    20461 agttttggaa acaggcgatt ttgagctcga cggcgtaacg ttcccggcag ccgaagtaca
    20521 aatcgaattt cttgatccag ccgacggcga aggcagtatg ttcccaaccg gcaatttggt
    20581 cgatgaaatt gatgtgccga atataggccg tttgaaagcc acgctcatca acgcgggcat
    20641 tccgaccgtt ttcctgaatg ccgccgactt gggctacacg ggcaaagagt tgcaagacga
    20701 catcaacaac gatgccgcag ctttggaaaa attcgagaaa atccgcgctt acggtgcgct
    20761 gaaaatgggt ctaatcagcg acgtatccga agctgccgcc cgcgcgcaca cgccgaaagt
    20821 cgccttcgtc gcgcccgccg ccgattacac cgcctccagt ggcaaaaccg tgaatgccgc
    20881 cgacatcgat ttgctggtac gcgccctgag catgggcaaa ttgcaccacg cgatgatggg
    20941 taccgcctct gttgccattg cgaccgccgc cgccgtgccc ggtacgctgg tcaaccttgc
    21001 cgcaggcggc ggaacgcgta aagaagtgcg cttcgggcat ccttccggca cattgcgcgt
    21061 cggtgcagcc gccgaatgtc aggacggaca atggacggcc accaaagcgg ttatgagccg
    21121 cagcgcacgc gtgatgatgg aaggttgggt cagggtgccg gaagattgtt tttaaattga
    21181 cgtagcatgg gtttgcccgc gagccataaa caggtcgtct gaaaaacaag taaacatcaa
    21241 atcactgacc attcctttcc cttgccctgt ggcggaaggc ggcaaatcac aaggaagaac
    21301 acggaaaccc cgataaaaga cagcttcccg tattaccgtc attcccgcgc aggcgggaat
    21361 ctagacctgt caatatggag gattggtagg ggaaaacagg tttcgtgagt tctacattct
    21421 ggattcccgc cacagcctgt cctcgcgtag gcggggacgg aataacgata gaaaatgcgg
    21481 catacgcttt gcccaaagag gccgtctgaa acaccttgcg cctgatgtct gcctttttca
    21541 gacgacccca caccaaaaaa acaaccacaa actacaagga gaaacatcat gtccgaccaa
    21601 ctcatcctcg ttctgaactg cggcagttca tcgctcaaag gcgccgttat cgaccgcaaa
    21661 agcggcagca tcgtcctaag ctgcctcggc gaacgcctga ccacgcccga agccgtcatt
    21721 acgttcagca aagacggcaa caaacgccaa gttcccctga gcggccgaaa ttgccacgcc
    21781 ggcgcggtgg gtatgctttt gaacgaactg gaaaaacacg gtctgcacga ccgcatcaaa
    21841 gccatcggcc accgcatcgc ccacggcggc gaaaaataca gcgagtctgt tttgatcgac
    21901 caggccgtaa tggacgaact caatgcctgc attccgcttg cgccgctgca caaccccgcc
    21961 aacatcagcg gcatcctcgc cgcgcaggaa catttccccg gtctgcccaa tgtcggcgtg
    22021 atggatactt cgttccacca aaccatgccg gagcgtgcct acacttatgc cgtgccgcgc
    22081 gagttgcgta aaaaatacgc tttccgccgc tacggtttcc acggcaccag tatgcgttac
    22141 gttgcccctg aagccgcacg catcttgggc aaacctctgg aagacatccg catgattatt
    22201 gcccacttag gcaacggcgc atccattacc gccatcaaaa acggcaaatc cgtcgatacc
    22261 agtatgggtt tcacgccgat cgaaggtttg gtaatgggta cacgttgcgg cgacatcgat
    22321 ccgggcgtat acagctatct gacttcccac gccgggatgg atgttgccca agtggatgaa
    22381 atgctgaaca aaaaatcagg tttgctcggt atttccgaac tttccaacga ctgccgcacc
    22441 ctcgaaatcg ccgccgacga aggccacgaa ggcgcgcgcc tcgccctcga agtcatgacc
    22501 taccgcctcg ccaaatacat cgcttcgatg gctgtggcct gcggcggcgt tgacgcactc
    22561 gtgttcaccg gcggtattgg cgaaaactca cgtaatatcc gagctaaaac cgtttcctat
    22621 cttgatttct tgggtctgca catcgacact aaagccaata tggacaaacg ctacggcaat
    22681 tcgggtatta tcagcccgac cgattcttct ccggctgttt tggttgtccc gaccaatgaa
    22741 gaactgatga ttgcctgcga cactgccgaa cttgtcggca tcttgtagcc aaaaaaggga
    22801 cgagtccgca caatgccgtc tgaaacccca aacgcccgat taggctgatg aggattttag
    22861 acggcattgt tcattttttt gttatcttgc atttttgtgc ggacggtgga atttcatcct
    22921 gtaaacataa atatttgtcg gaaaacagaa accctccgcc gccatttcta cgaaagcagg
    22981 aaaccagcaa cgcaaagcga cagggatttg ttggaaatga ccgaaaccga acgaaccgga
    23041 ttcccgcctg cgcgggaatg acgggatttt ctgtttttgt ggaaatgacg ggattttgaa
    23101 tttcgggcgt acaatacgga aaacatgacg ataaggacac aaaccatggc acagtttttc
    23161 gccgttcatc ccgacaatcc ccaagaacgc ctcatcaagc aggcggttga aatcgtcaat
    23221 caaggcggcg tggtggttta tccgaccgat tcgtgttacg ccttgggttg caaactcggc
    23281 gataaggcgg cgatggaacg catactctcc atccgcaaaa tcgatttgaa acaccacctg
    23341 accctgatgt gcgcagattt gagcgagttg ggcacatacg ccaaagtcga caacgtacag
    23401 tttcgtcagc ttaaagccgc cacacccggg ccttatactt ttattttaca ggcgacgaag
    23461 gatgtgccgg cgcgcacgct gcacccgaaa cgcaaaacca tcgggctgcg tattcccgat
    23521 aatgccattg cacaagccct gctgggggaa ttgggcgagc cgcttttaag ctgcaccctg
    23581 atgctgcccg aagacggcga accattgacc gatccttatg aaatccgcga gcgtttggaa
    23641 cacgccgtcg atttggtgat tgacggcggc tggtgcggaa ccgagccgac caccgtcgtc
    23701 gatatgaccg acggcacgga actggtgcgc cggggttgtg gcgatacggc ggtgttcggt
    23761 ttgtagggaa accgatgccg tctgaagcat cggctgttca gacggcattg cgcgccttgc
    23821 cggcggcagt ccgaaatgcc ggcgcgtatc gcgctcggtc ggaatatccg tttgaaacgg
    23881 cattttgatg cattactgca ccgcaatcgg aattctcggt tcgtagagca ggtcgtaggt
    23941 cggcttgttg agcaggtctt ggagcgtgaa accgtccaga tacgtgaaaa acgacttcat
    24001 tgcaccgccg agtatgcctg tcagacggca ggacggtgta atcaggcatt cgttgttcga
    24061 acccatacat tcgaccagct gcatcggttc gaggtggcgg acgaccgagc cgatgttgat
    24121 gcggtcgggc ggtgtggcaa gccgcagacc gccgcctttt ccgcgcacgc tgtggaggaa
    24181 gccgcctttg accagcgcgg taacgacctt catcagatgg cttttggaaa tgccgtaggt
    24241 tacggcgatg gtactgatgt tgaccagcgc atcgtcgttg atggcagtgt agataaggac
    24301 gcgcagcccg tagtccgtat gttgtgtcaa atacatgatt ttctcggtat ggattgttat
    24361 tcttatcggt acggtttaag gttcacggac aataccttaa tggttgaaac cctgtccgtc
    24421 ggggcggtag aatgcagcct gtctgcggcg gtatgccgtc tgaaacatcc gcgctaccgt
    24481 ttgagaattt gttattgtaa ctcaaaatca tgaaaccgtt gaaacgacat cccgccctta
    24541 tcgggctttc gcgtgaccac taccattcgc tttccctgtg cgtgcgtctg ttgcggacgc
    24601 cggaagaaag gcatcgggac gaactcgaac cgcatttttc cgaattggaa acccattttc
    24661 gcgaagaaga aaccaagttt gccccaattt ggcagaatgt cgcccccgaa ttgaaacaac
    24721 gtttcgagaa agaccacgcc cgactgcggc agatgatggc aagccccgaa tacggtaacg
    24781 cggcgtggaa taccgctttt gccacaaccc tgcgcgacca cgcgcgcttt gaagaacgcg
    24841 agctgtttcc cgccgccgaa ccgtttttgc cggcatgatt ccgttttgcg gcaaatatat
    24901 taatgataaa caaggaacac acatgaaatt taccaagcac cccgtctggg caatggcgtt
    24961 ccgcccgttt tattcgctgg cggctctgta cggcgcattg tccgtattgc tgtggggttt
    25021 cggctacacg ggaacgcacg agctgtccgg tttctattgg cacgcgcatg agatgatttg
    25081 gggttatgcc ggactggtcg tcgtcgcctt cctgctgacc gccgtcgcca cttggacggg
    25141 gcagccgccc acgcggggcg gcgttctggt cggcttgact atcttttggc tggctgcgcg
    25201 gattgccgcc tttatcccgg gttggggtgc gtcggcaagc ggcatactcg gtacgctgtt
    25261 tttctggtac ggcgcggtgt gcatggcttt gcccgttatc cgttcacaga atcaacgcaa
    25321 ctatgttgcc gtgttcgcgc tgttcgtctt gggcggcacg catgcggcgt tccacgtcca
    25381 gctgcacaac ggcaacctag gcggactctt gagcggatta cagtcgggct tggtgatggt
    25441 gtcgggtttt atcggtctga ttggtacgcg gattatttcg ttttttacgt ccaaacggtt
    25501 gaatgtgccg cagattccca gtccgaaatg ggtggcgcag gcttcgctgt ggctgcccat
    25561 gctgaccgcc atgctgatgg cgcacggcgt gatgccttgg ctgtcggcgg ctttcgcgtt
    25621 tgcggcaggc gtgatcttta ccgtgcaggt gtaccgctgg tggtataaac ccgtgttgaa
    25681 agagccgatg ctgtggattc tgtttgccgg ctatctgttt accggattgg ggctgattgc
    25741 ggtcggcgcg tcttatttca aacccgcttt cctcaatctg ggtgtgcatc tgatcggggt
    25801 cggcggtatc ggcgtgctga ctttgggcat gatggcgcgt accgcgctcg gtcatacggg
    25861 caatccgatt tatccgccgc ccaaagccgt tcccgttgcg ttttggctga tgatggcggc
    25921 aaccgccgtc cgtatggttg ccgtattttc ttccggcact gcctacacgc acagcatacg
    25981 cacctcttcg gttttgtttg cactcgcgct tttggtgtat gcgtggaagt atattccttg
    26041 gctgattcgt ccgcgttcgg acggcaggcc cggttgagac aaaccgccgc agatttcggg
    26101 tctgggcggt ttgcttttca gacggcaggg cggtcagttg ccgtccagcc agcggtcgcg
    26161 tgtggttttg gcttcttcaa aatagcggta cagggcttcg cggtcgtcgg tggtcaggat
    26221 gtttgccaaa acgtccaact gtttgcccaa gccttgaacc agttgcagca ggctgtcttt
    26281 gttggcaagg cagatgtccg cccacacggc gggatgaccg gaggcgatgc gggtgaagtc
    26341 ccgaaagccc gtggcggcga atttcagata ttcctgtccg tcggggtggt cgagaatctg
    26401 gtggacatag gcgaaggcgg tcaggtgggg catatgggag acggcggcga aaaccgcgtc
    26461 gtggcgttgc gcgtccatcg tataaatttc cgccccgacc gcgcgccaca ggttttctat
    26521 caaggcaatg ccgtctgaat gttcgccgcc gtgtggcgtg atgatgagtt ttctgtggcg
    26581 gaacagcccg aactgcgcgg cttgcgcacc gcttctgtcc gaaccggcaa tcgggtgggc
    26641 ggcgatgcag cggtgcaggc ggtcgggcag acagcggcgg aaggcttcga tgaccgaaga
    26701 tttggtgctg ccgacatcgg aaatccaagt gtgttccggc aaaacggggc gcagcgcggt
    26761 caaaatggcg ggaacggtgg cgacgggcgt ggcaatcagt accaagtccg caccgccgat
    26821 gctgtccgcg tcgatggcaa cggaagcccg gtcaatcacg ccgcgttcca atgcacgttc
    26881 gaggttgtcg cggtcggtgt cgataccggt aacggtgcgg acgagtccct gccttttgag
    26941 gtcgagaacg aacgaaccgc cgatcagccc tacaccgatg agggcaatat ggttcaaaat
    27001 gggcatttgt gtaaacggtt ttcgcaaagt accgtcatgg tagcctatcg gcggaatatg
    27061 ccgcaaggtc ggcaggaaaa aggagaagaa atggacaaaa tcagagttgc cgccgtgcag
    27121 atggtgtcgg gcgtgtcgcc ggaaaccaac gtcgccgcca tgaaacgcct ggtcgcacgg
    27181 gcggcggagc agggtgcgga ttgggtgctg ctgcccgaat attgggtgct gatgggcgca
    27241 aacgataccg acaaactcgc gcttgccgag cctttgggcg gcggacgctt tcagacggca
    27301 ttgagcgaaa cggcgaaaga atgcggcgtg gtgctgtttg gcggaaccgt gccgctgcaa
    27361 agccccgagg cgggcaaggt catgaatact ttattggtgt acgggcgcga cggcaaacgg
    27421 acggggctgt accacaaaat gcacctcttc ggcttttccg gtttgggcga acgctatgcc
    27481 gaagccgata ccatccgcgc gggcggggaa gtgccgcact tgtcggcaga aggcgtgccg
    27541 gtggcggcag gtatttgtta cgatgtccgc tttcccgaat ttttccgccg ccagctgccg
    27601 tttgacgtat tgatgctgcc cgctgcgttt acgcacacga cgggcaaggc gcattgggag
    27661 ctgctgctgc gcgcgcgtgc cgtcgaaaac caatgttacg tcgtggcggc ggcacagggc
    27721 ggtttgcacg aaaacggacg gcgcacgttc ggacacagca tgattgtcga tccgtggggc
    27781 gacgtgttgg acgtattgcc cgaaggcgaa ggcgttgtta cggcagacat cgatgccaac
    27841 cgcctgaaca gcgtccgcaa ccgcctgccc gccttgaaat accgggtttt ggatgccgtc
    27901 tgaaggttca gacggcatcg gtgccgggga atcagcgggc tgtaggatgg gcttcagcct
    27961 gccatttcca tcaatcccac atttctaccg ttttcatcga atccatcgaa tccgcccctt
    28021 tcgacgcccc agtcctacgc aactgaaccg tcattcccac ggaagtggga atctagaatc
    28081 tcgggggttt cagtcatttc cgatagattc ccgccgcgtc ggaggtctgg attcccgcct
    28141 gtgcgggaat gacgaatcca tccatacggg aacctgcacc acgtcattcc cacgaaagtg
    28201 ggaatctaga atctcggggt ttcagtcatt tccgatagat tcccgccgcg tcaggggtct
    28261 agattcccgc ctgtgcggga atgacgaatt tcaagattac ggtgttgtcg gaacgcaact
    28321 gaatcgtcat tcccacggaa gtgggaatct agaatctcgg ggtttcagtc atttccgata
    28381 gattcccgcc gcgtcgtggg tctggattcc cgc
//
LOCUS       DBBZYD010000015        28108 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.015, whole genome shotgun sequence.
ACCESSION   DBBZYD010000015 DBBZYD010000000
VERSION     DBBZYD010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28108
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.015"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(54..362)
                     /locus_tag="ACJJDL_000533"
     CDS             complement(54..362)
                     /locus_tag="ACJJDL_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573305.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHNHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLADLDKELC
                     "
     gene            complement(346..648)
                     /locus_tag="ACJJDL_000534"
     CDS             complement(346..648)
                     /locus_tag="ACJJDL_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HGG7573306.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(722..3085)
                     /gene="pheT"
                     /locus_tag="ACJJDL_000535"
     CDS             complement(722..3085)
                     /gene="pheT"
                     /locus_tag="ACJJDL_000535"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HGG7573307.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVIAEVKSVEKHPDADRLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQIDAPADCGRFI
                     SRVIENVNARATTPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAARGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNANFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGNVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3121..3639)
                     /locus_tag="ACJJDL_000536"
     CDS             complement(3121..3639)
                     /locus_tag="ACJJDL_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573308.1"
                     /translation="MSEIINLTESGITFNLVKNNLFYIEPYIRKRRQEGIKTVEFIYL
                     QEDNLLFVEAKQSIPNQERSPERFDEYISEIYQKWCNALNVEILGILGREDIKETIMP
                     SAFSNLQWGSIEIKLLLVIPDVPLNYLGQLNELIKQEFNKKDTLRLISLWNISVEVIN
                     RDLAIQKGLASS"
     gene            complement(3646..4710)
                     /locus_tag="ACJJDL_000537"
     CDS             complement(3646..4710)
                     /locus_tag="ACJJDL_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG7573309.1"
                     /translation="MIKSFELENFGPISLLKADNLGKINLIIAENSKGKTFILKALYS
                     VLKSHEEAHKGKNIRDFSEELRDKLYWTFQVEEIGDLVTRGKENPNERPLKLSMTLED
                     SSSVLFSFGRTTKKLIKPELYELSPRINANSIFLPPKEVLSLFDVIKKSEEEKRFGFD
                     ATYIDLVKALDIKPTKGRNYPEAAEARKDLEALFGGYVSYNDKKKAWVYEKDRQTFSI
                     NSTAEGVKKIGILDTLLGNRFLSPGSILFIDEPEANLHPKAINQFLEILFSLSKSKLG
                     IQIFMSTHSYFVIKKLCLLARKHSESIPVFMPGKEKEQTTWVQENLQNSMPDNEIIGE
                     SIRLFREEIGVLSPETAWIG"
     gene            complement(4887..5879)
                     /gene="pheS"
                     /locus_tag="ACJJDL_000538"
     CDS             complement(4887..5879)
                     /gene="pheS"
                     /locus_tag="ACJJDL_000538"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HGG7573310.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
     gene            complement(6225..6584)
                     /gene="rplT"
                     /locus_tag="ACJJDL_000539"
     CDS             complement(6225..6584)
                     /gene="rplT"
                     /locus_tag="ACJJDL_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HGG7573311.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(6597..6794)
                     /gene="rpmI"
                     /locus_tag="ACJJDL_000540"
     CDS             complement(6597..6794)
                     /gene="rpmI"
                     /locus_tag="ACJJDL_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HGG7573312.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(6941..7462)
                     /gene="infC"
                     /locus_tag="ACJJDL_000541"
     CDS             complement(6941..7462)
                     /gene="infC"
                     /locus_tag="ACJJDL_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HGG7573313.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(7480..9393)
                     /gene="thrS"
                     /locus_tag="ACJJDL_000542"
     CDS             complement(7480..9393)
                     /gene="thrS"
                     /locus_tag="ACJJDL_000542"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HGG7573314.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGIVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLGAEYVTENNDRSRPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(9447..9523)
                     /locus_tag="ACJJDL_000543"
     tRNA            complement(9447..9523)
                     /locus_tag="ACJJDL_000543"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9487..9489),aa:Val,seq:gac)
     gene            9702..10817
                     /gene="tgt"
                     /locus_tag="ACJJDL_000544"
     CDS             9702..10817
                     /gene="tgt"
                     /locus_tag="ACJJDL_000544"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HGG7573315.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLKGLEELDFPGLAIGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            10827..11909
                     /gene="hemH"
                     /locus_tag="ACJJDL_000545"
     CDS             10827..11909
                     /gene="hemH"
                     /locus_tag="ACJJDL_000545"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HGG7573316.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFFPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            12101..12502
                     /locus_tag="ACJJDL_000546"
     CDS             12101..12502
                     /locus_tag="ACJJDL_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7573317.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(12565..12855)
                     /locus_tag="ACJJDL_000547"
     CDS             complement(12565..12855)
                     /locus_tag="ACJJDL_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573318.1"
                     /translation="MAKYFTETGISVREYFDFFGEFVVLPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGDGNIGSMGLKVPR"
     gene            complement(13008..13328)
                     /locus_tag="ACJJDL_000548"
     CDS             complement(13008..13328)
                     /locus_tag="ACJJDL_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HGG7573319.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLPARLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYSRIEMQSDTVLQAGIWRGTSCPT
                     ARSI"
     gene            13524..14250
                     /locus_tag="ACJJDL_000549"
                     /pseudo
     CDS             13524..14250
                     /locus_tag="ACJJDL_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            14319..15857
                     /gene="lnt"
                     /locus_tag="ACJJDL_000550"
     CDS             14319..15857
                     /gene="lnt"
                     /locus_tag="ACJJDL_000550"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HGG7573320.1"
                     /translation="MFSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFSLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            16121..16984
                     /gene="rpoH"
                     /locus_tag="ACJJDL_000551"
     CDS             16121..16984
                     /gene="rpoH"
                     /locus_tag="ACJJDL_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HGG7573321.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            17468..18352
                     /locus_tag="ACJJDL_000552"
     CDS             17468..18352
                     /locus_tag="ACJJDL_000552"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HGG7573322.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDTENSRQSLELNSDLVNQLAEINKNLR
                     KHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLVEAVGDINNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIDEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(18436..18951)
                     /locus_tag="ACJJDL_000553"
     CDS             complement(18436..18951)
                     /locus_tag="ACJJDL_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG7573323.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLYLLRLRF
                     IWACIFIVFIPMLAYAGLRHLLGISPKDAFGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(19027..19446)
                     /locus_tag="ACJJDL_000554"
     CDS             complement(19027..19446)
                     /locus_tag="ACJJDL_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573324.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(19567..20565)
                     /gene="holA"
                     /locus_tag="ACJJDL_000555"
     CDS             complement(19567..20565)
                     /gene="holA"
                     /locus_tag="ACJJDL_000555"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HGG7573325.1"
                     /translation="MAAHIGHIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIE
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHTVNIDEAQTAVANVARFDVFQLAGA
                     WMKGDVPRVCRLLDGLQEEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNGLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEEGDAWTVFKRLVVSLAE"
     gene            complement(20567..21046)
                     /gene="lptE"
                     /locus_tag="ACJJDL_000556"
     CDS             complement(20567..21046)
                     /gene="lptE"
                     /locus_tag="ACJJDL_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HGG7573326.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            complement(21098..21877)
                     /gene="pgeF"
                     /locus_tag="ACJJDL_000557"
     CDS             complement(21098..21877)
                     /gene="pgeF"
                     /locus_tag="ACJJDL_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HGG7573327.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDDPEAVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALGGTPDADAS
                     VDDTGKAACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            22052..22165
                     /locus_tag="ACJJDL_000558"
                     /pseudo
     CDS             22052..22165
                     /locus_tag="ACJJDL_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            22444..23391
                     /locus_tag="ACJJDL_000559"
     CDS             22444..23391
                     /locus_tag="ACJJDL_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HGG7573328.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMAYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(23544..24668)
                     /gene="rluD"
                     /locus_tag="ACJJDL_000560"
     CDS             complement(23544..24668)
                     /gene="rluD"
                     /locus_tag="ACJJDL_000560"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HGG7573329.1"
                     /translation="MQNTSFDNESDYSDDSDFASASGTENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVQQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAADPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPKTGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            24667..25470
                     /locus_tag="ACJJDL_000561"
     CDS             24667..25470
                     /locus_tag="ACJJDL_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HGG7573330.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(25528..27747)
                     /locus_tag="ACJJDL_000562"
     CDS             complement(25528..27747)
                     /locus_tag="ACJJDL_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HGG7573331.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVFPFAPLQQAGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQTGIVPSLNASGIRYLDYLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         6951 a         7970 c         6590 g         6597 t
ORIGIN      
        1 tattttttag cgtgtaaaac aaaaccggct gcatacctgc aaccggcctc aaatcagcac
       61 aattccttat ccaaatccgc caacaggtct ttcagaccgt ctccgatttc ctgaagcgta
      121 accggacggt tgccgtccga acccgattcc gcaccttctg catacggtgc aaacgtgctc
      181 tgcaatttca acagtttcac cacatccaaa cgggtgtagc gttcgccgcc gtaaccgaca
      241 accacaccgt gattatgctg ccattgcgca aaaccatagg ggctgatttg caacagtccg
      301 cacaactcgt ccagcgtgaa atagcgtttt gcgggaacct tcaaatcaac gttgtttgtc
      361 atagtagtgt tccaccatgc ttttgagttt ctggctggca tggaaagtta ccacgcggcg
      421 ggcggtaatc ggcacttcct cgccggtttt aggattacga cccgggcgtt gcggcttgtc
      481 gcgcaactgg aaatttccga aaccggaaat tttgatttct tcgccgcttg ccaaagtgct
      541 gcggatttct tcaaaaaaga gttcgacgat ttctttggca tcgtttttgg tgacgttgct
      601 gactttgtct accaaaatat cggccagttc tgctttagtg agagtcatat gattaccttc
      661 tgttgtaaca gttgtggatt attaccaatt tttatttaaa attcaagcga atatttattt
      721 tttaactgcg aagccgcgcc cctgccgccg ttgccgcgcc aatcagtttt ccgataagcg
      781 gctcgaccgc ctcatccgtc agcgtgtttt ccatatcctg caaaatcact ttgaccgcca
      841 cgctcttcat cccttcgggc agtcccgtgc cgcgatacac gtcaaacacg ctgatttcct
      901 gtaccaactt gtttgccgcg cctttcaaga caagcagcaa atcatcatgg ctcatagctt
      961 ccggcatcac aaacgccaaa tcgcggcgca ccggctggaa tttcgatacg gcccgatagc
     1021 gcgttttccc gcattccaac acggccgcca tatcgatttc aaataccagc ggcgcttgcg
     1081 gcaggtcgta tttttgcagc catttcggat gcagttcgcc gacaaagccg atgacgttgc
     1141 cgtctgaaac gatattggcg gcgcgtccgg gatgcagggc aggatgtccg gttttaacga
     1201 actcgaccgc tttgtttttc aacagatttt ccacatctgc cttaatgtcg taaaaattcg
     1261 cattgcgcgt tttcccgccc cattgttcgg gcattgccgc gccgtaccac aagccgccga
     1321 tgcgttcgtt ttggacaaac cggccgtctg aacctttgcc gaacacgcgg gcgatttcaa
     1381 acacgcgcac gcggttttgt ttgcggttca ggttgttttg caaaatttcc accaagccgc
     1441 cgatgagtgt ggaacgcatc acggcatatt gcgccgccag cgggttttgc aggcggatgg
     1501 ggtcggcgtt ggcggcaaaa tcttgttccc actgctcgtc aacgaaggca tagctgacca
     1561 cttcgcggta gccgcgcgcc gccatttcgt tgtaaacggc aaaacgcggg cggcgtgttt
     1621 cgggcagttc cagcattttc agacggcctg acgtgtaatc gtcggggatg ttttcatagc
     1681 cgtaaacgcg tccgatttct tcaatcaaat cagcctcaat ttcgatgtca aaacggaagc
     1741 tcggcgcggt aacgcggaag ccttccgccg ttttctcggg ctgcaggccc aagtgttgca
     1801 aaatggtttc cacctgttcg gcaggaatgt ccacgcccaa cacggttttc agacggccca
     1861 aacgcaatcc gacctgcttc gcttcgggca attcgccttg cgcttccacc atttcgcctg
     1921 ccgcaccgcc gcaaatctgc aacaccaatt cggtagcacg ctcaatggca tccgcctgca
     1981 aacggtaatc cacgccgcgc tcgaagcgga acgacgaatc cgaaccgaaa ccgtattggc
     2041 gcgatttgcc ggcgatgatt tcgggcgcaa accaagccgc ttccagcacg atattttgcg
     2101 tgccgtctga aaccgcgctc gccgcgccgc ccattaagcc cgccaaactc aacacgcctt
     2161 tttcgtccgc cacgaccagc gtgttttcag acagggaaac ggttttctcg ttcaggcatt
     2221 ccagcgtttc cccttcgcgc gcgcggcgga tgtgcaggct gccggaaagt ttgtcggcat
     2281 caaaaacgtg catcggctga ccgatttcca gcatcacata attgccgatg tccaccagcg
     2341 cggaaatact gcggatgccg ctgcgctcca aacgttgttt catccaatcc ggcgtagtag
     2401 cgcgcgcgtt cacgttttca atcacacggc tgataaagcg accgcaatcg gcaggcgcgt
     2461 caatctgcac gggctgtttt cgactgcccg tgatcggcgc ggtatggatt tcgggctgcc
     2521 tgaacgcgca ccccgtcaat gcggacactt cgcgcgcaat gcctttgatg ctcaagcagt
     2581 cggcgcggtt aggcgtaatt ttcaacgtaa acagcgtatc gtccaaatcc aagtattcgc
     2641 ggatattggt accgacgggc gcatcttcag gcagaatgtg caggccgttc acaccgtcgt
     2701 cgggcagacc gagttcgtcg gtggaacaca acatcccgtc cgacaccacg ccgcgcattt
     2761 tggtcggctt gattttgaaa ttgcccggca acactgcgcc cggcaacgaa cacggcactt
     2821 tgatgcccgc tttcacattc ggcgcaccgc acacaatctg caccaacccg cccgtacccg
     2881 catcaactcg ggtaacgttc aaacggtctg catccggatg tttttcaacg gatttcactt
     2941 cggcaatcac cacgcccgca aacgcaggcg cggcagtttc ggcctcttcc acttccaagc
     3001 cggacatcgt taacagatgt tccagcttat cggaggaaag ttcggtatcg gcttgggttt
     3061 tcagccatga ataggagaat tgcatgttat gttctcaatc aattaattaa ctttagattt
     3121 tcaagagcta gctaaacctt tttgaatggc taagtcccta ttaattactt ctacagaaat
     3181 gttccataaa gaaatcaacc gcaaagtatc tttcttatta aattcttgct ttattaattc
     3241 attcaattgc ccaagataat taagcggcac atccgggata accagtaata atttgatttc
     3301 tatgctaccc cattgcaaat ttgaaaaagc actaggcata attgtttctt tgatatcttc
     3361 tctgcctaat attcccaaaa tttcaacatt taatgcatta caccattttt gataaatctc
     3421 tgaaatatat tcatcaaaac gctcaggaga tctttcttga tttggaatac tttgttttgc
     3481 ctcaacaaat aacaaattat cttcttgcag atagataaac tctactgtct taataccttc
     3541 ttgccttctc ttccggatat atggttctat ataaaacagg ttatttttta ctagattaaa
     3601 agttatacct gattcagtga gatttattat ttcactcata aaaacctaac caatccatgc
     3661 tgtttccgga gataaaacac ctatttcttc tctgaacaat cgaatagact caccaataat
     3721 ttcattatcc ggcatgctat tttgtaaatt ttcctgcacc caagtagtct gttccttttc
     3781 tttgccaggc ataaaaacag gaatactttc actatgcttt ctagctaata aacacagctt
     3841 cttgataaca aaatatgaat gcgtactcat aaaaatctgt attcccaatt tggatttaga
     3901 taaggaaaac agaatttcta gaaattgatt aattgctttc ggatgtagat tagcttctgg
     3961 ctcatcaata aataagattg atccaggact caaaaaccga tttcctaata gagtgtctaa
     4021 tatcccaatc ttttttaccc cctctgctgt agaattgata gagaaagttt gtctatcttt
     4081 ttcatatacc catgccttct ttttatcatt gtagctaaca taaccgccaa acaatgcttc
     4141 tagatccttt ctagcttccg ctgcctcagg gtaattcctc ccttttgttg gtttaatatc
     4201 caatgctttt accaaatcaa tgtaagtagc atcaaaacca aatctctttt cttcctctga
     4261 ttttttaatt acatcaaata gtgatagaac ttctttgggt ggtaaaaaaa tagagttagc
     4321 gtttattctg ggagaaagtt cgtatagctc cggtttaatt agctttttgg tagttctacc
     4381 aaaagaaaac aaaactgaag aactatcttc taaagtcata cttaacttaa gaggccgttc
     4441 gtttggattt tcttttcctc ttgtaactaa atcaccaatt tcctctactt ggaacgtcca
     4501 atatagctta tctcgcaatt cctcagaaaa atcacgaata ttctttcctt tatgagcttc
     4561 ctcatgactt tttaaaacac tatataatgc ctttaaaata aaagttttcc ctttgctatt
     4621 ttctgcaata attaaattta ttttccctaa attatcagcc ttcaataagc taatcggccc
     4681 gaaattttca agctcaaatg atttaatcat ataatccccc taatatatat caacaatatt
     4741 tgtacaagcc acattgtaaa aagacagcaa ccacagcacc atagtaaacg catagcaggc
     4801 ggataatgga gcgacatagc gtttcatgat ttagctttct gaggtaggca caggctgctt
     4861 ttttcatttt taggcagcct acacaatcat tttacaaact gcttcaaaaa attcaaatcg
     4921 ttatcaaaaa acaagcgcaa atcgttcacg ttgtaacgca gcatcgcgaa acggtcgaga
     4981 ccgataccga aagcgaaacc ggtgtatttt tcagaatcga tattcacatt tttcaacacg
     5041 ttgggatgca ccatgccgca gccgccgact tccagccatt tgccgttttc tcccataatg
     5101 tcgatttcgg cagacggttc ggtgaacggg aagaaagacg ggcggaaacg tacttgcaaa
     5161 tcatcgcgtt caaagaagcg acggataaaa tccgtgaaca ctgcttttaa gtcggcaaaa
     5221 gttacgccct cttctaccca caaaccttcc gcctgatgga acataggcga gtgcgtggca
     5281 tcgctgtcca cacggtaaac gcggccgggg gcgataatgc ggatgggcgg ctctttttta
     5341 tcgagcatat agcggatttg aatcggggaa gtgtgcgtac gcaaaacatc accgttttca
     5401 acgtaaaacg tatcctgcat cgcacgggca ggatggtttg cagggatgtt cagggcttgg
     5461 aaattgtgaa aatcgtcttc gatttcaggc ccgtccgcca cttcgaaacc cattccgtga
     5521 aagagttcga ccacacgttg caaggtcagg gttacgggat gcaggctgcc gccttcctga
     5581 gcgcgtccgg gcagggtaat gtcgagggct tcggcggcaa gtcgggcttg cagcttggct
     5641 tcgttgaggg catcgcgttt ggcattaaaa gccgtctgaa accggttttt gcattcattg
     5701 atatgcgcac ctatggtttt gcgctcttca ggcgacattt gccccaaagt tttcagaagt
     5761 ccggtcaact cgccggtttt gccaagataa cgggctttga tttgttctag agcgttgaag
     5821 tcttgcgcag cttctactgc ggcaatgcct tctgcaacga tgcggtttac attttccata
     5881 atatcaagtc tgtcaattaa tgatatgcca cctgaaacaa cgaggccgcc tgtatagcct
     5941 gacatatcag actcttcaga cgaccttatt ttcttcacgg tcaatccatt ggataaattt
     6001 tctgtatagt ggattaaatt taaaccagta cggcgttgcc tcgccttgcc gtactatctg
     6061 tactgtctgc ggcttcgtcg ccttgtcctg atttaaattt aatccactat attttaacgc
     6121 aaatttattt aaaaaaatag actttaaaga aagaaaatca atcacataga atttctgcaa
     6181 acaaagaaaa aaggaagccg cagcttcctt ttcaattttt tggattaagc agccaaagca
     6241 gctttggctt tttcaaccaa ttgtgcaaaa gcggctttat cgaacacggc caaatcagcc
     6301 aatactttgc ggtcgatttc gatagaggcg cgtttcagac cattcataaa tttgctgtaa
     6361 gacaacccgt tttcacgcgc acctgcattg atacggacaa tccacaattg acggaattgg
     6421 cgtttgcgtt ggcggcggtc gcggtatgcg tattggccgg ctttcattac cgcctgcttg
     6481 gcaacgcggt aaacgttttt acgacggccg cggtagcctt tggctaacgc gaagattttt
     6541 tggtgacggg cacgggcggt aacaccgcgt tttacgcgtg gcatattcta aactccttaa
     6601 gcgtagggta acattttagc aacagaagcc aaatcgcgat catttaccat agaggtaccg
     6661 cgcagttggc gtttgttttt ggtggtcttt ttagtcaaga tgtggcgttt gaacgcatga
     6721 gcgcgtttca caccgccgtt acccagtact ttaaagcgtt ttttcgcgct agacttggtt
     6781 ttcattttag gcatgggaaa actccattcg ttatcagata aggcattagg gggttttaaa
     6841 acatcggttt caaacacttg aacccacaat accacggttt tttgccgcaa ttgaaaactt
     6901 actccgaagc ggcaatcgga gtaagcggag aattatagct ttattttttc ttcggcgcaa
     6961 tcatcatcac catttggcga ccttccattt tgggaaagga ctcgatttgc gccacttcag
     7021 ccaaatcttc tttcacacgt tccaaaagtt gcgcgccgag ttgctggtga gccatttcac
     7081 ggccgcggaa acgcaatgtc actttgactt tatcgccgtc ggcaaggaag cggttgatgt
     7141 tgcgcatctt gatttgataa tcgccctcat ccgtacccgg acggaatttg atttccttga
     7201 tttgcacctg cttttggttt ttcttggctt cgtcgcgttt cttggcctgc tggtatttgt
     7261 atttaccgta atccatcagt ttgcacacag gcggtttagc agttggggaa atctctacca
     7321 aatcgacatc ctgcccttcg gccatagcca aagcttcacg aactgaaaca acaccaagct
     7381 gttcgcctga ctcactgatt aaacgcactt ctttggcggt aatttcgccg ttgattcgtg
     7441 cttcgcgttc ttgagcgatg atgaatactc ctataaaaat taatgattga cgagggcatc
     7501 agtgatttct tgctgcaatt gcgcaatgaa atcatccaaa tccaaagaac ccaaatcttc
     7561 tgctttgcgg cgtaccgcca ctttgttttc ctgcttctcc ttatcgccga caacgatttg
     7621 ataagggaaa cggtattggc tgttgtcgcg gattttgtaa ccgatttttt cgttacgcaa
     7681 atccaactcg gcgcggaatc ctgccgcctg caatttggca gccacttccc gacaataatc
     7741 tgcctgattt tcggtaatat tcataatcac catttgaacc ggagccaacc ataacgggaa
     7801 agagcctgca tggttctcaa tcagaatgcc gataaatcgc tccaaagaac ctaaaatggc
     7861 gcgatgcaac ataacaggtc gcgagcggtc gttgttttcg gttacatatt ctgcacccaa
     7921 gcgttccggc aagacgaaat ccagttgtaa tgtaccgcat tgccaagaac gacccaaggc
     7981 atctctgaca tgatattcga ttttaggccc gtaaaacgca ccctcgcccg gcaattcgcc
     8041 ccattccacg ccgcaggcag tcaatgcctc gcgcaaaccc tgctctgcct tatcccacac
     8101 gtcatctgaa cctgcacgtt tttcagggcg aagagaaagc ttgacggata catcatggaa
     8161 accgaactgt ttgtagatgc gaaccaacaa ttcattgaac gcacgggcct cgctgacgat
     8221 ttggtcttcg gtacagaaaa tatgcgcatc atcctgcaca aatccacgga cccgcatcag
     8281 accatgcaat gcaccgctcg gctcgttgcg gtggcaggaa ccgaattccg ccaaacgcat
     8341 cggcaaatct cgatacgaac gcaaaccgtt gttaaaaatt tgaacatgac ccggacagtt
     8401 catcggttta accgcatatt cgcgtttttc cgaactggtt acgaacatat tatctttgta
     8461 gttgtcccaa tggccggatt tttcccaaaa ggttttatcc atgatttgag gcgttttgac
     8521 ctctttataa ccggcggcgt tcagttcttt acgcatatgc tgttcaatca cttgccacaa
     8581 agcccagcct ttaggatgcc aaaacactat gcccggcgct tcgtcttgca gatggaacag
     8641 atccaattgc ttgccaagct tgcggtggtc gcgcttttcg gcttcttcga tacgttgaat
     8701 ataggctttc aactcgtctt ttgtcgccca agccgtaccg tatatgcgtt gcagcatttc
     8761 attattgctg tcgccgcgcc agtatgcgcc cgccagcttg gtcagtttga agtttttcag
     8821 gaaacgggta ttcggaacgt gcggaccgcg gcacatatcg acatattcct ggtgatgata
     8881 catccccatc gcttccactt cgggcatatc gtcaatcagg cgcagtttgt attcttcgcc
     8941 gcgctcttga aaaattttaa tcgcctccgc acgcggagtc atgattttga ccacatcata
     9001 gtcttgggca atcaattctt tcatacgcgc ttcaatggcg gcaacatctt ccggtgtaaa
     9061 cggtttttcc gtggcgatgt cgtaataaaa gccctcttca atgacggggc cgataaccat
     9121 ttttgcatta ggatagagtt gcttgacggc atgcccgaca agatgggcgc aggaatggcg
     9181 gatgatttcg atgccttcct gatctttcgg agtaatgatt tgaacagcag aattttcaac
     9241 aatcgggtcg cacgcatcga ccaatttgcc gtttaccctg cctgccaccg ccgccctcgc
     9301 caaaccgaca ccgatagacg cagcaatttg agccacggta acgggggatt cgtattggcg
     9361 gactgagccg tccggcaagg taatgttcaa catcaaaaag ctccaaaaca ttaaaaaata
     9421 acggcataaa tgccgttatg ggaatttggt aggcacgatt ggattcgaac caacgacccc
     9481 caccatgtca aggtggtgct ctaaccaact gagctacgtg ccttcaaaga atttttgcat
     9541 tttatcgggt cgttttaatt tttgcaagag gtatgtgcat ttctttatgc aacattgtgg
     9601 caagatttgg ggatgtcgtc tgaaaaaccg tgggaattca tttataatgc cgtcttttaa
     9661 aacatatttc gccccctgtc gcccaactga cattcaatct tatgcttaaa tttaccttac
     9721 acaaaaaaga cggatacgcc cgacgcggca cgctggagtt gaaccacggc aaaattgaaa
     9781 cgccggtatt tatgcctgtc ggtacttacg gctcggttaa ggcgatgaac ccgcaaaacc
     9841 tgcacgacat caaggcgcaa attattttgg gcaacactta tcatttgtgg ctgcgtccgg
     9901 gcttggaggt cgtcgaacag tttggagggc ttcacggctt tatcggctgg gacaaaccga
     9961 ttctgaccga ctcgggcggt tttcaggttt tttctttgtc ggatatgcgc aagctgacgg
    10021 aagaaggctg tacgttcaaa agcccgatca acggcgacaa gctgttttta tcgcctgaaa
    10081 tttccatgaa aatccaaacg gttttgaact cggacatcgc gatgcagctg gacgaatgca
    10141 cgccgggcga ggcgacgcgc gaacaggcgc gaaaatcgtt gcaaatgagc ctgcgctggg
    10201 cggaacggag caaaaaagcc tttgaagatt tgaaaaaccc gaacgcactg ttcggcatcg
    10261 tgcaaggcgc gatgtatgaa gatttgcgcg aagagtcgct gaaaggcttg gaagagctcg
    10321 atttccccgg cttggccatc ggcggcttgt ccgttggcga acctaagccc gaaatgtacc
    10381 gcatgttgcg cgccgtcggc cctatcctgc cggaacacaa acctcattat ttaatgggcg
    10441 tcggtacgcc tgaagactta gtgtacggcg tggcacacgg cgtggatatg ttcgactgcg
    10501 tcatgcctac tcgcaatgcg cgtaacggct ggctgtttac ccgttttggc gatttgaaga
    10561 tcaaaaacgc caaacacaag ctcgacaagc gtccgataga cgaaagctgc acctgctacg
    10621 cctgccaaaa cttcagccgc gcctacctgc accatctgca ccgcgccggc gaaatcttgg
    10681 gcgcacagct caacaccatc cacaacctgc atttctacca agtcattatg gcggaaatgc
    10741 gcgatgccat agaacaaggc aaatttgccg actggcaggc gcgattccac gaaaaccgtg
    10801 ctcgcggcac agactgactc ccggcaatgc cgtctgaagc cgcttcagac ggcattttgc
    10861 cgctttaccc tacccgcact atttttcaga aaccgatcat gcttccattc tttccagaac
    10921 cctccctttc ctatacgcaa caaaaccgta ccgccgtttt gctgttgaac ctcggcacgc
    10981 ccgacgcgcc gaccgcgcag gcggtacgac cttatctgaa gtcctttctg accgaccggc
    11041 gcgtcgtcga actgcccaaa tggctgtggt atcccattct gcatggtctg gtactgacgt
    11101 tgcgccccaa aaaaagcgcg cacgcctatg aaaaaatctg gtttaaggaa ggttcgcccc
    11161 tagaagttta cacagcacgc caagctgccg cgcttgccga acgtatgccc gacctcatcg
    11221 tccgccacgc catgacctac ggcaatcctt cggtggcaga cgtattgtcg gaactgaagg
    11281 cgcaaggcgc gggcagactg ctggtcatcc cgatgtaccc gcaatatgcc gcttccagca
    11341 gcggagcggc agtagataag gtgtgcgaac aattactgct gcaacggaac caaatgagcg
    11401 tccgcaccgt ttcgcgcttt tatgacgata ccggctacat tgatgcgatg aaaaaccaca
    11461 tcctccgata ttgggcggaa cacggacgtg ggaaaaaact gatgttgagt tttcacggcg
    11521 taccgcagaa gcactacgac ctcggcgacc cctatcccga cgagtgccgc cacaccgcca
    11581 aactgcttgc cgaagcactg gaactgaccg aagaccaata tgtcgtatcg ttccaaagcc
    11641 aattcggcag ggcaaaatgg gttacaccga gcacgcagga tttgttcggc aaactgccca
    11701 aacagggggt aaccgagctg gacgtattct gcccgggctt tttggcagac tgtttggaaa
    11761 ccatggaaga aatcgccctg atggggcggg aacagtttta cgaagcaggc ggcaaaagct
    11821 accgctacat cccctgcctc aacgacaacc ccgactggat agacgcactc gtcgcacttg
    11881 ccgaagaaaa ccttggcggc tggcgttgaa actgtttgac ccatgtctaa aatgccgtct
    11941 gaacgccgtg ttcagacggc attttcccgc tactttagcg tatgatggca tctatgccgg
    12001 acaacaacat caagtgcaac cttactaccg attcggcaaa aaaatctttc acccgctacg
    12061 caaaatcaac aacaaggttt caaacattaa ggaaacacca atgaacacaa cccgactgcc
    12121 gaccgccctc gtcttgggct gcctctgcgc cgccgcttct gccgccgaca acagcatcat
    12181 gacaaaaggg caaaaagtgt acgaatccaa ctgcgtcgcc tgccacggca aaaagggcga
    12241 aggccgcgga accatgtttc cgccgctcta ccgctccgac ttcatcatga aaaaaccgca
    12301 ggtgctgctg cacagcatgg tcaaaggcat caacggtaca atcaaagtca acggcaaaac
    12361 ctacaacgga ttcatgcccg caaccgccat cagcgatgcg gacattgccg ccgtcgccac
    12421 ttatatcatg aacgcctttg acaacggcgg cggaagcgtt accgaaaaag acgtaaaaca
    12481 ggcaaaaggc aaaaaaaact aaacagacaa aatgccgtct gaaaccggca atccggcttc
    12541 agacggcatt caaatcaaac ctttctaacg cggtactttc agccccatag acccgatatt
    12601 gccgtccccg tcaacctcct tcgcggtcag cataaagccg ccgatgtcaa tacggccgca
    12661 ctcgaccggc tcctgactgt cggaacgctt atcgaaaagc tcggcaaggc tcaaaccctc
    12721 ttcgcccgct tccagcctca aaccgtaagc aagtgccaaa tcacccgaac gtgctgccgg
    12781 caaaacgaca aactcaccga agaaatcaaa atactcacgg acgctaatac ccgtctcggt
    12841 aaagtatttc gccattttat agtgaactaa atttaaacca gtacggcgtt gcctcgcctt
    12901 agctcaaaga gaacgattct ctaaggtgct gaagcaccaa gtgaatcggt tccgtactat
    12961 ttgtactgtc tgcggctcgc cgccttgtcc tgatttttgt taatccacta tatcgacctt
    13021 gccgtcgggc aggatgtacc acgccaaatc cccgcctgaa gcacggtgtc ggactgcatt
    13081 tcgattcggc tatacgcctt ttcacgcagg ctgtaattga atttccacaa accgccgaac
    13141 actgccggcg gacgcgcgac cagcatcagg aacgccgcaa tcgccaaggc ttccgccgcc
    13201 ccgtccaaca cgccggcggg agaaaccagc agcaaaggca ttcccaaacg tgcgggtaaa
    13261 gtggtcgaaa ccacgctcag aaacaacagt gcgccacccg gcaggaacag actgcccatc
    13321 caatccacgc taacgattct cccttaaaat tcatgaaatt aaaatcgaaa gactgtaaca
    13381 cggcattttc ttttcacgaa actttacttc acgtccgcca cagcgttcag acggcatttt
    13441 cctgtttcat gccgcctgaa accgcccaaa tccgcgttct cctatataat gtcggacttt
    13501 gcgccgcatt tcaggattct ttaatggcat ttgcctcact atttaccctg ccggacgaca
    13561 tcaccgccgt tttggacgat gttgccctga tgaccaaagc cgccgcaaag aaaaccgccg
    13621 gcgtggtcgg cgacgatttg gcacccaatg ccaaccgggt tacgggcgta tcggcagaac
    13681 gcgagttgcc gattgtttgg tcgatggcga aaggttcttt ttccaacaag ccggttttgg
    13741 tgcctgcggc cctgctgctt tccgccttcc tgccgcaact cattacgccg cttttgacgg
    13801 caggcggcat ttatctgtgc tttgacggcg tagaaaagct gctgcacaag tttctgcacc
    13861 gacatgacgc gcatgctcgt aatggcggca atcggcatcg gcatgactgt tttggtgtac
    13921 ggaatcgttg ccgtcatcgt caaactcgac aacttaggca tgctgctgat gcgccgccca
    13981 caaacctttt cgcgcagttt ggggcaaatg ctgactgcct ttatgccttg ctttatgcgc
    14041 ggtttgagcg tggtcggcac gcttgccatg tttcttgtcg gcggcgtact ggtcgcccac
    14101 aacctcggcc ttctgcacga tttcctgcac gcgcaacact gggacgctgg ctgggcggag
    14161 tacttcgcca acctcgttgt cgggctgctt tccggttcga ttgcctgcgc ccccgccttg
    14221 ccgctgatga atcgtttcgg caggcattga tttctttttc aaataccgat gccgtttgaa
    14281 agatgttcag acggtatctt ccgaacagac agatgaatat gttttccaaa ctggacaaat
    14341 actggcagca ccccgccctc tactggcctt tgctcatcct ttttgccgcc gccaccccct
    14401 ttaccttcgc accctactac cacttttggc tgatgccctt gattttcggt gccttcgtcc
    14461 gcctcatcga actgcgtccg cgttttgctg tctcttccgc ctacctgttc agcctgaccg
    14521 catacacgac acagttctac tggatacaca ccgccctgca cgacgtttcc ggcctgcccg
    14581 acctctatgc cgtaccgctg actttcctac tccccgccta ccttgccctt tatccggcac
    14641 tgtgtttctg gctgtggaaa aaatttaccc tgcctcgggg cataaaaatc ggtttggtac
    14701 tgcccatcct gtggacactg accgagtttg cccgcgaacg tttcctgacc ggattcggct
    14761 ggggcgcaat cggctactcc caaatcaccc cggacagccc gctcgccggc tttgccccat
    14821 tgggcggcat ccacatggtt acactggcaa ccgcctttct cggtgtctgg ctggttttgg
    14881 cgagtgataa caccgcacgt tcgggcaaac gcctgcttcc aattatcctg attgccgccc
    14941 tgcttgccgc aggctacacc gcccgacaaa ccgacttcac ccgccccgac ggcagccgca
    15001 gcaccgtcgc cctgcttcaa ggcaacatcg accaaaccct caaatggcgt gaagaccaag
    15061 tcatcccgac catacagaaa tattacgaac aggtcggcaa aaccactgcc gacatcgtca
    15121 tcctgcccga aaccgccatc cccgttatgc gccaaaacct gccggaaaac atactggcaa
    15181 aatttgccga acaggcgcaa aacaacggca gcgcgctcgc cgtcggcatc agccaataca
    15241 cttcggacgg caacggttac gaaaacgccg tcatcaacct gaccggttat caggaaaaca
    15301 atcaggacgg catcccctac tacgccaaaa accacctcgt ccccttcggc gaatacaaac
    15361 cgctgccctt cctgaccacg ccgctttaca aaatgatgaa tatgcccctt tccgacttcc
    15421 gcaaaggcgg cggtaagcaa tccgccctgc tgatgaaaaa ccaaaaaatc gccttcaaca
    15481 tctgttacga agacggattc ggcgacgaac tgattgccgc cgccaaagat gccaccctgc
    15541 ttgccaatgc cagcaatatg gcgtggtacg gaaaatccaa cgccatgtac cagcacctcc
    15601 aacaatcgca ggcgcgggct atggaactcg gacgctatat ggtccgtgcc accaacaccg
    15661 gcgcaaccgc catcatctcc cccaaaggca acatcatcgc ccaagcccaa cccgatacgg
    15721 aaaccgtatt ggaaggacac atcaaaggct atgtcggcga aacgccctat atgaaaaccg
    15781 gcagttcatg gtggttgatg ggcatattga ccctagccgc actgattctt ttcatcttcc
    15841 gaaacaaaga acactgatac ctgcacagcc cgtccggacg ggctgtcttt tttcaaaacg
    15901 gctatttaca tacaattacg tatgtaatat aattctgaaa tcgaattgag ccatcaggtt
    15961 tacaaaatca atcaaacctg ccttacaaaa ttttcctgtc tttcaaacct tagcgcatat
    16021 ctcctgccaa acatacaaaa tacaagccaa gcagtgatat actgcatccc aacacagcaa
    16081 accgccgata cgcagtttca gccgaaagga aatgccccaa atgaataacg ctttcgcatt
    16141 acccgccatc caaagcggca acggcagcct cgaacaatac atccacaccg tcaacagcat
    16201 cccgatgctg tcccaagaag aagaaacccg cctcgccgaa cgccggataa agggcgacct
    16261 caacgccgcc aaacaactca tcctgtccca cctgcgcgtc gtcgtttcca tcgcgcgcgg
    16321 ctatgacggc tacgggctga atcaggcaga cctgattcag gaaggcaata tcggactgat
    16381 gaaggcggtc aaacgctacg agccaggtcg aggcgcgcgt ctgttttcat ttgccgtaca
    16441 ctggattaaa gccgaaatcc acgagtttat tttgagaaac tggcgtttgg ttcgcgttgc
    16501 caccaccaaa ccgcaacgca agctgttttt caatttacgc agtatgcgta aaaacctcaa
    16561 cgccctgtct cccaaagagg cacaagacat cgccgacgat ttgggtgtca aactttccga
    16621 agttctggaa atggaacagc gcatgacggg acacgacatc gccatcatgg cagacaacag
    16681 cgacgacgag gacagtttcg cccccatcga ctggcttgcc gaccacgatt ccgaaccgag
    16741 ccgacaacta tcgaaacagg cgcattacgc cctgcaaaca gaaggtttac aaaacgcttt
    16801 ggcgcaactg gatgacagga gccgccgtat tgtggaaagc cgctggcttc aagatgacgg
    16861 cggtctgacg ctgcaccagc ttgctgcaga atacggcgtc tctgccgagc gcatccgcca
    16921 gattgaagcg aaagccatgc agaaactgcg tggtttcctg accgaagaag ccgaagcggt
    16981 ttgaaatata cgcaataaaa tacccgacaa attgttttgt cgggtatttt atttggtaaa
    17041 catcaatgcg gtttgtgcgt cgtgccgtac acgattttat ccgtccaagc catcgcaatc
    17101 gccgaaatca aaaagcagac atgcaccaga cactgccgca tcagctgctt ttccgacaga
    17161 ttggcgaaat tgatatagtg gattaacaaa aatcaggaca aggcggcgaa gccgcagaca
    17221 gtacaaatcg tacggaaccg attcgcttgg tgcttcagca ccttagagaa tcgttctctt
    17281 tgagctaagg cgaggcaacg ccgtactggt tttggttaat ccactataca tttcccttcc
    17341 ttgcagcaac aaaagcgcgt gattccaatc tgccgctgca aaatcttcaa tttttcacac
    17401 ccgaaaacgc ttgccgccat acagatgtga tatattgatt ccattttaac gggcttcgga
    17461 gaacgacatg agcagcggaa atatccacat ccacagcatg accggatttg ccaacgcggc
    17521 ggcagagtgc ggcagcaaac gcatcaatct cgacatccgc gccgtcaacc accgcttttt
    17581 ggacattcaa atcaggatgc cggatgattt gcgctatttg gaaagcggta tccgcgagaa
    17641 aatttcatcc catatcgcgc gcggcaaagt cgaatgcaaa atccaaattc aagatacgga
    17701 aaacagcaga cagtccttgg aactcaactc ggatttggtg aaccagcttg ccgaaatcaa
    17761 caaaaacctc cgcaagcatc acgatttggc aaaactgggc gttgccgaca tcctgcgttt
    17821 ccccggcgta ttggcaagcc aaagggaaaa tacggaggaa ttggcaaaaa gcattaccga
    17881 actgaccgaa aaagcgttaa aagactttac tgccgcacgc cggcgcgaag ggaaaaaatt
    17941 gggcgagcac ctgttacaac gcctcgaaag catggaagaa atcatagatg cattgagcga
    18001 actctttcct accctgctgg aaacacataa agaaaaaatc cgcgcccgcc tcgtcgaagc
    18061 agtcggcgac atcaataatg acaggctgca acaggaattt gccctcttta ttcaaaaatc
    18121 cgacatcgac gaagaattca gccgcctgcg cacgcatatc gacgaagtac gccgcatcgt
    18181 taccgaacac aaaggcagca gcggaaaacg cttggatttc ctgatgcagg aattaaaccg
    18241 cgaagccaac actttgggca gcaaatccat tgccgccgaa tgcacccaag cctcggtcga
    18301 actgaaagtc ttaatcgagc agatgcggga acaagtgcag aatatcgaat aatcggtttc
    18361 cccgataacc aaatgccgtc tgaaagccct ttcagacggc attttttcag gttgaaacct
    18421 ttgcggtata aaggcttaag gctttccttt gaccgccacc aatcttgttc ctgcaagaaa
    18481 atcatacaga aactgccgat cgggattcag cagggcaaac ccccacggta aaatcagcca
    18541 aatcaatgcc gcaccgaatg catccttggg tgaaataccg agcaggtggc gtaatccggc
    18601 ataggctaac ataggaatga agacgatgaa tatgcacgcc caaataaagc gcaggcgcag
    18661 caggtacaaa gacggctgta tgccgttaag gtcgcacaag ccgattttcc atgtcctcat
    18721 cgccaaggtc tgcccctgac cgtgccagtt ggcgcgaaaa taaagccacc atgatcccat
    18781 tatcaggata cttgttacca atgcagaaac cgcgatagaa acgggattca gaaaaatggc
    18841 ggcaataccg gcaaacaatg ctgccaaaca ggttgccgca ccgaccagca gcatttcgta
    18901 cagcatggcg gcaaagcggc gtttgagcgg ggcggttttc agtgtcatca tcttttcaat
    18961 cagaatatgc cgtctgaaac gccaacaggc ttcagacggc atttatgcaa agatgccttg
    19021 cggcggttaa cggtgcggac gtttctgacc gcgcgactgt tttgccgcca tttgattgat
    19081 ttcctgacgt gtcgggcgtt ttttgaacat agcgtgcgcc tcgtccaccg aacatttttg
    19141 cgacaggcag atcagggtaa tcgcatcttt ctggtgttgt ccgccgctgt ggtacatacg
    19201 gcgcaggttt gcctcgttga ttctgccttt ttcgggatcg atgtcgaatt ttttcaggcg
    19261 ttcgataaac tggcgttgct gtcggcggga tgtccaaaca aaaccgcccg cagcggcggc
    19321 gacgatgacg gcggcaagca ggatggcaag cggccaggag tcgacaatca atacgataat
    19381 gaggcttaaa acggcggtgg tcagtaaaat caggccgccc aagcgcagtt tggtcttatt
    19441 gtccataggg ttaatgttcc tttattgagg tggtcgtgcc gtctgaaatg ttttcggacg
    19501 gattggtgaa tacttttcag gattaacggt attttacagt attttcggat tttggggatt
    19561 accgctttat tccgccagcg acacgacaag ccgtttgaat accgtccatg cgtcgccctc
    19621 ttccgcgcct ttgatgattc ggtcgatttg ggcacaggtt ttgagcgcgt caagcaggcg
    19681 gacgacggaa atccgcttga ctgcaagcgg tgcgagcgtc tgcttgtcgc cccaaagcct
    19741 gaggccgttg cggacggatt ggatgctctg cccctgcttc aaggcggcgg caagccggat
    19801 cagcgtccgc acgtcttcgg caaccgccca cagaagcagc accggttctt cgccttcctc
    19861 ctgcaatccg tccaaaagcc tgcatacgcg cgggacatcg cccttcatcc atgcgccggc
    19921 aagctgaaaa acgtcaaagc gggcaacatt ggcaacggcg gtttgcgcct catcgatatt
    19981 gacggtatgc cctttcggat acagcagcgc gagcttgtcg atttcctgac gcgccgccaa
    20041 caaattgcct tccacgcgct cggcaaacag tgccaatgcg tctgcctcga tacccaaacc
    20101 gattttgtcc agccgtccgc gtatccattg gggcaaggcc gccgcgccga ccggtttggc
    20161 ttcccacact tccccctttg ccgccaatgc ggcaaaccat ttggactgga gctgggtttt
    20221 ctccagtttg ggcagcaaaa ccagcgttac cgtatcttcc ggcaggcggg cggcaaaatc
    20281 ctgcaacgcc tcgccgccgg ttttgccggg ttttccgttg gggatatgca gttccaacag
    20341 cttcaaatcg gcaaacagac ccgcactgcc tgcggtttgc aacagttcgt tccaatcgaa
    20401 ggcattgtct gccgtataaa cttcccgatt aaggtaacct tgtttcttcg ccgccgccct
    20461 caatgcgtcc aatgcctcga tacgcaacag ttcttcctcg ccgtggatga cgtacagggg
    20521 tttcaaaggc gcgtccgtat caatgtgtcc gatatgtgcc gccacgtcat tccgccttca
    20581 gaaaggtcag gcggcggaca atctgttcgg cggcatcctg ccgcatttcc gcccacaatg
    20641 ccgcttcctc ttcctgtttg cccaagatct cgttgtcggc ataagcaagg acgcggcgga
    20701 cggacacggt catcggtttg ccgaccggct cgccgcgttt caatacctgc gcttcaaccg
    20761 tcaagattaa aagatattcg ttgataactg ccgcacgggt aacggtgtag gtttccttgt
    20821 tttgggaaac gctgtctata cgcagggtca tctgcgcgcc ggcagcatcg tccaccctgc
    20881 ccgaagcctg atacagcgcg gtttccaaag gaaactgcaa tgcctgtccg ccttcgatgt
    20941 gccagctccg gtaggtcagc ggcggagaaa tgccgtctgc acctttcagg tggaaaccgc
    21001 acgcgcccag catcagcact gcggcagtaa gaaacagttt gttcatggct tgcctttctc
    21061 aaaagcacaa agtcggtaga ttatatcagc ggcgtgttca gacggcattg ccgtccagcc
    21121 aaatcaggct cgccatacgc cctgtcgctc cgtcgcggcg gtaggaaaag aaagtgtccc
    21181 gttccaaaac cgtacaatgc gtgccgccat atacgccgcc cacgccttca cgcttcagaa
    21241 tcaggcgggc gagcgcgtaa aggtcggcaa ggaatttgcc gccgcctatg ccttcaaatg
    21301 cggcggcggc ttcgggcatg ggcgtgcaga acgcatcaaa cacatcctgt ccgacttcaa
    21361 acgcatccgc actgatggcg gggccgagat acgccatcat ttcgacaggc ggaaccttca
    21421 tcgcagcaat ggtgttttgc aatacgccgc ccgccaaacc gcgccagccc gcgtgtgcgg
    21481 cggcaaccgc cgtacccgcc ctgtcgcaaa atagaacggg cagacagtct gcggtcatca
    21541 cggcacaggc ggccttgccc gtgtcgtcca cggaagcgtc ggcatcgggc gtgccgccta
    21601 acgcttcggc agcgttgacg acgatggtgc tgtggatttg attgaggtag gcaacgggca
    21661 atccgacctg ctgttgcacg atttcgcggt tacggcgcac ggcttcaggg tcgtcgccga
    21721 cgtgcgtacc gaggttcaaa ctctgatacg caccttggct cacgccgccg ttgcgcgtgg
    21781 taatcagggt tttcacattg gcgggcgcgg gccaatcggc ggtcaggaag tttttgcctt
    21841 tcggggcgag atttagggtt tctgtgatgg ttttcattgg atattggaat aggtgtgtgg
    21901 cggaaagggt tgattaactg ccttcggggc aaatggatgt ttgttttttc gtcattcccg
    21961 cacaggcggg aattcggaga ttcgggattg ttttcaattg ttcaaacgtt cggattcgga
    22021 ttcttgcagg tgcgggaatg atgcccttat atatagtgga ttaaatttaa atcaggacaa
    22081 ggcgacgaag ccgcagacag tacaaatagt acggcaaggc gaggcaacgc cgtactggtt
    22141 taaatttaat ccactatact ttctccgagc tttatatgtt tcaacagagg acggcacatc
    22201 aagcaccgca ctgcgtgttg cccgaacgag actaccctcc gattagattc tatcgctata
    22261 aacagatggg tttcaaccga aaaggaatgg ggataaagtc catttccgac acctctcggg
    22321 cgatgccgtc tgaaaaccaa tctccacttt cagacggcat tgtttaggca cggtcatttt
    22381 gcaaattaag gttaaggcgt gtatgcttgc cttcccttaa aaacaaacac gcaacgcatt
    22441 attatgaata tcctcagtaa aatcagcagc tttatcggaa aaacattttc cctctgggcc
    22501 gcgctctttg ccgccgccgc ttttttcgcg cccgacacct tcaaatgggc ggggccttat
    22561 attccttggc tgttgggcat tattatgttc ggtatgggtt tgacgctcaa accttccgac
    22621 ttcgatattt tgttcaaaca tcccaaagcc gtcatcatcg gcgtaatcgc acaattcgcc
    22681 attatgccgg caaccgcctg gctgctgtcc aaactgttga acctgcctgc cgaaatcgcg
    22741 gtcggcgtga ttttggtcgg ctgctgcccg ggcggtacgg cttccaatgt gatggcctat
    22801 ctggcgcgcg gcaatgtggc tttgtcggtt gccgttacgt ctgtttccac cctgatttcc
    22861 ccattgctga ctcccgccat cttcctgatg cttgccggtg aaatgctgga aatccaagcg
    22921 gccggtatgt tgatgtccat cgtcaaaatg gttttgctcc ccattgtttt gggtttgatt
    22981 gtccataagg ttttgggcag taaaaccgaa aagctgaccg atgcgctgcc gctggtttcc
    23041 gttgccgcca tcgtgctgat tatcggcgcg gttgttgggg caagcaaagg caagattatg
    23101 gaaagcggcc tgctgatttt tgcggttgtc gtactccaca acggcatcgg ctacctgctc
    23161 ggcttctttg ccgccaaatg gaccggcctg ccttatgatg cacaaaaaac gctggccatc
    23221 gaagtcggta tgcaaaactc gggcctggcc gccgcgcttg ccgccgcaca ctttgccgct
    23281 gcgccggtcg ttgccgttcc gggcgcattg ttcagcgtgt ggcacaatat ctccggctcg
    23341 ctgctggcaa cttattgggc ggccaaagcc ggtaaacata aaaaacccta aacgcctttc
    23401 atcataatgc cgtctgaacg gggcaaacga aaccggcggt ttccgcccga ccccttcaga
    23461 cggcctttgt ttgaaatcgg cagggacgat tgtccggctg ctccgattcg gctgcctgcg
    23521 ttcgccccgc ctttcaagcc gcctcactcc cttacataaa ccacttcgac atcgtagtcg
    23581 tcttcgttcc aatcgtcatc gtcgtccgcg ccgaatttgt cctgccattc ctcttcattg
    23641 ctcaaagacg aatccaaacc ggcttcaaga cggaggacag acaacaaatg atatatgtcg
    23701 tccggaatcg gtgcttcaaa cgaaacggtt tcgccggttt tcggatgagt gaaacttaag
    23761 cggtaggcgt gcaatgcctg acgcgcaccc aaacttttaa cggcttcttt caccgtgtcg
    23821 ccgcacggat ggcgcgggtt gccgtaaacc gggtcggcgg caagcggatg gttggcctca
    23881 cgcatatgga cgcggatttg gtgcgtcctg cctgtttcga gcgagcattc gatatagctg
    23941 tgcgccagat agcgttccaa cactttgacg tgggtaacgg ctggtttgcc gccgaatttg
    24001 acgactgcca ttttcaggcg gttgtgcgga tcgcgtccga tttgggtttc gattttaccg
    24061 tcaaagggaa cgatgccgtt ggcgacggcg cggtaaatgc gtttgaccgt gcgctcttga
    24121 agctgttgca cgagggaatt ttgcgccggc agggttttgg caaccaccat cagcccgctg
    24181 gtttctttgt ccaaacggtg tacgatgcct gcacgaggta cttggctcaa ttcgggacag
    24241 tgcgccaaga ggccgttgag cagcgttccc gtccagttgc cggccgccgg atgcaccacc
    24301 agtccggccg gtttgttgac gacgatgacg gtatcgtctt cgtaaacaat atccaaagcc
    24361 ataggctctg gaacaaacgc cagattttcc tcactcggac ggacggttac acaaatttgc
    24421 tcgccgccta tcattttgtc tttgggttgc gaaggtttat cgtttacaat aaccgcgcct
    24481 tctttaatcc atgatgtcag gcggctgcgc gagtagtcgg gcagaagttt cgccaacacc
    24541 gcatccaacc gcccgccggc aagctcgagc ggaacggtca gaccgatacg gttttcagtt
    24601 ccggaagctg acgcaaagtc tgaatcgtcg ctataatcgg attcattatc aaaggaagta
    24661 ttctgcatga aaaaaattct tttaacggtt tcattaggtt tggcactgag tgcctgtgcc
    24721 actcaaggta cggtcgataa agatgcccag attacccaag attggagtgt ggagaagctc
    24781 tatgccgaag cccaggacga attgaacagc agcaattata cgcgggctgt caagttatac
    24841 gaaatcttgg aatcgcgctt ccccaccagc cgccatgccc ggcagtcgca actggatacc
    24901 gcatacgcct attataaaga cgatgaaaaa gacaaagctc tggcggcaat cgaacgcttc
    24961 cgccgccttc acccgcaaca cccgaatatg gattacgcgc tgtatctgcg cggcttggtg
    25021 ctgttcaacg aagaccagtc cttcttgaac aaactggcct cgcaagactg gtccgaccgc
    25081 gacccgaaag ccaaccgcga agcgtaccag gcgtttgcgg aactcgtcca acgcttcccc
    25141 aacagcaaat acgccgccga tgcgaccgca cgcatggtca aactggtcga tgcactgggc
    25201 ggcaatgaaa tgtcggtggc gcgctactac atgaaacgcg gtgcatacat cgccgccgcc
    25261 aaccgcgccc aaaaaatcat cggcagctac cagaatacgc gttatgtcga agaatcgctc
    25321 gccatattgg aacttgccta ccaaaaactc ggcaaaccac agcttgccgc cgatacgcgc
    25381 cgcgtgttgg aaaccaactt cccgaaaagc ccgtttttga cgcacgcttg gcagcccgac
    25441 gatatgccct ggtggcgtta ctggcattaa gcccatcttc gtaatgccgt ctgaagccgt
    25501 ttcagacggc attttatgtt tcaaacctca ttcaaacggt tttttctgcc aatagaattt
    25561 ataccctctc aaacgttgag ccttcacgcc gccgcgcccc aagccgaatt gcagcgcgcc
    25621 tgacaaatcg gtacgcagca gtttgatgcc gtgtgcgcgg acacggttct gcaccgcttc
    25681 ggtcggatgt ttgtaggcgt tggcataacc gcttgaagca acagcatatt cgggcgagac
    25741 ggcattgagg aacacgcccg acgaggacgt attgctgccg tgatgtccca acaccaaaac
    25801 ctggctgtac aggttgcctc catacttgcc gaccaggctt tcctcaccct tcgtatccaa
    25861 atcgcccgtt accagcagtg ccgcaccgcc cgccacaaca cgcaaaacac aacttttccc
    25921 attatcatcg atgtttttgc gttcagacgg catcaaaaac tcgaaatcca cgccgtccca
    25981 ttgccaacgc tgttccgcac aatgccgcgc cccctcataa aattccggct gtccggcata
    26041 aatcccgccg ttcggtatct tgccgactgc ctgaaaaccg ccgtcgtggt cgctgtcgtg
    26101 atgcgacaaa accaaataat ccaaatacct gattcccgac gcattcaggc tcggcacaat
    26161 ccccgtctgc gccgccgctg ccgttccggt gtcaaacaaa agatgatgat ttgccgtctg
    26221 aaccgacacc gacaaaccct gccccgcatc ccaaaccgta accgcaacct cattttccgg
    26281 cacgccgggt gaacggtaaa acacaaaccc tgccaacagc aacaccgccc acggacgcaa
    26341 acccaagccg cgcggcagca gcaacagcaa agcggcacac accgccaaca ccaacagcgg
    26401 caaaggtgcg gaggcaacgg caaactcggg cgacacatcg gcaagccaca ccaaaaaccg
    26461 caaagtgtat tccgccaaaa acgcccccgc ctgctgaagc ggcgcaaacg gaaaaaccga
    26521 acccagcaac gccagcggcg tcaataccca agaaaaccac ggaattgcca ccgcattgac
    26581 caaagggctg attaaaggca gcgaagcaaa cagataaccg agcaaaacca gcgacaacac
    26641 cgaagccgcc cactgcccgc gcaaagcagt ttgccgtttt ccctcgtgca aacgccccga
    26701 gcacgcccat atcagggccg ccaccaaacc gaaagacagc caagtcccca cacccaagac
    26761 cgccgacggg tcgaacagca gcaccgccgc caacgcctgc caccacgtcg cccacgccga
    26821 caatcttccc ctgcgccaag cccacgcaaa cgccgccaac atcaaaacgc tgcgctgcgt
    26881 cggcacggaa aaaccggcaa gcagcgcgta aaacagcgcg cctgcacacc ccgccgccaa
    26941 aacccacgcg cgcggccggg caggaaggcg cggggaacag gcaagcagcc gcttcgccag
    27001 ccacgcaaac attaccgcca ccatcgtaac gtgcaaaccc gaaatactga ccaaatgcgt
    27061 cagccccaac ggccggaacg cctgccacaa ttcggggcgc aatgccgact gttcgcccac
    27121 gctcaacgcg cgcatcagcc cgatgccgtc tgaaagcccg ccgtccgcat ccgcctgctg
    27181 ccaattacgg ctgatgcggc tgcgccaaac cgcaatcccc caaccgcttc cgccatgcag
    27241 caaaaccctg tccgcaccga ccgtccccgc accgcctatt ccgttggata atgcccacgc
    27301 ctcacggttc aaaccgcgca ggttcaactc cccgacgaca gggtgcacac gtgccgttat
    27361 ccgccatctg ctcccgaccg cccattcgcg ccgtttgtag tccgacagca acaaatcaaa
    27421 cgtccgacca ccgctgtcca cagcctttgc cgcaaactgc acacgccgcc cgtccgacct
    27481 cggcatatcc gccacttcca ccgtcaacgg cacacctgaa accgcctccg cccgccattg
    27541 cgaagacagt gccgcttccg ttctgaatac gccgtaagcc gcgcccgcca acacgcacag
    27601 catcagaccg gcaaacgcaa aacgccttgc aaacacagca aaaaccgcaa aagccgccag
    27661 ccaaaacagc caatgcggca cgaccggcag cgcaaacgaa gccgccgcgc cgacaaccca
    27721 acacggcaaa aaccaacgac ggaacacgtc tccccacccc agatatttca aaaataaacg
    27781 gataataaag caaatccgaa aaaccgtcat aacaagattt gaaaatgata tagtggttta
    27841 aatttaaatc aggacaaggc gacgaagccg cagacagtac aagcagtacg acaaggcgag
    27901 gcaacgctgt actggttttt gttaaaccac tataagaatg caaacgaaaa gcctcagtat
    27961 tatccgagac aacggcaaac tttccatcgt cattcccacg aacccacatc ccgttattac
    28021 cacgaaagcg ggaatctagg actcagggtt aagaaaacct acatcccgtc attccctcaa
    28081 aaacagaaaa ccaaaatcag aaacctaa
//
LOCUS       DBBZYD010000016        27879 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.016, whole genome shotgun sequence.
ACCESSION   DBBZYD010000016 DBBZYD010000000
VERSION     DBBZYD010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27879
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.016"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            82..891
                     /gene="aroE"
                     /locus_tag="ACJJDL_000563"
     CDS             82..891
                     /gene="aroE"
                     /locus_tag="ACJJDL_000563"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HGG7573332.1"
                     /translation="MHALPRYAVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIPLKNGKLRGD
                     NTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            893..1594
                     /gene="mtgA"
                     /locus_tag="ACJJDL_000564"
     CDS             893..1594
                     /gene="mtgA"
                     /locus_tag="ACJJDL_000564"
                     /EC_number="2.4.99.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HGG7573333.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDAHFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(1797..1872)
                     /locus_tag="ACJJDL_000565"
     tRNA            complement(1797..1872)
                     /locus_tag="ACJJDL_000565"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1837..1839),aa:Phe,seq:gaa)
     gene            complement(2063..2797)
                     /gene="lptB"
                     /locus_tag="ACJJDL_000566"
     CDS             complement(2063..2797)
                     /gene="lptB"
                     /locus_tag="ACJJDL_000566"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HGG7573334.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(2871..3401)
                     /gene="lptA"
                     /locus_tag="ACJJDL_000567"
     CDS             complement(2871..3401)
                     /gene="lptA"
                     /locus_tag="ACJJDL_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HGG7573335.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(3382..3963)
                     /gene="lptC"
                     /locus_tag="ACJJDL_000568"
     CDS             complement(3382..3963)
                     /gene="lptC"
                     /locus_tag="ACJJDL_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HGG7573336.1"
                     /translation="MKIRWRYGIAFPLILAVALGGLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(3960..4496)
                     /locus_tag="ACJJDL_000569"
     CDS             complement(3960..4496)
                     /locus_tag="ACJJDL_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HGG7573337.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(4561..5535)
                     /locus_tag="ACJJDL_000570"
     CDS             complement(4561..5535)
                     /locus_tag="ACJJDL_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HGG7573338.1"
                     /translation="MAENGKYLDWAREVLHTEEEGLREIATELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            5632..6687
                     /gene="tal"
                     /locus_tag="ACJJDL_000571"
     CDS             5632..6687
                     /gene="tal"
                     /locus_tag="ACJJDL_000571"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HGG7573339.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKQQDLTPKQRYETMAVADVQAACDVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDSALDTTLPDRLK
                     GKIAIALAKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLATRLQED
                     GLKQFEEAFEKLLAPLV"
     gene            6702..6836
                     /locus_tag="ACJJDL_000572"
     CDS             6702..6836
                     /locus_tag="ACJJDL_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573340.1"
                     /translation="MPSERLSDGIALLTGHSAAYQGFALKILMGKKLMHDITRQHKRK
                     "
     gene            6841..7131
                     /locus_tag="ACJJDL_000573"
     CDS             6841..7131
                     /locus_tag="ACJJDL_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573341.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            7148..8035
                     /gene="gluQRS"
                     /locus_tag="ACJJDL_000574"
     CDS             7148..8035
                     /gene="gluQRS"
                     /locus_tag="ACJJDL_000574"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HGG7573342.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARAHGGRWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWYGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQAAAVHGADGFVYNGRCRNPQQRPALQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLNLPEAPEADRPAELLD
                     WAVAHWDMDKVPKHAITTP"
     gene            complement(8105..9115)
                     /gene="dusA"
                     /locus_tag="ACJJDL_000575"
     CDS             complement(8105..9115)
                     /gene="dusA"
                     /locus_tag="ACJJDL_000575"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HGG7573343.1"
                     /translation="MNDNTHTLPPRRLSVAPMLDWTDRHYRYMARQITRNAWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTANPIGYADLVQRLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(9146..9637)
                     /gene="dtd"
                     /locus_tag="ACJJDL_000576"
     CDS             complement(9146..9637)
                     /gene="dtd"
                     /locus_tag="ACJJDL_000576"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HGG7573344.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDTEK
                     DAHYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(9711..10469)
                     /locus_tag="ACJJDL_000577"
     CDS             complement(9711..10469)
                     /locus_tag="ACJJDL_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7573345.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            complement(10540..11406)
                     /locus_tag="ACJJDL_000578"
     CDS             complement(10540..11406)
                     /locus_tag="ACJJDL_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7573346.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(11455..11733)
                     /locus_tag="ACJJDL_000579"
     CDS             complement(11455..11733)
                     /locus_tag="ACJJDL_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HGG7573347.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(11733..12023)
                     /locus_tag="ACJJDL_000580"
     CDS             complement(11733..12023)
                     /locus_tag="ACJJDL_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HGG7573348.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(12026..12556)
                     /locus_tag="ACJJDL_000581"
     CDS             complement(12026..12556)
                     /locus_tag="ACJJDL_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HGG7573349.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVIFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            12864..15389
                     /gene="tspA"
                     /locus_tag="ACJJDL_000582"
     CDS             12864..15389
                     /gene="tspA"
                     /locus_tag="ACJJDL_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HGG7573350.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPAVEENVTETV
                     AETPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVA
                     ETPDFNATADDLSALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENATEITLE
                     TPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTGFPSESVGSDAPSEAKY
                     DLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(15562..15978)
                     /gene="gloA"
                     /locus_tag="ACJJDL_000583"
     CDS             complement(15562..15978)
                     /gene="gloA"
                     /locus_tag="ACJJDL_000583"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HGG7573351.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(16003..17172)
                     /gene="lapB"
                     /locus_tag="ACJJDL_000584"
     CDS             complement(16003..17172)
                     /gene="lapB"
                     /locus_tag="ACJJDL_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HGG7573352.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(17183..17497)
                     /locus_tag="ACJJDL_000585"
     CDS             complement(17183..17497)
                     /locus_tag="ACJJDL_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HGG7573353.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKVDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            17807..18805
                     /gene="ilvE"
                     /locus_tag="ACJJDL_000586"
     CDS             17807..18805
                     /gene="ilvE"
                     /locus_tag="ACJJDL_000586"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HGG7573354.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYSSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALIE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(18990..19775)
                     /gene="fabI"
                     /locus_tag="ACJJDL_000587"
     CDS             complement(18990..19775)
                     /gene="fabI"
                     /locus_tag="ACJJDL_000587"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HGG7573355.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELGSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(19930..20751)
                     /gene="dapD"
                     /locus_tag="ACJJDL_000588"
     CDS             complement(19930..20751)
                     /gene="dapD"
                     /locus_tag="ACJJDL_000588"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HGG7573356.1"
                     /translation="MSLQNIIETAFENRADINPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEILNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQASPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(20918..22561)
                     /gene="pgi"
                     /locus_tag="ACJJDL_000589"
     CDS             complement(20918..22561)
                     /gene="pgi"
                     /locus_tag="ACJJDL_000589"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG7573357.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALEFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHITVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            23071..24303
                     /gene="pilG"
                     /locus_tag="ACJJDL_000590"
     CDS             23071..24303
                     /gene="pilG"
                     /locus_tag="ACJJDL_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HGG7573358.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            24377..25237
                     /locus_tag="ACJJDL_000591"
     CDS             24377..25237
                     /locus_tag="ACJJDL_000591"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HGG7573359.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            25239..25871
                     /gene="coaE"
                     /locus_tag="ACJJDL_000592"
     CDS             25239..25871
                     /gene="coaE"
                     /locus_tag="ACJJDL_000592"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HGG7573360.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHND"
     gene            25864..26073
                     /locus_tag="ACJJDL_000593"
     CDS             25864..26073
                     /locus_tag="ACJJDL_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HGG7573361.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDMAYR"
     gene            complement(26158..27834)
                     /gene="pilB"
                     /locus_tag="ACJJDL_000594"
     CDS             complement(26158..27834)
                     /gene="pilB"
                     /locus_tag="ACJJDL_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HGG7573362.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYKESQAGKEVLPILFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         6486 a         7902 c         7156 g         6335 t
ORIGIN      
        1 ctgaaaacag tttagacggc atcgttccca tcttcgcgcc gccgttataa aatgaccgcc
       61 ccgccttgat ggaatatgac tatgcacgcc ctcccccgct acgccgtttt tggcaacccc
      121 gtcgcccaca gcaagtcgcc gcagattcat caacaatttg cccttcagga aggcgttgac
      181 attgaatacg aacgcatttg cgccgacatc ggcggttttg cacaggcggt ttcgacattt
      241 tttgaaacag gcggttgcgg ggcaaacgtt accgtaccgt tcaaacagga agcgtttcat
      301 ctggcggacg agcattccga acgcgcattg gcggcaggtg cggtcaatac gctgattccg
      361 ttgaaaaacg gcaagctgcg tggcgacaac accgacggta tcggtttgac caacgacatc
      421 acgcaggtca aaaatattgc catcgagggc aaaaccattt tgcttttggg cgcaggcggc
      481 gcggtgcgcg gcgtgattcc ggttttgaaa gaacaccgcc ctgcccgtat cgtcattgcc
      541 aaccgtaccc gcgccaaagc cgaggaattg gcgcagcttt tcggcattga agccgtcccg
      601 atggcggatg tgaacggcgg ttttgatatc atcatcaacg gcacgtccgg cggtctaaac
      661 ggtcagattc ccgatattcc gcccgatatt tttcaaaact gcgcgcttgc ctacgatatg
      721 gtgtacggct gcgcggcaaa accgttttta gattttgcac gacaatcggg tgcgaaaaaa
      781 actgccgacg gactgggtat gctagtcggt caagcggcgg cttcctacgc cctctggcgc
      841 ggatttacgc ccgatatccg ccccgttatc gaatacatga aagccatgta atatgttccg
      901 catcgtcaaa tggctgattg ccctgcccgt cggcatcttt atctttttca atgcctatgt
      961 gtacggcaac atcattacct accgcgccgt cgcgccccat cggactgcct ttatgtcgat
     1021 gcggatgaag cagtttgaac aggaaggtcg cgatgtcgca ctggattacc gctgggtgcc
     1081 ctacaaccgc atctcggtca acctgaaaaa agccctgatt gcttccgaag atgcccattt
     1141 tgccgggcac ggcggcttcg attggggcgg cattcaaaac gccatcaggc gcaaccggaa
     1201 cagcggcaaa gtgaaggcgg gcggctcgac catcagccag cagcttgcca aaaacctgtt
     1261 tttaaacgaa agccgcagct atatccgcaa aggcgaagaa gcggcgatta ccgcgatgat
     1321 ggaagccgtt accgacaaag acaggatttt tgaactgtat ttaaactcaa tcgaatggca
     1381 ctacggcgtt ttcggcgcgg aagccgcgtc ccggtatttt tatcaaatac ccgccgccaa
     1441 gctgaccaaa cagcaggcgg cgaaactgac tgcccgcgtc cccgccccgc tctactacgc
     1501 cgaccatccg aaaagcaaac ggctccgcaa caaaaccaat atcgtgctca gacgcatggg
     1561 ttcggcagag ttgcctgaaa gcgacacgga ctgagtgccg ccgcaatata aaatgccgtc
     1621 tgaaatatca ttcagacggc atatgctttc tgcctttacc cttttctcta aaacgcaacg
     1681 gggcggtcat tatcgctttt gtccttctac ataacggtca gacacaaaac gtgtccgaca
     1741 cggacaactt cccaaaaacg gcaggcaaaa aaaataaccg cttataagcg gttttttggt
     1801 ggccagaggc ggaatcgaac cgccgacaca cggattttca atccgttgct ctaccaactg
     1861 agctatctag cctttgtctg tctcgttaag agatgcgtat taaaccaaat tacgggacga
     1921 catgcaagca tatcgggcaa tattctttga aaacaggttt aagtcaatgt tttaaatttg
     1981 aattaattta tgtaaaaaca acataaatcc gtatttttgc cgcctgcccg acgatattag
     2041 gtcgcccgtc tgaaaaatat tttcaatatt tgaagttctt acccagataa acagaacgaa
     2101 cctgttcgtt tccgaccaaa tcatcaggtt ttcccgatgc caacaccgtg ccgtctgaaa
     2161 taatgtaggc ccgatcgcag atgctgaggg tttcgcgtac gttgtggtcg gtaattaata
     2221 cgccgatacc gcgcgacttg agaaatccga tgattttttg gatgtcgatg acggcgatgg
     2281 gatcgacgcc ggcaaaaggc tcgtccaaca aaataaaatg cggtttcatg gcaagtacgc
     2341 gggcgatttc gacgcgtcgg cgttcgccgc ccgacaaaga tggggcagga ttattgcgca
     2401 aacgctcgat attcaggtcg gcaagcagtt tttcaacttc gccgtcgatg cggcttttgt
     2461 ctttggtact gatttctaaa atggcgcgga tgttttgttc gacggtcatt ttacggaaaa
     2521 tagaggcttc ctgcggtagg tagccgacac ccaggcgggc gcgttcgtgt atgggcaggt
     2581 gacgcaattc ctgcccgtcc agcatcacgc tgcccgcatc ggcggcaatg agtccaacaa
     2641 tcatgtagaa gctggtggtt ttacccgcac cgttgggccc gagcaggccg acgacttccc
     2701 cgctttcgat ttcaagggag aagcttttaa cgacttggcg ttttttgaaa cttttttgca
     2761 ggttttgaac aacaaggcgg ctgacgtttg cgctcataaa tatctcttca atatcttcgg
     2821 tcggcaaatg ccgtccgaac caggtttatg tttcagacgg cattttggga ttattcggat
     2881 ttttgcgtac tcgaaggctg gataacgacg ctgaccctgc cggatttgga agcggatttt
     2941 gcgccggatt ttgtgctgcc gctgatggta tagacttcgg ttttggtgtt gtatgtaatc
     3001 accgcacctt cggcgacatc gccgccgcgc tgtactttgg cattaccggt taagactacg
     3061 gtgctgcctg cagatgaata agcaacgttg tttgcctgtc cgcgcaccgt gcctttgccg
     3121 ccgtccaatg tctggctgaa gcggactggc gaaccttccg ccctcacgga ttcgccgcct
     3181 ttgccgccgc gtgtaacatt gacgcgggcg gcggaaatat tgagcgtacc ctgtctgatg
     3241 acgacgtttc cgctgaatgt ggtgctttgg ttggcttgat cgagcgaacc ttggtcggcc
     3301 tcaatctgaa taggctgcct gctgtcgctt tgaagggcaa aagcggggga cgccgaaaaa
     3361 aatgctatta aaacaaatag cttacatatc ttttgtatca taaatcgtgg ctttcacttt
     3421 agatgagaag ttcaacatgc ctgttttgtg gtcgtaagtc atgccgcccg cctgaccgtg
     3481 cgatgcacca tattggaaac tgacaggcgt atcggtttgg gcatattgag attcggtatc
     3541 gacgtgcagc ttttcggctt caactttacc cgcctgccgt ttgccgtcag cggttttggt
     3601 cagcacaacg ttgtttttaa aaagaacctg tttgttttcg gtatggtaaa cggcttcatc
     3661 gctgccgact tcgtacaaca acctgccttc ttggaagaac acgagatgcg gcgaatcaaa
     3721 atggatgtcg ctgctttcgg gaaactgttt cgcgcctttc gcgctcaaat gttcttttaa
     3781 gtatccctgt tcgtcaaacc gcctgccatc caagccgtcc attgtgtatt gcggttcgtc
     3841 gggattgagc ctgacttctt caatctcgac ttcgctgatg cgtcccaacc atgccgacag
     3901 accgcccaag gcaaccgcca atatcaatgg gaacgcaatt ccgtaccgcc atcttatttt
     3961 catttgatgt actcgttcaa agccgcgccc aaagtccctt gcgcctgcat aatcaggtcg
     4021 cacacttcgc gcaccgcgcc cgcaccgccg gggcgtttgg caatataggc ggcgtgttgc
     4081 agcgtaaacc aatgcgcgtc gggaacggca accggcaatc cgcaacgcac catcaccggc
     4141 aaatcgacca cgtcgtcgcc gacaaaggca cactcggctt cttccacgcc gacctgagcg
     4201 cgcagctctt catacgcggc gcgtttgtcc gaaatgcctt tgaagtagta atttatgccc
     4261 aactgtttga cgcggatgcc gacggagggc gcgtcccgac ctgtgataat cgcagtctgc
     4321 acgccgcttg cctgaagcat tttcagaccg tgtccgtcca gtgtgtgaaa cgatttgatt
     4381 tcttcgccgt tatcgcggat aaagatgcgc ccgtcggtca aaacgccgtc cacatccagg
     4441 atcaacagtt tgattttggc ggcgcgcgcc tgtaattcgg gagaaattgc ctgcatggga
     4501 tttccttgtt ttcagacggc atatcttacc acaaatgccg tctgaaacgg ctgcaacgcc
     4561 ttatacaatc cgtgccgcca gcaggtcgtg catattcagc gcgccgatca gcacgccatc
     4621 tgcatcggta accagaagcc cgttcacatg gtttgcctgc atgactttca gggcttcggt
     4681 ggcgagacgt tcggcggaga tggttttagg atgcgtatgc atgacttcgt ctatcgaaag
     4741 accggtaaaa ttgtcgcatt cttgaaacag gcggcgcaaa tcgccgtcgg tgaatacgcc
     4801 tttcagacgg ccttgcccgt ccgttaccgc caacatgccc agcccttttt cactcatgct
     4861 gacgatggct tctttcaagg gcgtgccgag tcggacggca ggcaggccgc cgcctttgtg
     4921 cataatgtcg gcaacgcgca aaagtaggcg tttgccgagg ctgccggcag gatggctcaa
     4981 ggcgaaatcg tcgggcgtga acgcgcgtgc gcgcagcagg acgaccgcca acgcatcgcc
     5041 caaagccatg acggcggtgg tgctggtggt cggggcaagc cccagcgggc aggcttcttt
     5101 ggaaaccgac gccgtgatgt ggatgtcggc atggcgcgcc atggttgaat cggggcgggc
     5161 ggtgatgcag acaagcgtga tgtctttgcg tttgagcgcg gggatgatgg cggcgatttc
     5221 gtcgctttcg ccggaattgg aaatcgcgac gaccacgtcg ttgtccacaa tcatgcccaa
     5281 atcgccgtgt gccgcttccg cagggtggac aaaaaacgcg ggcgtgccgg tcgaggccat
     5341 cgttgccgcc attttgcgcc cgatatgtcc cgacttgccc atgcccgtga taacgaccct
     5401 gcccttgcag tgcaacaacg cgtctgccgc aaggacgaag ttttcgtcca attccgttgc
     5461 aatttcgcgc aagccttcct cttcggtgtg caacacttcg cgcgcccagt cgagatattt
     5521 tccgttttct gccattgcca tccgcctttg ctgtaataaa actacccaaa atttccgaat
     5581 cggggtagca taagcctttg aaacatacac atccatccaa aggaatcaga aatgactatt
     5641 ttatcggacg ttaaagcatt aggacaacaa atctggctgg acaacctttc ccgctcgctc
     5701 gtgcaaagcg gcgaattggc gcaaatgttg aaacaaggcg tgtgcggcgt aacttccaat
     5761 cccgccattt tccaaaaagc cttcgccggc gatgccctgt acgccgatga agtcgccgcg
     5821 ctcaaacagc aagatctgac cccgaaacaa cgctacgaaa ccatggcggt tgccgatgtg
     5881 caagccgcct gtgacgtgtg ccttgccgaa cacgaatcca ccggcggcaa aaccggtttc
     5941 gtcagcctcg aagtttcgcc cgaattgtcc aaagacgcgc aaggcacggt agaagaagcg
     6001 cgccgcctct acgccgccat cgggtgcaaa aacgcgatga ttaaagtgcc tgccaccgac
     6061 gcaggcatcg atgcgctcga aaccctcgtt tcagacggca tcagcgtaaa cctcacgctg
     6121 ctgttctcac gcgcccaaac cctcaaagcc tacgccgcct acgcgcgcgg cattgccaaa
     6181 cgcttggcag ccggacaaag cgttgcccat atccacgtcg tcgccagctt cttcatctcg
     6241 cgtgtggaca gtgcgctgga cacaacactg cccgaccggc tcaaaggcaa aatcgccatc
     6301 gcccttgcca aagccgccta tcaagattgg gaacaatatt tcaccgcccc cgaatttgcc
     6361 gcactggaag cccaaggcgc aaaccgcgtg cagcttttat gggcatctac cggcgtgaaa
     6421 aacccagcct atcccgacac gctctacgtt gacagcctga tcggcgcgca caccgtcaac
     6481 accgttcccg atgccacgct caaagccttt atcgaccacg gcacagccaa agccacgctg
     6541 accgaaggcg tagaagaagc acaagcgcag ctcgccgaaa ccgccgcgct cggcatcgat
     6601 gtcgaaacct tggcaacgcg tttgcaggaa gacggtttga aacagtttga agaagcgttt
     6661 gaaaaactgc tcgcaccgtt ggtttaaact tttcatcccc gatgccgtct gaaaggcttt
     6721 cagacggcat cgcccttttg accggacaca gtgcggcata tcaaggattc gccctaaaaa
     6781 tattaatggg caagaagtta atgcacgaca ttacccgcca acacaaaagg aaatagaacc
     6841 atagcaaaag cactcgaaat catttcaccc aatgaaattt attcagatct gatttttaag
     6901 gatccggtac ctccccatac aatatataca gaattgatga aactggttag tagaaatgca
     6961 agtaatgaga gaatcgcaga tagagccttc gattttttct cgtccggcct tatggatggt
     7021 tcagctaccg aagagcaata taatgcccta tatgatttaa ccttacttga agaacccggg
     7081 atggaactga ataaagatga gataatggct ttgattaata gtcttaaata aaggggccgt
     7141 accggatatg tacacaggac gtttcgcccc cagcccgacc gggctgctcc acatcggctc
     7201 gctgctgacc gccgtcgctt cctatgccga tgcacgcgca cacggcggaa ggtggctggt
     7261 tcgcatggaa gacctcgatc cgccgcgcga aatgccgggg gcggcaagcc atatcctgca
     7321 cacgcttgag gcattcggat tcgagtggta cggagaagtc gcctatcaga gccgccgtta
     7381 cgccctgtat gaagaaaccc tatgccgtct gaaaaccgcc ggactggtct atccctgcca
     7441 ttgcagccgc aaagactggc aggctgcggc agtccacggc gcagacggat tcgtctataa
     7501 cggacgttgc cgcaatccgc agcaacgccc tgcactgcaa ggcaaacagc ctgcgtggcg
     7561 catccgcgtc cccgaccgcg acatcggctt ttcagacggc atcgtcggcg gttacgccca
     7621 aaacctcgcc cgcgacatcg gcgatttcgt cctgcttcgt gcagacggtt actgggcata
     7681 ccagctcgcc gtcgttgccg acgatgccga acagggcgtt acccacatcg tccgcggaca
     7741 agacctgctt gtttctacgc cgcgccaaat ctatttgcag caatgtttgg gcgttccgac
     7801 accgcaatat gcccacctgc cgctgctgac caacgcacaa gggcagaaat ggtcgaaaca
     7861 gacgctcgca cccgcattgg atttaaaccg ccgcgaacaa ctcctccgcc aagtgttccg
     7921 ttacctcaac ctgcccgaag caccggaagc cgaccgccct gccgaactgc tcgactgggc
     7981 ggtggcacac tgggatatgg acaaagtgcc gaaacacgcc attaccaccc cctaaacacc
     8041 gcccgacaaa cgcacaaatg ccgtctgaag ccttcagacg gcatttcaca catacagccc
     8101 cgccctattc gcgcgtattt gcccgttcga cctctttcca cgcttcgaga atcaggctgc
     8161 cgtcgttgtc tttcaagagc gttgcgtcgg aaagcatacg ccgccaagtc cgcgcgcctt
     8221 tcaagccgtg catcagcccg aggctgtggc ggacgatatg gcgcaggatt gtgccgcgtc
     8281 cggcttggat ttgggcttgg ctgtatgtgt agaggcgttg caccaaatcg gcgtatccga
     8341 tcgggttcgc agtgtcgccg taaaacaatc tgtcccattc gcgcatcacc atcgggttgt
     8401 ggtacgcctc gcgcccgacc atcacgccgt caacgtgttg caggtgtccg gcgattgctt
     8461 cgttggtggt gatgccgccg ttgatgatga tttccagccc gggaaactcc tgcttgaggc
     8521 ggtaaacgta atcgtatttc aacgggggaa cgtcgcggtt ttctttgggg gaaagaccgt
     8581 ccagccaagc gttgcgggcg tggacgatga aggttttgca ggcggttttg tcgcgcaacg
     8641 tgccgacgaa atcggcaacg gtttggtatt cggtctgcct gtccacacca atgcggtgtt
     8701 tgacggtaac gggaataccg accgcgtcct gcatggcgtt gaggcagtcg gcaaccagcc
     8761 cgacttcgtt catcagacac gcgccgaacg aacctttctg cacgcgcgga ctggggcagc
     8821 cgcagttgag gttgacctcg ttgtagccgt atgcttcggc ggctttggcg gctttcgcca
     8881 aatcggacgg atcgctgccg cccagttgca gggcgacggg ctgctcgcct tcgttgaaca
     8941 tcaaaaagcg gtctttgtcg ccgtaaacaa tcgcaccggc attgaccatt tcgctgtaaa
     9001 gccaagcatt tcgggtaatc tggcgcgcca tataacggta gtgcctgtcc gtccagtcga
     9061 gcatcggggc gacggaaagg cggcgcgggg gaagggtgtg tgtattgtcg ttcattgtcg
     9121 atatttcatc attgcagatt caatttcaat ccggaacaac cttcattttt ggggaaatcc
     9181 gcgtcatgaa agagtccagc agtatggtta ccggcccgtc gttgcagagc gacacctgca
     9241 tatgcgtgcg gaaacgccct gtttcgacat gaatcccgtg tccgcgcaac agttccgccg
     9301 ttcgcaggta aagctgctgc gcctgttctg caggtgcggc ttgggaaaac gaaggccgcc
     9361 gcccgcttgc cgcatcggca taaagtgtaa actgcgacac cagcagcacc gcgccgccga
     9421 catctttcaa agacaggttc aacttgcccg cttcgtcttc aaacacgcgc aaatgggcga
     9481 ttttgtcggc gatatagtgc gcatcttttt ctgtgtcgct atgcgttacg ccgagcagca
     9541 cgacgaatcc gccgtcgatt ttgccacagg tttccgtgcc gttttcggac acgacatcca
     9601 cctttgcacc taccgttttc tgtatgaccg cacgcataag ccgtcctcct tacctgaacg
     9661 tgcaatgccg tctgaaaagg cttcagacgg catcggtatt ggaaatgcca ttacggtttg
     9721 acaccgtttt cttccaaaat ggcatcgatt ttcaagcggg ctttttcctg tctcaaacct
     9781 tgttccaact ggtttctgac caactcgaaa ggctgcgcgt cggggttttt cccgacctcg
     9841 ctgagtttga acagataata gcgttcgccc aatttgaccg gatcgcgggt aacgtcgccc
     9901 cgattcatcg ctgcaaactg cgaagccagc ggctcgggaa gctgctgcgc cataatgaaa
     9961 ccgtcaaaag cctgctcgtc gttcggataa cgcttcatca gcccttcaaa agacagccct
    10021 ttgagcagga gctgctgcgc ctgacgcgcc tcctcttcgg ttgcgaagct gacctgctgc
    10081 aatttgatca tgcggatttg ccgctcataa aattgacgca gtgcgctttc ggaaaccgtt
    10141 tccgaacgtt ccagaaaacg gacgtactcc tcggcataaa aagacgcttc ggcgatttta
    10201 aagcggtttt ggacatcctt atccttatcc aaaccttcct tcaatgccct gtttttcaaa
    10261 acttccaaag tttgcagccg acggacggca tcgtttcgga ttgcctgccc gtccggtttt
    10321 tgggactgct ccgcatgccg gtctgcctgc tgcatgatct gcgccaccag cgtatccacc
    10381 aaagccgggt cgatttcggg tgctttggct gccgcaaaac ctgccaacat tgcagcaata
    10441 actgcggcag cggttttttt ctgtttcatg gtattccctg tcctgcgcgg cggcaaaacg
    10501 cctgtctgaa cgtcttgccg ccgtatcccg ttttcagaat tattttgcag gtttgatgtt
    10561 tgccttgccc aacagtgcac cgacggcacg gtcaatccgt tccgcctgaa ggttgccggc
    10621 aatctgtcct ttcatttcat caaaagaagg cactttcacc tcgcggctgt cgttgacata
    10681 ataaacgccg tagaaatcgc cgtttttcag cggcgttgcc gtaaattcgc cttttttcaa
    10741 gtccttaatt gcctgataaa gcggcggaac accctgttcc aaatctttca gcggcacata
    10801 tccgaccggt gcgccggtct gtttggtacg gtcgttgagg gaatattgtt tcaagacggc
    10861 atcgaaacct tttttcgcct tcaagtcggc aaccgctttt tttgcatttt cttccttgtc
    10921 ggtcaggatt tcgcccaact ggacttcctg cgtacctttg taaaaaccgc tgatattgtc
    10981 atatgcggct tttacttcct gctcggaaac cggttgggtt ttggcgatat gcagcgcgta
    11041 tgcctcgccg ttcaagccat attttaccgc ctgccaaacg gttttgaagg acggtttctt
    11101 gtcgtcgccc gactttttcg cttcggcacg caatttggca agcgcatttt taaactctgc
    11161 cgaccggtcg agtttcaggc gtttcacttc ctgtgcgacc acggtgttga ccacttcgtt
    11221 ttccagcagg gattggcgca gttgcggcgt gtcttcggca cggctgtttt ccgcacggaa
    11281 tgcggcaacc tgcgcatcga tgacggaact gtcgattttc tgaccgttga cggttgccag
    11341 cgtttgggca aacaggctgc cggaacaggc aagcagtgca acggaagtca ggatttttgc
    11401 tttcataatc ttctctcttt aaattttaaa ttgaaatgtt cgggcagact tcattcagtc
    11461 cgccgtatgg aaatactcgt caggggtagc cgcccggatg ccgagcgcgt gaatcatgcc
    11521 gcctgaaaac aaatctttga gcagcgattt gaccgttttc tggcggttca ggcggcttac
    11581 gccttcaaaa cggccgctaa cgaccaaaac ggcataatgt ccgccgccgg tattgcccgc
    11641 gtgtcctttg tgcagatggc tctcatcgcc gatttccaac accagcggat cgagcgtctg
    11701 caggcgttcg cggatcaaat cgacggccgg cattatttga acaccgcttt aaacggcttg
    11761 atcagcactt cgctgtacac gcctgcatga acatagggat cgtcttccgc ccacgcctct
    11821 gccgcatcca aagactcgaa ctgcgccaca atcaaactgc ccgaaacgcg gttggagtcc
    11881 tccggcaaag gattcgggcc tgccgtcaac agccggcctt ccgacttcag cgtctccagc
    11941 cgtttgaggt gttcgggacg tgccgccata cgcgcttcat acacattctc cccgtctgtt
    12001 gccagcaaca taaaatattc cacagtcaat cctccttttt cagacaggta ctcagataaa
    12061 taccctgaat aataaagaaa acaagcatca gtgcagtcga gccgaacatt ttatagttga
    12121 cccattgcga ctcgaaccgg gtaaacacaa accagttggc gatacccata aaaatcagga
    12181 aaccgaccca catatacgtc aatttcgccc atacggcatc cggaagctga atctccctgc
    12241 cgatactcgc cttcaagccg tttttaccgg cgaggtggct gccccacagg aacagcgcgc
    12301 ccagccaaaa caaaacgctc ggcttccaca taatgaagcg gctgtcgccc aaaacaatgg
    12361 ttgcgccacc gaatatcaca atcagcacca gtccgaccca ctgcatcgta tccagctttt
    12421 tatatttcca atacagaaaa gccgcctgaa ccacaccggc aaccaaggcg accgccgtag
    12481 cggcaatcat atttttggta acggtatagg tggcgaaaaa caggatgacg gacaaaaggt
    12541 cgctgacgaa tttcatatcc aaatgagaaa gcaaatcaaa taaacgctaa tcatacaggc
    12601 agaaccctgt ttttgcacct gcaaaaccaa caaattttgt tttgattgat gcaaatatgc
    12661 acagatgttt ttgaaaaaag atggagatat gtcataattt gtaaaaacgg cgaatgattg
    12721 ccgtttaaaa tgtggcggcg gtcggtacat tcacatatta aatgcccgcc ggccgactgc
    12781 cccgccgatg cccgatgatg acgaaattta cagactgtac gcggtcaaac cgtattcagc
    12841 cgccaaccca caggggatac atcttgaaaa acaacagaca aatcaaactg attgccgcct
    12901 ccgtcgcagt tgccgcatcc tttcaggcac atgctggact gggcggactg aatatccagt
    12961 ccaaccttga cgaacccttt tccggcagca ttaccgtaac cggcgaagaa gccaaagccc
    13021 tgctaggcgg cggcagcgtt accgtttccg aaaaaggtct gaccgccaaa gtccacaagt
    13081 tgggcgacaa agccgtcatt gccgtttctt ccgaacaggc agtccgcgat cccgtcctgg
    13141 tattccgcat cggcgcaggc gcacaggtac gcgaatacac cgccatcctc gatcctgtcg
    13201 gctactcgcc caaaaccaaa tctgcacttt cagacggcaa gacacaccgc aaaaccgctc
    13261 cgacagcaga gtcccaagaa aatcaaaacg ccaaagccct ccgcaaaacc gataaaaaag
    13321 acagcgcgaa cgcagccgtc aaaccggcgt acaacggcaa aacccatacc gtccgcaaag
    13381 gcgaaacggt caaacagatt gccgccgcca tccgcccgaa acacctgacg ctcgaacagg
    13441 ttgccgatgc gctgctgaag gcaaacccaa atgtttccgc acacggcaga ctgcgtgcgg
    13501 gcagcgtgct tcacattccg aatctgaaca ggatcaaagc ggaacaaccc aaaccgcaaa
    13561 cggcgaaacc caaagccgaa accgcatcca tgccgtccga accgtccaaa caggcaacgg
    13621 tagagaaacc ggttgaaaaa cctgaagcaa aagttgccgc gcccgaagca aaagcggaaa
    13681 aaccggccgt tcgacccgaa cctgtacccg ctgcaaatac tgccgcatcg gaaaccgctg
    13741 ccgaatccgc cccccaagaa gccgccgctt ctgccatcga cacgccgacc gacgaaaccg
    13801 gtaacgccgt ttccgaacct gtcgaacagg tttctgccga agaagaaacc gaaagcggac
    13861 tgtttgacgg tctgttcggc ggttcgtaca ccttgctgct tgccggcgga ggcgcggcat
    13921 taatcgccct gctgctgctt ttgcgccttg cccaatccaa acgcgcgcgc cgtaccgaag
    13981 aatccgtccc tgaggaagag cctgaccttg acgacgcggc agacgacggc atagaaatca
    14041 cctttgccga agtcgaaact ccggcaacgc ccgaacccgc tccgaaaaac gatgtaaacg
    14101 acacacttgc cttagatggg gaatctgaag aagagttatc ggcaaaacaa acgttcgatg
    14161 tcgaaaccga tacgccttcc aaccgcatcg acttggattt cgacagcctg gcagccgcgc
    14221 aaaacggcat tttatccggc gcacttacgc aggatgaaga aacccaaaaa cgcgcggatg
    14281 ccgattggaa cgccatcgaa tccacagaca gcgtgtacga gcccgagacc ttcaacccgt
    14341 acaaccctgt cgaaatcgtc atcgacacgc ccgaaccgga atctgtcgcc caaactgccg
    14401 aaaacaaacc ggaaaccgtc gataccgatt tctccgacaa cctgccctca aacaaccata
    14461 tcggcacaga agaaacagct tccgcaaaac ctgcctcacc ctccggactg gcaggcttcc
    14521 tgaaggcttc ctcgcccgaa accatcttgg aaaaaacagt tgccgaagtc caaacaccgg
    14581 aagagttgca cgatttcctg aaagtgtacg aaaccgatgc cgtcgcggaa actgcgcctg
    14641 aaacgcccga tttcaacgcc gccgcagacg atttgtccgc attgcttcaa cctgctgaag
    14701 caccggccgt tgaggaaaat gtaacggaaa ccgttgccga aacacccgat ttcaacgcca
    14761 ccgcagacga tttgtccgca ttacttcaac cttctaaagt acctgccgtt gaggaaaatg
    14821 cagcggaaac cgttgccgat gatttgtccg cactgttgca acctgctgaa gcaccggccg
    14881 ttgaggaaaa tgtaacggaa accgttgccg aaacacccga tttcaacgcc accgcagacg
    14941 atttgtccgc attacttcaa ccttctgaag tacctgccgt tgaggaaaat gcagcggaaa
    15001 ccgttgccga tgatttgtcc gcactgttgc aacctgctga agcaccggcc gttgaggaaa
    15061 atgcaacgga aatcactttg gaaacgcctg attccaacac ctctgaggca gacgctttgc
    15121 ccgacttcct gaaagacggc gaggaggaaa cggtagattg gagcatctac ctctcggaag
    15181 aaaatatccc aaataatgca gataccggtt tcccttcgga atctgtaggt tctgacgcgc
    15241 cttccgaagc gaaatacgac cttgccgaaa tgtatctcga aatcggcgac cgcgatgccg
    15301 ctgccgagac agtgcagaaa ttgctggaag aagcggaagg cgacgtactc aaacgtgccc
    15361 aagcattggc gcaggaattg ggtatttgat tcccaactgc cctttcgcag atcaaggatg
    15421 ccgtttcaga cggcatcttt ttttgcctta tcggtgtaac ggataaagtt tgaaccggca
    15481 caggctcaaa cagcaggtcg acggcaacaa aatgccgtct gaaaccccta aaggcttcag
    15541 acggcattgg cggcggcggt atcaggcagt ttgataggca accgaatcgt cgccgctttt
    15601 cttttgaatg aactcgattt tgtatccgtc ggggtcttcg acgaaggcta tcacggttgt
    15661 gccgtgtttc atcgggccgg cttcgcggac gacgtttccg ccctgccgct tcacacgttc
    15721 gcaggcttcg taggcatcgt ccacttcaac cgcgatgtgt ccgtaggcgt tgcccaagtc
    15781 gtatcgttcc gtatcccagt tgtgcgtcag ttccaaaacc gtgctgtcgg tttcatcgcc
    15841 gtaaccgacg aaggcaaggg taaatctgcc ttcgggataa tcttttcggc ggagcagttt
    15901 catacccaaa acgttttggt agaaatcgag ggatttttcg agattgccca cgcggagcat
    15961 agtatggagt aagcgcattt tttgtgttcc tttcggtggt ggttaaactt cgattttatt
    16021 cggggtaaac gtctgccatt tgttgcaggc ggggcagtgc cagaaaaaga cttgtgattt
    16081 gaagtggcag tttcggcacc ggtacatcac gctgcgctgt agctgccgtc cgataaccga
    16141 acgcatcata tcggcatcgg ctttccaagc cggatccaaa tcgctgagtt tcaaaccaag
    16201 caggcggtac acgccgttga ggtcgggctt gcggcggaca agctcgacgg cggtttgcgc
    16261 ggcttctttc tcgcacttaa gcagcaggga tttctcgtac acgacattga tcaggtcaag
    16321 ttcgggaaac gtctgcatat atcctgtcag acggttcaag ccttcttcag gttttccctg
    16381 cgcggcatag gcttcgtaaa gcttctcgcc gaccatgctc aagtatgcat ggttttgctg
    16441 ctcgatggcg gcataggctt cgacggcggc agggaaattg ccttgtcggt gttcgatgtc
    16501 gcccaaaatc atgttggcac gggtgcattt tttgttggct tcgagtgcct tgccgacatt
    16561 gaaacgcgcg acatcgaaat tggacttgaa cagcgcggct tgggcaagtt cgcaataaaa
    16621 ctgggcgatt tcaaactgat aggtctgatc gtcatggctg agcagccggg cggtttcaac
    16681 cgctttttcc caatccctgt cctgttggta gatattgagc aggtgctgtc tggcttcacg
    16741 cgccatttta ccgtcttgca gccccaaaaa aatctgttcg gcacgatcga ccaaccccgc
    16801 actttggtag ttttgcgcca attcaaacag gacgcgcgcg cgcttttcgc cgaccgtatc
    16861 gggagaatcg agcattgtcc ggtgtatgtt gatggctttg tcgttttcgc cacgctgacg
    16921 gtaaagcttg cctagggtga ggtttaggtc gtatgactga ggctgctgat caatgacctc
    16981 tgccaattcc ctggcggcac gtccgctgtt gcggtcaacc aaggcatcca gacttttata
    17041 aaatcccgac ggtatgcttt ttgcctgctt taatacagtc ttcatatcca cacgggcggc
    17101 aaaccagccc atcgcgaaga aaacgggcaa aaggataatc ggcagcagga taatccacaa
    17161 ttcattgtcc atatcggctt tctcaaggct gtttggcaga ttcgggcgca ttttgcgccg
    17221 gtggtgcggt cagctctttc cccgtcaaac gcgcattttt ctttacttcg gcacgcaacc
    17281 tgccgttctc gccacgtaac gacaacaacc gtccgaacaa ggcaaacatt ccgaacacga
    17341 tgccgacgac aaacgcgccg aacaatacga caatcagcgg caaatcgact ttctgtccgg
    17401 gcaggtagga gaaggtaacg gcatccgtat taatgacggc aagcagcagg aagagcagca
    17461 ggataatgat tttgatgacg gtatagataa gtttcatgtt tgctccgtaa ataaaaacgc
    17521 cgcccggaca gcttcgcact ctgaaccaag attgcgctag tttaaacgat ttgcacggtt
    17581 tcggatagga tgcggcagcg tgttcggacg acatacggag tatgcgattg ccgacaattt
    17641 taccaaatac accgttcctt tccatttgaa aaataacgga ttggacaccg catcgacaga
    17701 aaaacccgcc gcgcacttgt caaaaccctg tttgcaggcg tatctttaca atcttcaaat
    17761 tcaaaccgtt cattgaaaca tatcagaata agaaaggctt tacatcatga gcagacccgt
    17821 acccgccgta ttcggcagcg tttttcacag tcaaatgccc gtcctcgcct accgcgaagg
    17881 caaatggcag ccgaccgaat ggcaatcttc ccaagacctc tccctcgcac cgggtgcgca
    17941 cgccctgcac tacagcagcg aatgtttcga gggactgaaa gccttccgtc aggcagacgg
    18001 caaaatcgta ctgttccgtc cgactgccaa catcgcgcgt atgcggcaaa gtgcggacat
    18061 tttgcacctg ccgcgccccg aaacccaagc ctatctcgac gcgctaatcg aattggtcaa
    18121 acgcgccgcc gatgaaattc ccgatgcgcc tgccgccctg tacctgcgtc cgaccttaat
    18181 cggtaccgat cccgtcatcg gcaaggccgg ttctccttcc gaaaccgccc tgctgtatat
    18241 tttggcttcc cccgtcggcg actatttcaa agtcggctcg cccgtcaaaa ttttagtgga
    18301 aaccgaacac atccgctgcg ccccgcatat gggccgcgtc aaatgcggcg gcaactacgc
    18361 ttccgccatg cactgggtgc tgaaggcgaa agccgaatac ggcgcaaacc aagtcctctt
    18421 ctgcccgaac ggcgacgtgc aggaaaccgg cgcgtccaac tttatcctga ttaacggcga
    18481 tgaaatcatt accaaaccgc tgaccgacga atttttgcac ggcgtaaccc gcgattccgt
    18541 actgacggtt gccaaagatt tgggctatac cgtcagcgaa cgcaatttca cggttgacga
    18601 actcaaagct gcggtggaaa acggtgcgga ggcgattctg accggtacgg cagccgtcat
    18661 ctcgcccgtt acttccttcg tcatcggcgg caaagaaatc gaagtgaaaa gccaagaacg
    18721 cggctatgcc atccgtaagg cgattaccga catccagtat ggtttggcgg aagacaaata
    18781 cggctggctg gttgaagtgt gctgatgctt taaataaaaa aatgccgtct gaaacccgtt
    18841 tggcgtttca gacggcattt tcgcgttcgg accatttccg ctgcacctgc agcaagtcgg
    18901 gcatttccct agaaatacgc ttcagacggc aaaccgccgc ccgaaaccga tacgcggtac
    18961 ggacggcgca cggatttgaa aacggcggat tatccctcgg tgctcaaggc attaatgctg
    19021 taaccgccgt caacgtaagt gatttcgccg gtaatgccgg acgacaggtc ggacagcagg
    19081 aaggcggcgg tattgccgac ttcttcaatg gtaacgttgc ggcgcagcgg attgtgggcg
    19141 gcgacgtgtc ccaaaagttt gccgaaatcg gcgataccgg aggcggcaag cgttttaatc
    19201 gggccggcgg aaatgccgtt gcagcggatg ccttctttgc ccagacaggc ggcggtaaaa
    19261 cggatgcccg cctcaaggct ggcttttgcc atacccatca cgttgtaatt tggaatcgcg
    19321 cgcaccgcgc ccaagtagct cagggcaacg atggcggagt ttctgccgcg catcatcgga
    19381 cgggcggctt ttgccaatgc gggcaggctg tatgcggaaa tttcgtgtgc ggtgttgaac
    19441 gcttcgcggc tgatgctgtc gaggaagtcg ccgctcaagg cttctttcgg cgcgaagccg
    19501 atggaatgca ccaaaccgtc caagccgtcc caatgtttgc ccaagtcggc gaacacttgg
    19561 ttgatttcgt cgtcgctggc gacatcgcag cggaatacga gttcggaacc caattccgcc
    19621 gccattttgc ggacgcgctc ttccagtttg tccacaacgt aggtaaacgc cagttccgcg
    19681 ccttgttcgc ggcaggcttt ggcgatgcca taagcgatgg aacgctcgga aatcatgccg
    19741 gtaatcagaa tttttttgcc ttgcagaaaa cccattttgt atccttcaaa tagtgttcgg
    19801 ttcattctaa accgttgatt atagcaaatt gtccctgttt ctgtgttttc acgttgcagc
    19861 atgcaaacgg caatgccgtc cgaagcggat ttcagacggc atcggacgtt tcaaatacgg
    19921 tttaaggcat cagatgccgc gcaacaattc gttcacgctg gttttcgcac gggtttgcgc
    19981 gtccacgcgt ttgacgatga cggcgcagta aaggctgtgg ctgccgtctt tggaaggcat
    20041 actgccggac acgacgaccg aaccggccgg tacgcggcct tggtagattt cgccggtggt
    20101 gcggtcgaag attttggtgg attgaccgat gaacacgccc atagaaatca cgctgccttc
    20161 ttcgacaatc acgccctcaa cgatttcgga acgcgcaccg atgaagcaat tgtcttcaat
    20221 aatggttggg ctggcttgca ggggttcgag tacgccgccg atgccgacac cgccgctcaa
    20281 gtggacgttt ttgccgattt gcgcgcaaga gccgacggtc gcccaagtat cgaccatcgc
    20341 accttcgtca acgtatgcgc cgatgttgac gtaagacggc atcagcacga catttttcgc
    20401 cacaaagctg ccgcgtcggg caaccgcacc cggaacggcg cggaagcctg cgtttttgaa
    20461 ctcgtcttca gaccagtcgg caaacttggt cggcactttg tcgaagtatt tgttcacacc
    20521 gtcgttgagg atttcgttgt cttggatgcg gaaggacagc aacacggctt ttttcgccca
    20581 ttcgttaact ttccattcgc ccacgcccaa gcgttcggcg acgcgcagtt tgccggaatc
    20641 gagttggcgg atggtttcca acacggcttc tttaacttcg ggagtaacgg tggtcggatt
    20701 aatgtccgcg cggttttcaa aggcggtttc gataatgttt tgcaaagaca taatgtttcc
    20761 ttatgtgaga tgtttcgtgg gacgcttgcc ggtattttca agcagtatgt tcatttgaaa
    20821 tgaatgcgct attgtgccac gcaaacgcat attcgtcagc aatacgcggg cggttgccga
    20881 acattggcgt ttcggaatcg ggcgggcggc agtaccttta tgccgcaccg ccgcctttca
    20941 gacggcattc gcggtaaaac gccatcagcc cttcggtcga ggcatcgtgt acggacgtgc
    21001 cgccttccag ttcgccgatg atggtttttg ccaactgttt gccgtattcc accccccact
    21061 gatcgaaggg gttgacgttc catatcgcgc cttggacgaa ggttttgtgt tcgtaagccg
    21121 ccatcagcat acccaaattg tagggcgtga ggcggtcgag caggatgctg ttgctggggc
    21181 ggttgccagg gaactctttg tgcggcgcga ggcgttcgcg ttccgcttcg ggcaaatctg
    21241 ccagttcggc gcgtgcttcg tccaaggttt tgcccttcat cagggcttcc gcttgggcaa
    21301 aggcgttggc aacggtaaaa cggctgcgtc cgtcctccac gccctgcgcc gtcatcggga
    21361 cgataaagtc gcagggaatc aggcgcgtgc cttgatggag cagttggaaa taggcgtgct
    21421 ggcagttgac cccttcaccg ccgaacacga tgccgcccgt tttgcacacg gcgggactgc
    21481 cgtctgaagc gcggcttttg cccaaactct ccatatcgag ctggttcagc cacaccggca
    21541 gcaggcgcag gttgtggctg tacggaacgg cggtctgccc gtccgcgtgt tggaaattgt
    21601 tataccacac ggcaatcagt gccatcagaa cgggaatgtt gcggcgcggc ggcgtgtgga
    21661 aaaaatggct gtccatcgcg tgcgcccccg ccaacaactc gcggaaacgc gccccgccga
    21721 ccgcaaccat cacgggcaaa ccgacgggcg accagacgga atagcgtccg cccacccagt
    21781 cgtacatcgc aaacacgcgt tccgccgcga taccaaaagc cgcagctgcc gcagtgtcgg
    21841 cagacaccgc gcaaaaatgg cacgccgttt cggattccga gaaccccgca ccgcgatacc
    21901 acgccttgac tgcctgtgca ttgagcaggg tttccggtgt tttgaaggac ttgctggcaa
    21961 cgcaaaacac tgtcgtttcg gggttcagac ggcataaaac cgcatccagg caggcaggat
    22021 cggcgttggc ggcaaaatgg acggtgatat gccgtctgaa cggctcaagt gcctgcacgc
    22081 acattgccgg cccgaggtcg gatccgccta tgccgatgtg gacaaaatcc gtaatccgtt
    22141 ttccggttgt cccctgatac gaaccgtcgt ccaaactgtg tgcaaactcc aacgcacgat
    22201 ttaactcgcg gcggatttcg ggcaacacgt ccctgccgtc cgcataaacg gcatccgcac
    22261 cgtcgggtag gcgcaaagcc gtatgcagcg cggcacgccc ctcgctgccg ttgactttcg
    22321 cacccgtccg caaagcacgc attttccctt ccaaatccgc cgtctccgca agacggcaga
    22381 gcagttgcag cgtatcttcg cccaaacggt ttttgctgta atcgaacaac atcccgtcca
    22441 aacgctcatg catacgctca aaacggtcgg gttcgcaggc aaagcggtcg cgcaaaagga
    22501 catgacgcgt atcctgataa tggcgttcga gcgcatacca tgcacgggta aaagcattca
    22561 tctgttttcc ttgatttttc agaaccggat taaaatgtag cagaatgtag tttaacaaac
    22621 ggcagcggct ttggcgaatc tccggaacac cgcccgccgc gtccaatagc accttatttc
    22681 catatggcga aaatatagtg aattaacaaa aatcaggaca aggcggcgag ccgcaaacag
    22741 tacaaatagt acggaaccga ttcacttggt gcttcagcac cttagagaat cgttctctct
    22801 tgagctaagg cgagccaacg ctgtaccggt ttttgttaat tcactatacc ctccggccgg
    22861 catttgaccc gcaacaatat cctgcaagat ttattgtgta cgcataaatg ccggacagcc
    22921 gcctaaataa ggtataatcg catccgattc tgtcccgttt gccgcccgca ggcgggatgt
    22981 cggcggtttt catcttaccg ggaacacgcc ggtactgttt tttaacgatg tttcttacat
    23041 tttattccaa ttactttacg gggctagaat atggctaaaa acggaggatt ttctttgttc
    23101 gcaaagaaag aaaaacgctt tatctttgaa ggcaggcatt ccgcctccga caaactggtc
    23161 aacggcgaag tatccgcgtt taccgaagaa gaggcgcgca aaaaactggc aaaacgcggc
    23221 atccgcccgt tgcagattac ccgtgtgaaa acaagctcca agcgcaaaat cacacaagaa
    23281 gacatcaccg ttttcacccg ccagctgtcc acgatgatta aagcgggcct gccgctgatg
    23341 caggcatttg aaatcgtggc gcgcggacac ggcaacccgt ctatgacgga aatgctgatg
    23401 gaaatccgag gcgaagtgga acagggcagc tcgttgagcc gcgcattctc aaaccaccca
    23461 aaatatttcg accgcttcta ctgcaatctg gttgcggcgg gcgaaacggg cggcgtattg
    23521 gaaagcctgc tggacaaatt ggcaatttac aaagaaaaaa cccaggccat ccgcaaaaag
    23581 gtaaaaaccg cactgaccta tccggtatcc gtcatcgccg tcgccatcgg tttggtattc
    23641 gtgatgatga ttttcgtact gcccgccttt aaagaagttt acgccaatat gggcgcggag
    23701 cttcccgcac tgacccaaac agtgatggat atgtccgact ttttcgtctc atacggctgg
    23761 atggtgctga tcgcactggg ctttgccata tacggcttcc ttaaattgaa ggcgcgttcg
    23821 attaaaatcc aacggcgtat ggatgccata ctgctgcgta tgccgatttt cggagacatt
    23881 gtccgcaaag ggacgattgc ccgctggggc aggacgacgg cgacgctgat tgcggcaggc
    23941 gtgcctttgg tcgatgtatt ggactccact gccggcgcgg cgggcaattt aatctatgaa
    24001 gaagccaccc gggaaatccg tacgcgcgtc atccaaggtt tgtctatgac ttcggggatg
    24061 cgtgcgacgg aactgttccc caatatgatg ttgcagatgt cttccatcgg cgaggaatcg
    24121 ggttctttgg acgatatgct caacaaagcc gccgaatttt acgaagacga ggtggacaat
    24181 gcggtcggca ggctgtccgc tatgatggag ccgatcatta tcgtgatttt aggcttggtc
    24241 atcggcacgc ttctggtcgc catgtatctg ccgctgttta atttgggcaa cgtggtcgcc
    24301 tgatttgccg cacagatccg gcgcggattc gctctgcgcc ggtttgtttt tgttttgaat
    24361 acattgagaa caaaatatgt ctgatttgtc tgtattgtcg ccgtttgccg tgcctttggc
    24421 agcggtgttc gggctgctgg tcggcagttt cttaaacgtc gtcatttacc gcgtgccggt
    24481 catgatggaa cgcggctgga cggtatttgc caaagaatat ttaaacctgc cgctgaccga
    24541 agaggaaagc cgtaccttca acctgatgaa accggattcc tgctgtccca aatgccgcgt
    24601 gccgatacgc gcgtggcaga acatcccgat tgtcagttac ctgctcctgc gcggcaaatg
    24661 cgcctcctgt caaaccaaaa tcagcatacg ttatccctta atcgagctgc tgaccggcgt
    24721 attgttcggg ctggtcgcct ggcaatacgg ctggtcttgg attacgctgg gcggattggt
    24781 actgaccgcg tttctgattt ccctgacctt tatcgatgcg gacacccaat acctgcccga
    24841 ctcgatgaca ctgcccttga tttggctggg gctgatattt aatttggacg gcggcttcgt
    24901 gcctttgcag tctgccgttt taggtgcggt tgccggctat ggttcgatat ggcttttatg
    24961 cgcggtatat aaactgatta aaggcgaaat cggtatgggc aacggagatt tcaaactgat
    25021 tgccgcattg ggcgcgtggc tcggcatatc cgcattgccc gtgctgattt ttgtttcctc
    25081 gctgatcggt ttggtcgcgg caatcgttat gcgcgtcgcc aaggggcagc attttgcctt
    25141 cggccccgca ctgacagttt cgggctggat aatttttacg gcaaacgatt ccgtatggcg
    25201 ggcggtcaac tggtggctga cccatccggt gctgtaagat gacggtatgg gtcggactga
    25261 ccggcggaat cggcagcggc aaatcggcag ccgcgcaatg ttttgccgat ttgggcgtgc
    25321 cgcgcatcga tgcggacgcg gcggcgcact cgctgacggc ttcagacggc atcgccctgc
    25381 cggaaatcag gcggctgttc ggcgacaccg ttttcgacac acagggtttg ttgcgacgcg
    25441 acatattgcg taaagaagtc tttgcctccc catcgcgaaa agccttgctc gaatccgtga
    25501 tgttgccgct gattttctca gaaatcaaaa aacagcaaga aacctttacc gatgcggctt
    25561 acggcattgt cgaaattccg ctgctgacgg aaaagcgtca atttatcagc ctgatacggc
    25621 gtgtcctgac cataagcgca cctttggaaa aacgtatcgg cagggtgatg gcccgcagcg
    25681 ggctgacgcg cggcgaggtg gcggacatca tcagccatca ggcatccgaa tccgaacgcc
    25741 tgctgcttgc agacgatgtg ctgctcaatg acggcagcct caaaagcctg cgtgagaaaa
    25801 caatgcgcct gcacgcgttt tattcaggga ttttcgcctc aaaaccaaca caaggaaaac
    25861 acaatgactg aatcgcggca aacacgcctt caagtcaaat gtccgacctg tcaaacagca
    25921 gtagtatggg aacccgaaaa cgcattccgc cccttctgtt cgcaacgctg caaactgatc
    25981 gacttgggcg gatgggcaga cgggaaatat acggtttccg gccaaacgga aagtttgccg
    26041 gaaatatccg aacccgacat ggcataccgc tgaccgcccc gccttcccgg caaacaccct
    26101 gaaagtcaaa tgccgtctga aacaaacacg cttcagacgg cattttcatt ctcaaaccta
    26161 atcgttggta tttgccgtta cctcttccaa tgaagtaatg ccctgcataa ctttcaaaat
    26221 accggcccgg cgcaaatcca ccataccctc cttataggca acgtccaaaa tatccacttc
    26281 cgtaccgttg ttcataatca cacgctgcat ttcttcgctg atgggcataa cctcatacac
    26341 gcccgcacgc cccttataac cctgcccccg gcaacggtcg caaccgacgg cgcggtaaag
    26401 tttccaatct tttgcaaggt cctcatcggt gaagccgact tccttcaaag cagaggcaga
    26461 cgggcgttcc acttcctgtt tgcagctcga acacagcctg cgtaaaagac gctgcgccat
    26521 aatcaggctg accgaactgg caatattaaa cggcgcgaca cccatattca gcatacgcga
    26581 caacgtcgcc ggcgcattat tggtgtgcag ggtggaaaac accatatgcc ctgtttgtgc
    26641 cgccttaatc gcaatatcgg cagtttccaa atcacgaatc tcaccgacca taatgatgtc
    26701 cgggtcctga cgcaggaaag acttcaaagc agcggcaaaa gtcaggccct gcttatcatt
    26761 gacgttaacc tgattgatgc ccggcaggtt aatctcggca gggtcttccg ccgttgcaat
    26821 atttaccgac tccgtattca aaatattcaa acaggtatag agcgacaccg tcttacccga
    26881 acccgtcgga ccggttacca gcaccatccc gtagggacgg tgaatcgctt ccaacaacaa
    26941 ttttttctga aacggctcaa aaccgagctg gtcgatgttc aaagacgcgg catcggaatt
    27001 caaaatccgc atcacgacct tttcgccaaa cagcgtcggc aatgtgctga cacggaaatc
    27061 gacaggcttg ccgccctttt gaaaggtcag ctgcatcctg ccgtcctgcg gtatccgttt
    27121 ttcggaaatg tccaaacgcg acattacctt aatccgggaa gcaagctgcc cccttaccgc
    27181 aatgggcggc tgaaccacct cgcggagctg cccgtccaca cggaaacgga tacgggcatt
    27241 gtgttcgtaa aactcgaaat ggatgtccga tgccccgctg cgcaaggcat ccgacaaagt
    27301 cttatggata aacctcggaa cagggccgtc ttctgcctcc tcgttgtcga tatacagggt
    27361 gtggctttcc tcttcctcct gcccctcccc aagctcctga agcagcgatg tcgaacgcga
    27421 acccacccaa tcgagcaaac ccgccaactg gtcatcctcg acaatgacca actcaacctc
    27481 aatccctgcg gcagaaacgg ttttctgaat ttgcggcatc tgtgtcggat cggaaaccgc
    27541 aaaaaatact ttgtcgcccc gacggaaaac cggcacacag tggaactcca ccatctgctc
    27601 ctccgtcaac acccccatca gcaccctgtg gcgcggataa tgacgcaaat caagaatcga
    27661 ataactgaac acccttgcaa tcaatgccgc aagcgacttg ggcgaaatga cgccgtctga
    27721 aaacagtatc ggcaacactt ccttacccgc ctgcgactcc ttgtagtaat gctcggcctg
    27781 ctcaacagta accacctggt tttgaaccag aatcctcagc aaacctacgc tcatacgacc
    27841 ttatccccaa atttattcat tgttatacct gtacagctt
//
LOCUS       DBBZYD010000017        25486 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.017, whole genome shotgun sequence.
ACCESSION   DBBZYD010000017 DBBZYD010000000
VERSION     DBBZYD010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.017"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            203..1879
                     /gene="ettA"
                     /locus_tag="ACJJDL_000595"
     CDS             203..1879
                     /gene="ettA"
                     /locus_tag="ACJJDL_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HGG7573363.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVGTLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
     gene            complement(1939..2424)
                     /locus_tag="ACJJDL_000596"
     CDS             complement(1939..2424)
                     /locus_tag="ACJJDL_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HGG7573364.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(2417..3373)
                     /gene="thiL"
                     /locus_tag="ACJJDL_000597"
     CDS             complement(2417..3373)
                     /gene="thiL"
                     /locus_tag="ACJJDL_000597"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HGG7573365.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            complement(4194..4916)
                     /gene="rmpM"
                     /locus_tag="ACJJDL_000598"
     CDS             complement(4194..4916)
                     /gene="rmpM"
                     /locus_tag="ACJJDL_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HGG7573366.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPVVVVEQAPQYVDETISLSAKTL
                     FGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVA
                     NNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRR
                     VDVKIRSIVTRQVVPAHNHHQH"
     gene            5280..6230
                     /locus_tag="ACJJDL_000599"
     CDS             5280..6230
                     /locus_tag="ACJJDL_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HGG7573367.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(6343..7077)
                     /gene="fnr"
                     /locus_tag="ACJJDL_000600"
     CDS             complement(6343..7077)
                     /gene="fnr"
                     /locus_tag="ACJJDL_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HGG7573368.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTYFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            7282..8703
                     /gene="hemN"
                     /locus_tag="ACJJDL_000601"
     CDS             7282..8703
                     /gene="hemN"
                     /locus_tag="ACJJDL_000601"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HGG7573369.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(9056..10630)
                     /locus_tag="ACJJDL_000602"
     CDS             complement(9056..10630)
                     /locus_tag="ACJJDL_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HGG7573370.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            10955..12055
                     /locus_tag="ACJJDL_000603"
     CDS             10955..12055
                     /locus_tag="ACJJDL_000603"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HGG7573371.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGTDELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAELTQIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDKE
                     TRAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFARPHPKSTGRELFALNWLETYLGGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAANARQMYICGGGIRNPVLMADLAECFGTRVSLHSTADLNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            12174..13115
                     /gene="mafA"
                     /locus_tag="ACJJDL_000604"
     CDS             12174..13115
                     /gene="mafA"
                     /locus_tag="ACJJDL_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7573372.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNGMGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWTGPYKVSKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            13119..14387
                     /gene="mafB"
                     /locus_tag="ACJJDL_000605"
     CDS             13119..14387
                     /gene="mafB"
                     /locus_tag="ACJJDL_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HGG7573373.1"
                     /translation="MKPLRRLTNLLAACAVAVAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVETLVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            14390..14707
                     /locus_tag="ACJJDL_000606"
     CDS             14390..14707
                     /locus_tag="ACJJDL_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573374.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            14841..15470
                     /locus_tag="ACJJDL_000607"
     CDS             14841..15470
                     /locus_tag="ACJJDL_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HGG7573375.1"
                     /translation="MVKTADGYKAIARIRTGDRVFSKDEASGKTGYKPVTARYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSGGKWIKAEDLKAGSRLLSESGKTQTVRNIVV
                     KPTPLKAYNLTVADWHTYFVKGSQAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESRIAELKNKIIPGMPKNERLKIEKTIKNITKNANRKAKGEEHGRRGR"
     gene            15451..15906
                     /locus_tag="ACJJDL_000608"
     CDS             15451..15906
                     /locus_tag="ACJJDL_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573376.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILGTFMYEPPDEF
                     RTEYYESPDSNLLIAVKKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            16127..16486
                     /locus_tag="ACJJDL_000609"
     CDS             16127..16486
                     /locus_tag="ACJJDL_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573377.1"
                     /translation="MASYVSIKGWIECSDDDIKIIQENINNFWNNCPFNIEEKESAKI
                     YKSGWVFPTNSFNWSSYIFFGACVKSYFIIYFEKCIKTIMELDIEISGFFELDYYEDS
                     YKVHWKINNGNLIQTTN"
     gene            16701..17471
                     /locus_tag="ACJJDL_000610"
     CDS             16701..17471
                     /locus_tag="ACJJDL_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HGG7573378.1"
                     /translation="MVKTADGYKAIARIRVGDRVFAKDEASGKTGYKPVTTRYGNPYQ
                     ETVYIEISDGIGNNQTLISNSIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDRAETEGVWVHNDCPYGSSSAKGKSGSERNTAKRGT
                     FRQETLKNAWDLAADGSQPNSKKCPTCGKDVYGNPHNKEKRNTKDGWDGSHNPSWSNR
                     QHSSDRKEQLNDYNKGVSLECRHCNRSGGNKDERFKKK"
     gene            17468..18013
                     /locus_tag="ACJJDL_000611"
     CDS             17468..18013
                     /locus_tag="ACJJDL_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HGG7573379.1"
                     /translation="MITVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIRLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGGHYNTVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVDNLSDMNRKPFVW"
     gene            18149..18823
                     /locus_tag="ACJJDL_000612"
     CDS             18149..18823
                     /locus_tag="ACJJDL_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HGG7573380.1"
                     /translation="MVKTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTARYGNPYQ
                     ETVYIEISDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGNQAETEGVWVHNACPIKPKPTNHAQQRKEEAKNDSH
                     RSVGDSNRVVREGKQYLDSDTGNHVYVKGDKVVILTPDGRQVTQFKNSKANTSKRVKN
                     GKWTPK"
     gene            18801..19082
                     /locus_tag="ACJJDL_000613"
     CDS             18801..19082
                     /locus_tag="ACJJDL_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573381.1"
                     /translation="MGNGHQNNRSPLEKRIFYLEHSGQYLMICALSDYSQNKHTVVMA
                     NFLYPNEKMDWRNLDDLFNELVLEELQSSFMDWYPTIEEAISHHLEDFS"
     gene            19461..20594
                     /locus_tag="ACJJDL_000614"
     CDS             19461..20594
                     /locus_tag="ACJJDL_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573382.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NTNAFVAKLARLFRNADRAVVIVKESMRTEESLAGTVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGEEVWLDYYIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGYGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMTRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRI
                     VREEKQGDRLPDFPLNLEDLDKEVRRYAEAAARRSGGRRDLSH"
     gene            complement(20681..20956)
                     /locus_tag="ACJJDL_000615"
     CDS             complement(20681..20956)
                     /locus_tag="ACJJDL_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573383.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDTNLNGLNLWMKKGVENLWDDTVGKKARLMCISVFWIVVFNL"
     gene            complement(20973..21746)
                     /locus_tag="ACJJDL_000616"
     CDS             complement(20973..21746)
                     /locus_tag="ACJJDL_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HGG7573384.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEQTSFNNPEPMTGFE
                     HTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINLIEISVYYKKTDQGW
                     VLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPE
                     YEAYEDKRHIPENPYFHEFYYIKKGENPAIITHWNNRVNQAEEDNYSTSVGSCINGFT
                     VQYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK"
     gene            complement(22132..22407)
                     /locus_tag="ACJJDL_000617"
     CDS             complement(22132..22407)
                     /locus_tag="ACJJDL_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7573385.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALKQEIAVKKLTAAQKRKLWEQAEKMPSET"
     gene            complement(22404..23687)
                     /locus_tag="ACJJDL_000618"
     CDS             complement(22404..23687)
                     /locus_tag="ACJJDL_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7573386.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFASGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWPEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGPFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(23843..25261)
                     /gene="glnA"
                     /locus_tag="ACJJDL_000619"
     CDS             complement(23843..25261)
                     /gene="glnA"
                     /locus_tag="ACJJDL_000619"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HGG7573387.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGETAYFGPEPEFFVFDGIEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPTVKGGYAPVAPIDCGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
BASE COUNT         7048 a         6570 c         5997 g         5871 t
ORIGIN      
        1 tgctttggaa aatccgaaat ggttgccggt gcggcgatct cctatcatta ttattttttt
       61 tgtctgtata atttcaaagg gataggcgga ttttatgaat cctgcccgat tttggcaata
      121 ccggttcgcg gataaactgg cttaaatcaa attatcggtt aaaatggccg tctgaaattt
      181 gtttgatgaa aacgagaaaa ccatgtccca acaatacgtc tattctatgc tgcgcgtaag
      241 caaggttgtg ccgccgcaga aaaccatcat taaagatatt tccctttctt tcttccccgg
      301 cgcgaaaatc ggcctgctcg gtttgaacgg cgcgggcaag tccaccgtgc tgcggattat
      361 ggcgggtgtg gataaggaat ttgagggcga agccgtgccg atgggcggca ttaaaatcgg
      421 ctacctgccg caagagcctg agcttgatcc tgaaaaaacc gtgcgcgagg aagtggaaag
      481 cggtttgggc gaagtggctg ccgcgcagaa acgtttggaa gaagtgtatg ccgagtacgc
      541 caatcctgat gcggattttg acgcgttggc agaagagcag ggccgcttgg aagcgattat
      601 tgcggcaggt tcgtccacgg gcggcggtgc ggaacacgaa ttggaaatcg ccgccgacgc
      661 gctgcgcctg ccggaatggg atgccaaaat cgataatttg tccggcggtg aaaaacgccg
      721 cgttgccttg tgcaaactct tgttgagcaa acccgatatg cttttgctgg acgagccgac
      781 caaccacttg gacgcggaat ctgtcgagtg gctggagcaa tttctcgtgc gcttccccgg
      841 tacagtcgtt gcggtaacac acgaccgcta cttcctcgac aacgccgccg aatggatttt
      901 ggaactcgac cgcggccatg gtattccgtg gaaaggcaat tactcgtctt ggctggagca
      961 gaaagaaaaa cgcttggaaa acgaggcaaa atccgaagcc gcgcgcgtga aggcgatgaa
     1021 gcaggaattg gaatgggtgc gccaaaatgc caaaggccgc caagccaagt ccaaagcgcg
     1081 tttggctcgt tttgaagaaa tgagcaacta cgaataccaa aaacgcaatg aaacgcagga
     1141 aatcttcatt cccgtcgccg agcgtttggg taacgaagtg attgaatttg tgaatgtttc
     1201 caaatcgttc ggcgacaaag tgctgattga cgatttgagc ttcaaagtgc ctgcgggcgc
     1261 gattgtcggc atcatcggtc cgaacggcgc gggtaaatcg acactgttta aaatgattgc
     1321 gggcaaagag cagcccgatt ctggtgaagt gaaaatcggg caaaccgtga aaatgagctt
     1381 gattgaccaa agccgcgaag gtttgcaaaa cgacaaaacc gtgttcgaca acattgccga
     1441 aggtcgcgat attttacagg tcgggcagtt tgaaatcccc gcccgccaat atttgggacg
     1501 cttcaatttc aaaggcagcg accaaagcaa aatcacgggg cagctttccg gcggcgaacg
     1561 cggacgtttg cacttggcaa aaaccttgtt gggcggtggc aatgtgttgc tgctggacga
     1621 accgtccaac gacctcgacg tgggaaccct gcgcgcgttg gaagacgcat tgctggaatt
     1681 tgccggcagc gtgatggtga tttcgcacga ccgctggttc ctcgaccgta ttgctacgca
     1741 tatcttggct tgcgaaggcg actccaaatg ggtgttcttt gacggcaact atcaggaata
     1801 cgaagccgac aagaaacgcc gactcggcga agaaggcacg aaaccgaaac gcatcaaata
     1861 caaaccggta acgcgttaac ctccgaaaca atgccgtctg aaaggctttc agacggcatt
     1921 tttacaaggc agcaccgttt aaaacagcat tgcaatcctc aagacaatca aagtcatcac
     1981 cgcagccgcc atatcgtccg ccataatgcc caaaccgccg tgcagattct tgtcaaacca
     2041 accgacggga gacggtttga gcgcgtcaaa cagacggaat aggacaaatg ccgccagcca
     2101 ccacgtccac ctgaacggca caaacgccag cacaaacagc atggcgacaa tctcgtccca
     2161 aacaatccca ccatggtcgc tgacacccgt ttcacgttcc gcataagcgc aaatgcgtat
     2221 gccccacata aacagcacga tacacaaaaa agccagcagc agcccgtcta tgccgagcaa
     2281 aatcagcaca aatgccaaag gcagtgccgc caaagtgcca aatgtacccg gcgcgaacgg
     2341 agccagcccg ctgccgaaac caaaagccaa aaaacacaac ggtcgtttca acagccacgc
     2401 aaagtcaggt ttaaaatcag ccaaaatgat cgaatcctaa agaatgtagt tccaattccc
     2461 tgccgtcggc atctaaaacc ttcagacggc atcctccgtt gattttgccg atgcgcgtta
     2521 ccggcacgcc gcaccgttct gccgcatcaa gcacgcggct gcggcaactt tccggcgcgg
     2581 taaacaccag ctcgtaatcg tcgccgcccg ccaaagtata agacagccat tgcgctcggg
     2641 gcaaaatatc tttcaatacg gataaagacg gcagcgaatc ggcccaaatt tccgccccca
     2701 cgccggaagc ggtcaggata tgccccaaat cttgcgcgag gccgtctgaa acatcctgcg
     2761 ccgcccgggc aaacggcaac agcgcaagcc ccagcccaac ccttggctcg gggcggagca
     2821 gcttttgttc gcattcggca aacacatcat ccggcaacac acaccgtttc agacggcagt
     2881 tcaaagccgc cgccgccata ccgacacgcc ccgacaccca aatatcgtcg cccgcaaccg
     2941 ccgcatcacg ccgcaatgcc ctacccttcg gcaattcgcc gataatggtt acattgaacg
     3001 ccatatcgcc cttggtcgta tcgccgccga ttaacgttac gccaaacttt tttgccaaac
     3061 cgaaaaagct gccgcaaaac cgttccagcc atacctcatc caattcgggc aaagccgcac
     3121 ttaacaacac ccaacgcggt atcgcgccca tcgccgccat atctgaaata ttgacggcca
     3181 aaaccttcca agccaagtcc tcaggtttga catcggcaaa aaaatgcctg tccttcaaaa
     3241 gcatatccgc actgaaacac aaatcgaagc cttcacgcgg gcggacaatc gccgcatcgt
     3301 cgcctatgcc caatacgaca tccttatccg tgcctgtttg caaataccgt ttgatgaagt
     3361 caaattcttt catatcccaa aatatccggc gggcgaatcc aatttaaatc atagcaaggc
     3421 agcaaaggcc gtacaaacaa taaagcggct cattcagtgt ttcagcgtat ttcactttta
     3481 gctttggcca taccgtaccc gtatgcaccg accaccctgt ttcaacacac aaacggcata
     3541 tcaaagcacc gcactgcacg ccaccccgaa tgcaaagcgg caacttccgc caccgattag
     3601 gctcaatcgc tgcaactgac ggggtttcaa ccgaaaaggg ctgatgataa aaccatatcc
     3661 ggcatacagt gccgcacaca tctggcacga ttccatccat ttcccaatga aggggaaagg
     3721 cgtgaatttg tatgaattat ccctttcagg gcttgataca gaaaggattc cctttctatg
     3781 ggcaaaccca catcctaccg ccttaaaatc agagtttcaa ccgatatagt ggattaaatt
     3841 taaaccagta cagcgttgcc tcaccttagc tcaaagagaa cgattctcta aggtgctgaa
     3901 gcaccaagtg aatcggttcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg
     3961 atttttgtta atccactata aagcgcggca atgggacaca aacctgaatc tgaatccgaa
     4021 cctgcacccc gattctgacg atagccgttt cagaaaacca cccaaaaaaa caaaccccgc
     4081 aaaagcgggg gtttgtttca catcatcgat gccgaccgac gtttcacgaa tattgcaaca
     4141 gtacctggta caaaatccac taacctcatg catcggcaag atattgccta gccttagtgt
     4201 tggtgatgat tgtgtgccgg cacaacctga cgggttacga tgctgcggat tttcacatcc
     4261 acacggcggt caggttcgat acatgcaatc agagcctcac gttttttggc tttagagact
     4321 ttcgcaccca gtttggcaac ttcggcttca caaacttgag tcatttgcgc ttgagattcg
     4381 cccaagccga cagcagaaat tctagaaaca ggtacgccgt tgctgaccag gttgtttgcc
     4441 actacgtatg cgcggcgttc ggacagggcc tgattgtatt tgtcagaacc cataaagtcg
     4501 gtatggcctt cgacgcggac agattggata ttggtttgac ccaggcgttg cgccaatact
     4561 ttcaggttgt cttgagcttc ggcgcgcaat gaatccttat cgaaaccgaa cagggttttg
     4621 gcagacaggg aaatggtttc atcaacatat tgcggagcct gctccacaac gacgacagga
     4681 gcgggttcgg gttctggctc gggttcgggg gcagcaaccg catcgccgca ttctacgcga
     4741 ccttggcttg ctttatcaaa gtaggcgttt ttccagcatt cgccatagtt gttgcgtacg
     4801 atttcgttcg actggccgct tacggtgtaa ccctgaacgg acgcctcgcc cgcaacagca
     4861 gtgccggaag cgagcaatgc aacgaataat gcgcttaatt tcagctgttt ggtcatttta
     4921 ttccctcatt aaatttgtac agcagataca gaagcaactg ctgaattgcc aacatacagg
     4981 ccgctgtaga aacatggcgg caaatcggat atttcagtct ccactataaa gaagcagggg
     5041 gaggactgtc aatactcaac gcctgaaaac aaccgtaaaa cagcctgttt cctgatagtc
     5101 tatcatgccg aaaaatcaat tccgtgtcat tactttaggg ggattttttc catatcgcac
     5161 gattgccgtt gcacaaaaac aacaaacaca acggcaaagc cccataccgt accggcaaga
     5221 aaatatgata aattataaac aatgttcagc cacccgacac agacccacac cgacccgcca
     5281 tgaaattaca acaattgaaa tacgccttag aagtttacca gcacaacctg aacgtttccg
     5341 aagcggccga agccttgttt acttcgcaac ccggcatctc caaacaaatc aaattgctgg
     5401 aagaagaaat cggcattcag atttttatcc gcagcggcaa gcgcgtggtt tcggtctcgc
     5461 agccgggcaa ggtggttttg gatattgcgg aacgtatttt acgcgatgta cagaacatta
     5521 aaaatatcgg cagcgagttt accggacagg acagcggttc gctgacggtt gccacgacgc
     5581 atactcaggc acgctatgcc ctacccttga ttgttgccga ttttgtgaaa cgctatccga
     5641 aagtcaacct gaccatcaaa caggggagcc ctgccgccat cgcacgtatg gttacctcag
     5701 gcgaggcgga cttggcgatt gttacggaac ggatagacga ccatcccgaa ctgggaaaac
     5761 ttccctgcta tgactggact catgcggtta tcgtaccgaa cgaccacccc ttgctcgaat
     5821 gcagaaaccc cctccgcatt gaagatttgg cgaggtttcc gctgattact tatgaatttg
     5881 cattcaatgc gggcagcagc atcgcgcggg cattttccaa agcccgtttg gaacagccgg
     5941 atgtcgcatt ggcggcggcg gatacggacg tattgaagac ttatgtgcgc ttgggtttgg
     6001 gcgtgggact gatggcgaaa atggcgtaca acccggatac ggacggcgat ttgcagcttg
     6061 tggatgcggc acacctgttc gagccgtcgc cgacgtggat tgctttgcgc agcgatactt
     6121 atttgcgcgg atatgcctac gactttatcc aagcgtttgc gccgcacctg acacgcgaga
     6181 aggtggatag gattctgtac acgcccatca gcgaggattt ttcgatttag gcggctgccg
     6241 gttttcagac ggcactttgc ggcagataca acaaacagga cagatgtttt cgtctgccct
     6301 gtgtttattg agaatgccgt ctgaaatgtt cgtacgggtt aatcaaatgg cgtgcgaaca
     6361 accggatacc atcttcttca acacctgcag attgaggatc ttgatgtgtt tgtgttcgac
     6421 ggaaatcaat ccttcctgat gaaatttaga taatgtgcgg ctgacggttt caagtttcag
     6481 cccgagataa ctgccgattt cttcgcggga cattcttaag atgaagtcgt tggcagcaaa
     6541 acctcgggaa taaaggcgtt gggaaaggtt caacagaaag gcggcaatcc gctcttcggc
     6601 gcgcatattg cccaacagca gcataacacc ttggtcgcgc acgatttcac gactcatcat
     6661 gcggaaaaag taggtacgca ggctggggat attctgcccc agttcttcga tgtgggtaaa
     6721 cggcagttcg cacacttcgc tgtcttccaa ggcgaccgcg tcgcaactgt gcacatggga
     6781 acagatgccg tccatgccga tgagttcgcc cgacataaag aaacccgtta cctgatcgcg
     6841 gccgtcctga ctggcgacgg ttgttttgaa gaagcccgaa cggatggcaa agagcgaggt
     6901 aaaggcttcg ccgacacaga acaggtattc gccctttttc aggcggcggc tttgacggat
     6961 gacggcatcg agttggctga gctcgttggg cagcagcccg acaggcaggc agagttcccg
     7021 caaagaacag gaagaacaca gcgttttcat ctgatgtgta gtattatgcg aagccatacc
     7081 gtaccttttt gtgcgctttg ccccatcatg attatagtgg attaaattta aaccagtacg
     7141 gcgttgcctc gccttgtcct tatttaaatt taatccacta tatgtgctta ttgacacata
     7201 tcaagacagg tttatcatac tgtggcattc taccaaacta tccaaaattt gactaacatc
     7261 ataaaatcgc acacacacac catgaaaatc attcagatac agaacaatca caatgtaaac
     7321 gatgaccgcc ccgagtttga ccgcgcgctg attgccagcc tgcccgccag cggcccgcgc
     7381 tacacttcct accctaccgc cgaccgtttc catgacggtt tccgcgaagg cgaatatatc
     7441 aaagctttac atttgcgcgg tatgggcgcg ttaaacaaac cgctttccct ttacattcac
     7501 attccgttct gcaacaccat ctgctactac tgcggctgca acaaaatcat caccaaagac
     7561 aaaagccgcg ccgatgccta catcgaatat cttgaaaaag aaatggaact gctcgctcca
     7621 catctgaacg gacggcacca gcttgcccaa ctgcacttcg gcggcggcac gccgaccttt
     7681 ttgagcgacg aacagatcga acgtgtcttc cgcatgatac gcaaacattt cgagttaatc
     7741 cccaccggcg aatactccat cgaaatcgac ccgcgcaaag tcagccgcga caccgtcctc
     7801 atgctcggca gactcggctt caaccgcatg agcatcggca ttcaggattt cgaccccaaa
     7861 gtgcaggcgg cggtcaaccg catccaaagt tacgaagaaa ccaaagaagt catcgatgcg
     7921 gcgcgcgaag cggggttcaa atccgtcagc gtcgatttga tttacggcct gccgcaccag
     7981 acttcggaaa gcatcaaaac caccatcgat accgttttgt cgctcgatcc cgaccgcctc
     8041 gccctttatc actacgccca cctgccgcac gtgttcaaac cgcaacgccg catcgatacc
     8101 gccgccgttc ccgacagcga agagaagctc gatatgctgc aatactgcgt ccaaacccta
     8161 accgaacgcg gctacgtctt catcggcatg gatcatttcg ccaaacctga cgacgaactc
     8221 tccatcgccc tcaaagaagg cttcctccag cgcaacttcc aaggctattc gacctacgcg
     8281 gattgcgatt tggtcgccat cggcgtgtcg tccatcggca aaatcggcag cacctattcc
     8341 caaaacgaac gcgacatcga tgcctactat gccgccatcg acgaaggcag actgcccatc
     8401 atgcgcggtt atcagctcaa tcaggacgac atcctgcgcc gcaacatcat tcaggatttg
     8461 atgtgccgtt tcgcgctcga ctaccggatt tacgaaagta tgttcggcat cccgttcgac
     8521 cgctacttca aagacgaact ggcggatttg gaaaaactcg ccggtttggg attggtgcgc
     8581 ctgaacagcc acgggctgac cgttaccccg aaaggacgct tcctcatccg caacatcgcc
     8641 atggtgttcg attaccacct gcgccataaa gaaaccaagg cgaaatattc gcaaacggtg
     8701 tgattgcgtc taacgtacaa atgccgtctg aaaggctttt tcagacggca ttttgctgcc
     8761 ggcaggataa gtgttttcaa gaacaggcgg cggcatatca taacgttccg cacctttgtg
     8821 tccgaccgtt ccgaaaccaa gatatagtgg attaacaaaa accagtacag cgttgcctcg
     8881 ccttgccgta ctagctgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc
     8941 actataccaa acggcatatc ccgacagaac agattgtgca taaggcacaa gcccgcacat
     9001 tccatcaaca aaatgccgtc tgaacacggg ttcagacggc atcagtattt tacaatcaga
     9061 atactgcctg taaaaccaag tagcagacaa ccgacaatac ggcggcggca ggcagggtaa
     9121 tgacccacgc caaaccgatg ggcttcatca gtttccagtt ggcattgcgg ttgaccagac
     9181 cgatgccgag taccgcgccg accaagatat gcgtactgga cacgggcagc cccatcagcg
     9241 acgcgcccat cacgacggat gcggcggaca attcggcggt aaaacccgag gcggggtgca
     9301 tttcggccaa actcgtaccg acggttttaa tcacctcttt accgacaaac cacaaaccga
     9361 caatcagcgc gatgccgaaa gtcagcatcg caatcggggg gacgacattt tgcgcggcaa
     9421 cgctgttggt acgcaaaaca tccataatcg cggcaaacgg accgatggcg ttggcgatat
     9481 cgttcgcacc gtggctgaat gcgaagccgc aggcggtaaa gacctgcatc catgaaaaca
     9541 tctgaaaggt cgatttgccc aagtctttac gcttgaggct tttggcaaac acaaacgtcc
     9601 ccatccacac cgccgcgcct atcataaaga tggtcaggaa gctgttgacg ttgctcatcc
     9661 ccaaatgcag gtttttcaag cccttgaaaa tcagcatagc ggaaatcatc atcgcgccga
     9721 acgaagcgat aaagggaatc caagaatgca gcgctttgta ggaatcgaca ttgtttttac
     9781 ggttgtcgaa cgcataaaga ccgcggtaat actccgattg cagctcttgc ggatcgaatt
     9841 cgggttcgtc gtaaatttgc gcgtcgtgcg ccattttggt ggcgtactcg actttttcgg
     9901 cttcggacaa accctcgaaa aacaggcggt gccgttcttt ataggccttt ttttcctgct
     9961 tgatgccctt gagcgtgcct tccgcccaag cgttgtaatc taagacgttt ttcttgacgc
    10021 gcgaaaacag gaaataggac accgcgccgc ccaacacggg cgacaatacc caagaaacac
    10081 caataccgcc cagcttgccc caacgtatca aatcgcccga tgcggcatcg ttcattaccg
    10141 ccatacatac cgcgctgccg acaatgccgc cgataatgga atgggtggta gataccggaa
    10201 gccctttttt cgaggcaaac aacagccaca acgccgccgc caaaagcgcg gacatcataa
    10261 taaacacaaa ctgtatgggt tcgaaatcaa cacccttcaa atcgacgatg cctttgcgta
    10321 tggtattggt tacctcgccg cccgcgatga ccgcgccgct gacctcaaat accgccgcaa
    10381 tcagcaaagc ctgcgggatg gtcagcgtac ccgcaccgac gctggtgccg aaagaattgg
    10441 caacatcgtt gccgccgatg ttgaacgcca taaacacgcc gaacatcgtg gcaataatga
    10501 ataaggcggc gtaattgtaa tgggtataac ccaagcccca ataaataaaa tagccgactg
    10561 tacctaccag catggcggca aagacggcgt tgatggtttt aacatttgcg ctcatttgga
    10621 tttgagccat ggcaatcttc ctttaatgtg gtggaaatca tgagtgttgc cgacactgta
    10681 ctgctgcctc cggtcgaact gccgtttcgg gatatggcag acgcatcctt ccttctgaac
    10741 cgcatccgaa tacccccaaa cctgaccgaa tgcaaaactg ctgccggaaa cggtttgtat
    10801 gacacttcta ctactggatg ttgcgggcgc attataatat ttttccatcc gtcttgaaac
    10861 atttatttac actttattta cactgcggcg gcaaatcggt atacgagcgt caatacacgt
    10921 taaaatggcg ttttgcacca gtttgggagt gatgatggaa acacagcttt acatcggcat
    10981 catgtcggga accagtatgg atggggcgga tgccgtgctg gtacggatgg acggcggcaa
    11041 atggctgggc gcggaagggc acgcctttac cccctatccc gacaggctgc gccgccaatt
    11101 gctggatttg caggacacag gcacagacga actgcaccgc agcaggattt tgtcgcaaga
    11161 actcagccgc ctatatgcgc aaaccgccgc cgaactgctg tgcagtcaaa acctcgcgcc
    11221 gtccgacatt accgccctcg gctgccacgg gcaaaccgtc cgacatgcac cggaacacgg
    11281 ttacagcata cagcttgccg atttgccgct gctggcggaa ctgactcaga tttttaccgt
    11341 cggcgacttc cgcagccgcg accttgcggc cggcggacaa ggtgcgccgc tcgtccccgc
    11401 ctttcacaaa gccctgttcc gcgatgacaa agaaacacgc gcggtactga acatcggcgg
    11461 gattgccaac atcagcgtac tcccctccga cgcacccgcc ttcggcttcg acacagggcc
    11521 gggcaatatg ctgatggacg cgtggacgca ggcacactgg cagcttcctt acgacaaaaa
    11581 cggtgcaaag gcggcacaag gcaacatatt gccgcaactg ctcgacaggc tgctcgccca
    11641 cccgtatttc gcacgacccc accccaaaag cacggggcgc gaactgtttg ccctaaattg
    11701 gctcgaaacc taccttggcg gcggcgaaaa ccgatacgac gtattgcgga cgctttcccg
    11761 ttttaccgcg caaaccgttt tcgacgccgt ctcacacgca gcggcaaatg cccgtcaaat
    11821 gtacatttgc ggcggcggta tccgcaatcc tgttttaatg gcggatttgg cggaatgttt
    11881 cggcacacgc gtttccctgc acagcaccgc cgacctgaac ctcgatccgc aatgggtgga
    11941 agccgccgca tttgcgtggt tggcggcgtg ttggattaat cgcattcccg gtagtccgca
    12001 caaagcaacc ggcgcatcca aaccgtgtat tctgggcgcg ggatattatt attgagcgca
    12061 aataccgtct gaaagccatt tccgccgctc agacggcatt ttttcctctt tcgtttacaa
    12121 acccttaaaa tccatttaca ctcaaactcg ttcaaaacaa aacaaaccct gccatgaaaa
    12181 ccctgctcct cctcatcccc ctcgtcctaa ccgcctgcgg cacactgacc ggcatacccg
    12241 cccacggcgg cggcaaacgc tttgccgtcg aacaagaact cgtcgccgca tcgtcccgcg
    12301 ccgccgtcaa agaaatggat ttgtccgccc tgaaaggacg caaagccgcc ctttacgtct
    12361 ccgttatggg cgaccaaggt tcgggcaaca taagcggcgg acgctactct atcgacgcac
    12421 tgatacgcgg tggctaccac aacaaccccg aaagtgccac ccaatacagc taccccgcct
    12481 acgacactac cgccaccacc aaatccgacg cgctctccag cgtaaccact tccacatcgc
    12541 ttttgaacgc ccccgccgcc gccctgacta gaaacagcgg acgcaaaggc gaacgctccg
    12601 ccggactgtc cgtcaacggc atgggcgact accgcaacga aaccctgctc gccaaccccc
    12661 gcgacgtttc cttcctgacc aacctcatcc aaaccgtctt ctacctgcgc ggcatcgaag
    12721 tcgtaccgcc cgaatacgcc gacaccgacg tattcgtaac cgtcgacgta ttcggcaccg
    12781 tccgcagccg taccgaactg cacctctaca acgccgaaac ccttaaagcc caaaccaagc
    12841 tcgaatattt cgccgtcgac cgcgacagcc ggaaactgct gattgcccct aaaaccgccg
    12901 cctacgaatc ccaataccaa gaacaatacg ccctttggac cggcccttac aaagtcagca
    12961 aaaccgtcaa agcctcagac cgcctgatgg tcgatttctc cgacatcacc ccctacggcg
    13021 acacaaccgc ccaaaaccgt cccgacttca aacaaaacaa cggtaaaaac cccgatgtcg
    13081 gcaacgaagt catccgccgc cgcaaaggag gataaaccgt gaaaccgctg cgcagactga
    13141 caaacctcct tgccgcctgc gccgtagcgg tcgccgcctt cggacagccc gccctcgcgg
    13201 cggacttggc gcaagacccg ttcattaccg ataacgccca acggcagcac tacgaacccg
    13261 gcggcaaata ccacctcttc ggcgacccgc gcggcagcgt ttccgaccgc accggcaaaa
    13321 tcaacgtcat ccaagactat acccaccaga tgggcaacct gctcatccaa caggcaaaca
    13381 tcaacggcac aatcggctac cacacccgct tttccggaca cggacacgaa gaacacgccc
    13441 ccttcgacaa ccacgccgcc gacagcgcaa gcaaagaaca aggcaacgtt gacgaaggct
    13501 ttaccgtgta ccggctcaac tgggaaggac acgagcacca tcccgccgat gcctacgacg
    13561 gcccgaaggg cggcaattac cccaaaccta cgggcgcacg cgacgaatac acctatcacg
    13621 tcaacggcac agcacgcagc atcaaactca atccgaccga cacccgcagc atccggcaac
    13681 gcatatccga caactacaac aacctcggca gcaatttctc cgaccgcgcc gatgaagcca
    13741 acagaaaaat gttcgagcac aatgccaagc tcgaccgctg gggcaacagc atggagttta
    13801 tcaacggcgt cgccgccggc gcgcttaacc cctttatcag cgcgggcgaa gccgttgacc
    13861 agtggatgca ggaaaacccc aatgccgccg aaaccgtcga aaccctggtc aacgtcctgc
    13921 cgtttgccaa agtcaaaaac ctgacaaagg cggcaaaacc ggggaaggct gcggttagtg
    13981 gggatttctc agactcctac aagcataaca ctgcttcaag attatctcag tctgtagatg
    14041 gagaaatgtt tcaaacccgc aatgttgatt ttaaagcaaa atctattggg actaaaattc
    14101 atgatggagc tcaagggaaa catatttcag gacatagaaa ctacattgaa ggtaagagta
    14161 ctttaaatca aaacattaat cctcaagaat tgttgaacgg aatacattca ggtgcttatc
    14221 cagttatttc taaaggagca agaggaaatc ctgttgttga ttttgggtat cctataggca
    14281 gcgatgggaa atcaggatta agtaccaatt ttggtacgat tcattcaggt aaaaatggag
    14341 ttcacattgt tccggctaac cctaaaacca ttaaaaaggt gcaatagtta tgaatatatt
    14401 accaagctgg ctgcgagtcg gtatgaatat agcaatgctg ggcatgatac actcagatat
    14461 caggttaatt accgtagatt acgaggaagg aagaaggttt ttaaaaatca aaaattattt
    14521 atcaagagaa gccatcacag aagaccatga agatatggaa tatttgatta cagagttatg
    14581 gtctatgtgt ggagaatatt ttgatgaagc tgactttgaa tgtatttatt ctaatcattc
    14641 ttctatggag ttaaaccaaa taaatggtgc agtattcagg agaaaggaat taatttcgca
    14701 agcgtaggtt aaaaaaccaa caatcacaat gtcttctgaa accgtgttta attttcagac
    14761 ggcatttcct tcatttgaaa taggatattg agaactgagt tcttcaaaaa tcctacacct
    14821 gctccttcca cggcagcacc ttggtcaaaa cggcagacgg ctacaaagcc attgcccgta
    14881 tccgaaccgg cgaccgcgtc ttctccaagg acgaggcaag cggaaaaacg ggatacaaac
    14941 ccgttaccgc ccgatacggc aatccgtatc aagaaaccgt ttacattaaa gtttcagacg
    15001 gcatcggcaa cagccaaacc ctgatttcca accgcatcca tccgttttat tcgggcggca
    15061 aatggattaa agcggaagat ttgaaagcgg gaagcaggct gttatccgaa agtggcaaaa
    15121 cccaaaccgt ccgcaacatc gttgtcaaac caacaccgct caaagcctac aatctgaccg
    15181 ttgccgactg gcatacttac ttcgtcaagg gcagtcaggc ggaaacggaa ggggtttggg
    15241 ttcataattc ttgtccgcct aaaagaacag gaagctccaa gaatgaaaaa catggagacg
    15301 gcggtcgaag tcaaatatca gcggaatcaa gaattgctga attaaaaaat aaaattattc
    15361 ccggaatgcc caaaaatgaa cgcttaaaga ttgagaaaac aatcaaaaat attacaaaaa
    15421 atgccaatcg aaaagcaaaa ggagaagagc atggtcgacg cggtcgttaa aactcccgaa
    15481 tttttacctt ttacttctgt aggaatattc cgttttggtg cggatataac acagtacaaa
    15541 aacatactgg gaacttttat gtatgaacct cctgatgagt ttagaacaga atattatgaa
    15601 tctcccgact caaatttact aattgccgtc aagaaaaaca aaattatttc gatattttgt
    15661 tatcaggagc tatattttat gggcgttaat ataataggtc tgaattttga agattttaaa
    15721 cagcttttcc atcaccctaa atcatacggt gttgataaat attatttatc aaatgaatct
    15781 tatccgacat atgtctatga gtttgatgaa ataggagtac aagcttggga agcaaaaggg
    15841 aaaattgtta ctatcattgc cgggggcaaa gacaattatt cgacagaacc ttactacgat
    15901 gaataacatt aatggcaggc ataggttggg ttgagaactc aacaacaaaa ggtcgtctga
    15961 aaccgtaatc gatttttcag acgacctttc tgtcaatcca aacagattgt cgaatcttaa
    16021 tccaacctgt gcttgctgta cggaacaggc acggtgttca ttcacaagtt aagtcatata
    16081 ttgaatcaaa aggcggcatt gttaaaacag gtttaggaga ttaaacatgg catcatatgt
    16141 ttccataaaa ggatggattg aatgctctga cgatgatata aaaatcatcc aagaaaacat
    16201 taataatttt tggaataatt gtcccttcaa tatcgaagag aaagaatctg caaaaatata
    16261 taaaagcggg tgggttttcc cgacaaatag ttttaattgg agcagctata ttttttttgg
    16321 tgcatgcgta aaatcttatt tcattattta ttttgaaaaa tgcattaaaa caataatgga
    16381 attggatatt gaaatatcag gtttttttga attagattat tatgaagata gttataaagt
    16441 acattggaaa ataaataatg gaaatttgat acaaacgact aattaaatgg acaaatataa
    16501 gttagattgg acacccaaac ctaaaaactg tctgaaactc aatttggttt tcagtaagcg
    16561 taggttggct taaaaaccca accaccaaaa tgccgtctga agcggtattc agctttcaga
    16621 cggcattttg atgaatgaaa caggatattg agaactaagt tctttaaaaa tcctacacct
    16681 gctccttcca cggcagcacc ttggtcaaaa cggcagacgg ctacaaagcc attgcccgta
    16741 tccgagtcgg cgaccgcgtc tttgccaagg acgaggcaag cggaaaaaca ggatacaaac
    16801 ccgttaccac ccgatacggc aatccgtacc aggaaaccgt ttacattgaa atttcagacg
    16861 gcatcggcaa caaccaaacc ctgatttcca acagcatcca tccgttttac agtcaaggaa
    16921 aatggataca ggcaggtcgt ctgaaaaaag gcgacaccct gctttccgaa agcggtgcaa
    16981 aacagacggt tcaaaacatt accctcaaac agcagccgct caaagcctac aatctgaccg
    17041 ttgccgattg gcatacttac ttcgtcaagg gtgatagggc ggaaacggaa ggggtttggg
    17101 ttcataatga ttgtccgtat ggtagttcta gcgcaaaagg taaaagtggc agtgagagaa
    17161 atactgctaa acgtggaacc ttcagacaag aaacgctaaa aaatgcatgg gatttggcag
    17221 cagatggtag ccagcctaat tcaaaaaaat gtcctacatg tggtaaagat gtatatggta
    17281 atccccataa caaggagaaa cgtaatacaa aagatggttg ggatggaagt cataatccat
    17341 catggagtaa ccgtcaacat agttctgatc gtaaggagca actaaatgat tataataaag
    17401 gagtaagttt agaatgcaga cattgcaatc gatctggtgg caacaaggat gaaaggttta
    17461 agaaaaaatg attacagtcg aacatttaga gcattatttg ggtgaaatcg aaagcggtat
    17521 aaaatgcttg gatcgacgtt atcatctcag cgtttccgtc ttcccatcac aaccatataa
    17581 aggggtaact actttttcta ctttaggctt gaatcgatat gacttgaact ataaaagtag
    17641 gtttgaatta atttttacct gttctgaaga atggaataaa gaaaatattg cagcttttct
    17701 atcaggagtg gctgaatatt tgattgacaa tagacaacct attttaagag gtgaaattat
    17761 tcgattacct agggtaatta tcgaaggtag caaaatggac gctctgtatg tttccgcccc
    17821 attttatttc gatgatgatt ttcaggtctg ttatggcgga cactacaata ctgtttttcc
    17881 tttgcttgtc ccgttgtata aacaggaagc agaattggtg gaaaaaaagg gttggaatgc
    17941 ttttgagcag ttcttgctgg ataatgaagt tgacaacctt tcggatatga ataggaaacc
    18001 gtttgtttgg taaaggattt tcttaaattt gattaaaggt cgtctgaaat taagcttgtt
    18061 tttcagacga cctttccttc atttgaaaca gaatattgag aactgagttc ttcaaaaatc
    18121 ctacacctgc tccttccacg gcagcacctt ggtcaaaacg gcagacggct acaaagccat
    18181 tgcccatatt caagccggcg accgcgtctt cgccaaagat gaaaccagtg gaaaaactgg
    18241 atacaaacct gttaccgccc gatacggcaa tccgtaccag gaaaccgttt acattgaaat
    18301 ttcagacggc atcggtaaca gccaaaccct aatttccaac cgcatccatc cgttttacag
    18361 tcaaggaaaa tggatacagg caggtcgtct gaaaaaaggc gacaccctgc tttccgaaag
    18421 cggtgcaaaa cagacagttc aaaacattac cctcaaacag cagccgctca aagcctacaa
    18481 tctgaccgtt gccgattggc atacttactt cgttaagggt aatcaggcgg aaacggaagg
    18541 ggtttgggtt cataatgcgt gtccgatcaa accaaaacca accaatcatg cccaacaaag
    18601 aaaagaagaa gctaaaaacg attctcatcg aagtgtggga gattccaatc gtgtcgttcg
    18661 cgaaggaaag caatatttag attccgacac aggaaaccat gtttatgtaa aaggagataa
    18721 agtggttatt ctaactcctg atggaagaca ggtaactcaa tttaagaact cgaaagccaa
    18781 tacgtcaaaa agggtaaaaa atgggaaatg gacaccaaaa taatcgatct cccttagaaa
    18841 aaagaatttt ttatctggag cattcggggc agtatctgat gatttgcgcc ctatcagatt
    18901 actcccaaaa taaacatact gtcgttatgg cgaattttct ctatccaaat gaaaaaatgg
    18961 attggagaaa tttagatgat ttgttcaatg agttggtttt agaggaatta cagtcttcat
    19021 ttatggattg gtatccgact attgaagagg caattagcca tcatttagaa gacttttcgt
    19081 aacaagcata aattaaaggt tgtctgaaac tatgttcgat tttcgacgac attttcctca
    19141 ttggaggggg cggcaattta tggaaaatag atttgaaaaa atcgttaagg atatttttag
    19201 ttttacccaa tttgttccga agcagaaaat gagattccca ccccatcctc ccgttatgac
    19261 gactgttggt gggaattgga aatcttgaat gcctctgcat ttgaattagt caaaaaattg
    19321 aatcaaagca aacaagagta acaagctgca gcctgcatag gggtttttaa agtacggcag
    19381 caaccgtaga ttaaattaaa aatcaaacaa tcaaagctcg tctgatataa tcgatatatt
    19441 ctgttaaacg aaaaataaat atgtttaaaa aattcaaacc ggtactgttg tcattttttg
    19501 cacttgtatt tgccttttgg ctggggacgg gtattgccta tgagattaat ccgcgttggt
    19561 ttttgagcga tacggcaact gaaatacctg aaaatacgaa tgcttttgtg gcgaaacttg
    19621 cccgcctgtt ccgaaatgcc gacagggcgg ttgtcatcgt gaaggaatcg atgaggacgg
    19681 aggaaagtct tgccggaact gtggatgacg gtccgttgca gtcggagaag gattatctcg
    19741 cgctcgctat ccggctcagt cgtttgaaag aaaaggcgaa atggtttcac gtaacggagc
    19801 aggaacatgg ggaagaggtt tggctggatt actatatcgg cgagggcggt ttggttgcgg
    19861 tttcgctttc gcaacgctcg ccggaagcgt ttgttaatgc cgaatatctg tatcggaacg
    19921 atcgtccgtt ttctgtaaat gtgtacggcg gaacggctca cggagaaaat tatgaaacga
    19981 caggagaata tcgggttgtt tggcaaccgg acggttcggt atttgatgcg tcgggatacg
    20041 ggaaaatcgg ggaagatgtt tatgagcatt gcctcgggtg ttatcagatg gcccaggtat
    20101 atttggcgaa ataccgggat gtcgcgaatg atgagcagaa ggtttgggac ttccgcgaag
    20161 agagcaaccg gattgcgtcg gactcgcgcg attctgtgtt ttatcagaat atgcgggaat
    20221 tgatgacccg ggggatgaag gcgaacagtc ttgtggtcgg ctatgatgcg gacggtctgc
    20281 cgcaaaaagt ctattggagt ttcgacaatg ggaaaaaacg ccagagtttc gaatattatt
    20341 tgaaaaacgg aaatcttttt attgcacaat cttcgacggt agcattgaaa gcggatggcg
    20401 taacggcgga tatacagacc tatcatgcgc aacagacgtg gtatttggat ggcgggcgga
    20461 ttgtccgcga agagaaacag ggagacagac tgcctgattt tcctttgaac ttggaagatt
    20521 tggacaaaga agtgcgccgt tatgcggagg ctgcggcgag acgttcgggc ggcaggcgcg
    20581 acctttctca ctgaacgcaa atgccgtctg aaaccggttt tcagacggca ttggagagtc
    20641 aaacgctttt tgcaataccg tatatgccga atccgattcg ctacaaattg aaaaccacaa
    20701 tccaaaaaac ggaaatacac attaaacggg cctttttacc gaccgtatca tcccataggt
    20761 tttccacacc ttttttcatc cataaattca aaccatttaa gtttgtatcc ttaccgacaa
    20821 ttgcagcagc atcatccgca taacggtcac ccaaattagc caaataacgc caaccgccat
    20881 aggtatcgcc acggaaagca taaccacgca aggtttggat ttgttctggt gttaaaacaa
    20941 cttcaccctc attcataata agatccttta aattattttt tacttgaatt gtttacaaaa
    21001 ctctgtacca attgctctac ttgttggtga taacctacca actcctgctg tgtgagctgc
    21061 tgcttttccc gaataaacgg gtaatactgt accgtgaaac cgttaataca ggaacctacg
    21121 ctagtgctat aattatcttc ttcagcctgg tttactcgat tattccaatg agtaataatc
    21181 gccggatttt ctcctttttt aatatagtaa aattcatgaa aatatggatt ttcaggaata
    21241 tgtcttttat cttcataagc ttcatattca ggataggcag atggcatttt tttaaccccg
    21301 taagtaagca atctttctcc catagtcgta cttaaactac acgcatcttt tcggataaca
    21361 atatcgtcca cgctatccaa accatcgcgt agaaattgga taaagtgtgc tttgttttgc
    21421 tggttgtatg gctcaagaac ccagccttgg tcggtttttt tgtaatagac gctaatctct
    21481 atcaaattaa tggagtaagc atcctgcccg ggcgtgtcgg aaagccattt tgtggcattg
    21541 tcttgcgtat accgtgcaag atagccataa gggataacca ttttggtgcc ctgaaaatca
    21601 aatgtaaccg tatgttcaaa tcctgtcatt ggctcgggat tgttgaaact ggtttgttca
    21661 ttaacaggtt cacatgaggt catagtaaaa acactcccaa taaacaaaat aaaaagttga
    21721 taaatggtag tagcatatgg tctcataatt tcaagcctag aaattagtta aagaatatat
    21781 tatggtagat actaactctt taagttgaca tattgtgcga tgtcgagggc tgtaccatat
    21841 tttcccatcg tattttcccg ttctttatat gagcggcagg catcctcata aaagaaggga
    21901 taccgatacg gaaaaatacc ccggcataaa aaatatactg attaatcaat acaaatccaa
    21961 caaacagttc atcgtattct tttctgttgg cgtataaaaa atactgatat atgccttcac
    22021 tttcataggg cgacgcttta tgtaccgtcc tgtgtgttga aacgtcggtt ttccttaccg
    22081 cctgccccgc ttttccctga ttgctgccaa ctgccgtccg aacctgaacc gtcaggtttc
    22141 agacggcatt ttttccgcct gttcccacaa tttccgtttt tgtgcggcgg tcagtttttt
    22201 gacggcgatt tcctgtttga gcgccgtgcc tttatccatc ccgcctgcaa cgatacgcat
    22261 cgccaccggt ttgaatacgc gggtatattt cgcgccttta ccggttgtgt gggcggcaag
    22321 ccgctgttgc ggattcgggc tgatgccgca atagaacgcg ctgttttcac acaatatcag
    22381 gtaaacgctc cagtttgacg cgttcatctg cctgcatcct gagttttttc cccgttccaa
    22441 ggcgcaactt tcagcagcag cagcataccc ggcagggcaa gtatgaaaca cagctggaaa
    22501 aacggtacat aaccgagcca ttcgatcaga taaccggcaa aggaattgat gaccgtgcgc
    22561 gggacggcgg acaggctggt aaacagcgca agctgcgttg cggtaaatgc gggattggtt
    22621 tcacgcgcca tatacgatac gaacgccgcc gtccccaacc ccacgccgac cgcttccgcg
    22681 ccgataactg ccgccagcat cagcctctcg cctgtgccga ccgtgtcgaa aggtccgaac
    22741 cctgccagcc atacaaaccc caaaacggtt acagcctgca ccgcgccgaa tagccacaag
    22801 gctttgttta cgccgatttt cagcatccac acgccgccca agatacctgc cgccactgcc
    22861 ggccacagtc ctgcattttt tgcaatcaaa ccgatgtctg tcttactgaa acccatatcc
    22921 agataaaacg gcgttgccaa cgcggttgcc atactgtcgc cgagtttgta aaggaagata
    22981 aacagcagca cgcacaccgc cgaagcgatg cccttgcgcg taaaaaattc tttaaacggc
    23041 tctaccacgg tctgcttcaa cgttttagga acggcaggcg gcaacacggg ttcgcgcgca
    23101 agaaacagcg tcatcagaag accgggcagc ataaacagcg aagtgatgac aaacacctcc
    23161 ggccacggca tcctgtctgc cagcaccaaa ctcaatgaac cgggaatcag ggcggcaacc
    23221 cgataggcgt tcacatgaac cgagttgccc aaacccaatt cctcatccga caaaatctcg
    23281 cgcctgaacg catccaatac aatgtcctga ctggcggaaa aaaaagcgac aagcaccgac
    23341 aagccggcaa tcagcggcag atgattacga gggtttaaaa aggcataagc cgccaaagcc
    23401 gccagcaaac ctgcctgcgt cagcagcatc cacccgcgcc gccgccccaa aacgggcagc
    23461 ctgaccgcgt ccatcagcgg cgaccacaaa aatttccaag taaacggcag accgattaac
    23521 gccatcagcc cgatgctctt caaatccacc tgctcgctgc gtaaccacgc cggaatcagg
    23581 ttaatcagaa agtacagcgg cagccccgag gcaaaccccg taaaaataca gacaagcata
    23641 ttgcgggaaa agatttgccc gataaaacct gatttcgatg cagtcatcgt tcgtgcagcc
    23701 caaaaaaaac aaaagcctat tgtagcaaat atcgcccgcc tgctgaaaaa cgccgccccg
    23761 cgccgccggt ttgccgttca aatgcaaaat gccgtctgaa actgtgttca gacggcattg
    23821 cttttctgaa aaccagacgt gcttacaggc tgtaatacat ttcaaattcc agcgggtgcg
    23881 gcgccatgcg gatgcggcgt acgtcttctt ctttgaaagc gatgtagctg tcgatccagt
    23941 ctttgctgaa cacgccgccg cgcaggagga attcgtggtc ggctttgagg gcggccagtg
    24001 cttcttccaa agaagcgcaa acggtcggca ccaatgcatc ttcttccggc ggcagatcgt
    24061 acaggttttt atcggcaggg tcgcccggat ggattttgtt ttgaatgccg tccaaacccg
    24121 ccatcaacag ggcggcaaat gccaaatacg ggttggcggt cggatcgggg aaacgcgctt
    24181 cgatgcggcg cgccttgctg ctgttcacgg acggaatgcg gatggaagcg gaacggtttt
    24241 tggcggagta tgccagtttg gtcggcgctt caaagtgcgg cacgaggcgt ttgtaggagt
    24301 tggtggacgg attggtaatc gcgttcaagg ctttggcgtg tttgatgatg ccgccgatgt
    24361 agtagagcgc ggtgtcgctc aagccggcat agccgtcgcc tgcgaacagg ttttgaccgt
    24421 ctttccaaat ggattggtga acgtgcatac cgctgccgtt gtcgcccata atgggtttgg
    24481 gcatgaaagt ggcggttttg ccgaagttgt gggcaacgtt ttgaatcaca tatttcatgt
    24541 cttgggtttg gtcggcgcgt ttgaccaaag tagcaaagcg cgtgccgatt tccatttggc
    24601 tgccggtgcc gacttcgctg tggtgcactt ccacttcaat accgagttct tccaaaatgt
    24661 ttaccatcgc cgaacgcaaa tcctgaccgc agtcaatcgg tgcaacaggt gcgtaaccgc
    24721 ctttgacggt cgggcggtgg ccggtgtttt gaccgtccat atgcagaccg cttgcccacg
    24781 cgccgctttc ggacgtgatt tcgtaacggg ttttgtgcat atcggtttca aattctatgc
    24841 cgtcgaatac gaaaaactcg ggttcgggac cgaaataggc ggtctcgccg ataccggaag
    24901 atttcaaata ggcttcggct cggcgggcga tggagcgcgg gtcgcggtcg taaccctgac
    24961 cgtcggcggg atcgataacg tcgcaagtca acacaacagt cgcatcatca taaaaaggat
    25021 cgacgaaggc tgtagacgca tcgggacgca actgcatatc ggaagcctga atgcctttcc
    25081 agccgccgat agacgaaccg tcaaacgcct gaccgttttc gaaccactct tcggggtctt
    25141 ccaacacgat gcgcgcaggc acggtaaagt ggtgctgctt gcctttggta tcggtaaagc
    25201 gcaaatcgac aaagcgggct tcgctttctt caatcaattt tacggcgttt ttaatagaca
    25261 tttttcagct cctggaaaag ggaaatagca aaatatacgg aacgcggcag attagcccaa
    25321 agccagcatg attctaccac gtccatgccg tctgaaactc gccctgcgtc aaatttcaag
    25381 ctggaaaata tagtttcaga cggcaagatt gtcaacaata tgcttcggtt tgtctgttca
    25441 aaagcagaat acccgccctt ttgtccgaat gccgacaaaa cagatg
//
LOCUS       DBBZYD010000018        24349 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.018, whole genome shotgun sequence.
ACCESSION   DBBZYD010000018 DBBZYD010000000
VERSION     DBBZYD010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24349
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.018"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..644
                     /locus_tag="ACJJDL_000620"
     CDS             <1..644
                     /locus_tag="ACJJDL_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7573388.1"
                     /translation="EPTGADKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADY
                     ASYRKWNNNKYSVNTKEVLRNNNGNRKELKTENQENGSFHAVSSLGLSAIYDFKLNDK
                     FDKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSATKPGQIPSLVTKPAYHESH
                     SISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGMRYHF"
     gene            complement(618..827)
                     /locus_tag="ACJJDL_000621"
     CDS             complement(618..827)
                     /locus_tag="ACJJDL_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573389.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKCA
                     GKGLMPSEGSDGIGVGESEVVAHAQ"
     gene            complement(845..1402)
                     /locus_tag="ACJJDL_000622"
     CDS             complement(845..1402)
                     /locus_tag="ACJJDL_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HGG7573390.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(1478..3112)
                     /locus_tag="ACJJDL_000623"
     CDS             complement(1478..3112)
                     /locus_tag="ACJJDL_000623"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HGG7573391.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(3390..4496)
                     /gene="serC"
                     /locus_tag="ACJJDL_000624"
     CDS             complement(3390..4496)
                     /gene="serC"
                     /locus_tag="ACJJDL_000624"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HGG7573392.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGATVVIIRED
                     LLERCPNDIPDVFNYRSHINRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTEDEELDRRFVLEAELQGLCLLKGY
                     KTVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4861..5292
                     /gene="rimP"
                     /locus_tag="ACJJDL_000625"
     CDS             4861..5292
                     /gene="rimP"
                     /locus_tag="ACJJDL_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HGG7573393.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            5320..6822
                     /gene="nusA"
                     /locus_tag="ACJJDL_000626"
     CDS             5320..6822
                     /gene="nusA"
                     /locus_tag="ACJJDL_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HGG7573394.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGVDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6835..9723
                     /gene="infB"
                     /locus_tag="ACJJDL_000627"
     CDS             6835..9723
                     /gene="infB"
                     /locus_tag="ACJJDL_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HGG7573395.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDTAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARTL"
     gene            complement(9934..11328)
                     /locus_tag="ACJJDL_000628"
     CDS             complement(9934..11328)
                     /locus_tag="ACJJDL_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HGG7573396.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLIDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(11402..12742)
                     /locus_tag="ACJJDL_000629"
     CDS             complement(11402..12742)
                     /locus_tag="ACJJDL_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HGG7573397.1"
                     /translation="MLNPSRKLVELIRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKDQ"
     gene            12885..13511
                     /locus_tag="ACJJDL_000630"
     CDS             12885..13511
                     /locus_tag="ACJJDL_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HGG7573398.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYVVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(13575..14993)
                     /locus_tag="ACJJDL_000631"
     CDS             complement(13575..14993)
                     /locus_tag="ACJJDL_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7573399.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAVRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            15320..16048
                     /locus_tag="ACJJDL_000632"
     CDS             15320..16048
                     /locus_tag="ACJJDL_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HGG7573400.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     SNPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(16107..16595)
                     /locus_tag="ACJJDL_000633"
     CDS             complement(16107..16595)
                     /locus_tag="ACJJDL_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HGG7573401.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(17354..17818)
                     /locus_tag="ACJJDL_000634"
     CDS             complement(17354..17818)
                     /locus_tag="ACJJDL_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HGG7573402.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
     gene            complement(17828..17958)
                     /locus_tag="ACJJDL_000635"
                     /pseudo
     CDS             complement(17828..17958)
                     /locus_tag="ACJJDL_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            18143..19201
                     /gene="alr"
                     /locus_tag="ACJJDL_000636"
     CDS             18143..19201
                     /gene="alr"
                     /locus_tag="ACJJDL_000636"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HGG7573403.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(19265..20620)
                     /locus_tag="ACJJDL_000637"
     CDS             complement(19265..20620)
                     /locus_tag="ACJJDL_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HGG7573404.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVKRGGRIPAPVQSMK
                     N"
     gene            complement(20635..20907)
                     /locus_tag="ACJJDL_000638"
     CDS             complement(20635..20907)
                     /locus_tag="ACJJDL_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HGG7573405.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(21033..21770)
                     /locus_tag="ACJJDL_000639"
     CDS             complement(21033..21770)
                     /locus_tag="ACJJDL_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HGG7573406.1"
                     /translation="MKKLSRIVFSIVLLGFSASLSAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAYAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGSKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIHHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(22051..22950)
                     /gene="prmB"
                     /locus_tag="ACJJDL_000640"
     CDS             complement(22051..22950)
                     /gene="prmB"
                     /locus_tag="ACJJDL_000640"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HGG7573407.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            23095..23688
                     /locus_tag="ACJJDL_000641"
     CDS             23095..23688
                     /locus_tag="ACJJDL_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573408.1"
                     /translation="MADGMGNLIGWEKTGLVAGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            23800..>24349
                     /locus_tag="ACJJDL_000642"
     CDS             23800..>24349
                     /locus_tag="ACJJDL_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HGG7573409.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIATAAMKA
                     AIPDYMKFGEGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVAKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKGAEAVNNDTEHNAT
                     YFSHFPSKQKSTGGSRCPFLYRF"
BASE COUNT         6473 a         6595 c         5982 g         5299 t
ORIGIN      
        1 cggaaccaac cggtgcagac aaagacaaaa taagcacagt aagcgattat ttcagaaaca
       61 tccgtgcgca ttccatccac cctcgggtgt cggtcggcta cgatttcggc ggctggagga
      121 tagcggcaga ttatgccagt tacagaaaat ggaacaacaa taaatattcc gtcaacacaa
      181 aagaggtgct aagaaacaat aatggcaaca ggaaagaact gaagacggaa aatcaggaaa
      241 acggcagctt ccacgccgtt tcttctctcg gcttatccgc catttacgat ttcaaactca
      301 acgataaatt cgataaattc aaaccctata tcggcgcgcg cgtcgcctac ggacacgtta
      361 aacatcaggt tcattcggtg agaaaagaaa ccacgactgt tttcagtaaa ccaagtggta
      421 gcgctacaaa gccaggccag atcccaagtt tggttaccaa acctgcctat cacgaaagcc
      481 acagcatcag cagcttgggt cttggtgtca tcgccggtgt cggtttcgac atcacgccca
      541 agctgacctt ggataccgga taccgctacc acaactgggg acgcttggaa aacacccgct
      601 tcaaaaccca cgaagtctca ttgggcatgc gctaccactt ctgattcccc gacaccgatg
      661 ccgtctgaac cttcagacgg catgagacct ttgcctgcgc acttggtgcg ctggtcgcct
      721 ccgaacatgg cgcgacaccc gacatttccg ccgaacgcat cgggcgtttc atgaatccgg
      781 tttaaaacgc atggaaaaat gccgtctgaa agcctttcag acggcattgt gcttgagatt
      841 ccgtttacca atgactgaca aacgcttcca aatcggtatt cttgggctta tgcacttcct
      901 ctgtcggcgt gccgaccatc atcagcccga tgattttatc cttatccgca catccgaaag
      961 cctcacgcaa cagggggctg ttgacccaca tccccgtaat ccagacattg tcgaaacctt
     1021 gcgccgttgc cgccagttgc agcgcatacg ccgcacaacc cgccgtcagc atctgctccc
     1081 attccggttt cggcttaggc acatcgcggt tcggcgcaaa cgttacaccg ataaccatcg
     1141 gcgccatatt gcccactttt tccgcctttt tcatcgcatc gtcgccgaaa ttcaattcgg
     1201 caaccgtttg ctttaacaca tcgcgaaaac gttgcaatcc tacctcgcct tgaatcacgg
     1261 taaaacggaa ggggcgcata ttgccgtgat cgggaacttg ggttgccgcc tgaaatattt
     1321 gttccaactc cgccgcatcg ggggcggggt gcttcagctt tttggaagat cggcggttcg
     1381 tcaataattt taaagcatcc atatcgttat actccggtca tcggtcgggt gttcggacac
     1441 atatgccgtc cgaaggcttc agacggcata tccggcatca gcgcggacgg cggcaggctg
     1501 ccaatatatc catttccttc cgataggttt ggctgttgga aatgtccatc agccccaata
     1561 ccgtgctgaa atagtggtcg tgcgaatatt cgttttccgc cgctttttgt ttgaggcatt
     1621 ggaaatctat gcccccgtgt tggcggaagg ctttggaaaa ccacataacc atcgggatat
     1681 gcgtctgccc ggaaggcgcg atggcgtaag gcgcggcgtg caggtacatc ccgttttcgc
     1741 ccaaactttc gccgtggtcg gaaacataat gcaccacgct ttccaaatcg tcgcggtttt
     1801 caagtttgcg gataaccttg tcgataaact ggtccacata caaaaccgta ttgtcgtaag
     1861 tgttgaccag cgtggcgcgg gtgcatttgt tgatttcgtt ggtgtcgcag gtcggcgtga
     1921 atttgcgttc ggcttcggta tagcgttcgt aatacgtcgg cccgtggctg ccgatggtat
     1981 gcaggattaa aaccgcgtct ttatcgtttt tgttgaggac ttcgtcgaac ttagtcagca
     2041 ggatattgtc gaggcactcg ccgttgcggc agtattcggg caggttgagc gaggtaacgt
     2101 cggtattcgg cactttgccg cacacgccct tgcagccgga atcgttttcc aaccaagtaa
     2161 cttccacgcc ggcgcgctgc acgatgtcca gcaggttgtc ttggtgttcg gctttgattt
     2221 cgtcataatc cgtgcggtcg aaggttgaga acatacacgg cagggagtgc gcggtcgatg
     2281 tgccgcagct tctgacctgc gggaaattga caatttcatc gccgcgcgcg gcaagcagcg
     2341 gcgtagtttg gcggctgtaa ccgttcaaac cccagttggc ggcacgcgtg gtctcgccca
     2401 cgaccagcac cacgaaacgg cgcaggctgc cggccggccg gttttgcacg accgccatat
     2461 ccaattgcgt ataaggaata ttggaacgct tccaatcttt gtatttcgac acgcccgcgc
     2521 cgatgaaatt agacggcaca atcagatggg ttactgattt attgttgcgg aaaaacgagg
     2581 cgtaatcctg atattgcaac attgcgatgc ccaacgcgca caaaaaggaa acggcggcaa
     2641 gcacaaggcg tgtcaaaagc tccttatacc aaacgcggta tttaaccttg acggcgatat
     2701 acgccagcgc gggcaatacg cccaaacata caatccacag cacatagccc ggcgtaatca
     2761 ggcgtgcgct ttcggcagcc gtagtttgca agacattatt caacatcgac ttgttgaaat
     2821 agatattgaa aaatatttct tggtaagaca ccgccgcact gataaccaat atcaacggaa
     2881 tcaatacctt atgcacgaaa ggcagggcaa tgacgtgaaa aacgaaatta cttaaaaaaa
     2941 acagcaccac cggcatcgta tagaggaaga tatccgcccc ggtgccgtta aaaggatgaa
     3001 gctcgacaac tttggcaaaa aaggcgtaat tcaataccag cgaggaatac agggaaagga
     3061 aggcaatcag cgcggaagag ccgagcttcg gcctcaggtt cggttttatc atttggaatg
     3121 tgtcggataa gggttggaaa aggcatccgg catttggaat ccggattatt gaaaaagatt
     3181 cttaattata aggcaacgga gcaaagcagg gcaagaaaac ggaaggcgac gcaggctgtc
     3241 ggatacacat ctcggcacaa acagcatcac gcccggattg aaaaggacgg atagccgccg
     3301 gcagcacaat cttaccacct ccaaaacgcc gccggagaac gccgaaacag ccgatgccgt
     3361 ctgaagccgc ttcagacaac atcgggacat caaccgtaac gccgttggaa atcgcgcata
     3421 aaatctgcca aagcccgcac gccttcaagc ggcatcgcat tataaatgct ggcacgcata
     3481 ccgccgacgg ttttatagcc cttaagcagg cacaagccct gcaattcggc ttccagcaca
     3541 aaacggcggt caagctcctc atcctccgtt tggaacacga cattcatttt agaacgcgca
     3601 ttcggacgga tacggttgat atagaaaccg ccgctgccat ctatcgtctc atacaaggtt
     3661 tgcgccttca gccgattgac cgcttcaatt tttttcacac cgccctgcgc ctgcagccag
     3721 cggaacacca gccccgacat ataaatcgcg taagttgacg gcgtgttgta cataccgtcg
     3781 cggttgatgt gcgaacggta gttgaacaca tcgggaatat cgttcggaca acgctcgagc
     3841 aaatcctcgc ggataatgac cacggtcgca ccggccgggc cgatgttttt ctgtgcgcct
     3901 gcgtaaatca gtccgtagtc ggcaacatca aactcgcgcg acaaaatctc gctggacata
     3961 tcgcacacca gcggcggcat gccttctgaa aggcgcggca cttcacggta ttgcagcccg
     4021 ttgaccgttt cattgacggc aaaatggaca aacgccgaat cgggtgcaac atcccacgtt
     4081 tccacaggcg gcaggtcgag atagtcgaac tgctcgccgc catgcgccgc caaacggatt
     4141 tccgtatcgg tcaaacggct catctgttca taagcgatac ggctccagtt gcccgttacc
     4201 accgcgtcgg cagtgcggaa accgtgtgcc agattcatgg ctgccatatt aaattgggtt
     4261 gttgctccgc cctgcagaaa caatatctta tagttgtcag gcactttcaa aagctgcctc
     4321 aaatcctgtt ccgcatgatg caggatgctc aaaaacattt ccgaacggtg gctcatcgcc
     4381 atcacgggaa aacccgtacc gttgtagtcc aacatttcct gccgcgccgt ttccaacacg
     4441 gcttcgggca atacggcagg gccggcggaa aaattgtaaa tcggataaag agacatgatg
     4501 cagccttgat tctgaacaat aacccgcctg attttaggct tgcagcaggc tttgtgcaag
     4561 gatgggaaat acctgtcctc cgccccgctt catgccgccc gaacacggaa aacaacatca
     4621 atatattgat ttacaaatat aaaaatcatg ctagcgacaa atagatacat ttgttttgtc
     4681 aacaatattc acgatttccc attacaaacc tcccttacac ccgctttttt ccgtcccaaa
     4741 aacacaaaat aaatcaacac tttcatttct ccgcaaaagc ggttataatc acgccgattt
     4801 ttcaactttg acgaaaaatg gccacggggc cattttttta ttatgtacat agggagcagc
     4861 atggatatcc aaaccatcct cgaaaaaacc ctgcccggcc tgggctacga actggtcgat
     4921 ttcgaactga ccgcgcaagg aacattgcgc gtgttcatcg acaaagaagg cggcattacc
     4981 gtcgaagact gcgcaaccgt cagcaaccac ttgagccgcg tatttatggt tgaagacatc
     5041 gactacaaaa acctggaaat ttccagcccc ggactcgacc gccccttgaa aaaagccgcc
     5101 gacttcgtgc gctttgccgg tcagaatgcc aaaatcaaaa cccgcctgcc gatagacggt
     5161 caaaaaaact ttatcggtaa aatcgaaggc tgcgaaaacg acactgttac cgtttccttc
     5221 gacggcaaaa ccgtacaaat cgaattgggc aacatcgaca aagcccgcct gcgccccgaa
     5281 ttcaaattct aaaacacaac aatattggag atgttcaaaa tgagtcgtga aatgttacag
     5341 ctggcagaag cactggcaag cgaaaaaaac gttgatgccg aagtcgtctt ccaagcactg
     5401 gaattcgccc tgtctaccgc cgccaagaaa aaggcagacc gcgaacacat ggatgtccgc
     5461 gtacaaatca accgcgacac cggcgaatac caaaccttcc gccgctggct gattgtcgcc
     5521 gatgaagact atacctatcc cgatgtcgaa aaaaccatcg aggaaatcca agaggaaatt
     5581 cccggcacta ccatccaaat cggcgaatac tacgaagagc agctgcccaa cgaaggcttc
     5641 ggccgccaag ccgcgcaaac cgccaaacaa atcatcctgc aacgcatccg cgatgccgag
     5701 cgcgagcaga atctgaacga gtttctcgcc gtcaaagaag acatcgtgtc cggcacggtc
     5761 aaacgcgtcg aacgccacgg catcatcgtc gaagtcgttg ccggcaaact ggacgcgctg
     5821 attccgcgcg accaaatgat tccgcgcgaa aacttccgca gcggcgaccg catccgcgcc
     5881 ctcttcctgc gcgtcgaaga aatcggcaac accggccgca aacaagtcat cctgagccgt
     5941 acttccggcg atttcctcgt caaactgtac gccaatgaag tacctgaaat tgcagacggc
     6001 atgcttgaaa tccgcgctgt cgcccgcgac ccgggccagc gtgccaaagt cgccgtcaaa
     6061 gccaacgacc agcgcatcga tccgcaaggc acctgtatcg gcgttcgcgg ttcgcgtgtc
     6121 aatgccgtca gcaacgaatt gtccggcgag cgcatcgacg ttgtcctttg gtcgcccgag
     6181 cctgcccaat tcgtcatgag cgcgctctca cccgccgaag tcagccgcat cgtcatcgac
     6241 gaagacaaac acgccgtcga tgtcatcgtt gccgaagacc agctcgcgct cgccatcgga
     6301 cgcggcggtc aaaacgtgcg ccttgcttcc gacctgaccg gctggcagct caacatcatg
     6361 acttccgccg aggcagacga acgcaatgcg gcagaagatg ccgccatccg ccgcctgttt
     6421 atggatcact tgaacgtgga cgaagaaacc gccgacgtac tggttcagga aggttttgca
     6481 accttggaag aagtcgccta tgttcctgcc gccgaactgc ttgccattga aggatttgac
     6541 gaagaaatcg tcgatatgct ccgcaaccgc gcccgcgatg ccatcctgac catggcgatt
     6601 gccgccgaag aaaaactggg cgaagtatcc gacgatatgc gcaacctcga aggcgtagat
     6661 gccgatatgc tccgcagcct tgccgaagca ggcattacca cccgcgacga cttggcagag
     6721 cttgccgtgg acgaactgat tgaaattacc ggtgtaaacg aagaaaccgc aaaagccgtc
     6781 atcctgaccg ctcgcgaaca ctggtttacc gaagacaaat aaaagggggt acagatgagt
     6841 aacacaaccg tagaacaatt tgccgccgag ctgaaacgcc ccgtcgaaga cctgttgaaa
     6901 cagttgaaag aagccggcgt cagcaaaaac agcggcagcg attccctgac gctggacgac
     6961 aaacagcttc tgaacgccta cctgaccaag aaaaacggca gcaacggcgg caccatcagc
     7021 atccgccgca ccaaaaccga agtcagcacc gttgacggcg taaaagtcga aacacgcaaa
     7081 cgcggacgca ctgtcaacat tccttctgcc gaagaattgg cagcacaggt aaaagccgcc
     7141 caaacccaag ccgcacctgt ccggccggag cagacggcag aagacacggc aaaagcccga
     7201 gccgaagctg ccgcacgtgc agaagcccgt gccaaggcag aagcggaagc ggcaaaactg
     7261 aaagcggcaa aagcaggcaa caaagccaaa cctgccgcgc agaaacccac cgaagcaaaa
     7321 gccgaaaccg cacctgttgc ggcggaaacc aaacccgccg aagaaagcaa agcggaaaaa
     7381 gcccaagccg acaaaatgcc gtctaaaaaa cccgccgagc ccaaagaaaa agccgccaag
     7441 ccgaaacacg agcgaaacgg caaaggcaaa gatgccaaaa aaccagcgaa acctgccgca
     7501 cctgccgtgc cgcaacccgt ggtcagcgca gaagaacagg cgcaacgcga tgaagaagca
     7561 cgccgtgccg ccgcacttcg cgcccaccag gaagccctgt tgaaagagaa acaggaacgc
     7621 caggcacgcc gcgaagccat gaaacaacag gcagaacaac aggcaaaaac cgcacaggaa
     7681 gccaaaaccg gcagacagcg tcccgccaaa cctgccgaga aaccgcaggc agccgcgccg
     7741 gccgtcgaaa acaagcctgt caatccggca aaagcgaaaa aagaagaccg ccgcaaccgc
     7801 gatgacgaag gtcaaggccg caacgccaaa ggcaaaggcg gaaaaggcgg gcgcgaccgc
     7861 aacaatgcac gcaacggcga cgacgagcgc gtacgcggca gcaaaaaagg caaaaaactc
     7921 aaactcgagc cgaatcaaca cgccttccaa gcaccgaccg aacccgtcgt tcatgaagtt
     7981 ttggttcccg aaaccattac cgttgccgat ttggcgcaca aaatggcggt caaaggcgtg
     8041 gaagtggtca aagccctgat gaagatgggc atgatggtta ccatcaacca atccatcgac
     8101 caagacaccg ccctgattgt ggtggaagaa ctcggccaca tcggcaaacc tgccgcagcc
     8161 gacgaccctg aagcattctt ggacgagggc gcggaagcgg tggaagccga agcattgccg
     8221 cgtccgcccg tcgttaccgt catgggccac gtcgaccacg gcaaaacctc gctgctggac
     8281 tacatccgcc gtaccaaagt ggtacagggc gaagcaggcg gcattaccca acacatcggt
     8341 gcataccacg ttgaaacccc acgcggcgtg attaccttct tggatactcc gggtcacgaa
     8401 gcgtttactg ccatgcgtgc gcgcggtgcg aaagcaaccg atatcgtgat tcttgtggtc
     8461 gccgccgacg acggtgtgat gccgcaaacc atcgaagcga ttgcccacgc caaagcggca
     8521 ggcgtaccga tggtggttgc cgtcaacaaa atcgataaag aagccgccaa cccagagcgt
     8581 atccgccaag agctgaccgc acacgaagtc gtgcctgacg aatggggcgg cgatgtacag
     8641 tttatcgacg tttccgctaa aaaaggcctg aacatcgatg cattgctcga agcagtcttg
     8701 ctcgaagccg aagttttgga actgactgcc cctgtcgatg cacctgccaa aggtatcatc
     8761 gttgaggcac gtttggacaa aggccgcggc gcggttgcca cattgctggt tcaaagcggt
     8821 acgctgaaaa aaggcgatat gctgctggcc ggtacggcat tcggcaaaat ccgcgcgatg
     8881 gtcgatgaaa acggcaaatc cattaccgaa gccggcccgt ccatccccgt cgaaatcctc
     8941 ggcttgtccg acgtaccgaa tgcgggtgaa gacgcgatgg tattggcgga cgagaaaaaa
     9001 gcgcgcgaaa tcgccctctt ccgccaaggc aaataccgcg acgtgcgcct tgccaaacag
     9061 caggcggcga agctggaaaa tatgttcaac aatatgggcg aaacccaggc ccaatctttg
     9121 tcggtcatca tcaaggcaga cgttcagggt tcttacgagg ctttggcggg cagcctgaaa
     9181 aaactgtcca ccgacgaggt gaaagtgaac gtattacaca gcggcgtggg cggcattacc
     9241 gaatcagatg tcaaccttgc catcgcttcg ggcgcgttca ttatcggctt taacgtgcgt
     9301 gcagatgcct cttcgcgcaa acttgccgaa aatgaaaacg tggaaatccg ctactacaac
     9361 atcatctacg atgccatcga cgacgtgaag gcggcgatga gcggcatgct ttctccggaa
     9421 gagaaagagc aagtaaccgg tacggtcgaa atccgtcagg tcatctccgt ttccaaggtc
     9481 ggcaacattg caggctgtat ggttaccgac ggcgtggtca aacgcgattc ccatgtccgc
     9541 ctcatccgca acaacgtggt catccacacg ggcgaactgg cttcgttgaa acgctataaa
     9601 gacgacgtca aagaagtccg tatgggcttt gagtgcggcc tgatgctcaa aggctacaac
     9661 gaaatcatgg aaggcgacca actggaatgc ttcgacatcg tcgaagtggc acgcaccctg
     9721 tgattttgat gcggaaaaat gccgtctgaa gcgttcagac ggcatacgga acgggttctg
     9781 tatcatacag aacccgtttt ttatcgcaaa tcggcttcag acagccctcc tgccttatcc
     9841 cgatttgaat ctgacttgcc atacaaacag gcttcagacg gcattatagt gaattaaatt
     9901 taaaccggta cagcgttggc tcgccttgcc gtactatttg tactgtctgc ggctcgccgc
     9961 cttgtcctga tttaaattta attcactata ttttcccgac aggcggattt gaagtttctc
    10021 cacatatccg gcgcgttcgg cgcggctggt ttcggggcgg tgcgtattga gcgacgacca
    10081 tttccaatga ctgcgggctt tgttgagttc gggcgggagt ctggcggcgt cccacggggc
    10141 tttgcggctg tgcagctcga tatccgactg tgccgcgtgt ccgcgcgttt gcaggacgtg
    10201 gagcaaatcg agggcgcggg cggcgagcag ggtcaaggtt tcagggtcgg tgtgcaaggt
    10261 ttggcggccg gagagtttgt cggaaatggt gcgggtattg ggcaggatgc cgcccaaaaa
    10321 gccgccgatt gccgtaccca atccgagcga gccgccgagt gtggcgatgt ccagccccaa
    10381 gccgatgagc gcgccggttg ccgcgcccgt gccggtgcgg atgccgtatt gtttgagcaa
    10441 ttcgctgtcg aacgggtctt ggcggaaggc ttgcggcatc cagtcgccgc cgtcgatttc
    10501 gctgtggtag aaacggtaga gggcaaacag ccgctgctgc atctgccgtt cgagttggcg
    10561 tatttccgcc tgcatggttt gtagcacggt ggcggtatcc tcgttttcgt ccacttcctg
    10621 cctgaaggcg gcggcatcaa ttaaaaagtc ggcgatttcg cggcgcgctt cgccgtccag
    10681 ccgctgccat tcgcgccggc gcatggctgt caggcggtca agtgtgctgc gttcgggcaa
    10741 catggtggcg aggttttccc acaggcgtag ttcgccttca aaatcaaagg cgacggtgtc
    10801 gaaccctgcg aaaacgtgca ggtttctcct cgccagcatg gttgtccacg attcgggagg
    10861 ctgtccgccg gtaaagttga acacgggcat aaccggtttg gcacaccatg aaaggatggt
    10921 caactcgtcc ctgtatttgt cgaggacggg ttcgcgcgcg tcgatgacgt acattgccat
    10981 atcgctttgc aagacttgcc gtaagacttt ggcttcctga ttgaaatcat ggtgcgcgcc
    11041 gtggctgccg agaaactgtt gcagccgttc gatgccgtct gaacgattgt ccgtatggtt
    11101 ttccagccat tccagcacgc cgcctgcgtc ttcgagtccg ggcgtgtcgt acaggaaaac
    11161 cagcgtgtct gcgccgtcgc tgatggcggc ttcttcgaca tgacgcgtgg tcgatggggc
    11221 gtttctgact tcgccgaaac cgctgtcgcg caacagggta cgaaggagcg aggttttgcc
    11281 ggtgttggta tgcccgacga cggcgaggga aaggggttgt ttgttcatga tgtttttgaa
    11341 gaatggattt tcagacggtc ttttttcaga atggcggctt aacagaacat ttcaagtgag
    11401 tttattggtc tttcaaacgc ccttcctgcg ccgccctgtc aggctcaagc cacgccgcgc
    11461 cgcattcggc cagcgcgtta cgccaatgtt ccagcttttc cgaaaggtcg tctgaaagcc
    11521 cctgttccgc caaaagctgc accaccgcgc cgccctgcgc cgcttccgaa agtcggacga
    11581 tctgccgcaa cacgccgcgg tcgggcacag tttgggcgcg cacgccgata agcagttgcg
    11641 ccggtttctg cttcagctct gtctccagcg cggcaacctg ttcccgattg gcggcaacgc
    11701 ccttatccag ccattcctgc gccagcctgc cctcgaacca ttcgccgtcc tgccattcgg
    11761 tctccagcat gaccgcccat ttcggcgcat cgttcaagac gattttcggc gaaacggcgg
    11821 acacggtttc ccgacgcgta tccgcatcgg tgattttgtt ctgccagcgg cggatgaccg
    11881 cctgataata gggtttttcc aaatccaatc cgttttcgct tgttttcaaa aggattttgc
    11941 ataccgccca agccaagagg cgcggcagga tgccgtagca ggcgatactg ccgaccagca
    12001 gccccgacca agcccgcgca tcggcaatat tgccgttcag acgaccttcg atgaccgccc
    12061 gcgcatcagg cacgggaaaa cccagtttcg caggcagcca tgccaacatt tccaccgcgc
    12121 gtaccgaagc ggcattgctc aacagcgtgc tttcccagtt gaacgtatat tgccgcacca
    12181 aaagcagcaa caataccgac accagcattc cgagcagcgt gcagagccac aggctgtgcg
    12241 acgttgcgcc tattttccaa cgtaccgaag gttgccgcca ctcgtccgca tacagccgca
    12301 acaccgcctg atttacaggg tctttgcccc gaaaccacgt cgccggactg ctgaaaaaac
    12361 gccccacttt cacgcgcagg aacaacattg ccaaccatac tgccagcatc agcgtattca
    12421 tgcccaacac gcccgccaaa accaaaaaga aattcagacc ctgattgtcc attagaagat
    12481 aagtacctga aaaaccggta aaaaacgcaa acgtcgccgc cgccacccac aaccagaacg
    12541 accccgcacg cacacgttcc aacgtctccc gcagcatacg gttcctgtca atcatctccg
    12601 cccgacggat gattttttcc tccgtactgc cgtccacgcg gcgcaaagcc tccgtcgcct
    12661 gcacgggatc gccgctgaaa ataaaaccgc cttcgtccaa aatacggatc agctcaacca
    12721 gttttcggga tggattcaac ataaaatgcc gtctgaaaat aaaaaacaga ttttaacaca
    12781 cgcattttca agaatattca cagtgtaggc aaagagtaaa tctcacacag aagcaaaagt
    12841 atcggcgtaa actgactgcc tctactttcc cgaaagattg tgcgatgtat acaggcgaac
    12901 gcttcaatac ttacagccat ttgagcggtt tgattctggc ggcggcaggt ttggcgctga
    12961 tgctgctgaa aaccatagga cacggggacg gctaccgtat cttcagcgta tcggtttacg
    13021 gcatcagcct tcttctgctc tatttgagtt cctcgctgta ccacggaatt gcagccggaa
    13081 aactgaaaag cattttgaaa aaaaccgacc actgcatgat ttatgtcctg attgccggaa
    13141 gctacacacc gtttgcactg gtttctttga gaaacgggcc gggctggacg gtattttcac
    13201 tgtcctggct gctggcggct gcaggaatcg cacaagaact caccatcgga cggaaaagcg
    13261 aaaaacgact gctgtctatt gcgatttatg tcgtcatggg ttggatggtc ttggcggtaa
    13321 tgaaatccct gacagcctca ctcccgccgg caggactggc ttggctggcg gcaggcggta
    13381 tgctgtacag cgtcggcatt tactggtttg taaacgatga aaaaatccga cacgggcacg
    13441 gaatctggca tctgttcgta ttgggcggca gcatcaccca atttgtcagc gtgtacggtt
    13501 acgtaatctg aatgccgtct gaaaagcaaa acctcccgat cctgaagatt gggaggtttt
    13561 ctgtttgccg gacatcagcc cttgtcgtgg aactcgtgaa attcatactg ataggacaaa
    13621 tcccgacccg cttttttctg tgccaaataa tcatcataaa tggcacggat ttccttacgc
    13681 aacaaaaaca gggctatcaa gttcgggata accataaagc cgttgaacat atcggacagg
    13741 ctccaaacca aatcgacttt gccgagcgta cccaaaacga tggcaagcag aaccaatgcg
    13801 cgatagatgc ccaagtgtct tcccctgaaa agaaaacgga tgttggactc accgaaataa
    13861 taccagccga taatggtcgt caaggcgaaa aaggtcagac acacggcaag caattgcgaa
    13921 ccgaagcccg gaaatgcctt gttaaaggca aattgagtaa ccgccgcgcc ctgttcgccc
    13981 gaaaggttgg catcggtcag caggataatc agcgcagttg ccgtacatac caaaatcgta
    14041 tcgataaata caccgacaaa tgccgccata ccttgctgca caggatgctt cacatccgca
    14101 gtcgcgtggg cgtgcggggt agaacccatc cccgcttcgt tggaaaacag accgcgcgcc
    14161 acgccgaaac ggacggcttc gcgcataccg atacccgccg caccgcccaa aacggcttcg
    14221 ggattgaagg cggcggtaaa gatgtggttg aacatcggca caatatggtc ggaaaattca
    14281 aacaggataa cgacggcgca caaaatataa acaaccgcca taaacggcac gacaaattgg
    14341 gcgatattgg caatacggtt cacgccgcca atcacaacca tgcccgcaag gacggcaagc
    14401 acaataccga ctgccaaaga aggcacatca aatgcaatgg taacggcaga agcaatggag
    14461 tttgcctgtg tcgcattacc gataaagccc aatgcgataa tcaacgcaat ggaaaagaaa
    14521 ccggacaaaa aacgcgccgc gcccctgccg attttcggag tcagaccgtg ggtgatgtag
    14581 aacgccggcc cgccgatgta tttgccgtgg ctgacgacgc ggtatttctg cgccagcagt
    14641 gcctccgcaa aaatcgtgga catccccaaa acggcagaaa cccacatcca aaaaatcgcg
    14701 cccggcccgc ctgcggtgat ggcggtcgcc acgccggcga cgttgcccgt accgatttgc
    14761 gcagatatgg caaccgccaa cgcctgaaac tgcgataaag acttgtcgtc tttatcgcct
    14821 ttggcaaaca agccgccgaa tacggatttg aatcccgcgc ccagcttggt aatctgcggc
    14881 gcaccaagat acagcgtaaa aaacaggccg atacccaaaa gcgcgtaaat cagcaggtag
    14941 tcccaaagga accgattgac tgtacccacc agaacagaca atatattttc cataaaataa
    15001 accttatctt acaattaaaa tgactgcctt ccaaaagaca ttccaataag gaaacacggc
    15061 gagcagaccg tatttgccgc aacagatgcc ttaaattgtc aacaatcggg gagaagctgc
    15121 gccatcatac cgtaaaatat cgttaattaa aacatttctt tatttttaag cggaaagcgg
    15181 aggaaatcgc tttcagacgg catcgacaac ggcacggcat aaaacaggat attttgggta
    15241 cttgcaactt atgttaaaat gccgaccgta aaaaatctga caaaaacaga ttaattattt
    15301 gaaataagaa aggaaattta tggcaggcca tagcaagtgg gcgaatatcc agcataaaaa
    15361 agcccgtcag gatgccaaac gcggcaaaat cttcacccgt ttaatcaaag aaatcaccgt
    15421 tgcggcgcgt atgggcggcg gcgaccccgg ttcaaatccg cgcctgcgcc tggctttgga
    15481 aaaagcagcc gaaaacaata tgcccaaaga caatgtgcaa cgcgccatcg acaaaggtac
    15541 gggcaacttg gaaggcgtgg aatacatcga attgcgctac gaaggctacg gcatcggcgg
    15601 cgcggctttg atggtggact gcctgaccga caacaaaacc cgcaccgttg ccgacgtgcg
    15661 ccacgcgttt accaaaaacg gcggtaactt gggtactgac ggctgcgtgg cgttcaactt
    15721 cgtgcatcag ggctatttgg tattcgaacc cggcgttgac gaagacgcgc tgatggaagc
    15781 ggctttggaa gccggtgcgg aagacgtggt taccaacgac gacggttcca tcgaagtcat
    15841 taccgcgcca aacgattggg cgggcgtaaa atccgctttg gaggcggcag gttacaaatc
    15901 tgttgacggc gacgttacga tgcgcgccca aaacgaaacc gaactctccg gcgacgatgc
    15961 cgtcaaaatg caaaaactga ttgacgcgct ggaagacttg gacgacgtgc aagacgttta
    16021 cacttccgcc gtattgaatc tggactgata cgcagcacag cagacataca ataaaatgcc
    16081 gtctgaacct ttcagatggc attgatttat ttagcccttg cccacgccca ccaaaccgtc
    16141 aggacaaccg ccagaaaata cgccgcgctc caaacaggca aagcaacccc taacagataa
    16201 tccggttcgg cacaatttcc gaacccgcgc acgacaggct cgaaccaatc aaacaaagac
    16261 cagcccttca agcggaacgt ccacggcgca ccgcacgaag gagccgtacc cggcggcagc
    16321 gactgcaacc acaactgata tgccgcaaca gaaatacccg taacggccgg aatgctgata
    16381 aagacagcac cgaacaaacc gcccgccctt cttcttggtc tgcacatcag gacaattgcc
    16441 gtacacaatg cggttgccaa aacgcataac cgctgactga tacacaaaac gcaaggctcc
    16501 atacccaaaa catactgtgc cgccaaagaa ccggcaaatg cacagaccga aacggcaaac
    16561 agcagccaaa cggcttttct aaataacggg gtcattttct caacacacca atcaaaatac
    16621 cgatatgccg attttgctgg atatatcccg agatggcaag ggacgaatcg acaccggctc
    16681 aggtgcggac gatttcggtt ttccccgata tgcacaaaac ctgacaaggg acaaaacggc
    16741 gatttgcccg cacaatgccc acaaaaaaat acatccggag gatttgaatt tcagcaaatt
    16801 tagcgaatca aaagtttatt tcaatgaaat catatgattt ttttgaataa gcggattgat
    16861 gggtttttga aggaatttgt taccggatag ccatcgggca agttttttgc aaaatttgaa
    16921 tcggtcgggt aaattttcaa aaaataattg acagcggata agaaacggcg gataattccc
    16981 gccgtcgagt tgcttgatgc agcttgattt ttctcctcta tttctccttt gtagacttgg
    17041 cacacattca accggatgtg tgcatttttt tatctccgct ttttttgaaa tttaattact
    17101 tttattgttt gaaattccat tctttaagaa atttaacaag aaaaacgctt gctttttgac
    17161 cggaaaagct gcataattcg ttccgttagc tggttcgagt agtcagttaa tagtttctcc
    17221 tctatttctc ctttgtagac ttggcacaca ttctattgaa tgtgtgcatt tttttatctg
    17281 aagcaacaag cctctgtgcg tgatgttgtt atgtttcatt taggtgtcaa accgcatagc
    17341 cagcctgaaa tattcaatcc aaatccaaaa ccggattttc tttgacctcc tccatcacaa
    17401 cataactcct actctccgaa gcggcaggca gttgcaatag gatattgcct agcatatccc
    17461 gataggcaga catatcgggc aaacgtactt taatcagata gtcgtattcg cccgacacca
    17521 agtggcattc cataatttgc ggaattttca gcacttcttt tttgaaatct tcgaaaatat
    17581 tgcccgattt ggattgcagc ttcagctcga caaaaaccaa tagtggtttg cccaacagat
    17641 ggggattgag atgggcgtga tagccggaaa tataatgttc ccgctccaaa cggcgcaccc
    17701 tctctgtaac gggcgtggtg gacaagccta ccttctcggc aagctccgtc atcgggatgc
    17761 gggcattctg ttggaggatc ttaagaatgc ggaaatcgat tttatctagt tctttcattt
    17821 ggattacctt gtatttatta ttgattttaa caaatagagt atatagtgga ttaacaaaaa
    17881 ccagtacggc gttgcctcgc cttgccgtac tatttgtact gtctgcggct tcgtcgcctt
    17941 gtcctgattt ttgttaatcc actatatatt tgggaaagcg attatatcag gaaaagcaaa
    18001 ccgccttcct acctgaaaac tgctgcttcg gcttgaagac acaagggtct ttaatatttt
    18061 aaaagccttg ccgttggatt ataattccct aattgatttc ttaattttgc taataaacac
    18121 ttgcttggta aggaatgaat ttatgcgccc tttgaacgtg cagatcaggt tgggcaacct
    18181 taggcacaat tatcggattt taaaggaaat gcacggaggc aagctgttgg cggtagtgaa
    18241 ggccgacgca tacggacacg gtgcggtcag atgtgctttc gcgctggcag acttggcaga
    18301 cggctttgcc gtggcgacaa tcgatgaagg aatcaggctg cgggagagcg gcattaccca
    18361 tccgattgtc cttttggaag gcgtatttga agcatcagag tacgaagcgg tcgaacaata
    18421 ctcgctctgg ccggcagtcg gaaaccaatg gcaacttgag gctttgcttt cccgccattg
    18481 gaaaaaacct gtcaaggtct ggttgaaaat ggattcggga atgcaccgta ccggattttt
    18541 ccctcatgat tacgcttcgg catatgcggc attgaaacag tcggaatatg tggacagtat
    18601 tgtcaaattc tcgcatttct cctgtgcgga cgaacccgaa agcggtatga cggaaataca
    18661 gatggaagca ttcgatttgg gtacggaagg gctggaaggc gaagaaagcc ttgccaattc
    18721 ggcggctatt ttgaatgttc ccgaagcacg cagggattgg gggcgcgcgg gcttggcgtt
    18781 atacggcatt tccccgttcg gaggcagcga tgacaggctg aaacccgtga tgaggctttc
    18841 aacccgtatt tttggcgaac gcgttttaca gccgcactcc cctatcggtt atggcgcaac
    18901 attttatacc agcaaatcta cgcgcgtcgg tctgattgcc tgcggttatg cggacggtta
    18961 tccgcgccgc gctccaagca attcccccgt cgccgtcgac ggtaaattga cccgggtcat
    19021 cggcagggtc tctatggata tgatgaccat cgagctggac gcttcgcaag aaggtttggg
    19081 acacgaggtc gaactgtggg gcgatacggt caacatcaat actgttgccg aagcggccgg
    19141 aaccatccct tacgaattga tgtgcaatat caaacgtgca aaattcactt atatcgagta
    19201 atcgagtcca aacaaaaatg ccgtctgaag cctttcagac ggcatttccc catcaaaacc
    19261 gcaatcagtt tttcattgat tgaaccggag ccgggattct gccgccccgt ttgacgaaca
    19321 cttcgcacga accttctttg accggcatta caggcgcgta gcctaacagg ccgccgaact
    19381 cgacactgtc gccgacggtt ttaccggtta ccggaataat gcgcacggca gtggttttgc
    19441 tgttgatcat gccgatggcg gcttcgtcgg caatgatgcc ggaaatggtg tgcgcgggtg
    19501 tgtcgccggg aacggcaatc atatccaagc cgaccgaaca aacggcggtc atcgcttcga
    19561 gtttatccaa cgtcagcacg cctgcttcgg cggcggcaat cataccttcg tcttcggaaa
    19621 cggggataaa cgcgccactc aaaccgccaa ccgcgctcga agccatcatg ccgccctttt
    19681 tcacggcatc gttcagcaat gccaaagctg ctgttgtgcc gtgcgtaccg cagacgctca
    19741 aacccatttc ttcaagaatg cgcgccaccg agtcgccgac ggcaggggtc ggtgccagcg
    19801 acaagtcgag aataccaaac gggatattca gcatttttga ggcttcgcgg ccgatgagtt
    19861 cgcccacgcg ggtaattttg aaggcggttt tcttcacaac ttcggcaact tcggtcaatg
    19921 tcgttgcatc cgaattttcc aacgcggctt ttacgacacc tgggccggat acgccgacat
    19981 taatcacagc atccgcttcg cccgatccgt gaaacgcacc cgccataaac ggattgtctt
    20041 ccaccgcatt gcagaacacg acgattttcg cgcagccgaa accttcgggc gtaatttcag
    20101 ccgtgcgttt gatggtttcg cctgccagct tgaccgcatc catattgata ccggcgcgcg
    20161 tactgccgac attgatggag ctgcacacga tgtcggtggt cttcatcgct tcgggaatgg
    20221 aacggattaa cacctcgtct gaaggcgaca tgcctttttg caccaacgcg gaaaagccgc
    20281 cgataaagga cacgccgatg gctttggcag ccttatccaa agtttgcgcc acgctgacat
    20341 aggaatcggc atgggtagcc gccgcgattt gggcaatcgg cgtaacggaa atgcgctgat
    20401 tcacaatcgg cacgccgtat ttggcagaca gatattttgc cgtcgccacc aagtctttgc
    20461 cgaccgtggt aattttgttg taaatgtttt ggttcaacac attgatatcg ctgctgatgc
    20521 agtcgtgcag atcaatgccg atggtaatgg tgcggacatc aaaattctgg tcggcaacca
    20581 ttttgacggt ttctaaaatt tcgccggatt ggatactcat cacattcctc cgactcaaat
    20641 gcggtgcatc gcttggaaga tttcttcatt ttgcatacgg atatcaagcg cgagtttttt
    20701 gctctcttcc gcaaacaaat ccaaaacctc ctgccgagat ttggggcatt tcgaggtatc
    20761 caccaagata atcatggtaa aaaaatcatc catcagctgt tggctgatat tgaggatgtt
    20821 gattcggttt tccgccaaaa ttttggaaac atcgtacacg atgccgacgc ggtctttacc
    20881 gatgacggtg atgactgaat tgttcacagg cttactcctt gcagatatcc gttaaagtcc
    20941 gaaattatac caccgttgga ttttgaagaa atattgtcaa caatatatac atacaaaatg
    21001 ccgtctgaaa ctatttcaga cagcatcaag attcagggtt cgattaaata accatcctta
    21061 tcccactggg ttttcctgac caacttgtca tcctgataaa cagcttcact ctttttagaa
    21121 ccatcttcat accactctaa gactactcca ttacgtttat gatgatggat agacagttcc
    21181 gagagtaatc gaccgctttc atcccatgtc agaatcttgg ccggctcatc attgaccata
    21241 accatttccg ttttgatatt gccatcagca taccattgtt tccatacgcc gtttgcctta
    21301 ttttgtttaa actggatttc gctttccttg ctgccattac ggtaatagcg gtaccccgta
    21361 ccttcactca aaccattttt ataaggcata accgcagatt ttttaccgtt cggataccag
    21421 ttgacccact caccgtccgg cttacccttg ctgaagcccc ccgccatttt tttctgacca
    21481 ttaaaatgcc acaaaatcaa cataccgttt tgcagggtag gcacaaaaga tttgatttgc
    21541 gttgaagcaa cgatataagg ttcggaatat ttcttcatcg acggataata aaaatcctgc
    21601 gcgtacgcaa taccctccgc cacactatat tgcctgatat aagcggcaga agacatcgtc
    21661 gccgtcagtt tcccgttctg attaaaataa acagaatagg tctgtgccga taaagaagcc
    21721 gaaaaaccca acaggacaat tgaaaataca atccgagata attttttcat tgcaatagcg
    21781 atataaaaac aaggctgtgt tttagtaatc tgttgatttc aattatttgc aagggaaaag
    21841 acaattattt tccggttagg aataaaccta ttctactgaa tatattgaag ccaagtacgc
    21901 ctatcaacac tatattaaaa cactgccaaa aacaattaac ttataaacaa tatggtaagg
    21961 atttctctgc caagcatcaa acccgagaca acgtatcgta aaaatgccgt ctgaaaacaa
    22021 atcgtcttca gacggcattt ccccttcaac tcactcttca cccaataact gctcgcgcgt
    22081 caagaggaaa acaaaaccgt cgcccccgct ggtttccaac caagtaaaag gcaactccgg
    22141 atacgctgct tccaatacat ccctgttatg cccgatttcc accagcaata cacctttggg
    22201 attcagaaac tttgccgcat tcagaagaat ctgcctggtg gcatccaacc cgtccgcccc
    22261 gctgcccaat gccaattccg gttcgtgcaa atactcttca ggcaataact caaccgattc
    22321 cgcatccaca taaggcggat tggaaacaat caaatcataa gtgccttcca atccttcaaa
    22381 caaatccgta tgaataagcc ggatgcgttc ttccaaacca taatcttcga cattaatccc
    22441 tgccacttcc aaagcatcca agctcacatc aaccgcatca atttgggcat caggataatg
    22501 atgcgccatc tgaatggcaa ggcaaccgct tccggtgcaa agatccaaag cattatgcac
    22561 caactcatcg tattctatcc aaggacgaag tccgtcaccc aacaattcat aaataaaaga
    22621 acgaggtatg attacgcgct catccacata gaaatcaaac tctccctgcc atgcctggtg
    22681 tgtcaaataa gcggctggaa tgtgttcgac agcacgacgc tcaataaccg tcagcacttc
    22741 ctctttttca gcttccaaga gttttgcatc aagatatggg gcaagcatat ccaaaggcaa
    22801 attcaaagta tgcagaatca aataagctgc ttcatcatgc gcattatccg ttccatgacc
    22861 aaaaaagagc cctgcctcat taaaacggct gactgcaaaa cgtaaaacat cgcggatagt
    22921 cgtcaattct tgtgctgcct gattaaacat aatatgaacc attctgcgta tagatacttt
    22981 taattataac agaaacaaca agcaaacctt ttcatatcgc caaataacca cccaatctac
    23041 ccatacaact acataaatgc ccgcgcgaaa accatcgccc gaacggaaac gacaatggcc
    23101 gacggtatgg gcaacctgat tggctgggaa aaaacggggc ttgttgccgg taagcagtgg
    23161 ataaccgcaa aagacgacaa ggtgtccgat gtctgcaatg ccaacggcga gatgggcgta
    23221 atcgggcttt acgagccttt ctcacacggc gcattgacga tacccggtca tccgaactgc
    23281 cgatgcgagg ttgtttccgt atcgggtggc gaattggggg aatttgccga aaaaaaggag
    23341 cttcgtaaag cggctatgca gtatgcgcgg gataacttta tcggcaaaag ctatgtcaat
    23401 gaaaacagcg ggcatgaact gaaggtaact tggcaaggtg tgaaacacgc tgcgtcaaag
    23461 gcaaatcagg cggaattatc catcatgaca aaacttgatg acttattgcg ctacgcaaaa
    23521 tatgagggtt cttattcgga taggaaaggt catcctaata ttattgcagc acataagtat
    23581 cgtgccgttg ccaaggttgg gaatgagtct ttaaatatcg gtgtgattgt aagggaattt
    23641 ccagacgacc ataaacatta cgaccatttc atcttgaagg atgaataaag cccttttgca
    23701 gtgtcgttct ggagcggata gcgttaaggc aagtacactt ccagccttga aaaagggctt
    23761 taaattcagc atgccattta tacaggcagg agtaaaccca tgacaaagtt atacgcagaa
    23821 atcgccaaga tggagacgca ggacgacgac acggtcaagg tttggggtta cgcttcaagc
    23881 gaggaaatcg attcggacgg cgaagtcatc gcgacggcag ctatgaaggc ggcgattccc
    23941 gattatatga agtttggcga ggggcgcgag atgcacggct caaacgctgc gggaacggca
    24001 attgaaatca acgttgaaga cgacggcata acctttttcg gtgctcatat catcgacccc
    24061 gttgtcgtgg cgaaagtcaa aacaggcgtt tacaaaggct tttccatcgg cggcagcgtt
    24121 accgcccgcg atgatttgaa caagtcccaa atcacgggct tgaagctgac ggaaatcagc
    24181 cttgtcgacc gccctgccaa tcccgatgcg gtgtttacct gctttaaggc ggacaaaggt
    24241 gcggaagcgg taaacaacga tacagaacat aatgctacat attttagcca tttcccttcc
    24301 aaacaaaaaa gcaccggcgg cagccgatgc cccttccttt acaggttcc
//
LOCUS       DBBZYD010000019        24149 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.019, whole genome shotgun sequence.
ACCESSION   DBBZYD010000019 DBBZYD010000000
VERSION     DBBZYD010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24149
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.019"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(84..1130)
                     /gene="recA"
                     /locus_tag="ACJJDL_000643"
     CDS             complement(84..1130)
                     /gene="recA"
                     /locus_tag="ACJJDL_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HGG7573410.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEVANEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            1384..2148
                     /gene="aroD"
                     /locus_tag="ACJJDL_000644"
     CDS             1384..2148
                     /gene="aroD"
                     /locus_tag="ACJJDL_000644"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HGG7573411.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLDQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGAFPCSDDYYFKLL
                     DALIESRLPDIIDIELFAGETAVRRAVADAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLEAKRLAAKPVVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            2168..4183
                     /gene="rep"
                     /locus_tag="ACJJDL_000645"
     CDS             2168..4183
                     /gene="rep"
                     /locus_tag="ACJJDL_000645"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HGG7573412.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRHKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDNLKKSGAAD"
     gene            complement(4251..5309)
                     /gene="dinB"
                     /locus_tag="ACJJDL_000646"
     CDS             complement(4251..5309)
                     /gene="dinB"
                     /locus_tag="ACJJDL_000646"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HGG7573413.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYDSEVAKEIRAAIFAETGLTASAGIASNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMQTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCASLLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
     gene            complement(5453..8541)
                     /locus_tag="ACJJDL_000647"
                     /pseudo
     CDS             complement(5453..8541)
                     /locus_tag="ACJJDL_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            8815..9594
                     /locus_tag="ACJJDL_000648"
     CDS             8815..9594
                     /locus_tag="ACJJDL_000648"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HGG7573414.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSIRFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYVMHRNRIPGQIMMENGF"
     gene            complement(9804..11189)
                     /locus_tag="ACJJDL_000649"
     CDS             complement(9804..11189)
                     /locus_tag="ACJJDL_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HGG7573415.1"
                     /translation="MIVTSRWPLLEKAFLRFGMPVAVVDLESTGGNLYEDRVTEVALV
                     KFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELFSVLKGCVLV
                     AHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSIIERLGIVVED
                     RHRAMADVSALCDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLREQLYGLPDG
                     MGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKAPFDWCNTEEVRFFPALGRLHAHK
                     VKAELVRHYGVDCYVSAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFS
                     NKKAARRALSSWAETYGLCPASAGILPDGYAEDEPCPVYVSGRCDKACDRSDEQVLAF
                     AHKLPVLDWGKMHEVEITETDPLTGKTVVLHGMGGALEMDDGLWYFDKDLPDVFKAKF
                     KTDRKNIKEIG"
     gene            11307..11383
                     /locus_tag="ACJJDL_000650"
     tRNA            11307..11383
                     /locus_tag="ACJJDL_000650"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11341..11343,aa:Arg,seq:acg)
     gene            11401..11475
                     /locus_tag="ACJJDL_000651"
     tRNA            11401..11475
                     /locus_tag="ACJJDL_000651"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11434..11436,aa:Glu,seq:ttc)
     gene            12035..13210
                     /locus_tag="ACJJDL_000652"
     CDS             12035..13210
                     /locus_tag="ACJJDL_000652"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HGG7573416.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIRREGKLQANAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(13552..14100)
                     /locus_tag="ACJJDL_000653"
     CDS             complement(13552..14100)
                     /locus_tag="ACJJDL_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HGG7573417.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(14103..15599)
                     /gene="ccoG"
                     /locus_tag="ACJJDL_000654"
     CDS             complement(14103..15599)
                     /gene="ccoG"
                     /locus_tag="ACJJDL_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HGG7573418.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRVSVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            16127..18106
                     /gene="tkt"
                     /locus_tag="ACJJDL_000655"
     CDS             16127..18106
                     /gene="tkt"
                     /locus_tag="ACJJDL_000655"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HGG7573419.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPDNF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGIKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYVISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQAAVLPESLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            18247..19635
                     /gene="fumC"
                     /locus_tag="ACJJDL_000656"
     CDS             18247..19635
                     /gene="fumC"
                     /locus_tag="ACJJDL_000656"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HGG7573420.1"
                     /translation="MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(19700..20623)
                     /locus_tag="ACJJDL_000657"
     CDS             complement(19700..20623)
                     /locus_tag="ACJJDL_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7573421.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(21148..21672)
                     /locus_tag="ACJJDL_000658"
     CDS             complement(21148..21672)
                     /locus_tag="ACJJDL_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HGG7573422.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
     gene            complement(21676..23058)
                     /locus_tag="ACJJDL_000659"
     CDS             complement(21676..23058)
                     /locus_tag="ACJJDL_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7573423.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQDGLQCALSQLEGVEDIGFSFDRQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            complement(23169..23792)
                     /locus_tag="ACJJDL_000660"
     CDS             complement(23169..23792)
                     /locus_tag="ACJJDL_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HGG7573424.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIMLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            23848..>24149
                     /locus_tag="ACJJDL_000661"
     CDS             23848..>24149
                     /locus_tag="ACJJDL_000661"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573425.1"
                     /translation="MIASNAKNRAQNPSAAYRPALFGQTSILPPSRTLVQTGTGDTAR
                     AFPVFNGYPSSGLCSSTISASRFSGGSRRKYSRLNLNQYSVASPCRTDLNLIHYIL"
BASE COUNT         5884 a         6865 c         5953 g         5447 t
ORIGIN      
        1 caaaactcaa atcaagccgt tcggaggcgg ctcaaaaaaa cggtacttcg cagcagaagt
       61 accgtttatc gggatttcag gttttattct tcggggcgtt cgccgtcggt ttcgtcctgc
      121 gtcccttcgg tgatgtgcat ttctacgccg ttgagggcgc ggatttttgc gtcgatttca
      181 ttggcgactt cgggattttc cttcagccag acgcggacgt tgtctttgcc ctgaccgatt
      241 ttcgcgccgt tgtagctgta ccacgcgccg gatttgttga tgatgtcgtt tttcacgccg
      301 atgtcgatca attcgccttc ccaactgatg ccttctccgt agaggatgtc aaactctgcc
      361 tgacggaacg ggggggcgac tttgtttttg atgactttga cgcgggtttc gttgcccaat
      421 acttcttcgc cttttttgat ggatccggtg cggcggatgt cgaggcggac ggaagaatag
      481 aatttcagcg cgttgccgcc ggtggtggtc tcggggctgc cgaacattac gccgatcttc
      541 atccggattt ggttgatgaa cacaaccagc gtgttggttt ttttgatgtg tccggtcagt
      601 ttgcgcaaag cctgactcat caggcgcgcc tgcagtccga catggctgtc ccccatatcg
      661 ccttcgattt cggctttggg gacgagtgcg gctacggaat cgacgactac catatctatg
      721 ccgcccgaac ggacgagtgt gtcgcagatt tccaaagcct gttcgccggt atcgggctgg
      781 gacaggtaaa gctcttcgac ttttacgccg agtttgcggg cgtaaacggg atcaaaggcg
      841 tgttcggcat cgacaaaggc gcacacgccg ccgtttttct ggcattgggc gacggcttcg
      901 aggcagaggg tggttttgcc ggaggattcg gggccgaaga tttcgacgat gcgcccgcgc
      961 ggcagaccgc cgactccgag ggcgaggtct aatccgagcg atccggtgga aatgacttcg
     1021 aggttttctt cctgctggct gccgtccatt ttcatgatgg cgcctttgcc gaaacttttt
     1081 tcgatttgcg ccagtgcggc ggcaagggct ttgcttttgt cgtctgacat tggggttact
     1141 ccggaacaaa tgcggtatgt aggatgcggc gcaacacggg ctgcggcgcg ggatgtgtat
     1201 cgttttcccg atgtgcgggc tatcggtaat gctgcttcac gaggttgcca ttatcgcata
     1261 tttccttgct tgccgatatg cggcaggacg cggcggcttg tgccggaatg gaatctggat
     1321 gccgtctaaa aggcggccgg ctttgttata atggcggctg ttttttctgt gtgtgcctgt
     1381 tttatgtgtt cctgccttgt tgtcaaaaat accgttatcg gaagcggacg caccaaaatc
     1441 gccgtgccgc ttgtcgcccg cgatgccgcc gaactttccg ccgtacttga ccaaatcaaa
     1501 aacctgccct tcgacatcgt cgagttccgc gccgattttt tggaatgcgc gggcagcatc
     1561 ggcgaagtat tgcgccacac gcagaccgtc cgcgacgcgc tgcccgacaa gccgctgctg
     1621 tttacgttca gacggcatgg cgaaggcggc gcgttcccgt gttcggacga ttattatttc
     1681 aaactgctcg acgcgctgat cgaaagccgc ctgcccgaca tcatcgacat cgagctgttt
     1741 gccggcgaaa ccgccgtccg gcgcgccgtg gcggatgctc aaaaaaacgg catcgccgcc
     1801 ctgctctgca atcatgagtt tcaccgcacg ccgccgcaag aagaaatcgt atgccgtctg
     1861 aaacagatgg aggactgcgg cgcggacatc tgcaaaattg cggtgatgcc gcaaagcgcg
     1921 gaagatgtgc tgactttgct ttccgccacg ctcgaagcga aacggcttgc cgccaaaccg
     1981 gttgttacga tgtcgatggg gcagacgggt gcggtcagcc gccttgccgg acaggtgttc
     2041 ggctcaagca tcacgttcgg ttcgggaacg caaaactccg cgccggggca aatcggcgta
     2101 tccgccctcc gtgcggcact cgactgtctc gaaagcggcg cagactgatt tcagacggca
     2161 tcaaaacatg atgaaactca atccccaaca gctcgaagcc gtccgttacc tcggcggtcc
     2221 cctgctcgtc ctcgccggcg ctggcagcgg caaaaccggc gtgattacgc aaaaaatcaa
     2281 gtatttgatt gtcaatgtcg gctatctgcc gcataccgtt gccgcgatta cctttaccaa
     2341 taaagccgcc gcggaaatgc aggagcgcgt cgccaaaatg ctgcccaagt cgcaaacgcg
     2401 cgggctgacg atttgcacgt tccattcttt gggcatgaag attttgcgcg aagaggcgaa
     2461 ccatatcggt tacaaaaaaa acttctccat tctcgattct accgacagcg cgaaaatcat
     2521 cggcgaactc ttaggcggta cgggcaaaga agccgtattc aaggcgcagc accagatttc
     2581 cttgtggaaa aacgatttaa aaacgcctga agatgtcgtt cagacggcat cgaacatttg
     2641 ggaacaacaa accgcacgcg tgtatgcgag ctatcaggaa accttacaaa gctatcaggc
     2701 agtggacttt gacgacttaa tccgcctgcc tgccgtgctg ttgcagcaaa acagcgaagt
     2761 gcgccacaaa tggcagcggc ggctgcgtta tctgctggtt gacgaatgcc aagatacgaa
     2821 tacctgccaa tttacgttga tgaaacttct gaccggcgcg gaaggtatgt ttaccgccgt
     2881 cggcgacgac gaccagtcca tctacgcatg gcgcggtgcg aacatggaaa acctgcgtaa
     2941 aatgcaggaa aactatccgc agatgaaggt catcaaactg gagcaaaact accgctccac
     3001 cgcgcggatt ctcaaaatcg ccaacaaagt catcgaaaac aaccccaagc tgtttaccaa
     3061 aaaactttgg tcgcaattgg gcgaaggcga gccggtcaaa gtcgttgcct gccaaaacga
     3121 gcaacacgaa gccgactggg tcgtcagcca aatcgtcaaa caaaaactca tcggcggcga
     3181 caaaacccaa tatgccgatt tcgccgtgtt gtaccgggga aagcatcagg cgaggatttt
     3241 cgaggaagca ttgcgcggcg cgcgcatccc ctaccgtctc tccggcggac aaagcttttt
     3301 cgacaaagcc gaaatcaaag acgtgttgtc ttatgtgcgg ctgcttgcca accccaacga
     3361 cgatcccgcc tttctgcgtg ccgttaccac gcccaaacgc ggcatcggcg atgtaacgct
     3421 gggcaagctc aacacttacg cgcacgaaca cgaatgcagc ctgtatgaag ccgcgcaaaa
     3481 cgaagaagcc ctcgccacgc tgaacaatac caaccgccaa cacctgcaag cctttatgga
     3541 tatgttcggc agttaccgtg ccaaagccga aaccggcgaa gcgggcgagt tcatcaacag
     3601 cctgctcgaa gaaatcgact atgaaaacca cctgcttgcc agtgaagaag gcaaagctgg
     3661 cgaaatcaaa tggcgcaacg tcggcgattt ggtatcatgg tttgcgcgaa aaggcgggga
     3721 agacggcaaa aacatcatcg aactcgccca aaccgtcgcc ttgatgacgc ttttggaagg
     3781 aaaagacgaa gaagaaaccg atgccgtctc gctatccacg ctacacgccg ccaaaggttt
     3841 ggagtatccg tatgttttcc ttgtcggttg cgaagaaggc gttttgccgc acaacgacag
     3901 catcgaagaa ggcaacgtcg aagaagaacg ccgcctgatg tacgtcggca tcacccgcgc
     3961 caaacgccaa ctcacactga cccactgcgt caaacgcaaa aaacaaggca catggcagtt
     4021 ccccgaaccc agccgattca tagacgaaat gccgcaggaa gatttgaaaa tcctggggcg
     4081 caaaggcggc gaaccgattg tcagcaagga agaaggcagg cgcaaccttg ccgatataat
     4141 cggaaggctc gacaacctaa aaaaaagcgg cgcggcggat taaaccggag ccgcaatgcc
     4201 gtctgaaggc ttcagacggc atattttttg gacggcgcgc gtaaagcggt ttacgcccac
     4261 aaatcctgct gctggttttt cggcacaaga tgccccacgc cgataccgat aaggcggaac
     4321 gcgtcttccg tctgcggcgg gacgcgcgcc atcaacattt gcgccgcctg aagcagggag
     4381 gcgcagtcgg gcaatacgga ggaataagtc agcgtgcgcg tgatgatgcg gaaatcgtag
     4441 gtcttcagct tgagcgttac actttgggct tcgacgtttt tgcgcgtgat ttgccgccac
     4501 aagtcttcgg caagatgggg caagtgtccg gcagcctgct cgagcggcag gtcttcgggc
     4561 agggtgattt ctgtggagat ttggaggcgt tcgcgttcgg ctttgacggg gcgttcgtcc
     4621 gtaccgcgcg ccaaatcata gaggcggtag ccgtagcgtc cgaaatggtt taagagctcg
     4681 ccgcgctcga aacggcgcaa atcacccgcc gtctgcatac ccagcgactg catttttttc
     4741 agcgttacct tgcccacgcc ggggattttg cccaaaggca gggtttccaa aaatgccatg
     4801 actttgtgcg gcggcaacac aaactgcccg ttcggcttgc gccagtccga cgcgattttc
     4861 gccagaaatt tgttcgacgc gatgcccgcg gatgcggtca aacccgtttc cgcaaaaatg
     4921 gcggcacgga tttctttggc aacttcactg tcgtaaggga tgtttttgaa attacgggta
     4981 acgtcaagat aggcttcgtc cagcgacaag ggttcgatta aatcggtata acgcctgaat
     5041 acggcgtgaa tctgcgcgga aacctgacgg tacaaatcga aatgcggcgg cacatacacc
     5101 gcttgcggac acagcctttt cgccgttgcc accgacatcg cggaatgcag cccgaactgc
     5161 cgtgcctcat acgatgcggc gcaaatcacc gaacgcgcgc cctcccacgc gacgaccacc
     5221 ggccgccctt tcaaatgcgg ctgttcgcgc agctctaccg atgcgtagaa tgcgtccatg
     5281 tcgatgtgga taattttgcg tgaagacatc ggctcttctg aggataaaag ggatattcta
     5341 ctgccggcat cgggcaaatt ccaaatatac gccccgatag gcctgcctcc ataaaaatgc
     5401 cgtctgaaac ataccctgtt tcagacggca tccgcaaaac tacggttttc aattaaaact
     5461 gccaatccag tttcatgctg acagtgcgcg gttctccata gaagttgttt gcgccgcgcg
     5521 tacggttgta gttgttctca aaataagtgc gtccgtttaa gttcgtaccg atgaggctca
     5581 atttagcgtg tttgcccaat tcgtaacgga cgaaaccgtc tatcagcccg tagccgccct
     5641 gcctgatgtt gtacaggctg cttgtgccgc tttgtgcgga cacgccgccg ccgacggtca
     5701 gccccgtatt cggtatatgg aagctcgttc cgaaacggaa tatgtgcacg ggtgtgaaat
     5761 tgctgaagtt gtacgggtct gcgcctgtgt ttttggcgag gcgttcggcg ttgacttcgg
     5821 cggcgttttt gtagcggctc ttgttgtagg tgtaacccgc aaagactttc caatcttcgt
     5881 tcaactcacc cgacaactcg gcctccgccc cacggctgac cactttgcct atcggtttgg
     5941 caacggtttg gaacgacccc tgcttgccgc ctgctccggg aacatagcca aaatcgacga
     6001 ccgtgcggtt tttctgttcg aggtaaaaca atgcgaacga agcattcagc cgtccttgca
     6061 agaatgcgcc tttccagcct acctcatagt ttgtgccgac caaaggcggc aaaacggttt
     6121 tggcactgac atcgacatta tcctgctgtt tgaagatttt ggtataactt ccgtaaatac
     6181 tctgttgcgg tgtcaagtca taggtgatgc ctgcataggg cgtcaattta tgaccttgca
     6241 tcttggccgt gtaatggtcc tgatccgcct taatactcga tgctgtctga aaatcgcttg
     6301 ccggctgccc atagcggaca ggcatatctt tggtttgcga ggtttcatag cgcgtgtagt
     6361 gcagcccgcc caaaaggtgc agtcggccgg ttacgttgaa acgcgtgctg gcagtcagcg
     6421 aatgggtttt gttggtgttg aggtatttgg cgtagttata cagcgcagga acatggtcat
     6481 cggccacttt aacagttttc caaaccggca ccgtaccgga aaaaccggta aagacaggcg
     6541 agccgtcggg attggtctcc tgaatcttgt tgcctttttc gtccagctca tatacatcga
     6601 catataccgg tgtccggctg ccgctgtatt cgtcatagta atacacctgc ttgccttcgg
     6661 catcgagctt gggctcggtt tttattttct tggcattcct gcattcttcg gcataaacgg
     6721 tacggttgcc tttttcatcg tacgcctgcc aatcgggttc tttatgcccc ctgaccaaag
     6781 gagaagacaa atcaccgtcc ggctcccctg acaacttccc gcatacacgc cgtgcgttgc
     6841 ccctgtattc ggacgtactc tgtggcggcg ttcgtagatt tccagatatt cggaacgtat
     6901 cttttcatcg ccgtaggcat agccgacaaa gaaatcatgc tcccgcccga acagcccata
     6961 tgtgccggtc aggtcaagtt taattcccca ttggcggtcg tctttggtat gccgcaacgg
     7021 catataactg tatcgtcggt tggcggtagc cttccgatta aaggaagagt catacaggct
     7081 gtttggaaaa cgttgtgccg cattattaaa gatgccttcc ttcgcaaggg ctttatcgac
     7141 aaattccgac ttgtcggcat caacacccgg atccccccaa gaaccttgac agataaagtc
     7201 cagcgcaaaa ggggcactca tacactcgtc aaaaccggct ttgcgttctg cggcacggcg
     7261 gctgcggtac tgctcgaaag cagtattatc gaaacggttt ttaacaaaat cgtctttgcg
     7321 ctcacggtat tccttggcgg tttcgtcacg atatgctttc agtttctcca atgccttatc
     7381 tttcggctcg aacgggatga cttcgttttt ttcggtcaaa aagcctaccg catcctcatc
     7441 tgacaaaccc gccgcatgtt cgtttttcag aaaaaactgc cccaccttcg catcggattc
     7501 attcttggta taagacactt cggcattgag ctgccaaccg ttgtcaaaca catgtttgaa
     7561 acctgagaaa aggttgtatt tgtcagcact caaccgcgac caatcctccc ccaaataagt
     7621 gttgcgcggc agttgcaaag gccggttgca ggcaggcgtt gaactgaacg gggcagtttt
     7681 ctgattttca caggacaaaa taatgcccga aaaatcagga acctccctac tcttctgata
     7741 catgccgccc aaagtaagca cactgctgtc gcccgcatcg gcttcggcaa tgccgtaaac
     7801 catatgtttc ctgccccaaa cgcggtcttt aaacgatttt ttatactctt ccgcacccac
     7861 caaccttccg cgtaaggtat tcgccttatt caggctgcct gaaacatcca acactgcacg
     7921 ccggctgccg cgatggtcgg cggtcagctc tccggtatgt ttgaaagaag cggtaggtcg
     7981 cttacggatc aaattgacgg ttccacccgg ctctgaattg gattgggtca accccgttgc
     8041 accccgtaca acttcaatat ggtcataaac cgccaaatcg gtactcggag acacgtcgat
     8101 tttcgccgta tatcccgaac ggcctgcaac attgacggta ataccgtctt caccaatctg
     8161 atcaatatag aaaccgcgtg acaaaaaccg cgtctgcaag cctgaatcgc gcacaacgtt
     8221 gacacccgtc gtgtttttca ttgcctcttc aagcgtatgc accgccttat cgtcaaggcg
     8281 gctgcgcgtg atgacgctga ccgactgcgg cgtatccttg cccgcaatcc tcatacctgt
     8341 ggcggtggac atccgatcta tcgtataaga acgggtcttc tcggtcttgc ccgacagagc
     8401 atgagagccg cgtacattga ccgtatccag actgacggta ttgccgtctg aaacaggcac
     8461 aacaccgtct gcaaaagaac caccgtaagc cgataacagc ataacggtca gaattttaag
     8521 tgaaaaatga ttttgattca tagagacctc tgtaatatgc aagtgtgcaa atcgtccaaa
     8581 gaccctcaca actgttttga ttttttatat taattgaaaa aaagtaattc tcaattaaat
     8641 ttatagatgg gattgtattc ccattttgac aaaaaacaaa ctgctcctta ccgtttattt
     8701 caaaaaacga taatattgta ttgaaaaata tccgaattta aatacagatc gtcaatgcgg
     8761 aaaaaaacac ccaaattggc tataatcccg acaaacacac tcaaggacaa caacatggca
     8821 gcctcgcccg aagcaaaatt cactgaagaa aagattttgt gggtcaaaca ccacacgccg
     8881 aaactcatca ctttcgccat cagccgtcca gaatcctacc gttttaaagc cggacagttc
     8941 tcccgactcg gtttctacga aggggaaggc tttatttggc gtgcctattc catcgtttcc
     9001 gcagaatatg ccgacacgct cgaatatttt gccgtactca tccaagacgg ccccatgtcg
     9061 atccgtttcg ccaaaatgca acagggcgac accatcctgc tcgataaaaa tgccaccggc
     9121 ttcctcctgc ccgaacgctt ccccgacggc aaggatttgg tgatgctctg caccggctcc
     9181 ggcatcgccc ccttcctttc cattctcgaa caacccgaaa tccggcagcg tttcgatacc
     9241 gtcaacctga tacattccgt atcttttccc gaagaattga ttttcaacga ccggctcgcc
     9301 gcattgtccg aacaccccct ggtaggcgaa tacggacact cgttccgttt cgtccctgtt
     9361 accacccgtg ccgccaaccc ctcgggctta agcggaaaac gcattccgga actcttaaaa
     9421 aacagcagca tcgaacaggc gctgcatacc aagttcaccc cggaatccac acggtttatg
     9481 atttgcggca acccggaaat ggtcaaagac actttccaaa cgctgctcga catgggttac
     9541 gtcatgcacc gcaaccgcat tcccggtcaa atcatgatgg aaaacggctt ctaaaaacca
     9601 ccctgcttgt ccgatgcctt cggatggaag ggcaaaccga cacggcacga aaaccgcgtc
     9661 ggtaaaaatg ccgtctgaaa aaattcagac ggcatcttcg gacacattac ctgaaacggt
     9721 aacacattcc aacccaaacc gatcaggcaa tcaatacgaa cgactgttta catacttacc
     9781 ggctttcacc aaccggtatt gatttaaccg atttccttaa tatttttcct gtccgtttta
     9841 aacttcgcct taaacacatc cggtaaatct ttatcgaaat accaaagccc gtcatccatt
     9901 tccaatgcgc cgcccattcc gtgcagaacg actgttttcc ccgtcagcgg atcggtttcg
     9961 gtaatttcca cttcgtgcat tttgccccaa tccaaaacag gcaacttgtg tgcaaacgcc
    10021 aaaacctgtt cgtcagagcg gtcgcacgcc ttatcgcatc ggcctgaaac atatacggga
    10081 caaggctcat cctctgcata accgtccgga aggataccgg ctgaggcagg acacaatccg
    10141 tatgtttccg cccacgacga caaagcccgt ctcgccgcct ttttattgga aaataatccg
    10201 gtaggcggat tatccgtcac accgtttttc aaagccgctg ttttcgcatt caacatgccg
    10261 tctgaacctt tttcaaacct gacggtcgta aatgttttaa gcagattttt ggcagatacg
    10321 taacaatcca ccccataatg cctgaccaat tccgctttaa ccttatgggc atgcagcctg
    10381 cccaatgcgg gaaaaaaacg gacttcctcc gtattgcacc aatcaaacgg ggcttttccg
    10441 gagtccaata aagccgaaac ctcgctatat acccgttcaa acgtaccgat gtaatttact
    10501 ttccctccgc cgtcgaaaca ggccagcacc cccataccgt caggcaaacc gtacaactgt
    10561 tccctcaacc gttcgggcag cgcggcaggc aacggtttcg gattcatcaa acggaaacac
    10621 tgcctgatcc atgcctcgac cccgtgttcc gacagactgt attccaaata atcgcacaat
    10681 gccgatacat ccgccatcgc acgatgcctg tcttccacaa caatccccaa cctttcgatg
    10741 atactgtcca ggctgtgctt gtaaaattgc ggatacagac accgggacag ttgcacactg
    10801 cacaaagcag gcgatgaaaa tccgataccc gcacgatgaa actcatgctt taaaaacgta
    10861 tagtcgaaac ggctgttatg tgcaaccagc acacaaccct tcaataccga aaacaactcg
    10921 ccggcaatct ctgcaaaaac aggtgcgtcg gcaaccatgc cgtctgaaat ccccgtcagc
    10981 cccgccacaa actgcggaat cggtttttga ggattaacca accactcatg cctcaccacc
    11041 cttccctgct caaacttgac caaagccact tcggttaccc tgtcttcata cagattgccg
    11101 cccgtcgatt ccaaatcaac cacggcaaca ggcattccaa accgtaaaaa tgccttttcc
    11161 agcaagggcc aacgggaagt aacaatcatt ttattctctt taaattcaaa caacaaaccg
    11221 atattttaca cttttgaggc atttcatcca acaaaacaat tgacagaatc cgatgattac
    11281 cctaaaattc aaatctttct tgcagcgcac ccgtagctca gttggataga gtatctggct
    11341 acgaaccaga gggtcgggcg ttcgaatcgc tccgggtgcg ccagtaagaa aatacaatat
    11401 gcgcccatcg tctagcggtt aggacatcgc cctttcacgg cggtaaccgg ggttcgattc
    11461 cccgtgggcg tgccaaattc caaatccccc gaaataatcc ctcggggatt ttttattgcc
    11521 tcggcaattc attaccatat ctttacctac ccccttcatc agactctcag acgtaatcga
    11581 atcatattca aacctttgcc gtgcaaaccg atatcacgta accggatgcg gtgtccgtcc
    11641 aacattttac ccgattgaaa cgcctgatat attgcacccc atcaacgtgg cattactttt
    11701 cttaacaatc ccctttgaca gcaactgact agggcttttt tatgccatca tcaaatttat
    11761 agtggattaa ctttaaacca gtacggcgtt gcctcgcctt tccgtactat ttgtactgtc
    11821 tgcggcttcg tcgccttgtc ctgatttttg ttaattcact ataatatttt ctctcccgat
    11881 tgaaacaggc gtaacagaat atgcccgaag ctccggctgc tttcttgttt accgccgcga
    11941 tatttagagt ataataccaa atttgagcaa tagttctaaa acagttagaa ccatttttca
    12001 tgagcctgac tgattcgtat actcggagaa actgatgcaa aatatttttg accctttggt
    12061 tattcgtgga aaatccctta cccccatcgt gcaaggcggt atgggggtcg gtgtttccgc
    12121 atcgggttta tccagcgcgg tggcacgtga aaacggtatc ggaacgattg ccagtgtgga
    12181 tttgcgccac cttcacgaag acctactcgc cgaatcacaa atcaatccga gtgaagagaa
    12241 atatacatct ttgaactgta ccgcattaga cagggaaatc caaaaagcca aaagcgcttc
    12301 agagggaaaa ggactgattg cggtcaacgt gatgaaggcg gtcaaagacc acgccgcgta
    12361 tgtccgccag gcttgcgaat caggggcgga tgcggttgta atgggtgccg gcctgccttt
    12421 agacctgccg gaaatgaccg agggctatca taaagatgtc gcgctgctgc cgattctgtc
    12481 cgaatcgcgc ggtattaata tcgtcttgaa acgttggatg aaaaaaggca tattgcccga
    12541 tgcgattgta gtcgaacatc ctgcccacgc ggccgggcat ttgggcgcgt caaccgtcga
    12601 aggcgtaaac gatgctaaat tcgacttcaa acgcgtgatt gaggaaacgt ttgaagtttt
    12661 caaaagttta gggctggaaa gcgaaaaaat cccgcttatt ttggcaggcg gtatggcaaa
    12721 ctttgaaaaa gtcaaaaccg ccctgaaaaa ctggggagca tccgccgttc aaatcggtac
    12781 ggcttttgcc gttaccgaag aaggagatgc gcaccttaac ttcaaaaaaa cgcttgctgg
    12841 tgcggaaact gaaaaagtag tcgaatttat gtctgttgcc ggtttgccgg cgcgcggcgt
    12901 acgtaccaaa ttcctagaca gctatatcag gcgcgaaggc aaacttcagg caaacgccaa
    12961 agccgacccg cgccgctgca cccaaggatt aaactgcctg accagctgcg gcctgcgcga
    13021 cgggctttcc aaagcagggc aattctgtat tgatatccag cttgctgccg cattccgtgg
    13081 agaagtggat aaaggcctgt tcttcagagg taaagaccct cttcctttcg gcaatgccat
    13141 ccgcaccgtc cgcgagacga tacaatatct gctgacgggg agcgaacctg ttgcaacgct
    13201 cggacgctga catcaggtag gatttgattt gcaaacaaaa tgccgtctga agggccttca
    13261 gacggcgttt ttcaggctgc gtttcggaat agtgtcgaaa aaacggagag aaataaaaac
    13321 gtttttatgt aaacaaaacg ccttccgcat tgtgtcgggc atacaacaca aatgccgtct
    13381 gaagcccttc agacggcatt tttcaggctg catttcggaa tggtgttaaa aaataaacgg
    13441 gataagatac atttattttc gtccgataaa tcagaccatc acgccgaata atcaaacaat
    13501 gcctgcccga cattgcatct ggcaaaccaa tgcaatgaaa acacggcttt tttatttgct
    13561 tccggcatta ttgaaaagtt tatccatcgg ggtcagatcc accgcattgc cttggctggt
    13621 aatccatttg ttctcgacgc gccacacgcc tgccgcgtcc tccacgcgca cataccagtg
    13681 gttggtcggc gaaagggttt tgaacaccgc ctcatattcc gccctgccgt tctgcgcgct
    13741 gccgacgggc ttgagggcga cggtttgatc gtccgccttg cgggtcgggt gcatcagcag
    13801 caggttcaaa ggctgtttgc cgtcaaactc gccgccgaca aacacttttg ccgcattcat
    13861 atcgggggaa atgagaacct gcaccccgat atgccgtctg acggcttctt catcccgatg
    13921 aagctggatg tcgatatgtt tgccgtcttt ataataatcg tccgtaacca aatctgtcgc
    13981 gtgctgctgc gcgacaaaaa acatagcgac gctggcgatg acgacaaaaa tcggccccgc
    14041 catcaagatc cacggccaga cgtgtttgta ccaaggtttg attggagtgt tttgagacac
    14101 ggttattctc cgataaaggt tgcatcttct tccaagacga ccggcttgcc gtcgggcgcg
    14161 ccgctttcgc ggtattggaa ggtaaattcg atagggtggc tgcctttgtc cgcgtattcc
    14221 ggaatggtgg acacttggac gggaagggtt accgtttcgc gcggggcaac cttgataccg
    14281 ccttcgggca gcccggtcag ggcgatttcg tcaaagcctt tgacacttgc ggtaatgagc
    14341 tgttcttttt cacttttgtt gatgatacgc aggctgtatg cgttttccag ccagcctttg
    14401 gcgttttcgc gcaccagtac gccacggtct ttcaaaatat cgacctcgac cattttgcgc
    14461 gtggacaaac cggccaggaa ggcaatgata actaacgcca acaccgcgcc gtaacctgcc
    14521 acgcgcggtc tgagcagccg ttttttaatg tctttttcag aatattcgtg ttccagcgcg
    14581 ctttcggtcg tataacggat taatccgcgc ggatagccca ttttgtccat aatctcatcg
    14641 cacgcgtcga tacaggcggc gcagccgata cattggtatt gcagaccgtt gcggatgtcg
    14701 atgccgacgg ggcagacttg gacgcacatc gcacagttga tgcagtcgcc caaacccgcc
    14761 tcttccttat tgaccgtttt cttgcgcgcg ccgcgcggtt cgccgcgttc cgcgtcataa
    14821 gaaacaatca gcgtgtcctt gtcgaacatc gcgctttgga aacgtgcata cggacacata
    14881 tgcaggcata ctttttcacg cataatgtgg gcgaagaaga aggtcataaa gccgtaaaac
    14941 gctgcggcaa acatcgcgcc gccacctgct gctccagtga ataaatcggg aacgaactgg
    15001 cggataggga caaaccagcc tgcaaacgtg atgcccgtcc acgcgcagac aaggaaaatc
    15061 agcaggtatt tggtggcttt gatgcggatt ttagtgaaat tccacggcga tttttccagt
    15121 ttcagccgtt tgtttctatc gccttcgacc aggttgtcaa tccacagcat aatttcggtg
    15181 taaaccgttt gcgggcagga atagccgcac cacagtcgcc ctgcaatcgt cgtccaccaa
    15241 aacagcccga aggcgcaaat catcagcagc aaggcaaggt aaatcaaatc gcccaccccc
    15301 aacgacaatc cgaaaatgaa gaaatgccgt tcggggatat tgaaaacgac ggcctgcctg
    15361 ccgctccagt tgaaccacgg aatgacgtaa aacacaaact gcgtcgccaa tacggcggcg
    15421 atacgcagtt tggcgaaccg tccttccgcc tttttgggat ggatgcgttc gccttcggga
    15481 tggatttgaa tcacgctgac tcgcggatcg aatgtttttt ttgctttcgg cgcggctttt
    15541 gtttgttcgg acgtgccgat tccggatgcc ggactgccgg cttggttttc cgtggtcatt
    15601 ctgcattcct tagatttttg attgatggtt tgcccgttac cgccgccgtt tgcttttcag
    15661 acgtcatttt tcttgttttt taaggcgttg tgtttcaagt tttgagaaaa tccgtttttc
    15721 ccaaaatata tttccgctat tgtacaactt tatgcgccgt ccggatgtat ggggcggata
    15781 catttcccat ccgcatcaaa acgcctggat tttaccttac tgcccgaaca aaatccgaat
    15841 acggttaaaa aaaaagacta aaaaaaccga cacccccata tcggcagaac cgacggtgca
    15901 agctcataaa caaacgctat cgacaatccg gcacacaatc tataactttt tatttcaaaa
    15961 ggaataatgg caggcttcgc ccgcaaatcg aaaatccttc cccaccggtc tcctgctgcc
    16021 gccttccccc gcgtccgccc ttttcttgaa agcataagcg aatcgggcga taatcaacgc
    16081 tttccgatta tccacttatc cgaaacacca gcaaggaaaa tacaaaatgt ctcaactggc
    16141 aaacgcaatc cgcttcctct cggccgatgc cgttcaaaaa gccaattccg gccaccccgg
    16201 cgcgcctatg ggtatggcgg aaatggcgga aacattgtgg acgaaattcc tcaatcacaa
    16261 tcccgccaac cccaaattct acaaccgcga ccgcttcgtc ctctccaacg gccacgcgtc
    16321 tatgctgttg tacagcctgc tgcacctgac cggctacaat ctgagcattg aagacttgaa
    16381 aaacttccgc caactgcaca gcaaaacccc cggccatccc gaatacggct ataccgacgg
    16441 cgtggaaacc acgaccggcc cgttggggca agggattgcc aacgcggtgg gcatggcatt
    16501 agccgaaaaa atccttgccg ccgaatttaa taaagatggt ttgaacatcg tcgatcatta
    16561 cacctacgtc ttcatgggcg acggctgtct gatggaaggc gtatcgcacg aagcctgttc
    16621 gctcgccggc actttaggct tgggcaaact gattgttttg tatgacgata acaatatttc
    16681 cattgatggt aaagtggacg gctggtttac cgaaaacatc ccgcaacgct ttgaaagcta
    16741 cggctggcac gtcgttccta acgtaaacgg tcatgacacc gccgccattc aagccgccat
    16801 cgaagccgca cgtgccgaaa ccggcaaacc gtccatcatc tgctgcaaaa ccttaatcgg
    16861 caaaggcagt gccaacaaag aaggcagcca caaaacccac ggcgcacctt tgggcgcgga
    16921 cgaaatcgaa gccacgcgca aacatttggg ctggacttac cccgcctttg aaatcccgca
    16981 agaaatttac gatgcgtgga atgccaaaga acaaggcgcg aaactggaag ccgactggaa
    17041 cgaactgttc gcgcaatatc aagccaaata tcctgccgaa gccgcagaat ttgtgcgccg
    17101 tatggataaa aagctgccgg acaatttcga tgaatacgtt cagacggcat tgaaagaagt
    17161 gtgcgccaaa gccgaaacca tcgctacccg caaagccagc caaaacagca tcgaaatctt
    17221 ggcaaaagag ttgcctgaat tggtgggcgg ttcggccgac ctgaccccgt ccaacctgac
    17281 cgactggtca aacagcgtct ccgttacccg cgacaaaggc ggcaactaca tccactacgg
    17341 cgtgcgcgag ttcggtatgg gtgcgattat gaacggtctt gccctgcacg gcggcatcaa
    17401 accattcggt gcgaccttcc tgatgttcag cgaatacgag cgcaacgccc tgcgtatggc
    17461 ggcactgatg aaaatcaacc ctgtatttgt gttcacccac gattccatcg gtttgggcga
    17521 agacggtccg acccaccaac ccatcgagca aaccgccacc ctgcgcctga ttccgaatat
    17581 ggacgtatgg cgtccgtgcg acaccgccga atctctggtg gcttgggcag aagccgtcaa
    17641 agccgccgat catccgtcct gcctgatttt cagccgtcaa aacctgaaat tccaagcgcg
    17701 cagcgaacaa caactgaacg acatcaaacg cggcggctac gtcatcagcg aagcccaagg
    17761 caacgcccaa gccgtcatca ttgccaccgg ctcagaagtc gagctggctt tggaagcgca
    17821 aaaagcactc gccgcgcaaa acatcgccgt acgcgtcgtt tccatgccgt ccaccaacgt
    17881 attcgaccgc caagacgccg cctatcaagc cgccgtcctg cccgaaagcc tgccgcgcat
    17941 cgccgtagaa gccggccacg ccgacggctg gtacaaatat gtcggactga acggcgcagt
    18001 cgtcggcatc aaccgcttcg gcgaatccgc ccctgccgat ttactcttca aagcattcgg
    18061 ctttaccgtg gacaatgtgg ttgatacggt gaaatccgtg ctgtaacccc acacctaaac
    18121 aaatgccgtc tgaacgcttt tcagacggca tttttttgcc ctcccgcctt gatgcttcct
    18181 cattccgcca atctccatta taatatttgc gaatcactct tattcacatt tcaaaaggag
    18241 aaacgcatga gcacccgtac cgaacatgac accatgggca atgtcgaagt cccgtccgaa
    18301 gcctattggg gcgcgcagac ccagcgcagc cgcaacaatt tcaaaatcgg cggcgaaacc
    18361 ctgccgcagc cgctgattta tgctttggcg ctggtgaaaa aagccgccgc cgcgaccaat
    18421 gtttccctcg gcaggattaa gccggaacag gcggatttga ttacgcaggc ggcggatgat
    18481 gtgttgaacg gcaggcttga cggacagttt cctttagtgg tttggcagac cggctccggc
    18541 acgcagtcca atatgaacat gaacgaagtg ctggcaaacc gcgccaacga aatcgccggt
    18601 acgggtttgg cggcttatca gcccgtccat cccaacgacc atgtgaacca cgcgcaatcg
    18661 accaacgacg cattcccgac cgctatccac gttgccgccg cgattgaaat caaccgccac
    18721 ctcatccccg ccgtaaaagc cctgcgcgac acgttggaca aaaaagccca agctttcgcc
    18781 cctatcgtca aaatcggccg cacccacttg caagacgcga cgccgctgac tttgggacag
    18841 gaattttccg gctacgtttc ccagcttgat cacggtttag gccgtctgaa cgatgcgctt
    18901 aaagacttgt atgaacttgc tttgggcggt acggcggtcg gcacgggttt gaacagccat
    18961 cccgaatacg ccgaaaaagc tgctgctaaa ctcgccgaac tgtctggctt gccgtttgtc
    19021 agcgcgccga acaaatttga agccttaggc ggacgcgatg ccgccgttgc cgcttcgggc
    19081 gcattgaaaa cgctggcggc aagcctgaat aaaatcgcca acgacatccg ctggctggca
    19141 agcggcccgc gttgcggttt gggcgaaatc aaaatccccg aaaacgagcc gggttcgtcc
    19201 atcatgccgg gcaaagtcaa cccgacccaa tgcgaagcaa tgacgatggt gtgctgccaa
    19261 gtgttcggca acgacgttac catcggtatg gcgggcgcgt cgggcaattt cgagctgaac
    19321 gtctatatgc ccgttatcgc ctacaacctc ttgcaatcca tccgcctctt gggcgacgcg
    19381 tgcaacagct tcaacgaaca ctgcgccgtc ggcatcgaac ccgtaccgga aaaaatcgac
    19441 tatttcctgc accattccct gatgctcgtt accgcgttga accgcaaaat cggttacgaa
    19501 aacgccgcca aagtcgccaa aaccgcctac aaaaacaaca aatcgttgcg cgaaaccgcc
    19561 gttgagctgg gcttgctgac gggcgaagaa tttgacgaac tggtcgttcc tgccgatatg
    19621 gttcatccgc gctaatcttt ccctcaaata aaatgccgtc tgaaacctcg ttcagacggc
    19681 attttccgtt gcctgcgaac tagcggcgtt tgaacagcct gtcccccacc gccgccgtaa
    19741 ccgcaccccc gaccacgacc agtgcgccaa cataacccaa accgttcata tccggcgcgg
    19801 caaaagtatc aggcatcaca taatgcccga gcaaagaaaa tattacggta aacacgggga
    19861 gcaaggttgt taccgcgctg actttggaag cctcccaatg tttcaacgcc tcgccgaacg
    19921 agccgtaacc gattaacgta ttcaagcagc aatacgcaaa acaaacccac gccaacgtac
    19981 cgtccaaact tccgatgtgt gccggttcgg caaacggcag gaacacggcg gcacttgccg
    20041 cataaatcaa cagcagaatc tgttgcggcc cgaattgcgc cgacagcagc ttttgcgcca
    20101 cggcataaca cacccatgcc atactgcctg ccgcacacag caacacgccc ttcgcatacg
    20161 cgcccaaacc cgacaactcg ccgaatttat cgttaaaaaa cataagcaaa ccggcaagca
    20221 gcaaaaccaa gccgattttc tgagcggcag tcatccggtc tttaaacacc aacacaccga
    20281 caacaatcat cgtaaacggc gaaatctgcc acaaaacctg cgtcgtggtc ggcgaaatat
    20341 aatgcagccc ttgggcaatc agcacaaagt ttgccgaaat gcccgccacg ccgagcagca
    20401 gcagcctgaa tgagcaccaa gaaaaatccc gccgcttcgg cagccgcccg cccagtgcca
    20461 gcaaaacaaa caataccgcc gccgccacgg taaaacgcac ccacaccagc gtcggcgcat
    20521 cgacaaactt caatacctgc cgcacggcaa tcggcagcgt tccccacgtc atcgccgcca
    20581 aaagtgccaa cgcgaagcct aggagcggcc tttggttttc catcctgatt ttcctatttt
    20641 taaacaaccg tattgccgga cgatgccggt ttgccgcatc gggcaataat ggttcaagcg
    20701 tttggcgttt aattccaacc ctttgatttc aaacaaaccg gctgaagctc ggctattgct
    20761 tcgcgctatt tgaaaacacc gcctgaattt taaaatatag tggattaaca aaaaccagta
    20821 cagcgttgct tcgccttagc tcaaagagaa cgattctcta aggtgctcaa gcaccaagtg
    20881 aatcggttcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta
    20941 atccactata ccgtctgaaa acagcgtggg cctgcggcag gcatcactgc ctcaaaacgc
    21001 cagaacggcg caatcgcaac gttccgccca acgcaggggg cagcaacaag ccggcacaaa
    21061 tgcaaaaaag agaaaccctg ccccgtaagg tttaaggttt ctccgtcctt tatgatttcc
    21121 ctccgcgagg atgtgctgcc gtaaaattca gaacgggatg tcgtcgtcaa tgtcctcgac
    21181 cggggcggcg gcaggcacgg gttggcggcg cggcgcggct ggtgcttctt ggggatggga
    21241 cggcgcgtcg gaggcgggct gccggctttg ctgcgcgggg cgttggtaag cctcctgact
    21301 ctgaccgtaa ccttcctcgt aaggcgcacc gccgctgttt tcattgcgcc cgcccaacat
    21361 tttcatttcg ttggcgacaa tatcgtaagc agtgcgttcg atgccgtctt tgccttggta
    21421 tttgcggctt tggattctgc cttccagata aaccagcccg ccttttttga ggtattgccc
    21481 ggcaatttcc gccagtttgc ggtacatcgt gatgttgtgc cactcggtgc gctctacgcg
    21541 ctgaccgttg cggtcgttcc aagtttcgct ggtggcgacg ctgaaattgc agacggcttc
    21601 gccgttgggc atatagcgta cttcaggatc tcgtccgaga cggccgataa ggatgacttt
    21661 gttcaatgac attttttaaa ctcctgtgat gattttttca gcggcagcct gatcgaaacc
    21721 cttctgcaac actttgagat agacggtctg cctgtcgaaa ctgaaaccga tgtcttccac
    21781 gccttcgagt tgcgacaagg cgcattgtaa gccgtcctga ttgccctgcc acacgccgcc
    21841 gacagggtaa ctgaggtttt tgacgggctt gggcgcgggc gataaaacgg caattaccag
    21901 ccacagcagc atcaatatac tgcaaaaggc aaacacgccg gaaaagccgt atttttgaaa
    21961 cagcaaaccg cctgccgcgc cgccggcaaa cagtccgagc gactgcatcg tgttgtacac
    22021 gcccatcgcc gtacccttca ggtcggacgg cgcgattttg gaaaccatag acggcaggct
    22081 cgcttccaac acattaaaac cgataaagta aacaaccaaa taagcggtaa tcaagcctac
    22141 cgagcgcata ccggacagca aaccgagctg cgccgccgca atacagacga tacccaaaac
    22201 aaaaacctgc ttaagcttgt tgcgcgtctc gccgacgata atcagcggaa ccattaccac
    22261 caatcccgta atggtcgagg gcagatagac tttccagtgc tggatttttt ccaaaccgag
    22321 ctgggtcatc gcgaaaggca gcgcggtaaa caatgccatt tgcgcggcgt gcagggcgaa
    22381 aatgccgaaa tcgagcgtca gcagcctacg gtttttcaaa acttcgccta tgcgcgaagg
    22441 ctgcgcctgc gtatcttcgt gcagcttgga aacctccggg tcgggagtca tccacgccac
    22501 cacgccgata ctggcaacgg tcaaaatacc ggtcagcaga aacaagccgc gtacgcccac
    22561 cgcgtcggca atcacagggg caacgacgag gctgaccgaa aacgtcagac cgatactcaa
    22621 accgatcatc gccatcgcgc gggtacgtac gccgtcgcgc gtcaaatccg ccagcagcgc
    22681 ggtaaccgcc gcactgaccg ctcccgcacc ctgtatggcg cgtgcggcga ccagcatggg
    22741 cagcgtatcg gcggcggcgg caaggaagct gcccgctgca aacacaatca gcccgacata
    22801 aatggttttc ttgcgcccga acttgtcgga agcgatgccc aaaggcagtt gcagcagagc
    22861 ctgtgtcagc ccgtaaatgc ccattgccag cccgaccagc gttttgttgc cttccgcgcc
    22921 gggcagcgag gcggcataca ccgccaatac gggcagcacg aggaacatac ccagcatacg
    22981 cagcgcgtac acgccggaaa gcgtcgtact ggcgcgccat tcgtgcggaa acatttggat
    23041 gcggttatct cttgccatca tattttttca gacggcatca acagttgcaa tgccgtctga
    23101 acttccagtg aacagatttt cggattatac aggattcgcc gtatttcggt tgcggcgcgg
    23161 gttcaaaatc aacgccactg ccagcggttg cgccacgcgc ccaaaacggc gttcggatat
    23221 ttattgctgc ccaagctgcc gttaaagcgg gcaagcgcgc ggacgatgtt gcctttttca
    23281 agattccggt aatggcgcag gatggtacag ccgtaacgca ggttggtgcg gatgtcgaac
    23341 aggttgtgcg ccggtttgcc gatgtagttt ttccaaaacg gcataacctg catcaggccg
    23401 cgcgcgccga caccgctgat tgcatactgg cggaacgcgc tttccacctc aatcagcccc
    23461 aacataatct gcgtatccaa accggcccgg ctgctttcgt actggatatt gaccagcagc
    23521 ctgcgccgct cctcctcctc ggggacgaac cttgccaaac gtgccgacat ggcagacaac
    23581 caacgctcgc cctctttcgg attgtcaaac accagcctcg gcggattgac gctgccgaca
    23641 gaactcctca tcacggaagc cacatcgtcg gcaagcgttt cctcacgttg cgcgccggcg
    23701 tgcgccagag gactgagcaa caacgcaccg gcggcacaca acaggcggcg gcgttgcaga
    23761 ttaacgggta gggtatcggt cggttttttc atagggaacg ggggcgcgtc cggacgtttc
    23821 agacggcatt aaatattcaa acagacaatg attgcttcca acgcgaaaaa ccgcgcgcaa
    23881 aatccaagcg cggcatatcg ccctgccctt ttcgggcaaa cctcaattct accgccctca
    23941 agaacgcttg tccaaacagg cacaggcgac accgcccggg catttcccgt tttcaacggc
    24001 tatccgtcgt ccggattgtg cagcagcacc atcagcgcat cacgcttttc gggcggcagc
    24061 aggcggaaat atagtagatt aaatttaaac cagtacagcg ttgcctcgcc ttgccgtact
    24121 gatttaaatt taatccacta tatcttgag
//
LOCUS       DBBZYD010000020        23412 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.020, whole genome shotgun sequence.
ACCESSION   DBBZYD010000020 DBBZYD010000000
VERSION     DBBZYD010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23412
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.020"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(339..761)
                     /locus_tag="ACJJDL_000662"
     CDS             complement(339..761)
                     /locus_tag="ACJJDL_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HGG7573426.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(879..1550)
                     /locus_tag="ACJJDL_000663"
     CDS             complement(879..1550)
                     /locus_tag="ACJJDL_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HGG7573427.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPSGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QSAKP"
     gene            complement(1566..2192)
                     /gene="purN"
                     /locus_tag="ACJJDL_000664"
     CDS             complement(1566..2192)
                     /gene="purN"
                     /locus_tag="ACJJDL_000664"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HGG7573428.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNRETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCARYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDIAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2299..3105)
                     /locus_tag="ACJJDL_000665"
     CDS             complement(2299..3105)
                     /locus_tag="ACJJDL_000665"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7573429.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAASEPAAASAAQGDTSSIG
                     STMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMM
                     KFLQEQQAKAVEKHKAEAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQP
                     TKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYI
                     PSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3364..3804)
                     /locus_tag="ACJJDL_000666"
     CDS             complement(3364..3804)
                     /locus_tag="ACJJDL_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HGG7573430.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3867..5273)
                     /locus_tag="ACJJDL_000667"
     CDS             complement(3867..5273)
                     /locus_tag="ACJJDL_000667"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HGG7573431.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5443..6558
                     /gene="lptF"
                     /locus_tag="ACJJDL_000668"
     CDS             5443..6558
                     /gene="lptF"
                     /locus_tag="ACJJDL_000668"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HGG7573432.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6555..7625
                     /gene="lptG"
                     /locus_tag="ACJJDL_000669"
     CDS             6555..7625
                     /gene="lptG"
                     /locus_tag="ACJJDL_000669"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HGG7573433.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7935..10520
                     /gene="acnB"
                     /locus_tag="ACJJDL_000670"
     CDS             7935..10520
                     /gene="acnB"
                     /locus_tag="ACJJDL_000670"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HGG7573434.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10662..11657
                     /locus_tag="ACJJDL_000671"
     CDS             10662..11657
                     /locus_tag="ACJJDL_000671"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HGG7573435.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEIFESPASIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(11881..12894)
                     /gene="ilvC"
                     /locus_tag="ACJJDL_000672"
     CDS             complement(11881..12894)
                     /gene="ilvC"
                     /locus_tag="ACJJDL_000672"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HGG7573436.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVAANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(12974..13267)
                     /locus_tag="ACJJDL_000673"
     CDS             complement(12974..13267)
                     /locus_tag="ACJJDL_000673"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HGG7573437.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            complement(13334..13825)
                     /gene="ilvN"
                     /locus_tag="ACJJDL_000674"
     CDS             complement(13334..13825)
                     /gene="ilvN"
                     /locus_tag="ACJJDL_000674"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HGG7573438.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            complement(13836..15563)
                     /gene="ilvB"
                     /locus_tag="ACJJDL_000675"
     CDS             complement(13836..15563)
                     /gene="ilvB"
                     /locus_tag="ACJJDL_000675"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HGG7573439.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDTLGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
     gene            complement(16272..16356)
                     /locus_tag="ACJJDL_000676"
     tRNA            complement(16272..16356)
                     /locus_tag="ACJJDL_000676"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16320..16322),aa:Leu,seq:caa)
     gene            16632..17285
                     /locus_tag="ACJJDL_000677"
     CDS             16632..17285
                     /locus_tag="ACJJDL_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HGG7573440.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            17364..18017
                     /gene="hisG"
                     /locus_tag="ACJJDL_000678"
     CDS             17364..18017
                     /gene="hisG"
                     /locus_tag="ACJJDL_000678"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HGG7573441.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            18121..19020
                     /locus_tag="ACJJDL_000679"
     CDS             18121..19020
                     /locus_tag="ACJJDL_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HGG7573442.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            19017..20306
                     /gene="hisD"
                     /locus_tag="ACJJDL_000680"
     CDS             19017..20306
                     /gene="hisD"
                     /locus_tag="ACJJDL_000680"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HGG7573443.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            20352..21449
                     /gene="hisC"
                     /locus_tag="ACJJDL_000681"
     CDS             20352..21449
                     /gene="hisC"
                     /locus_tag="ACJJDL_000681"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HGG7573444.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            21446..22363
                     /gene="hisB"
                     /locus_tag="ACJJDL_000682"
     CDS             21446..22363
                     /gene="hisB"
                     /locus_tag="ACJJDL_000682"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HGG7573445.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPNARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            22458..23327
                     /locus_tag="ACJJDL_000683"
     CDS             22458..23327
                     /locus_tag="ACJJDL_000683"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HGG7573446.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQVGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
BASE COUNT         5698 a         6505 c         5823 g         5386 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactataatt caataaatta atatatggct taaaataacg
       61 ggattctcgc ctcccgcccg cccgcagaag caggcgggta tcattttaaa acgcggcatt
      121 taaaatttga ccgaaaattg ttgacaatcc ggaatcaagt ctgcacaata ccccgacaag
      181 tccaagtatt ataaaggctg aataaagagg aaacagcagg cagatatatt cgggaggtgc
      241 agtccgaata tatctgcttt tttatgcgcc tccggattgc ctgccgcacc tttcccttca
      301 gacggcatca gccgtttccc cataatgccg cccgatgcct atttatctgc cccggcaatt
      361 tcaaaactgt gggtaatctt tgccgctttg cccaacataa tcgaagccga acagtatttt
      421 tcggcagaca tctgaacggc gcgctcaatg gccgattctt tcaaatcatg cccgaatact
      481 ttgaaatgga tgtggatttc ggtaaacacg cgcggcgcat cgtccgcccg tttcgccgta
      541 accgtcgcac ggcagtcagt cactttctga cgctgttttt cagcaatcat caccacatcg
      601 atgctcgaac agcccgccac gcccaacagc agcatttcca aagggctggg cccgcgcttg
      661 gccgcacctt ctgccgccga accctccata acgacgctgt gcccgccttc cgtcgtgccg
      721 acaaagcaca ttccgtctat ccattttgat gtaacctgca tggtgtcatt cctgaaaata
      781 gcgttaaaac cgctttgcat atggcgttat tgtaaacaat ttcaagcggc ttatgcagaa
      841 atatggacaa aacggcaaaa aaacacttga aaaccgattt acggtttggc ggactggccg
      901 ttgatctgca ccgatttgag tttcagcgta taggttttgc cgtcgtcggt atagccgatt
      961 tgtgccggaa tattgttcag ggacggtgcg aagaaataca ttaccgtatc gtcgccgcgc
     1021 cgcacccgat atttgacgac ttcggtttcc acgccgccta tgctgtattt tcctgtaccc
     1081 gccttattca aaccgccgac ggaataaagt tttttgccgt tggtgatttt cagccccgag
     1141 gggagtttcg cgtcatttgc cgccaactgc caggcaagcg tgaacaaatc catagccttg
     1201 gggctttgct cggttttgct ctcgcccgct ttgccgtagg ttacgctgcc gtcggcgaat
     1261 ttggcttccg catacagttt gcccctgcgt atgtctctat agtaggtagg gtgcagggta
     1321 ttgccgacaa ccgtaccgcc ggactcgaaa cggatattgt atagcggcac tttaatcgtc
     1381 gaaacgattt tgtaagcatt gccgctgcgt tcaaatgtca tcgtggcggg aatgccgtag
     1441 ctgccggaat agtgcagcac ggcggattgg ggcagccctg ccgcatacgc gcacggcagg
     1501 gcggcggaca aaatggcggc ggaaaatata tttttaaaag tcttcatcat ttgctcccgc
     1561 ccggtttacg ccgtcaggaa acgggcggca tcggcgtttt ccgaatttct gacgcggttt
     1621 ccctcgataa tcaggcggcc ggcggcaaaa tcggcaacgg ctttcggata aagtttatgc
     1681 tcgacagcca aaacccgtgc ggcaatatcg tctgccgtat cgccgtcaag tatcggcaca
     1741 atcccttgcg atacaatcgg gccgcaatcc agttcggcag taacaaagtg aatcgtacag
     1801 cctgcaacgc ggcaacccgc ttccaaagcg cgttcgtgcg tatgaagtcc ggtaaacgag
     1861 ggcaggatgg acgggtgaat gttcatcagc ctgccttcgt aacgggcgca aaactcgggg
     1921 gtcagaatcc gcataaaacc tgccaaaacc accaagtcgg gttgatatgc gtcgattttt
     1981 tccatcatgg ccgtatcgaa ggcaagtcgt gattcaaagt ttttatgatt caggctatcg
     2041 gtcgggatgc cgcgttcggc cgcccattgc aaaccggcag ccgtttctct gttgctcaac
     2101 acggcggcaa tgcggacgtt gggaatggcg gcattgacga ttgcctgcat attgctgccg
     2161 cgtccggaaa tcaggatgac gatgtttttc ataatggtac gcttttgaaa gggatgccat
     2221 ctgaaccgct gtttggtggt ttcagacggc atttgccgta aaaatgcccg aaaacctgtt
     2281 tcgggcatgg attcggactt aatttacttt tttgatgtcg acttgagccg gctgcttggc
     2341 gggcgcgttt tcgggtgcgc cgattttgac cagtttcaca tcaaatacca aagtggcgtt
     2401 cgggccgatt ttgtcgcccg caccctgttc gcggtaggca aggttggacg ggatgtagaa
     2461 cgtggcttcg ccgccttctt tcagaagctg tacgccttcg gtccaacccg gaatcacttg
     2521 gctcaaaggg aaggtgaccg ggccgccgtt ggctttgctg ctgtcgaata ccgtaccgtc
     2581 aatcaggcgg ccttcgtatt ccacggtaac gatgtcgtct ttggtcggct gtttgccttc
     2641 gccctgtttg gtgattttgt attgcaggcc ggaagcagtg gtcttcacgc cgtctttggc
     2701 ggcattttct ttcagaaagg cttcgccttt ttctttattg gccttcgctt ccgccttgtg
     2761 tttttctacg gctttagcct gttgttcctg aaggaatttc atcatgactt cctgagcctg
     2821 ctcttcggtc attttgattt ctttgccgtc atacactgcc tgcatggctt cggtaaagac
     2881 tttcaaatcg atttccgcac cctgttcctt catttgcttc agggagcgtc cgatgtccac
     2941 gcccatcgca tagcttgcct gctgcatcgt gctgccgatc gaagaggtgt cgccctgcgc
     3001 ggcagaagcg gcggcaggtt cggatgcggc ttcttttttg ccacaggcgg aaagtgccaa
     3061 agcggcggaa agggtcagtg cgctgatttt gaaaatggtg ttcatgatgg atcttcgctg
     3121 tcgataaggt cggaaaaacg ggattatagc cgagtttgaa tgtttcaaca cacaggatga
     3181 cacataaagc gtcaatcgtg tgttgccctg ttttggaagg gattgaacct tccaaaataa
     3241 gttttgattc taccgccccg agggacagat gtccaagtgg cggggttcaa ccgataagga
     3301 aattttaatc aaatagaatc aagcctgttt aaattttgta aatgcggcat ttcagacggc
     3361 attttatgcc ttgccctcca tgccgtgatg ttcgatggca aaaccgcttc ggcggtaggc
     3421 ggtaaagcgt tcgcgcgcgt cggcgagatc ttccaagctg ttgccgacga tttccaaaac
     3481 gcgcgcgggc aagaccggag cggtgttcca aaaaccgtcg gacaggttca aaacagtcat
     3541 gccttcggga attcggggcg gattgccgcc gcaagcaagc aggacggatg tttcagacgg
     3601 catggcttct tccatttccc aaatttcgtg cggaatgaaa ctctcggctt cgtattgcca
     3661 aagcattttg tccaattcct gaagccgccc gaacgaatcg gaccacacca gtatcctgcc
     3721 gccgtcccga atcgcacggg caatcaggcg gcaggtgaaa atcggaactt gggcaacgtg
     3781 cgtgtaaaag gtggctttcg gcatattgtt tgagcatttg gcaggacgat gccgtctgaa
     3841 aggcttcaga cggcattgtg gcaaaattaa agattccgca gatagttcag cagcaaggga
     3901 acgggacggc cagtcgcacc tttttccgct ccggatttcc acgccgtacc cgcgatgtca
     3961 aggtgcgccc acgggtagcc ttcggtgaag taagacagga atgttgcggc ggtaatcgtg
     4021 cccgcgccgg gcgtgccgat gtttggaatg tcggcaaagt tggatttgag ttggtctttg
     4081 taggtctcaa agagcggcag ttgccatgct ttgtcgtcca cgttgtagga agcggcaagc
     4141 aggctgtcga tcaaatcctg attgttgccc atcacgccgc tgacatcgtg ccccaaggca
     4201 acaatacacg cgccggtcag ggtggcgacg tcgatgacgg ctttgggttt gaactgctcg
     4261 gcgtaagtga gcgcgtcgca caaaatcaga cggccttcgg catcggtgtt caacacttcg
     4321 atggtcagac ctttcatact tttcacgaca tcgcccggtt tgtttgccgc gccggaaggc
     4381 atattttcac aagtggcgac gacggcaatc aggttaatcg gcagttgcag tttgacggcg
     4441 gcgcagaagg tgctgatgac ggttgccgcg ccgcacatat caaacttcat ttcgtccatg
     4501 ttcaggccgg gcttgaggga gatgccgccg gtgtcgaagg taatgccttt gccgaccaat
     4561 accacaggcg cggcttcttt gtcggctgca ccgaaatagc tcagttcgac caaatagggg
     4621 gcttccgcgc tgcctttggc gaccgaccaa aacgaaccca tgttttcttt gatgtagtct
     4681 ttttcgatga ttttggcgtg cgcgcccagt ttttcggctt cggctttggc ggtgcgcgct
     4741 aaaaattcgg gcgtgcattc gttgggcgcg gcgttgccca agtcgcggca gaggctttgt
     4801 ccgtaaactt gcgcttcggc gacgcgcaag gcttctttaa cgacggcttc gtgtgcgctg
     4861 tggaacacgg cggtttcaaa tttggcgggc ttggcttctt ttttgtagcg gtcgaaacgg
     4921 taggcggcgt tgccgaacgc aatcgcaaac gcttcggcta cggcggcggc ttgcgcttca
     4981 tcgaaggcat ggatgtccac attgaccgtt tcctgatttt gcgcccattt ggcggcttcg
     5041 gcggcggcct tgttcaatgc ggcgcggccg gtgcttttca gacagcatac ggcaacagcc
     5101 tgcaaaccgt tgcctgtcgg gatttttgtg tcggcaaaat tttgaccttc ttcaagcgaa
     5161 gacaaaaggg caagggcggt cggatggttt aattgcgcct cttcggtgca gacaaataac
     5221 tgtgcgcctg cctgctgttc ctgcaagatt tcggtttttg tgctaaattc cacgtttatt
     5281 ctcctgattg agacggttgt cggtagtttt cggacggcct ttcgctcaaa agaccgtctg
     5341 aagacggctg gcacgattgt accccatttg aagcaccgtc tgaaaccttg cgcggacaat
     5401 ccgcctgcgc cgaaccgctt accgccccct gaccgcgatt ctatgattta tcaaagaaac
     5461 ctcatcaaag aactctcttt taccgccgtc ggcattttcg tcgtcctctt ggcggtattg
     5521 gtctccacgc aggcaatcaa cctgctcggc cgtgccgccg acgggcgtgt cgccatcgat
     5581 gccgtgttgg cattggtcgg cttctgggtc atcggtatga cgccgctttt gctggtgttg
     5641 accgcattta tcagtacgtt gaccgtgttg acccgctact ggcgcgacag cgaaatgtcg
     5701 gtctggctat cctgcggatt ggcattgaaa caatggatac gcccggtgat gcagtttgcc
     5761 gtgccgtttg ccgttttggt tgccgtcatg cagctttggg tgataccgtg ggcagagcta
     5821 cgcagccgcg aatacgctga aatcctgaag cagaagcagg aattgtcttt ggtggaggca
     5881 ggcgggttca acagtttggg caagcgcaac ggcagggttt attttgtcga aaccttcgat
     5941 accgaatccg gcatcatgaa aaacctgttc ctgcgcgaac aggacaaaaa cggcggcgac
     6001 aacatcatct tcgccaaaga aggtaacttc tcgctgaacg acaacaaacg cacgctcgaa
     6061 ttgcgccacg gctaccgtta cagcggcacg cccggacgcg ccgactacaa tcaggtttcc
     6121 ttccaaaaac tcaacctgat tatcagcacc acgccaaaac tcatcgaccc cgtttcccac
     6181 cgccgtacca ttccgaccgc ccaactgatt ggcagcagca acccgcaaca tcaggcggaa
     6241 ttgatgtggc gcatctcgct gaccgtcagc gtcctcctac tctgcctgct tgccgtgccg
     6301 ctttcctatt tcaacccgcg cagcggacat acctacaata tcttgattgc catcggtttg
     6361 tttttaattt accaaaacgg gctgaccctg ctttttgaag ccgtggaaga cggcaaaatc
     6421 catttttggc tcggactgct gcctatgcac atcatcatgt tcgtcatcgc aatcgtactt
     6481 ctgcgcgtcc gcagcatgcc cagccagccc ttctggcagg cggttggcaa aagtctgaca
     6541 ttgaaaggcg gaaaatgaac ctgatttcac gttacatcat ccgtcaaatg gcggttatgg
     6601 cggtttacgc gctccttgcc ttcctcgctt tgtacagctt ttttgaaatc ctgtacgaaa
     6661 ccggcaacct cggcaaaggc agttacggca tatgggaaat gctgggctac accgccctca
     6721 aaatgcccgc ccgcgcctac gaactgatgc ccctcgccgt ccttatcggc ggactggtct
     6781 ctctcagcca gcttgccgcc ggcagcgaac tgaccgtcat caaagccagc ggcatgagca
     6841 ccaaaaagct gctgttgatt ctgtcgcagt tcggttttat ttttgctatt gccaccgtcg
     6901 cgctcggcga atgggttgcg cccacactga gccaaaaagc cgaaaacatc aaagccgccg
     6961 ccatcaacgg caaaatcagc accggcaata ccggcctttg gctgaaagaa aaaaacagca
     7021 ttatcaatgt gcgcgaaatg ttgcccgacc atacgctttt gggcatcaaa atttgggcgc
     7081 gcaacgataa aaacgaattg gcagaggcag tggaagccga ttccgccgtt ttgaacagcg
     7141 acggcagttg gcagttgaaa aacatccgcc gcagcacgct tggcgaagac aaagtcgagg
     7201 tctctattgc ggctgaagaa aactggccga tttccgtcaa acgcaacctg atggacgtat
     7261 tgctcgtcaa acccgaccaa atgtccgtcg gcgaactgac cacctacatc cgccacctcc
     7321 aaaacaacag ccaaaacacc cgaatctacg ccatcgcatg gtggcgcaaa ttggtttacc
     7381 ccgccgcagc ctgggtgatg gcgctcgtcg cctttgcctt taccccgcaa accacccgcc
     7441 acggcaatat gggcttaaaa ctcttcggcg gcatctgtct cggattgctg ttccaccttg
     7501 ccggacggct cttcgggttt accagccaac tctacggcat cccgcccttc ctcgccggcg
     7561 cactacctac catagccttc gccttgctcg ctgtttggct gatacgcaaa caggaaaaac
     7621 gttgaaccaa tgccgtctga cccccttcgg acggcattgg tttttattat catattcctg
     7681 tagacagata gccgttccct attatagtgg attaacaaaa accagtacgg cgttgcctcg
     7741 ccttgccgta ctattgtact gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc
     7801 actatacatt acctgtcata acagttccat ttttgttaaa actagtctat gatagcggta
     7861 caaatattgt ttacaatatt taacgcaaat catttgcaac ccgacaaaag aaaaacagaa
     7921 aaaggaacaa agagatgtta gaagcctatc gtaaagccgc cgccgagcgc gccgccctcg
     7981 gcattcccgc cctccctttg aacgcgcagc aaaccgccga tttggttgag ctgctgaaaa
     8041 gcccgcccgc aggcgaaggc gagttcttgg tcgaactgct tgcccaccgt gttccgcccg
     8101 gtgtggacga tgccgccaaa gtcaaagcct cattcctggc tgccgttgcc gaaggcagcg
     8161 cgtccagccc gctgatctcc cccgaatatg cgaccgaact cttaggtacg atgctcggcg
     8221 gttacaatat ccacgcctta atcgaactct tggacgacga caaactcgcg cccattgccg
     8281 ccaaaggctt gaaacatacg cttctgatgt tcgattcctt ccacgacgtt caggaaaaag
     8341 ccgaaaaagg caacaaatac gcgcaagaag ttttgcaatc ttgggcagat gccgaatggt
     8401 tcgcctcacg cgccaaagtt cccgaaaaaa tcaccgttac cgttttcaaa gttgacggcg
     8461 aaaccaatac agacgacctc tcccccgcgc ccgacgcgtg gagtcgtccc gatattccgc
     8521 tgcacgcgct ggcaatgctg aaaaacccgc gcgacggcat cacgcccgac aaaccgggcg
     8581 aagtcggtcc gattaaattg ttggaagaac tcaaagccaa aggccatccg gttgcttacg
     8641 tcggcgacgt ggtcggtact ggttcttcac gcaaatccgc gaccaactcc gtcatttggc
     8701 ataccggcga agacattccg ttcgtgccga acaaacgctt cggcggcgta tgtttgggcg
     8761 gcaaaatcgc gccgattttc ttcaataccc aagaagattc cggcgcgctg ccgattgaag
     8821 tcgatgtatc tgctctaaaa atgggcgatg tcgtcgatat cctgccttat gaaggcaaaa
     8881 tcgtgaaaaa cggcgagact gttgccgagt ttgaattgaa atcacaagta ttgctggacg
     8941 aagtgcaagc cggcggccgt atcaacctga ttatcggccg aggtctgacc gctaaagcgc
     9001 gcgaagccct gaaactgcct gcctctactg cattccgcct gccgcaagcg cctgccgaaa
     9061 gcaaagctgg tttcaccttg gcgcaaaaaa tggtcggccg cgcctgcggt cttcccgaag
     9121 gacaaggcgt gcgtccgggt acttactgcg aaccgcgtat gacgacggtc ggctcgcaag
     9181 acacgaccgg cccgatgacc cgcgacgagt tgaaagactt ggcttgtttg ggcttctccg
     9241 ccgatatggt gatgcagtct ttctgccaca ccgccgccta tccgaaacct gtcgatgtaa
     9301 aaacccataa agaactgccc gcctttattt ccacccgtgg cggcgtgtca ctgcgtccgg
     9361 gcgacggcgt catccactcg tggctcaacc gcctgctact gcccgatacc gtcggcaccg
     9421 gcggcgacag ccatacccgt ttccccatcg gtatttcctt ccccgccggc tccggcttgg
     9481 ttgcctttgc cgccgcaacg ggcgtaatgc cgctcgatat gcccgagtct gtattggtac
     9541 gcttcagcgg caagctgcaa ccgggcgtaa ccctgcgcga tttggtgaac gccatcccgc
     9601 tgtacgcaat caaacaaggt ttgctgaccg ttgccaaagc cggtaagaaa aacatcttct
     9661 ccggccgcat cctcgaaatc gaaggcctgc ctgatttgaa agtggaacaa gcctttgaat
     9721 tgaccgacgc atccgccgaa cgctccgccg ccggctgtac cgtgaagctc aacaaagagc
     9781 cgattatcga gtacatgaaa tccaacgtcg tgttgatgaa aaacatgatt gccaacggct
     9841 atcaagaccc gcgcactttg gaacgccgca tcaaagctat ggaaaaatgg ctggcaaatc
     9901 ccgagttgct cgaagcggat aaagatgccg aatacgccgc cgtgattgaa atcaacatgg
     9961 acgacatcaa agagccgatt atcgcctgcc cgaacgaccc ggacgacgtg tgcttcatgt
    10021 ccgaacgctc cggcaccaaa atcgacgaag tattcatcgg ttcgtgtatg accaacatcg
    10081 gccacttccg cgccgcctcc aaacttttgg aaggcaaggc agacaccccc gtccgcctgt
    10141 ggattgcgcc gccgaccaaa atggacgcga aacaattgtc cgacgaagga cactacggcg
    10201 tactcggacg tgccggcgcg cgtatggaaa tgccgggttg ctccttatgt atgggtaatc
    10261 aggcgcaagt acgcgaaggt gcgaccgtta tgtccacctc cacccgcaac ttcccgaacc
    10321 gtttgggtaa aaacaccttt gtttacctcg gttcggcgga attggcagcg atttgctcca
    10381 aactgggtaa aatcccgacc gttgaagaat atcaagccaa tatcggcatc atcaacgaac
    10441 agggcgataa aatctaccgc tatatgaact tcaacgaaat cgacagctac aacgaagtag
    10501 ccgagaccgt gaacgtttaa tccccgtcat ccgtatgaag taagggattg accgcaatgc
    10561 cgtctgaaca accttcagac ggcattgcaa cattccgcta acccttcttt ccgcaaacgc
    10621 tgcaaatacg gcgttcacgc ccccacataa aggaaacgac agtgaacctg aaaaaccgcc
    10681 attttctgaa acttttagac ttcacgccgg aagaaatcac cgcctacctc gaccttgccg
    10741 ccgaattgaa agccgccaaa aaagcagggc gcgagattca gcggatgaaa gggaaaaaca
    10801 tcgccctgat ttttgaaaaa acctctactc ggacgcgctg cgcgtttgaa gtcgccgcgc
    10861 gcgatcaagg cgcgggagtg acttatttag agccgtccgc cagccaaatc gggcataagg
    10921 aaagcatcaa agacaccgcc cgcgtgttgg gcaggatgta cgatgccatc gaatatcgcg
    10981 gtttcggtca ggaagttgtt gaagaattgg cgaaatacgc gggcgtaccc gtgttcaacg
    11041 ggctgaccaa cgagttccat cccacacaaa tgcttgccga cgcactgact atgcgcgaac
    11101 acagcggcaa acctttgaac caaaccgcgt ttgcctacgt cggcgacgcg cgttacaaca
    11161 tgggcaattc cctgctgatt ttaggggcaa aattggggat ggacgtgcgt atcggcgcac
    11221 cgcaaagcct gtggccgtct gaaggcatta ttgccgccgc acacgccgcc gccaaagaaa
    11281 ccggcgcaaa aattaccctg accgaaaacg cgcatgaagc cgtgaagaat gttgatttta
    11341 ttcataccga tgtgtgggtc agcatgggcg agccgaaaga agtctggcag gaacgcatcg
    11401 atttgctgaa agattaccgc gttacgcccg aactgatggc ggcatcgggc aatccgcaag
    11461 tcaaattcat gcactgcctg cccgccttcc acaaccgcga aaccaaagtc ggcgaatgga
    11521 tttacgaaac cttcgggctg aacggtgtgg aagttacaga agaaatattc gaaagccccg
    11581 ccagcatcgt gttcgatcag gcggaaaacc gtatgcacac gattaaagcg gtaatggtcg
    11641 cggctctggg cgactgacag aactgtgcct gtttaaattc atccgcaaca cagataccgt
    11701 ctgaacacga tgttcagacg gtatccatat atagtggatt aaatttaaac cagtacggcg
    11761 ttgcctcgcc ttgccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt
    11821 tgttaatcca ctataaaaaa actgcctaca cgatgtgtag gtagtcccgt ttgaaaacaa
    11881 tcagtttttg tcttggtcaa ccaatttgtt ggcagtaatc caaggcatca tggcacgcag
    11941 ttgtgcgccg actttttcaa cttggtggtc ggcattcaga cggcggcggg cagtcataga
    12001 cgcatagttg acattaccct cttggataaa catttttgcg tattcgccgg tttgaatgcg
    12061 tttcagggca ttgcgcatgg cttctttgct ggaagcattg accacttcag ggccggtaac
    12121 gtattcgccg tactccgcat tgttggaaat ggagtagttc atattggcaa taccgccttc
    12181 gaaaatcagg tcaacaatca gtttcatttc gtgcagacat tcgaagtaag ccatttcagg
    12241 cgcgtaaccg gcttcggtca gggtttcaaa acccgccttg atcaactcga ccacgccgcc
    12301 gcacaatacg gcttgttcgc cgaacagatc ggtttcggtt tcttcgcgga aagtggtttc
    12361 aatcacaccg cctttggtgc cgccgttggc agccgcataa gacagggcga tgtctttggc
    12421 tttgccggaa ttgtcttggt aaacggcaat cagagaaggc acgccgccgc cgcgtttgta
    12481 ttcactgcgt acggtatggc ccggaccttt gggggcaacc ataatcacgt ccaagtcggc
    12541 acgcggaacg atttggttgt agtgcacgtt gaagccgtgt gcaaatgcca gcgttgcgcc
    12601 ttctttcaaa ttggctgcaa cttcggcgtg atagacggca ggcatggttt cgtcaggcag
    12661 cagcagcata acgacatcgg cttctttggt cgcttcagca acggttttga cgacatggcc
    12721 ggctgcttcg gcttttttcc aagaagaacc ttggcgcaga ccaatcacca cgtttacacc
    12781 cgaatctttc aggttggcgg catgggcatg accttgcgaa ccgtaaccga tgatggcaac
    12841 ggttttgcct ttgattaggg acagatcggc atctttatcg taatagactt gcatttgatt
    12901 tcctttaagg taaatggttg tcgaagcctt aaaatgttga gcggcttcgg acgggttaaa
    12961 cagagtgtgc cgcttaatcg gcaacttcat tcatcaatac gatttccaac gcttcggttt
    13021 tgccgtcgac ggactggacg aaggcttgga aatgcgcgct ggcgttatgt tcgtcaatag
    13081 ctgcttgaga tttccaattt tccacgaaaa caaaacggtt cggtttgccg atttcctgat
    13141 ggagatcgta gctgatgttg ccctcttctg cacggctggc tttgaccagt tctttaaact
    13201 gtgctgccag tgtttctgtg tattccggtt tgacggtaac cagtgcgaca attttaatgt
    13261 tcgacataaa tctctcctgc cgttcgtttt tcagacggca ttcaaatacc gtgccgtctg
    13321 aaaggttacg gcgttaaatt ttcaaaatac gctcaccgcg accgatgccg gccgcgcctg
    13381 tgcgtacggt ttccaaaatt tgggcgcgtc cgaccgtttc caaaaaggaa tccagcttgt
    13441 ctgtcgagcc ggtaatttca atcgtatagc tgcggtcggt tacgtcgatg atgctgcccc
    13501 ggtagatttc ggtcaagcgt aaaaattcgt cgcggtcttt gccggcggca cggactttta
    13561 ccaacatcag ttcgcgttcg acaaaacggc tttcgttcaa atcgaccact ttaatcactt
    13621 caatcaattt attgagttgc ttggtgattt gttcgatgac ctgctcgtcg ccgtgggtaa
    13681 cgatggtcat acgggacagg gttttgtctt cggtcggcgc aaccgccaaa gaatcgatat
    13741 tgtaatcgcg tgcagagaac aaaccgacca cgcggctcat cgcacctgat tcgttttcaa
    13801 tcagaacaga taagatatgt cgcatttgcc tctccttacg ccttttcgtc cgcacgcata
    13861 tgcggcggaa gtaccatttc gtccaaacct ttgccgttac cgaccatggg catcacattc
    13921 tgtttctggt cggtcaggaa gtcgataaac accagcctgt ctttttggtt caatgcttcc
    13981 aacaacgcac cttccacatc agacttcttg tccacgcgga tgccgatatg accgtatgcc
    14041 tcggcaagtt tgacgaaatc gggcaaagaa tcgaaataag tttccgactc tcggccgccg
    14101 taatatattt cctgccactg gcgtaccata ccgagataac cgttgttcag cgtaatgacg
    14161 ttaaccggaa tccgatattg gaaacaggtg gacaactctt ggatgttcat ctgaatcgag
    14221 ccgtcgccgg taatacagaa tacgtcttga tccggggcgg caagttttgc accaatcgca
    14281 taaggcagac ccacgcccat cgtacccaaa ccgccggaat tgagccattg gcgcggacgt
    14341 tcgaagggat aatattgagc cgcaaacatt tgatgctgcc ctacatccga tgtgatgatt
    14401 gccgaattgc cggtaatctc ggcaagcttc tgaatcacat attggggctt gataatttcg
    14461 ctgccgttgt caaaccacaa gcaatctcgg gaacgccatt cctctatggt tttccaccat
    14521 ttgcccaaag tatcttcaga cggcacggac tcttgttttt gccacagcgc aaccatctcg
    14581 gacaaaacgt ttttcacgtc gccgacaatc ggaatgtccg ccttcacgcg tttggcgatg
    14641 ctggaaggat cgacatcgat atggataacc ttcttcgcct tctcgaaaaa tttggacggt
    14701 acggaaacca cacggtcgtc aaaacgcgca cctacggcaa gaacgacatc cgcattctgc
    14761 atggcaaggt ttgcctcgta agtaccgtgc ataccgagca taccgaggaa ttggcggtcg
    14821 ctggaaggat aagcgcccaa gcccatcagc gtacccgtgc acggagcacc cgtcattcgg
    14881 acaaatcggg tcagctcttc agaagcatta cccaacacca cgccgccgcc aaaatagacg
    14941 actggacgtt tggcagatgc caacatctgc acggcctttt taatctgacc gatatgccct
    15001 tgaacaaccg gttgatacga acggataaaa atgtcttcct gaggatagct gaatttcgcc
    15061 atcgcctgcg taacatcttt cgggacatca accaccacag gccccggtcg gccgcttgcg
    15121 gcaatttgga acgccttttt aatggtttcc gccaactcat tgatatccgt aaccaagaaa
    15181 ttgtgtttga cgcacggacg ggtaataccc accgtatcaa cttcttggaa cgcatccgta
    15241 ccaatcaggg aattgcctac ctgcccgctg atgaccacca tcggaatcga atccgtatag
    15301 gcagtagcaa taccggtcag tgcattggta acgcccgggc cggatgtaac caatgccacg
    15361 cccaccttac cgctgacgcg cgcatacgca tctgccgcgt gtactgccgc ctgctcgtga
    15421 cgggtcagaa tgtgcttgaa tttattgagt tggaaaaggg catcgtagat ttcgataacc
    15481 gcaccgccgg gataaccgaa aacgtactcg acaccttcgg ctttgagact ctgcactatg
    15541 atttgcgcgc ctgatagctg cataacgacc tcttttatac ggtttcaaac caatagggac
    15601 aaaccgcttt gccacagcac ctgtaatgca attccaccaa gcagcgattt agggtacgcg
    15661 cattggggga acacggcaac agacggatta tccaatcaat tggaaaggaa cacagagttt
    15721 gtgaaaaaga gtggaaacga taacgcaaac cgacagttca atcaagaaaa atctttcatc
    15781 ttttaatatt ttttgaaagc agagaaatta ttgattgatt ttaaaagaat aaaatcagga
    15841 gtaccttttt tgaaagatgg aaattgttga cagtttgtgt aggaggggca gatgtgaaaa
    15901 acccttcttc gatatcaaga attgtaaaat ttacagggtt tcatcccaat aaagactcgg
    15961 gatattgatt gaacttgatt tcatttttga tatatcaaaa atattcccaa ccatacttcc
    16021 tgaaaatggc tcattgcacc ggactgtatt ggacggcatt gacagaacca agagggctaa
    16081 caacgactta atatattgat tgtatagtgg attaacaaaa atcaggacaa ggcgacgaag
    16141 ctgcagacag tacaaatagt acggcaagga gaggcaacgc cgtactggtt taaatttaat
    16201 ccactatatt tagtcttatc tatttcatta aacagcaata gacaaaaaaa taaccgctcc
    16261 aaaagcggtt gtggtgccca gggtcggact cgaaccgaca caccttgcgg cgggggattt
    16321 tgagtcccct gcgtctacca atttcgccac ctgggctggt gaagaagtcg tcattataat
    16381 ggcttttgaa attctgtaaa cctttttttg aaattatttt atctgttttt attttatttt
    16441 tgattttaaa tagaattttt attattttaa tcttactgtt ctttccgctc caaagattct
    16501 gtatgattcg gcaattcctg ccgtgcagac aacgtaaaaa aatactacat taaatctgcc
    16561 aaacgcgtta agatgaaaat attcaaattc cgtacgaatc aggttttgct atttattctt
    16621 gggagattgt catgttttcc gtaccgcgtt cctttttgcc gggcgttttc gtacttgccg
    16681 cgcttgccgc ctgcaaacct caagacaaca gtgcggcgca agccgcttct tcaagtgcat
    16741 ccgcgtcagc tgcggaaaat gcggcaaagc cgcaaacgcg cggtacggat atgcgtaagg
    16801 aagacatcgg cggcgatttc acgctgaccg acggcgaagg caagcctttc aacctgagcg
    16861 atttgaaagg caaggtcgtg attctgtctt tcggctttac gcactgtccc gatgtctgcc
    16921 cgacagagct tttgacgtac agcgacacgt tgaagcagtt gggcgggcag gctaaggacg
    16981 tgaaagtggt gttcgtcagc atcgatccgg aacgcgacac gcctgaaatc atcggcaagt
    17041 atgccaaaca gttcaatccg gactttatcg gtctgacggc aacgggcggc caaaacctgc
    17101 cggtcatcaa gcagcaatac cgcgtggttt ctgccaaagt caatcaaaaa gacgacagcg
    17161 aaaactattt ggtcgaccac tcttccggtg cgtatctcat cgacaaaaac ggtgaggttg
    17221 ccattttctc gccttacgga agcgagccgg aaacgattgc tgccgatgta aggaccctgc
    17281 tctgataaaa ccgtatgccg tctgcaccgt cggcgcctat tcagacggca ttattgtttc
    17341 aaccgacaaa ggacatccac accatgcagg ataatgcttt gaccatcgcc ttatccaagg
    17401 ggcgcatttt tgaggagacg ctgccgctgc ttgccgctgc cggcattgtt ccgactgaag
    17461 agcctgaaaa atcgcgcaag ctgattatcg ggacgaacca tgaaaacatc cgccttgtca
    17521 ttgtccgcgc aaccgatgtg ccgacttatg tccgctacgg cgcggcggac ttcggcattg
    17581 cgggcaaaga cgtgctgatc gaacacggcg gcacggggct ttaccggcct ttggatttgg
    17641 agattgccaa gtgccgcatg atggttgctg tgcgtaaagg gtttgattac gaagcagctt
    17701 cgcaacccgg atgccgtctg aagattgcca cgaagtatcc tgaaatcgcg gcatctcatt
    17761 ttgccggcaa gggtgtccat gtggacatta tcaaactgta cggctcgatg gaacttgcgc
    17821 cgctggtcgg cttgagcgat gcgattgtgg acttggtttc gacgggcaac accttgaagg
    17881 caaacggctt ggaagcagtc gaacacatcg tcgacatttc cagccgcctg gtggtcaaca
    17941 aggctgcttt gaaaacgaaa tacgcgctgc tggagccgat tattcaggcg ttcggcggcg
    18001 cagtgaaggc gaagtaagca tccatttgaa taaagatgcg ttttcagacg accctatccg
    18061 ttcccgccga caggtcgtct gaaaatatca ccggcagtaa actgtatagg agaagttaaa
    18121 atggttgcaa aaataaaaaa attctcagat tcaacccttt ccgttttgaa taacggcgag
    18181 cgtcggtttt atgtctattg tctgaccgac ctgaaaaaag acaaaatcct ctacatcggc
    18241 aaaggctgcg gtaatcgtat cttcgagcat gaatgggttg ctagtcgttc acaagaccca
    18301 gtctccggcg agattatcga tcggaaactc aaagccatct ccaaatgcaa gaaactcggt
    18361 cgctatatca tcagctatca tctgactgaa gtcgaagcac tcgccgccga atctgcctta
    18421 attcattttg ttaaatctgt cttgggtaaa aaactcaaaa ataaaattgc cgggcatggt
    18481 ccgggtggta ttagcgtaga agaactagat cgccgctttg gattctcttc tctcccactt
    18541 aacgagatta accccgacgg gctgattctc gccatcaaaa tccacaatgc tttcgattta
    18601 gatactgacg aagaattaga ctaccttttc gacaaccaag acgatgccaa cctcaaatcg
    18661 cgtacgttgg gcaactgggt tatcggtaaa gatgttgctt caaaagtgaa atacgttatc
    18721 ggcgttcaca ccggtctgca aaacgctgtt gtcagtgcat acgaagtgga cggttttgaa
    18781 acaatggttg aggaaaccaa aaacggtaga aaacaatccc gttaccgttt ccgcactacc
    18841 tctcgtagcg aagaggtatt agccaaactc ggtctgcaac aaaaatgcct gcccgaattg
    18901 aagtttggta gcgggggaga aaaagcgtat atcagaccca aaacagagac agaaactgaa
    18961 caagagaata ttcagacgac ccccaatcca aaaataaaaa aggaaaaaac caaatcatga
    19021 aaaaactcaa cacccaatcg cccgatttcc aagccggact caaagccctg ctggcttttg
    19081 aaaccgcgca aaaccccgaa accgaacgca tcgtcgccga catttgcgcc gacgtgcaaa
    19141 agcgcggcga tgcggctttg attgaataca ccaacaaatt cgatcagaca aacgctaaaa
    19201 gcatcgatga tttaatactc acgcaagccg atttgaacgc ggcgttcgag cgcattccga
    19261 acgacgttca gacggcattg cagaccgccg cccgccgtgt cgaaagctac caccaacgcc
    19321 aaaaaatgga atcgtggagc tacaccgatg aagacggcac gctgttggga caacagatta
    19381 ccccgcttga ccgcgtcggc atttacgtcc ccggcggcaa ggcggcatat ccgagttccg
    19441 tcatcatgaa cgccatgccc gcccacgtcg caggcgtgaa agaaatcatc atggtcgtgc
    19501 cgacaccgaa aggcgaacgc aacgacatcg tgcttgccgc cgcatacgtc gccggcgtaa
    19561 ccaaagtctt caccgtcggc ggcgcgcagg cggttgccgc cctcgcctac ggcacggaaa
    19621 ccatccccca agtcgataaa atcaccggtc cgggcaacgc cttcgtcgcc gccgccaaac
    19681 gccgcgtgtt cggcgtggtc ggcatcgaca tggtggcggg gccgtctgaa atcctggtca
    19741 tcgccgacgg cacgacacct gccgattggg tggcgatgga tttgttcagc caggccgaac
    19801 acgacgaaat tgcccaagcc atcttaatcg gcacgtcgca agcgtatctc gacgaagtag
    19861 aagccgctat ggaccgcctg atcgaaacta tgccgcgccg cgacatcatc gaagcctcgc
    19921 tcggcaacag gggcgcgatg atactcgcca aagacttgga cgaagcctgc gaaatcgcca
    19981 actacatttc ccccgaacac ttggaactgt cagtcgaaaa tccgcaggaa tgggcgaaaa
    20041 aaatccgcca cgccggtgcg attttcatgg gacgctacac cggcgaaagc ctcggcgact
    20101 actgcgccgg tccaaaccat gtattgccca ccagccgaac cgcccgcttt tcctcgcctt
    20161 tggggacata tgatttccaa aaacgctcca gcctgattca ggtttcggaa cagggcgcgc
    20221 aaaaattagg cgaaaccgcc agcgtgctgg cacacggcga aagcctgacc gcccacgccc
    20281 gcgcggcaga gttccgtatg aaataatgcc gaaacggcgt acaggcatat tccaaccatt
    20341 aaggaaacac gatgaaatcc gtccgctcct tcatccgcga cgacatacaa gctatgtcgg
    20401 catatcagat tgccgacgtt ccgcccggct ttgccaaact cgattcgatg gaaagtcccg
    20461 tccacccttt tgccggacat gaaacgctgt tgcaggaatg gcaggcacgg cttgccgccg
    20521 cgcccatcca tctttacccc aatccctccg gcagcggttt acaggaagca ttacgttcgg
    20581 cgttcgacat tcccgactgc gccgacatcg cgctgggcaa cggctcggac gagctgatac
    20641 agttcatcac gatgctgacc gccaaaccgg gcgcggcaat gttggcagcc gaacccagtt
    20701 tcgtcatgta ccgccacaac gccgcgctgt acggcatgga ttatgtcggc gttccactga
    20761 acggagattt caccctcaac ctgcccgccg tcctcgaagc cgtcaggaag caccgccctg
    20821 ccctgacctt tatcgcctac cccaacaacc ccaccggcgt atgtttcacg cgtgccgaaa
    20881 tcgaagccgt catcgaagct tcagacggca tcgtcgtcgt cgacgaagcc tacggcgcat
    20941 tcaacggcga cagcttcctg ccgcaggcgg gcagcattcc caacctcatc gtcatgcgta
    21001 ccgtcagcaa aatcggtttt gccggactgc gtatcggcta tgcggcaggc tgtcccgaag
    21061 tcatcggcga actgcaaaaa atcctgccgc cctacaatat gaaccaactg agcctgacca
    21121 ccgccaaact cgccctgcaa cactacggca tcatctctgc caacatcgac agcctgaaaa
    21181 acgaacgcga acggatgttc gccgaattgg gcaaaatatg ccgtctgaac acctttccaa
    21241 gtcaggcaaa cttcattacc atacgcgtac ccgatgccga tttgttgttt gacacgctca
    21301 aacaaaaccg catcttggtt aaaaaactgc atggcgcgca cccgcttttg gaacactgcc
    21361 tgcgcattac cgtaggcagc cccgcacaaa acgatgccgt tctcaacatc attcgccaac
    21421 tttactgcca accaacggat ttcctatgaa tttgactaaa acacaacgcc aactgcacaa
    21481 ctttctgacc ctcgcccaag aagcaggttc gctgtccaag ctcgccaaac tctgcggcta
    21541 ccgtaccccc gtcgcactct acaaactcaa acaacgcctt gaaaagcagg cagaagaccc
    21601 aaatgcacgc ggcatccgtc ccagcctgat ggcaaaactc gaaaaacaca ccggcaaacc
    21661 caaaggctgg ctcgacagaa aacaccgcga acgcactgtc cccgaaaccg ccgcagaaag
    21721 caccggaact gccgaaaccc aaattgccga aaccgcatct gctgccggct gccgcagcgt
    21781 taccgtcaac cgcaatacct gcgaaaccca aatcaccgtc tccatcaacc tcgacggcag
    21841 cggcaaaagc aggctggata ccggcgtacc cttcctcgaa cacatgatcg atcaaatcgc
    21901 ccgccacggc atgattgaca tcgacatcag ctgcaaaggc gacctgcaca tcgacgacca
    21961 ccacaccgcc gaagacatcg gcatcacact cggacaagca atccggcagg cactcggcga
    22021 caaaaaaggc atccgccgtt acggacattc ctacgtcccg ctcgacgaag ccctcagccg
    22081 cgtcgtcatc gacctttccg gccgccccgg actcgtgtac aacatcgaat ttacccgcgc
    22141 actaatcgga cgtttcgatg tcgatttgtt tgaagaattt ttccacggca tcgtcaacca
    22201 cagtatgatg accctgcaca tcgacaacct cagcggcaaa aacgcccacc atcaggcgga
    22261 aaccgtattc aaagccttcg ggcgcgccct gcgtatggca gtcgaacacg acccgcgcat
    22321 ggcaggacag accccctcga ccaaaggcac gctgaccgca taaaaaacca taccgtctga
    22381 aacacccgca ggcttttcag acggtatcgg aacagataag attacactac actacaaaca
    22441 gaaaaggagt aaacatcatg tccgcaaacg aatacacaca aatcggctgg ataggcttag
    22501 ggcaaatggg tctgcctatg gtaacgcggc tcttggacgg cggcatcgaa gtcggcgtat
    22561 acaaccgctc gcccgacaaa actgccccca tctccgccaa aggcgcaaaa gtttacggca
    22621 acaccgccga actcgtccgc gactatcccg tcattttcct gatggtttcc gactatgccg
    22681 ccgtgtgcga catcctgaac ggagtccgcg acggattggc cggcaaaatc atcgtcaaca
    22741 tgagcaccat ctccccgacc gaaaacctcg ccgtcaaagc acttgtcgaa gccgcaggcg
    22801 gacagtttgc cgaagcaccc gtttccggat cggtcgggcc cgccaccaac ggcacgctgc
    22861 tgattctgtt cggcggcagc gaagccgttt taaacccgct gcaaaaaata ttttccctcg
    22921 tcggcaaaaa aaccttccat ttcggcgatg tcggcaaagg ttcgggcgcg aaactcgtct
    22981 tgaactcgct cttgggcatt ttcggcgaag cgtacagcga agcgatgctg atggcgcggc
    23041 agttcggcat cgataccgac accatcgtcg aagccatcgg cggctcggca atggactcgc
    23101 ccatgttcca aaccaaaaaa tccctgtggg caaaccgcga attcccaccc gccttcgccc
    23161 tcaaacacgc ctccaaagac ctcaacctcg ccgtcaaaga gcttgaacag gtaggcaaca
    23221 ccctgcccgc cgtcgaaacc gttgctgcca gctaccgcaa agcagtcgaa gccggctacg
    23281 gcgaacagga cgtttccggc gtttacctga aattggcaga acactgattg ccttttccaa
    23341 acacaatgcc gtctgaacat atttcagacg gcatttttat caccccacgc ttaaaatcag
    23401 tcccgattat ga
//
LOCUS       DBBZYD010000021        22711 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.021, whole genome shotgun sequence.
ACCESSION   DBBZYD010000021 DBBZYD010000000
VERSION     DBBZYD010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22711
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.021"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..434)
                     /locus_tag="ACJJDL_000684"
     CDS             complement(<1..434)
                     /locus_tag="ACJJDL_000684"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573447.1"
                     /translation="MGFSPPIQAIRPKPAAPPIPRNLCPANPATLRHSRRFRHSRLFR
                     HSRESGNPAPKRGRNLSEKTETPAAVIPAQAGIQTPNAAGIYRKKPTPRHRHSRAGGN
                     PDRKRGRNLSEKTETPAAVIPAKAGIQTPNAAGIYRKKQKPPP"
     gene            411..614
                     /locus_tag="ACJJDL_000685"
                     /pseudo
     CDS             411..614
                     /locus_tag="ACJJDL_000685"
                     /inference="COORDINATES: protein motif:HMM:NF016757.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(655..2628)
                     /locus_tag="ACJJDL_000686"
     CDS             complement(655..2628)
                     /locus_tag="ACJJDL_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin knob domain-containing protein"
                     /protein_id="HGG7573448.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDDTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAGGSSNLPVENTACHIQVIAGTKHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVRNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAANGLAVGTKQEDEIKRHVHKVFSHWVNHPHAA
                     ALGYEDHNERQRSALVSTWTDENLNDNGFLTPRPDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETVNAGALDAGTLAQNLQDKADRAHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRHRDSLLEALQD"
     gene            complement(2639..3199)
                     /locus_tag="ACJJDL_000687"
     CDS             complement(2639..3199)
                     /locus_tag="ACJJDL_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HGG7573449.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            complement(3196..4250)
                     /locus_tag="ACJJDL_000688"
                     /pseudo
     CDS             complement(3196..4250)
                     /locus_tag="ACJJDL_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            complement(4264..4611)
                     /locus_tag="ACJJDL_000689"
     CDS             complement(4264..4611)
                     /locus_tag="ACJJDL_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HGG7573450.1"
                     /translation="MDKELNPDTGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            complement(4711..5379)
                     /locus_tag="ACJJDL_000690"
     CDS             complement(4711..5379)
                     /locus_tag="ACJJDL_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HGG7573451.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            complement(5376..6521)
                     /locus_tag="ACJJDL_000691"
     CDS             complement(5376..6521)
                     /locus_tag="ACJJDL_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HGG7573452.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            complement(6511..7842)
                     /locus_tag="ACJJDL_000692"
     CDS             complement(6511..7842)
                     /locus_tag="ACJJDL_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization N-terminal domain-containing
                     protein"
                     /protein_id="HGG7573453.1"
                     /translation="MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDL
                     EDMGMTGRQVQINAVFWGKGYAGRLKKLLDALEQPGGGVLVHPVWGRMHNMIAASWSY
                     RHEADYVDYAGIDITFREAAEAQEIFVFENAFLVELEALIADIDTYREAAIGFVDAVL
                     AVDAGVSALWGSALGIWSAASGTFGAVRRLFDLDKIAFPDRGGYSAAAFKNGSAKLFA
                     DISVMVDTGIRREAGLADNAMHHAGWSPRQRFDGAVAVADRAAAIPDNLLTGRFSDGL
                     QNRLNRLTAKQVQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMRRRM
                     QAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGRLNALVAAAINQKPPLI
                     VRQAPIDGTIHQIAHEFYGDMARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            complement(7842..10013)
                     /locus_tag="ACJJDL_000693"
     CDS             complement(7842..10013)
                     /locus_tag="ACJJDL_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRTRC system protein F"
                     /protein_id="HGG7573454.1"
                     /translation="MANGNMKLSLVLTARDDGARRLLADTQRQLDRTAKSRAQLERQS
                     HTYALTGIRSEKQIQREIMLTQAAFNRLARSGKASQNDLARAAVATRNRIRELNAELK
                     QGTGFADKMGKIGRFGAAAVAGGAAAYTVLKPAMDNRKQLDENINRVSRQAFIEDNSK
                     SAAWIATEGAQQIKDLALELVEKNGGTHDKALDLISGMMTTSLNFAQTKNEAQAAYAF
                     ALASEGSGEDTAKLIKTLKDGGMSGKDLQLGLEHVLQSGLDGTFEVRDMVRELPSLLP
                     AAQQAGMNGVGGLDYLLSLLQSAANKSGSPAEAATNVQNLLSKTLSPYTIGRLKKMAN
                     PNDPKKGVDWIGSVVQGKQNGENAVQVLSRLADAMLVKDKQYQDYKKRAAAGDKTAAE
                     QANMLKGALLAQLLPDLQAKQGLLAATDMTQIREYMASLAGVTLDNGKIAKNNEARML
                     SAAAQQEQQESLAMLRESLTGTLVDMETSFKKLAAEYPNATLALQALTTAATAASAAM
                     LLTAGGGKGAGFLKDVGSKALVWGKASAGGVAAGATAAGGKLLSWGKSAGSGLMNNPA
                     LVKRAGLLGMLLYSESLGDGTLPKGLRGTKTTPEMINRLKNNGIRFEPAPKREQARGG
                     VPQYLAAPSAQPTDKMLSPLFSTQTAAYQAAIQQQTAAYQAALAQDTAAVTTGLAQVQ
                     SAMASASQTINTNVSLNIDGRVIANEVSRYQVAMFGRGAGQ"
     gene            10168..10692
                     /locus_tag="ACJJDL_000694"
     CDS             10168..10692
                     /locus_tag="ACJJDL_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573455.1"
                     /translation="MNMKKLISAICVSIVLSACNQQSKTAQAEEPVQSIQAADCTAPM
                     DITVEQYLINLEQAFKTQNVSTKIHNKNIVKTDCGYDLTLVMDFGAIALKLDEQQKIR
                     AISVGYILKTDGEKGQNLVNNAINGLHSIQAVLSLTTTDKLGESEAGKQLRQRIQSDR
                     SNSAKRRSGRWYFI"
     gene            complement(10794..11063)
                     /locus_tag="ACJJDL_000695"
     CDS             complement(10794..11063)
                     /locus_tag="ACJJDL_000695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573456.1"
                     /translation="MPKTVRRYGEPRRAVGGGAVKRSYLTAHKSYRQAVILMAKAGIG
                     ADAVRDMCHAELSAWFEDILSSLGIKTPKEEGVIVSKRLRKPEGK"
     gene            complement(11003..11368)
                     /locus_tag="ACJJDL_000696"
     CDS             complement(11003..11368)
                     /locus_tag="ACJJDL_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573457.1"
                     /translation="MITVKLTHGLTYNGKVVSELRLKPLTVGGELAAFALIDDLPELP
                     ENATKAELLQRDVLETLTYWSQQIEAQGIPSDILTAQWLMENLSTEDYHTVMAAQEDL
                     CLKPSAATASPDAPSAAEQ"
     gene            complement(11372..11749)
                     /locus_tag="ACJJDL_000697"
     CDS             complement(11372..11749)
                     /locus_tag="ACJJDL_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HGG7573458.1"
                     /translation="MSDATYTGAVIMEVNGRDIEIVSIKPQTTTGRKPVKTMNRNGRV
                     NGYCDGVTEHKLSVTAAIPIDGTEIDWDNITKAKITIYPINDEGRRTSYLDCFTVDTS
                     EQYEVDNEARIDIEMIALHKIKE"
     gene            complement(11814..13223)
                     /locus_tag="ACJJDL_000698"
     CDS             complement(11814..13223)
                     /locus_tag="ACJJDL_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HGG7573459.1"
                     /translation="MPHIDFDTIPGSIRVPGQYIEFNTRNAVQGLPQNPQKVLMVAPM
                     LTAGIQPALEPVQLFSDAEAADLFGQGSLAHLMVRQAFANNPYLDLTVIGIADHSAGV
                     QATATVTLSGTATAPGVVEITIGGKQVSTAVNTGETAATVAGRLKTAITAADVTVTAS
                     GSGVAVTLTAKHKGEIGNESGLTVSTGNTGLTYQANVFTGGAKNADIATALSKVAGKH
                     YHIICSPFSDDANAKALSNHITNVFNAIEQRGCIGVLGMSAALSTATTATGKINDGRI
                     TCAWYKGAVEPNGIIAAGYAAVLAFEEDPAKPLNTLEIKGLAVTPDAQWPWFAECNNA
                     LYNGLTPLTAVNNRVQIMRAVSTYTKSANNTDDPALLDITTIRTLDYVRRSVKERIAL
                     RFPRDKLSDRLLPKVKSEILDVLIKLDQAEIIENAEANKGKLVVARAQNDPNRVNAII
                     PADVVNGLHVFAGRIDLIL"
     gene            complement(13226..13423)
                     /locus_tag="ACJJDL_000699"
     CDS             complement(13226..13423)
                     /locus_tag="ACJJDL_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HGG7573460.1"
                     /translation="MSKIKVTAADGLRVPTEHNPHEYIGQEPVEVDGNSLYYRRMIDD
                     GDLVVVEDAAPNTKTRNTKGE"
     gene            complement(13420..14070)
                     /locus_tag="ACJJDL_000700"
     CDS             complement(13420..14070)
                     /locus_tag="ACJJDL_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protein Gp37"
                     /protein_id="HGG7573461.1"
                     /translation="MITDIEQAITDRLKRGLGRMVRTVKSYNGEADDLAGQIHTLPAV
                     WVTYGGSKVEPASTGGVCGRYQDTAEFVVMVAARNLRNEQAQRQGGIDSREIGSNDLI
                     RAVRRLLDGQRLGFADSRGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLEND
                     RYPERTDNPDDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ"
     gene            complement(14060..14482)
                     /locus_tag="ACJJDL_000701"
     CDS             complement(14060..14482)
                     /locus_tag="ACJJDL_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protein Gp36 family protein"
                     /protein_id="HGG7573462.1"
                     /translation="MAYATVEDMVARFGELEVLQLTDRNNEGLIDREVAQTALVDATA
                     EIDAYLGRFRRPFEDLPPILVRLCCDIARYRLTAAQGVLITDEIRNRYKIDVLDLLRA
                     MAKGEVQLGVDDSGEEVAAGEDGIVFVNGKNKVFGRDH"
     gene            complement(14482..14880)
                     /locus_tag="ACJJDL_000702"
     CDS             complement(14482..14880)
                     /locus_tag="ACJJDL_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573463.1"
                     /translation="MAKTNNKPETAETAAPSFEDIKAELDAVQAELAAARNDVEMLTT
                     ALEKAEDDKKALSAELAELKVQHTQRAADALADSRDVMLVSTGADGKEFWRGGLLFDG
                     GWREVKRAEVGEAVWKAICAEPMLQRKAVE"
     gene            complement(14945..15853)
                     /locus_tag="ACJJDL_000703"
     CDS             complement(14945..15853)
                     /locus_tag="ACJJDL_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HGG7573464.1"
                     /translation="MDKSAILTAITAAFRKEFQTGLESVKPDYTAVAMTIPSNTATNT
                     YAWLGKFPQMREWVGSRQIEKMNKQAMSLDNKKFEATVGVARTDIEDDQVGMYRPMMA
                     AMGESAAALPDTLVWGLLKKGKTTVGYDGQYFFDTDHPVYEKSDGTGQNTPHSNLTTG
                     TDNDAPTFYVVDDTKTLKPLIFQNRTDSEFETKFDPSKSDRVFMEDEYLYGSRRRCNA
                     GFGLWQLMHMAEKTALTRENLAAIIVKMQKIKADGGYVLNVKPSLLVVPPELEDKARE
                     LLEADKINGTTNTFKGRLKLHVCVHL"
     gene            complement(15853..16914)
                     /locus_tag="ACJJDL_000704"
     CDS             complement(15853..16914)
                     /locus_tag="ACJJDL_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HGG7573465.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKSETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEK
                     DSRIAALTAQTAKPDLTKYAPISVVQELQSKVAALTAKQEADKGNELITAALTSGKLL
                     PAQKEWAEGVLKQPGGLAFLTGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            complement(17145..17561)
                     /locus_tag="ACJJDL_000705"
     CDS             complement(17145..17561)
                     /locus_tag="ACJJDL_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HGG7573466.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            complement(17689..19014)
                     /locus_tag="ACJJDL_000706"
     CDS             complement(17689..19014)
                     /locus_tag="ACJJDL_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HGG7573467.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLGNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDTYLTLAYKAPDGSLYTTDRGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQSFGTDLYAMLPDLIHEPEYIFYDKSRGKESFVLLGK
                     PLEGNEKYRLMAVLKYLPQYDSIFLDSFRRADEKEIVKSKKRYEMKKGY"
     gene            complement(19001..20569)
                     /locus_tag="ACJJDL_000707"
     CDS             complement(19001..20569)
                     /locus_tag="ACJJDL_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HGG7573468.1"
                     /translation="MAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDNGLLLRTRENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTMATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPNADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPINRTALAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            complement(20569..22191)
                     /gene="terL"
                     /locus_tag="ACJJDL_000708"
     CDS             complement(20569..22191)
                     /gene="terL"
                     /locus_tag="ACJJDL_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HGG7573469.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDALPKAIAARRAKVFD
                     PVGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIATANDVKVQVAGSGKKLRGLRHGPYRPDLTILDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWRGVKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYLANKDEMERGAQTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIIIGGYQRETG
                     KLYVVEAQIKKRLPDLIIEDVIRLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFDDEIKSKWSR"
     gene            22203..>22711
                     /locus_tag="ACJJDL_000709"
     CDS             22203..>22711
                     /locus_tag="ACJJDL_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573470.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDG"
BASE COUNT         4555 a         6403 c         6034 g         5719 t
ORIGIN      
        1 ggcgggggtt tctgtttttt ccgatagatt cctgccgcgt ttggggtctg gattcccgct
       61 ttcgcgggaa tgacggcggc gggggtttct gttttttccg ataaattcct gccgcgtttg
      121 cggtctggat tcccgcctgc gcgggaatga cggtggcggg gggtcggttt tttccgatag
      181 attcctgccg cgtttggggt ctggattccc gcctgcgcgg gaatgacggc ggcgggggtt
      241 tctgtttttt ctgatagatt cctgccgcgt ttgggggctg gattcccgct ttcgcgggaa
      301 tgacgaaaga ggcgggaatg acgaaagcgg cgggaatgac gaagagtggc aggattggcg
      361 gggcataggt ttcgggggat tggcggcgcg gccggtttcg gtcggattgc ttggatcggc
      421 gggctgaagc ccatctctac agcccatctc tacagccatc tctacagcca tctctacagc
      481 catctctaca gccatctcta cagccatctc tacagcccat ctctacagcc atctctacag
      541 ccatctctac aacccatctc tacaacccgt ctctacagcc atctctacag ccatctctac
      601 agccatctct acagccatct ctacagccat ctctacagcc atctctacag cccgctagtc
      661 ttgcagtgcc tcgagcaagc tgtctcggtg gcggcggttt cgggggccgg ttgatgttct
      721 tccactctct ctttgcggtt cttcgttggt ttcaggtatt tcggggccta tcggggagct
      781 ggcggcgttt cccgaggcgg ctttgccgat ggccatccag tcgcaactgc cttcgtacca
      841 gttggtaata atggcggcgg cgtggttttt tgcgcggata aacagccagt tgtgttgcct
      901 tcgatcgccg gtaacgcgtc ccgaatggcg ttcggatacg aagcatttga cgttgccgtc
      961 ggcaaaggcg acggggaaga cgacttcgtt ttctatgggg ccgccgcttc gtgtgaacct
     1021 gtagctgccg gtctgtatca ttgtgccgtc ggggaatctg acaatatcca cgccgccgat
     1081 ggtttggcgt gtgaattgcg cggcaacggc ggtgctgatt ttttcgtcca gcccttggat
     1141 ttgggcggcg gtgtgggtgt gggcgcggtc tgctttgtct tggaggtttt gcgccagcgt
     1201 gcccgcgtcc agcgcgccgg cgttgacggt ttcgccgtgg gactttatcc agaacacggc
     1261 ttcgcccaag gtgtcggcgg ctttgatgca cagttttaaa accagggctt tggggcggtt
     1321 ttcgtcgccg cctgtcgcca ttttgctgtc cgggcgcggg gttaaaaagc cgttgtcgtt
     1381 taaattttcg tccgtccaag tcgatacgag cgcgcttctc tgcctttcgt tgtggtcttc
     1441 gtaaccgagg gctgccgcgt gcgggtggtt tacccagtgt gaaaatactt tgtggacgtg
     1501 ccgtttgatt tcgtcttcct gcttcgttcc gactgccaag ccgttggcgg cgttgcggat
     1561 aaagcggtct tccgcctgcg ggacgttttg gatgctgccg tattttccgg tcagcagacg
     1621 gtacagctcg ggataagcgg tttcggttac gcgcgtgcgg atgtcgtcaa acgccagcca
     1681 gccggtcggg atttggtcgg acggaaacca tgcggtgatg ccgatgtcgg tacggcttaa
     1741 atcgggcagg cggttgctgt tgcccagggc gcggtagagg tcggggaagg tgttttgtgc
     1801 aaaggtcgtg ccgttggctt tgagatagcc tgcggggttt cggacggctt tgggaaagga
     1861 tacgatcgcg ccgacgggga tgccgtccga attgagtttt ttccatgcgg accagttgtc
     1921 gtttgcgctg ctcgtttggt ggcgttcgta cacgtcggac gtgtaggcgg gataacccaa
     1981 ctgcctgcac cagccgtgtt tcgtgccggc gatgacttgg atatggcagg cggtgttttc
     2041 aacgggcagg ttggagctgc cgcccgccgt cggcagggaa tagatgccgt ctgttttgag
     2101 ggtgttcaaa tcgccccgga aggtttcgac tttgaaattg ccgatgccgt atccggacag
     2161 tgtgttcggc ttaccttcga tgtcttcggc aaaacgcggt ttgttggctt tgtggaagat
     2221 gtcgtggttg ttgtaggaaa tgcggttgtt tgcgccgtgc aggcggaggg tgtcgtcgcc
     2281 gaagacgatg tgggcgttgt cggcatccgc gccgatgtag gctttgtggc cgccgttcca
     2341 gttcgtctgg ttggcggata aatggatgcc gctttggaat tgggtttggg cggtaaaggt
     2401 tttttggccg gtgatggttt ggtcgccggt ggtaactaca gccagcctat ttagtgctgc
     2461 cagtaattga ttaggctgcg acttatccgg ctggataccg gccgcagtca gcacggccag
     2521 cagctcggat tgcacttggt tgagccacca cgcgggcagg atggtgccca attcggacac
     2581 gccgtcgccg tcgtggaagg tcttgtcggg ggtttcgatg gggtgcatgg tttagtcctt
     2641 atcggtaggt aaatcggata gcggtgtggg cgggcttgag gcggttgaac aggctctcga
     2701 tcacggcatc gctgtaatcg gtcagcctgt cgcccgccgc cgagataccg gcgcggaatc
     2761 gggtaatgcg gttgttgccg ccgcgcacgt taacgtgcca cacccacatg atttcctgcg
     2821 gcgcaagacg gtcgccggcg cggtttacac cggcgcggaa cggctgcggt tcgtcgattt
     2881 ggatttgata gcccgccgcc tcggccaaac gcacaaaata aggaatactc aagccgcctg
     2941 tttcgtttag cttggccatg acggccaaca cacggcgctg gcggtttttg cccgtaccgt
     3001 ccaaacctaa tacgcgctcc caatcggcca gcatttggcc ggcgctgcgc gggtcgacgg
     3061 catcggcaac gctttgagcc gattccgcca ccgcatccag cgctgcgccg tctatttctg
     3121 cctgcgcccg cacacgcggg gcattgcggg catacgacac ggggggcaac aggccccgca
     3181 agatgtcttg atagctcatg acggcatctc cgttacatta atcgcgcccg ctttaaacca
     3241 ctcgatgcgg ttaaccgtat cggcggcacg gttggccgtc ggcgcagtca gacggcggtc
     3301 gatcacacca tccacattgc tgatagccgc ctcgatttgc gacacagtca ggccgtcgcc
     3361 ggggatcagg gtgtcgaaat attcttttag ggccgtccgt atgcggcgct tggcctcgtc
     3421 caagtcgatg ccgtcgagct tgacttgcac ggtaacaggc accgccgtta cggttggctt
     3481 gagtaccagc gcattttttg ccgttaccgg gcgcatctcg tcgatataag cctgtacgcg
     3541 gcgcacagtt tcttccgatg gcacaccgtc ggcggaggta atggcaatat ccaccgtacc
     3601 caagccgcgg cgcagcggat aaacatatgc gctggttacg ccgtcaacac tcaacgccca
     3661 gtttttatag tcgtaacggt tgccgcctgc gggcggtcgg cggatgattt ccaacagacg
     3721 cgccagcagt gaggcatcgc tttctcggtc ggtgccgcct tgtacggtaa ggcggcattc
     3781 ggtggccaca ccggcggggg cggccatcag ttgcgcctcg ccgtcgccac attggcggcc
     3841 gcgcccggct cgtcggcgat tgccggtatt tccgccgtgc cgccgctgcc gataacggcg
     3901 cgggcggtag tgcggtaaaa acgctggccg atacgcactt gcaggccgtc tgaaagcatg
     3961 gattgcgcaa taccgcttac ggtcagcgtg ccgctggccg tggtaggatt gcggcggcgc
     4021 aagccgcgca tggaggcatg ccgctccaaa tactcgcggt cggcggtatc agggaaaatc
     4081 tgccgcacaa tccagctttg atgcgcatat tgcccttcgg cgcagctggc caaacggctg
     4141 gcgtgcacat aatggtcgct gtcggggctg atatcggcat ccggccacag gcttttggta
     4201 tcgcgcagga tacgctcgcg gatttgctca aatgtcggcg tttcaaacac gtttaaaacc
     4261 tctttaaatc acgggcactt cgtggcggta atcaaacccg cccgccgccg tatccacccg
     4321 gatatgcagg atcaggcggc cgtcgtgcgg ctgctctgcg cgcacggtaa tcttgtcggc
     4381 acgcccgctc ttaacaatcg gttgcagtgc ctcatcggca tattgctcgg ccaacaggct
     4441 gacccgttgc aggtcttttt cgcgctgcaa caaatgcagc agcgagccga gcgttttatc
     4501 cgcccaccag ctgcccaacg gtgtcatcaa acggatatac acggcatttt gcagcgtatc
     4561 gacggtgcgg ccggtatagt cgccggtgtc ggggtttagc tctttgtcca tgttggcatt
     4621 ttgccgtttt cagacggcct cacggagtac acgggcttca atcccgcacg cacaaaaaag
     4681 cagcccgaag gctgccaaag gtctgcttgt ctatgccggt tccgccggta aggttttgcc
     4741 gccgatgctg tcggtatgcg ggtgctggcg caacgatata ttgccggcca ccacgtcgcc
     4801 gtcggtgtta aagctgccgc ccgtttggtt aacatcgccg ctaaaggtgg ctccgtcgcc
     4861 gccctcgacg gccatgccgc cgttgccgtt gatttggcct tgcgccgtca acactgcact
     4921 ggtctccacc aacggagcgt taaatttggc atccgtggcc gcattaacct cgtattgttt
     4981 gcagttaacc cggtacacgt cgcaatcggc ctcaatgatt ttgccttgct taatcacgat
     5041 ttttgcaccc tcatgattaa aaatcgccgt ctcgccgggc ttaaggtttt tgatgcggta
     5101 gctgccgtgc tggctgcaca caatcacacc gtgcgaagta ttgccgccca gcggtatcac
     5161 taccgcttcg ctgccgtcgg gcggatggct ggcaaagccg tattcctgca aatgttcaag
     5221 gtcttgcagg gtttcgtcgg ccaagccgct caactgcacg cgctgtatcg gctcggacga
     5281 caccaccagc gtgatttttc cccgaaaggc cgcgcgcagg gtttcgccga tatttttagc
     5341 agtttgtgcc gtttttttcg ccaatttact caaactcatt caaacaccgc cgtttctgct
     5401 tgttttttgc cgcctttttt gcccttatgg ctcacgcctt tgcgtttgcc tttgcgcttg
     5461 cgcgccgcct cggccttttt ggggtaagcg tcgggtgtcc aaataccgtc ctctttgagc
     5521 cgcagctcgg tttgcgtgcc atccatgcgg gatagcataa accgccgccc catcagaaaa
     5581 aacaccgcat cgataccgtg ctcgtcgtcg atcacatgca cacgctggcc aggttgccac
     5641 aatacgccgt cgcgggtttt atggccgccc acggttatcg tgagtgtaaa tccctccagc
     5701 cgccagtcgg ccagctgctt tttagcctgc ttttgcaatg cggccaaatt gtcggcatcg
     5761 gacaccacca ccgttttagg gcggtgcagc gtcatcgtcg ggtctttgta cacccacttt
     5821 aaatcgtgtt tggcgctgtc gccgctgcgg ccgtgcgatt gcgccaaaaa agtaacctcg
     5881 gaaaagcggt tgtcggtatc ccactcaatg tccatgcgct cgatattgca gcggctgtcg
     5941 gtgcggctcc aacacaatgt cgccaccggc gggctgctgt aatccgcacc gcccaccacc
     6001 aacgtgccgt ccggctccag ccacggatgc agcccgaccg agttggcaat atgggttaat
     6061 gcctgccata cggtttcgcc cggctcgatg tcgattttgt ccaaagcggg gttgttttcg
     6121 gccttaagca ccaccgcttt aatctgcggc cacggcgcgg ccagcttttt ggctgcatcc
     6181 aataccgtca tgccctttac attgagctgc ggcgcggagc aatccaccaa aaaaccggcc
     6241 aaatcacgcc cgctcaagct caactcgcgg ctgcccttgc ttttgccgtg gcgctggctg
     6301 ccgatgatgc ccgtcatcac gatttgcccg tctatcacta cctcgcagct ctctccgctt
     6361 aaatcgggta tggccgcctc cggccccaac ctgccgatga caaaatcgaa gctgtcggca
     6421 gggattaaaa agtcgctgtc gatgtcgtag cgctcccagt ggcggtgctc tttaccgccc
     6481 acgcgcaccg acacggcata gccgtatgaa ttattttgca tagctgttga ccaaagtgcc
     6541 gcgcttgata aacgcggggt ggtggatatg gggattgagc cgcaccagct ctgctgcgcg
     6601 ggccatatcg ccgtaaaact cgtgggcgat ttggtgtatc gtaccgtcga ttggggcttg
     6661 gcgcacaatc agcggcggct tttggttgat ggccgccgca accaacgcat tcagacggcc
     6721 tgccgccgcg cgcagggatt ctgccgtttg gtaagcctcg gtatacacgg cgttggccgt
     6781 cagcccacca gactcggcag cagccgtctg caccgcccgc aaggcggcaa tctcggcctg
     6841 catacggcgg cgcatggcgc ggttaacctc aatcaaatcg ggcgcggtca tctcttcgcc
     6901 atgcgcctcg attaatgccg ttgccaccga caacagcgat gacgtggata acaggcgcac
     6961 cgcctgcgct accggctgca cctgtttggc ggttaaccgg ttcaggcggt tttgcaggcc
     7021 gtctgaaaag cggccggtca gtaaattatc agggatagcg gcggcacggt cggcaacagc
     7081 cacagccccg tcaaaccgct gtcgcggcga ccaaccggca tggtgcatgg cattatcggc
     7141 caaacccgcc tcacggcgta tgccagtatc taccatgacc gatatatccg caaacagctt
     7201 ggccgagccg tttttaaacg ccgctgcgct gtatccgccc cgatcgggaa aggcaatttt
     7261 gtccaaatca aacaaacggc gcaccgcacc aaacgtaccc gatgccgcac tccaaatgcc
     7321 cagcgcgctg ccccataaag ccgatacgcc cgcatccacc gccaacaccg catcaacaaa
     7381 gccgatagcc gcctcgcggt aggtgtcgat atcagcaatc aacgcctcaa gctcgaccaa
     7441 aaaggcgttt tcaaaaacaa agatttcctg cgcttcggcc gcctcgcgga aagtaatatc
     7501 gatgcccgca taatccacat aatcggcctc atgtcggtaa ctccatgatg ccgcaatcat
     7561 gttgtgcatc cgcccccaaa cagggtgcac cagcacgccg ccgcccggct gctccagcgc
     7621 atccagcagc tttttcagac ggcctgcata gcccttgccc caaaacaccg cattaatctg
     7681 cacctgccgc ccggtcatgc ccatgtcttc aaggtcgata ccctgcacaa acggccgcgc
     7741 atgctcggcc aatgccttgc cgttgctctc gtccaccacc tcaatatcaa agccgacgcc
     7801 cttgtaagat gcgtcctgca ataaggtatg ccatccgctc attattgacc cgctccacgg
     7861 ccgaacatgg ccacttgata ccgcgatacc tcattcgcga taacacgtcc gtcgatattc
     7921 aggctcacat tggtattgat ggtctgactt gccgacgcca tcgcactttg cacttgtgcc
     7981 aaacctgttg taactgcagc cgtatcctgc gccaatgctg cctgatacgc cgccgtctgc
     8041 tgctgaatgg ctgcctgata cgccgccgtc tgagttgaaa acaacggaga caacatctta
     8101 tcggtaggct gcgctgacgg agcagccaaa tactgaggga caccaccccg cgcctgttcc
     8161 cgcttcggcg caggttcaaa tcggataccg ttgtttttca gacgattaat catttcagga
     8221 gttgtcttgg taccacgcaa accctttggc aatgtgccgt cacccaaaga ctcggaatac
     8281 agcaacatac ctaacaaacc cgcccgttta actaacgctg gattattcat gagcccgcta
     8341 ccggcagatt ttccccatga cagcaactta ccgcctgccg ctgtggcacc tgctgccacg
     8401 ccgcctgcgg aagccttacc ccataccaac gctttactac ctacatcttt cagaaagcct
     8461 gcacctttac cgccaccggc ggttaataac attgcggcag acgccgctgt tgccgccgtc
     8521 gtcaatgctt gcagggctag agtggcatta gggtattccg ctgccagctt tttaaacgag
     8581 gtttccatat ccaccaatgt tcccgtcaga ctttcccgca acattgccag cgattcctgt
     8641 tgctcttgtt gcgccgctgc cgacaacatt cgcgcctcgt tgttcttagc aatttttccg
     8701 ttatccaacg ttacgccagc caacgaagcc atatattcac ggatttgcgt catatccgtt
     8761 gcagccagca aaccttgttt tgcctgcaaa tcaggcagca gttgcgccaa aagcgcgccc
     8821 ttaagcatat ttgcctgctc cgccgccgtc ttatcgcctg cagccgcgcg tttcttataa
     8881 tcttggtatt gcttatcctt tactagcatg gcatcggcaa gacgggacaa cacctgcact
     8941 gcgttttcgc cgttttgctt gccttgcaca accgagccta tccaatcgac acctttcttc
     9001 gggtcatttg gatttgccat cttcttcaga cgacctatcg tgtaaggcga cagagtttta
     9061 ctcaaaagat tttgcacatt agtcgccgct tcggcaggac tgcccgattt attcgccgca
     9121 gattgtaaga gtgagagcag gtagtccaaa ccgccgacac cattcatccc tgcctgttgc
     9181 gcggcaggga gcaggctcgg cagctcccga accatatccc gcacctcgaa agtgccgtct
     9241 aaacccgatt gcaagacgtg ctcaagcccg agttgcaggt ctttaccgct catgccgcca
     9301 tctttcaggg ttttaatcag ttttgccgta tcctcgccac tgccttctga ggcaagtgca
     9361 aaagcatatg ccgcctgcgc ttcattcttg gtttgggcaa aattcagact ggtggtcatc
     9421 atgccgctga ttaaatccaa agccttatcg tgggtcccgc catttttctc gacaagttca
     9481 agtgccaaat ccttgatctg ttgcgcacct tcagttgcaa tccacgctgc cgatttactg
     9541 ttatcctcaa taaatgcctg tctggacacg cggttgatgt tctcatcaag ctgctttctg
     9601 ttgtccatag caggcttaag caccgtatac gctgccgcgc caccagccac cgcagctgca
     9661 ccgaatcttc cgatttttcc catcttgtcc gcaaatcccg tgccctgttt cagttccgcg
     9721 ttcagctcgc gaattcggtt acgcgtagcg accgccgccc gtgccaaatc attttgtgat
     9781 gccttgccgc tgcgcgccaa acggttaaac gcagcctgtg tcagcatgat ttcgcgttga
     9841 atctgttttt ctgagcggat gccggtcaac gcataagtat ggctttgccg ttcaagttgc
     9901 gcccgcgatt tcgcggtacg atctaattgt cgttgagtat cagccagtag ccgtctcgct
     9961 ccgtcatctc gggcggttaa caccaacgac agtttcatgt tcccgtttgc cataaaaagc
    10021 agcctttaaa cgtattaact caaggtcaat tatcgtttaa aggctgttta agggaggcgg
    10081 tatgggcttc aaccccgttt tcgtgcttta tttgtttgtt gcgttataat accagaatga
    10141 taaccatttt attcaaaggg atattttatg aatatgaaaa aattgatttc cgcaatttgt
    10201 gtttcaattg ttttatcagc ctgcaaccaa caatcaaaaa cggcacaagc cgaagaacct
    10261 gtccaaagta tccaggctgc tgattgtacc gccccaatgg acatcacagt tgaacaatat
    10321 ctcatcaatt tggagcaagc atttaaaact cagaacgtct caacaaaaat ccataataaa
    10381 aatattgtca agaccgattg tggttatgac cttactttgg taatggattt tggggcgatt
    10441 gcgctcaaac tggacgagca gcaaaaaatt agagctatct cagtaggcta cattttaaaa
    10501 accgacggag agaaaggaca aaatctagtc aataatgcca taaatggatt acacagtatt
    10561 caggcagttc tgtctttaac taccacagac aaattgggcg aatcggaagc aggaaaacaa
    10621 cttcgtcaaa gaatccaatc agacaggagc aacagcgcaa aaagacgttc cggcagatgg
    10681 tattttatat agcgttgttt ttgaaaaaga aacaaacacc attgcaataa tcggcagaaa
    10741 acaaccctaa ccgtcaaata aaaaaaaggt cgtctgaaac tcagacgacc tttttatttt
    10801 ccctccggct ttctcagccg tttcgacaca atcactccct cttccttcgg cgtttttatg
    10861 cccaggctcg acaggatgtc ttcaaaccat gccgacagct cggcgtggca catatcgcgc
    10921 actgcgtccg cccctatccc cgcctttgcc atcaggatga ccgcctgacg gtagcttttg
    10981 tgtgccgtca ggtagctgcg ttttactgct ccgccgccga cggcgcgtcg gggctcgccg
    11041 tagcggcgga cggttttagg cacaaatcct cctgagccgc catcacggta tggtagtctt
    11101 cggtagagag gttttccatc agccactgcg ccgtcaggat gtcggatggg ataccttggg
    11161 cttcaatctg ctgcgaccag taggtcagcg tctctaggac gtcgcgttgc agcagttcgg
    11221 cttttgtggc gttttcgggc agctcgggca agtcatcaat cagggcgaac gccgccagtt
    11281 cgccgccgac ggtcagtggc ttgaggcgta attcagatac gactttgcca ttgtaggtca
    11341 gcccgtgggt cagtttgacg gtaatcacgc attactcctt gattttgtgc aaagcaatca
    11401 tctcaatgtc gatgcgtgcc tcgttatcga cttcatattg ctcgctggta tcgacggtaa
    11461 agcagtcgag gtaggaagtg cggcgacctt cgtcgttgat ggggtaaatc gtgattttcg
    11521 ccttggtgat gttgtcccag tcgatttccg taccgtcgat cggaatggcg gcggtaacgc
    11581 ttaatttgtg ttcggttacg ccgtcacaat aaccgttgac tcggccgttg cggttcatcg
    11641 ttttgaccgg cttgcggcct gtagtggttt gcggtttgat gctcacaatc tcgatatcgc
    11701 ggccgttcac ctccataatc accgcgccgg tataggtagc gtcgctcatg ctttatcctt
    11761 ttttaaggtt tcagacggcc tttaaacctg ttttaaacgc cgtctgaaaa gggttacaaa
    11821 atcaaatcaa tgcgcccggc aaagacgtgc aggccgttga ccacatcggc ggggataatg
    11881 gcattaacac ggttggggtc gttttgcgca cgcgccacca ccagcttgcc tttgttggcc
    11941 tcggcgtttt cgatgatttc ggcttggtcg agcttaatca gcacgtccaa aatctcgctc
    12001 ttaaccttgg gcagcaggcg gtcgctcaat ttgtcgcgcg gaaaacgcag ggcaatgcgc
    12061 tctttaacgc tgcggcgcac ataatccagc gtgcgaatgg tggtaatgtc gagtagtgcc
    12121 gggtcgtcgg tgttgttggc cgacttggta taggttgata cggcacgcat aatctgcacg
    12181 cggttgttga ccgctgtgag cggggtcaag ccgttgtaca gcgcattgtt gcattctgca
    12241 aaccacggcc attgcgcatc aggtgtaacg gccagccctt tgatttccag cgtgttcagc
    12301 ggcttggcag ggtcttcttc aaaggccaac accgccgcat aacctgcggc gatgatgccg
    12361 tttggctcta ccgcaccttt gtaccaagca caggtaatgc ggccgtcgtt gattttgccg
    12421 gtagcggtgg tggccgtgct caaggccgca ctcataccca atacgccgat acagccgcgc
    12481 tgctcgatgg cgttgaatac gttggtaata tggttgctca aggctttggc gttggcgtca
    12541 tcgctaaacg ggctgcaaat aatgtgataa tgcttgcccg ccactttgga caaggccgtg
    12601 gcaatgtccg catttttggc accgccggta aagacattgg cttgataagt caggccggta
    12661 ttgccggtgc tcacggttaa gccgctctcg ttgccgatct cgcctttgtg tttggccgtc
    12721 agcgtaacgg ctacgccgct gccggatgcg gtaacggtta catcggcggc agtgatggcg
    12781 gttttcagac ggcctgccac tgtggcggcg gtctcgccgg tgttaacggc cgtgcttacc
    12841 tgcttgccgc caatcgtgat ttccaccacg cccggcgcgg tggccgtgcc ggaaagggta
    12901 acggttgcgg ttgcctgcac gcctgcgctg tggtcggcaa taccgataac ggtcaaatcc
    12961 aaataagggt tgttggcaaa tgcttggcgc accatcaaat gcgccagcga gccttgtccg
    13021 aacaaatcgg ccgcctcggc atcgctaaat agttgcaccg gctctaaggc gggctgtatg
    13081 cccgcggtca gcatgggtgc aaccatcaat accttttgcg gattttgcgg caaaccttgc
    13141 acggcattgc gggtgttaaa ttcaatatac tgcccgggca cgcggatgct gcccggaatc
    13201 gtgtcaaaat caatatgggg catcattact ctcccttagt attgcgggtt ttggtatttg
    13261 gggcggcatc ctcaaccacc accaaatcgc cgtcatcaat catgcggcgg taatacaggc
    13321 tgttgccgtc cacctccacc ggctcttggc cgatatattc gtgcgggttg tgttcggtcg
    13381 gcacacgcag gccatctgcc gccgttactt tgattttgct cattgcttat ccttaagggt
    13441 taggtttaca ggtatttcat cggcggattg cgggtcgtaa attttgccgt ccaacccctc
    13501 gaaatcaggc cacggctcgc tcaatgtacc ctgatacttg gtaaagatat ggttggggtc
    13561 gtcgggattg tcggtgcgtt cggggtagcg gtcattttcc aacccgcagg tgttaaagcg
    13621 gatggcatac tcaaccgcat atatgcttac tgcggcgttt tgcaccagca catgattggc
    13681 aatcgcgcgc accgctttgg gcaccaagcc gcggctatcg gcaaaaccga gccgctggcc
    13741 gtcaagcagg cggcgaacag cgcggattaa atcgttgctg ccgatttcgc ggctgtcgat
    13801 gccgccttgc cgctgcgcct gctcgttgcg cagattgcgg gccgccacca tcaccacaaa
    13861 ttcggcggta tcctgataac gtccgcatac gccgccggtg ctggcaggct caactttgct
    13921 gccgccatac gttacccaaa ccgcaggcag cgtatggatt tgccccgcca aatcgtcggc
    13981 ctcgccgttg tagcttttaa ccgtgcgcac catgcgaccc aagccccgtt tcagacggtc
    14041 tgttatcgct tgctcaatat cagtgatcac gcccgaacac cttattttta ccgtttacaa
    14101 acacaatacc gtcttcgccc gcggccactt cttcgccgct atcatccacg cccagctgca
    14161 cttcgccttt ggccatagca cgcagcaggt cgagcacgtc gattttgtag cggttgcgga
    14221 tttcgtcggt aatcaacacg ccctgagccg ccgtcagacg gtagcgggca atgtcgcagc
    14281 aaaggcgcac caagatgggc ggcagatcct caaaaggtcg tctgaaccgc cccagatacg
    14341 cgtcgatttc ggcagtggcg tccaccagcg cggtttgtgc gacctcgcgg tcaatcagcc
    14401 cctcgttgtt gcggtcggtg agctgcaaga cttccagctc accgaaacgc gcaaccatat
    14461 cctcaaccgt cgcgtatgcc attactcgac cgccttgcgt tgcagcatag gctcggcgca
    14521 gattgccttc cacaccgctt cgccgacttc ggcgcgcttc acttcacgcc agccgccgtc
    14581 aaacagcagg ccgccgcgcc aaaattcttt gccgtctgcg ccggtactga cgagcatcac
    14641 atcgcggctg tccgccaaag cgtcggcggc gcgttgcgta tgctgcactt tgagttcggc
    14701 aagttcggcg gacagtgcct ttttgtcgtc ttcggctttt tccaaggctg tggtcagcat
    14761 ttcgacatcg tttcgggcgg cggcaagctc tgcctgcacg gcgtccaatt cggctttgat
    14821 gtcttcaaac gacggggcgg cggtttcggc ggtttctggt ttgttgttgg tttttgccat
    14881 gatgactcct tgtttcagac ggcctttaaa taggtgttaa aggtcgtctg aaaacggttc
    14941 ggggttacag gtggacgcaa acgtgcagtt tcagacggcc tttgaaggta ttggtcgtgc
    15001 cgttgatttt gtcggcttcc aataattcac gggctttgtc ttccagctcg ggcggaacga
    15061 ccaagaggct gggcttcaca ttcaacacat agccaccgtc ggctttgatt ttctgcattt
    15121 tgacgataat ggcggcgagg ttttcgcggg tcagcgcggt tttttccgcc atgtgcatca
    15181 gttgccacaa accgaaaccg gcattgcagc ggcggcgcga tccgtacagg tattcgtctt
    15241 ccataaacac gcggtcggat ttggacgggt cgaatttggt ttcaaactcg gagtcggtgc
    15301 ggttttggaa aatcagcggc ttcagggtct tggtgtcatc gacgacgtag aaggtcggcg
    15361 cgtcgttgtc cgtaccggtc gtcagattgg agtgcggcgt attctgaccc gtgccgtccg
    15421 atttctcgta aacggggtgg tcggtatcga agaaatattg gccgtcataa ccgacagtgg
    15481 ttttaccttt tttgagcaga ccccacacca gcgtatcggg cagggcggcg gcggactcgc
    15541 ccattgccgc catcatcggg cggtacatgc cgacttggtc gtcttcgatg tccgtacgcg
    15601 ctacgccgac ggttgcttca aactttttgt tgtcgaggct catcgcctgc ttgttcattt
    15661 tttcgatttg gcgcgagccg acccattcgc gcatttgggg gaatttgccg agccacgcat
    15721 aagtattggt tgccgtattg gacggaatgg tcatcgcaac ggcggtatag tcgggcttga
    15781 cggattccaa acccgtttga aattctttgc ggaatgctgc cgtgattgcg gtcaaaatcg
    15841 ctgatttgtc cattacttac cttcgctttc tttgattttt acaaattctt cgccggacat
    15901 gcccagcatt tttgctgcgg ctgcctcttc cgcagtcagt gcggcgacgc gttcgtcggg
    15961 tgctttaccg cccgtttgcg agcctgccag tgcagcgacc ggctgggcgt tttcaataaa
    16021 gccggtcaaa aatgccaagc cgcccggctg tttcaatacg ccttctgccc actccttctg
    16081 agcaggcagc aatttgcctg aagtcagcgc ggcggtaatc aattcgttgc ctttgtctgc
    16141 ttcctgcttg gcagtcagcg cggcgacttt gctttgcagc tcttgaacca ctgagatagg
    16201 cgcgtattta gtcaaatcag gcttggcggt ttgcgccgtc aatgccgcga tgcggctgtc
    16261 tttttccgcc agctgcgcga acacgtcggc agacaatgcc acgtctttcg gcttggcttc
    16321 cacgagcgcg gacaatgccg ccttcagttc ttcttcgccc gcatcaggca gaccgaacag
    16381 ttgctgtaac aactctttca tagggttttg ctccgtttcc gattttaaaa tttgcgccga
    16441 cgctgccgcc agcacctcgt ccataccgtc caacgcgggg aaatttgtca gcgcggcgtg
    16501 aaaaattttg cttacatatc cctttgtgtc ataggaaaac acagcagaga tgtagcgata
    16561 ctcttttgcg gcaattgccg cagccgcctt gtccgtccac tccacttcgg caaacatgcc
    16621 tttaggcgtg aactccagcc aacgcatcca accggcggca ggtgcaggtt gtccgttttt
    16681 ctctttgtag agcgtctggt gttcataatc gacaaccaac tgattgcgcg agctgttggc
    16741 caacaacgcg acatcatgac cgttttcttc ggtcagatac cacgcaggga catcagtcgg
    16801 acgaccgtct actgcgcgaa attcgccata tggcagcagt tggattcgcc cgtcttttgg
    16861 ctgcacctcg aaactgcaca cggcaagtag ggttttttgt gcatttttgg acatgtgtac
    16921 ctctctcaat acggtcattt tgcctatttg aaaaaacaac aaagagtagg cgtgcttcaa
    16981 accctcccgc cattttttta aaacctgtcc gcgcgataca caattaatcg ttttcagggg
    17041 ctttttagaa gcgtctagga ttgattttta tatcttgggc aggggtttgt attacccgca
    17101 taaaaaaacg cgctaaaaag cgcgtttttg agggttttat aaattcacgg tatcagaccc
    17161 gaaaaataat cctgcacatc gtccatcaaa gcctgtttgt cgtcgtccgt cagcgtcaaa
    17221 aattcccgtt gcggaatccg aactttgcgg ttgcgccccg ccataccgcc gaagttgtgg
    17281 atggcggcat agacgatatt cgtaccgaca agggcggtat cgttgtctga cagtgtggaa
    17341 aaactgtctt tcagacgacc cgaatccgaa agcggcttgc cgtcgcggta ttttagcccc
    17401 aaccatttcg gacggcctgc gtagcggaaa ttgagcttga ccgccgtgtg catggtttcg
    17461 gacagtcggc gcatcagcag gtagcggttt tcgatcccgt tgccaagccg ctcgatttgg
    17521 tttaggacga caaagatatt gtctattttg acatcaatca tggtattatc ctgcctaggc
    17581 tactaaaaaa gcggtgaatt tgtctgccct ccgcagccct tatgcagtcc tcggactggg
    17641 attggtatcc gttacataag cgagagtgtg tcgggattgc agtccgactt agtagccttt
    17701 tttcatttca tagcgtttct tacttttcac aatttctttt tcatccgccc tgcgaaacga
    17761 atccaaaaaa atcgaatcgt actgtggcag atatttcaaa actgccatca atctgtattt
    17821 ttcgttcccc tccaacggtt ttccgagcaa aacaaaactt tcttttcctc tgcttttgtc
    17881 ataaaaaata tattcgggct catgaatcag atcggggagc atggcatata aatctgttcc
    17941 aaacgattgc ccctcccgac tgtccacctg tttgaccaat gtatcatcag acagccacac
    18001 cgtcgctcgt gtcatacctg ccaattcttg cgtttccttg ctcaatacac ccgcagcaaa
    18061 tttaagctgt cttgatagcg catttcggat tttgattttc tgctctttat cgggcttgcc
    18121 atcaatatcc aaacgttgct tgacttcata aaactctttt tcaagctgtt taaagctggt
    18181 tttaaaatcc gcaccaccca tttccgcttt ggcaaattga tgcgccaacg cacggtcgta
    18241 cttgtctaaa tcggggcggt agttcattcg tccggcgttg taatcaaatc ctcgatcggt
    18301 cgtgtacaga ctgccatccg gtgctttata ggcaagggtc agataagtat cgcctttttt
    18361 gttgtagatt ttatgggtct cgactagatt gtccgccgtg ctttgcccga caatccgccc
    18421 ctggcgttcc acatcccgct ccgacagcgc gatgaccgag caacggcagt tgtagccgtt
    18481 gggcgggtaa aacgttgccc aaaacgggtc gtcgtagcgg tacaccagcc cgtctattgc
    18541 cgaatgcgcc ggacgggtgc ggctgtcgcc taccgcgtca tacatccaat agggccgtgc
    18601 atcaatattt gccatatatc cttgatattg accggcgttg taggcagttt gcatgttggt
    18661 acggtaaatc gtctccaacc tccgcggcga accgaatacc tcgccggtgg ctgggtcgat
    18721 gatatcctta ccgttatgcc cgttcggatg cagccagccc ttgttgccga gcagattcaa
    18781 gatacctttt cgccaatcgt caaacgactg tccacttttt gccgattcaa ccatcgaagt
    18841 tttgatgtcg ttgagcatat ccaagtcggt catgcgggca atcgtataga ctttggcaat
    18901 ttcggaggct gtcagattgc ggtagctctc cgccgtaacc tttttacttt ccagccactc
    18961 gattgccttt tttggcggca gacttaaggc aaatcccaaa tcaggcgcgg gcatggtctt
    19021 gtcccaaaat atcgctgata aacaaggcct gctgcatata ggtacgcagt ttcgcgttgt
    19081 ccaaattcgg ataaagcgca ttcagtgcgg catctgcctc ctcgtagctg ttgcaagcat
    19141 taagtgcggc aaccgcctga cgcaccatcg ggttgagctg agaattgaaa tcgggctcaa
    19201 ccagcgcgtc atccaacgcg ccgtccaata tttcctgatg cctgcccgta gccttagatg
    19261 gtacggtgtg ggcggataaa gccgccaatg cagttctgtt tatcggattg tccggtacct
    19321 gccgcaccaa cacagcctca ccctcctgca catctggaat gaccagtttg tcgcgcaccc
    19381 agctttcggg gatttgtacg ccgacatcca ccagtttcgg gatagcgtcg gcaaagaccg
    19441 cgatgtcttt cggctcgcgc gtgtcaaatt caaatttcgg cacgcggttt gggtcggcat
    19501 tgggatagtt gatttgcagg aacggtccga tgatttggct tgtgatggtt tgcgccacct
    19561 gttttgcgtc cgacaccagc aaatcgcggc gtacctcgtt gtggatattg cccagcgcgt
    19621 tggtgctgga ttttccgtcc gcaccgctgg ttagcgtttg ccccaaaatc agccgcgccg
    19681 ccgatttttc gcaccagtcg gccatctgca aaaacggatt gctggttgcc atcgtaccgc
    19741 ttgcagcgtt gtgcagctcg atttccatac cttctggcat gatgcctgcc gcgttgtgac
    19801 cgatttccgc caccgctcga agcagggtgt ttttttcctc tttggttgcg cccgcgccgt
    19861 atttgccgat acggatgggc atgccgtaca gctccaaaaa ctcggcaaaa tcgtggacgg
    19921 cgtagtgttt gaacatatac agccaggaaa gcgtgcggaa aagcccgttg cgcgcctgct
    19981 ggacgctgcg cgatttttgg gtatgaacga cccagcccag cggccacaac gcttcgcctt
    20041 ccggattttc gcgggtacgc agcagcagcc cgttgtcttt gtcccatttg aaccagcttt
    20101 gcgggcggtg gataaagttt cggggtaggt aaaggccgtc tgaaaatacc cactcgacct
    20161 ccaacgcaga aaatccgtgc cctaccgcgt ccatcaaatc cataatcagg tcttcgaggg
    20221 taggcaggct gtccatcatt tcgtaggctt ggtcggacag cttttcttct tcgggcgtcg
    20281 catttcgcgg cggggcgacg cgccagttga gcgtcagcag cgcgcgtttg cgcgtcccca
    20341 tatttgccgc gatgtcgctg tcgcgctcct caatgtccgc gaaaagctcg tgttgggcgc
    20401 ggatgtcgcc gctttccgca tcctcgaaga gggcccgcat cttttgcggt gtaataaaat
    20461 tggacggatg ctcggcgata acccgaccgg tcgccgtaat ttgagccacg tccgtctgca
    20521 atgcagcttc gggcttttgg attttagttt tattgttctt ttttgccatt atcggctcca
    20581 tttacttttt atctcgtcat caaaatcgtt atcggtaggg ctttgccatt ctatcggcac
    20641 acaattggcc accgcccccg accagagcat atgcactgca tcaggaccat catcatgatc
    20701 agcctttgga aaatggcgga actgctgtat cagcgtctgt tggctctcat tcaacagaat
    20761 caaaccgttc gccatgtgag gctgtaaagt ctcaatccgc aagagcttgt ccgataccgg
    20821 cttgaccgcc cgcgccggga caggtattcc acgcgccgcg ctgcgcttga ccagctcatc
    20881 tttcaaaaat tcctgaaact gaaccgtctc aacaaaccac agtttgcaac gatattgacg
    20941 gtgcaatctg ataacgtcct caataatcaa atcagggaga cgttttttaa tctgagcttc
    21001 cacgacatac agtttgccgg tttcacgttg ataaccgcca atgataatcg ccgacgggtc
    21061 acggctcgcc cccgctttac ccagcgacgg gtcgagcgca ccgaaataca ccaaatcgga
    21121 cggcaggtcg ttccaaaact tcatcgactt ggcaaacggc gcatcttcgc cgctgaccgg
    21181 gtcgttttga tactcgctgt caaatgtcgc atgaccgtca cgggcgcgga ttttcatcag
    21241 cgcgagtacg ccgcgagccg cccagcttgt ttgcgcgccg cgctccatct cgtctttatt
    21301 ggcgagataa aacgcctcgg ccaccgtctc gccgtcgttt cggaaaagtt cctcccatct
    21361 gtcccacaag tccatgcggt cgggccagcg tttcatcgcc ttaaacttaa caccccgcca
    21421 aaacggatta ttcagggtgc ggtttagcac gctgtcgtaa tgcaaaatcg tgccgatata
    21481 aatcacatcg tatttctgac cgacaccgcc caaaggcaat acagtcttag tcagccacgc
    21541 attgagcttg tcgcgctgtt cggggttgcg gacttgctcg tcattctcaa tatcgtccaa
    21601 tatggtcagg tcaggacggt aagggccgtg acgcaaaccg cgcagctttt taccgctacc
    21661 ggccacttgg actttaacgt cattggccgt cgcaatcgta ccggcctgcc atacgcggcc
    21721 ctgcccgcat acttccggaa agtcggtttt caagcgcgga ttaaattcca attccgcctt
    21781 gatggcttcg agcatcgggt atgcctgatc tatgctgtcc atcacaataa cggcataatg
    21841 tttttggcct gtcacaatac accacagcgt aaacaactga gtaacctgcg tcgacttacc
    21901 ctcgccacgc ggcgcaccca ccgcctcatt ttcccctttg ggggagcgga taatctccgg
    21961 cagacggctg aataaaaacg catgcagttc ggatttttca ggggagcgga tataatgcgg
    22021 aaagtaggtg ttgacgaaat actcgtaacc gcctaccggg tcaaacacct tggcacggcg
    22081 tgcagcaata gccttgggca acgcatcaaa gccgtccact tccgcttcga taacttggcg
    22141 caaactggcg gccagttcgg caagggattt gaggaattct tttgttttca tgagtattta
    22201 taatgactgg attcatttct aacgcattta taggcctaaa agaagcagga tcacttttaa
    22261 aagggtttaa ccagctcaaa acagaggcag aggtagcgca aaaaaccatc gaacttaatc
    22321 aaatcattgc tggtattcaa actgatttat ttgaagccca atcttcttat acggcggcaa
    22381 ttagccgtat agatgagttg gaaaaagaac tggtggcagt aaaaaattgg tctacagaga
    22441 agcaacgcta ccaattgtat gaacttgctc ctggttcttt cgtctatcga ttgaaaacag
    22501 agatggcgaa cagcgagcca attcatgata tttgtcccca atgttacgag cagggtgtca
    22561 aatcgattct tcaattcaat gggtatgaag gtgcttttca taaatattcc tgttcccgtt
    22621 gccaaaccat aatattggga gagcgtttaa agtcagatgt tgaagtattt tcagtaggag
    22681 gatcacgtta tgggagattg atagacggct a
//
LOCUS       DBBZYD010000022        22374 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.022, whole genome shotgun sequence.
ACCESSION   DBBZYD010000022 DBBZYD010000000
VERSION     DBBZYD010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22374
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.022"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            1..100
                     /locus_tag="ACJJDL_000710"
                     /pseudo
     CDS             1..100
                     /locus_tag="ACJJDL_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(121..1035)
                     /locus_tag="ACJJDL_000711"
     CDS             complement(121..1035)
                     /locus_tag="ACJJDL_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7573471.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1291..2760
                     /locus_tag="ACJJDL_000712"
     CDS             1291..2760
                     /locus_tag="ACJJDL_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HGG7573472.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3012..3383
                     /locus_tag="ACJJDL_000713"
     CDS             3012..3383
                     /locus_tag="ACJJDL_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573473.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLDSSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3456..4865
                     /gene="thrC"
                     /locus_tag="ACJJDL_000714"
     CDS             3456..4865
                     /gene="thrC"
                     /locus_tag="ACJJDL_000714"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HGG7573474.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAVFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSEHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDVAIPRPAVLKGLETLPQRV
                     QTAPNSADAVKGIIEQTLA"
     gene            4912..5706
                     /locus_tag="ACJJDL_000715"
     CDS             4912..5706
                     /locus_tag="ACJJDL_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573475.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWVRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSVGIAVPELLAVRK
                     NALMFGNLAGIPLDAQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMWDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSEQP
                     AEIQRLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADIPP"
     gene            5894..6670
                     /locus_tag="ACJJDL_000716"
     CDS             5894..6670
                     /locus_tag="ACJJDL_000716"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HGG7573476.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            6746..6852
                     /locus_tag="ACJJDL_000717"
                     /pseudo
     CDS             6746..6852
                     /locus_tag="ACJJDL_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7441..9912)
                     /locus_tag="ACJJDL_000718"
     CDS             complement(7441..9912)
                     /locus_tag="ACJJDL_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG7573477.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9909..11087)
                     /gene="hflX"
                     /locus_tag="ACJJDL_000719"
     CDS             complement(9909..11087)
                     /gene="hflX"
                     /locus_tag="ACJJDL_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HGG7573478.1"
                     /translation="MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSAARLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLANLKKQRALRRKSRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(11092..12372)
                     /locus_tag="ACJJDL_000720"
     CDS             complement(11092..12372)
                     /locus_tag="ACJJDL_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HGG7573479.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHASYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNSRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            12374..12502
                     /locus_tag="ACJJDL_000721"
     CDS             12374..12502
                     /locus_tag="ACJJDL_000721"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573480.1"
                     /translation="MPSSRRGNGVFYQNGKLANAVSDCRLPNRQTFPRADAEPDAV"
     gene            complement(12525..13250)
                     /locus_tag="ACJJDL_000722"
     CDS             complement(12525..13250)
                     /locus_tag="ACJJDL_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HGG7573481.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13323..14000)
                     /gene="radC"
                     /locus_tag="ACJJDL_000723"
     CDS             complement(13323..14000)
                     /gene="radC"
                     /locus_tag="ACJJDL_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HGG7573482.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            14027..14149
                     /locus_tag="ACJJDL_000724"
     CDS             14027..14149
                     /locus_tag="ACJJDL_000724"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573483.1"
                     /translation="MPSETDVPTRQISEMPSEPDFRFRRHLYFKTVLRRFFQLD"
     gene            complement(14123..15472)
                     /gene="gshA"
                     /locus_tag="ACJJDL_000725"
     CDS             complement(14123..15472)
                     /gene="gshA"
                     /locus_tag="ACJJDL_000725"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HGG7573484.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWYSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15732..17141
                     /gene="leuC"
                     /locus_tag="ACJJDL_000726"
     CDS             15732..17141
                     /gene="leuC"
                     /locus_tag="ACJJDL_000726"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HGG7573485.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17238..17492
                     /locus_tag="ACJJDL_000727"
     CDS             17238..17492
                     /locus_tag="ACJJDL_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573486.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17554..18195
                     /gene="leuD"
                     /locus_tag="ACJJDL_000728"
     CDS             17554..18195
                     /gene="leuD"
                     /locus_tag="ACJJDL_000728"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HGG7573487.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFDNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAGQTLT
                     TPGGETFAFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18364..19635
                     /locus_tag="ACJJDL_000729"
     CDS             18364..19635
                     /locus_tag="ACJJDL_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7573488.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGTVTEEEKQLLNMLLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDKYDLLGNTVAVPVIKAVSERLLHTL"
     gene            19651..20382
                     /locus_tag="ACJJDL_000730"
     CDS             19651..20382
                     /locus_tag="ACJJDL_000730"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HGG7573489.1"
                     /translation="MVKLTAQQIFDKLLNEEKILSVNGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNAGPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20416..21486
                     /gene="leuB"
                     /locus_tag="ACJJDL_000731"
     CDS             20416..21486
                     /gene="leuB"
                     /locus_tag="ACJJDL_000731"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HGG7573490.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDISYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAILAAL"
     gene            21649..22212
                     /locus_tag="ACJJDL_000732"
     CDS             21649..22212
                     /locus_tag="ACJJDL_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HGG7573491.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSTTIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5406 a         5865 c         5817 g         5286 t
ORIGIN      
        1 cggcatttcc aaagggcatt ttaagccgta tttgagagaa tgcggatggc gttttcagtg
       61 ttttcagcgt gataaaattc aaatttctat tttaaaacaa tcagcaaagc aggatttatt
      121 tcagttgtcc gagacaacgg gcggctgcac cgcctgcact ccccatactt tttcaatgca
      181 ctcgagcagg agtgagacgt ggggattatc ctcgtattct tccgcataaa tgaaattgag
      241 cggcatactg tggcggcacg attcgataat agccacgccc gcgccttctt ttgccgccgc
      301 ttcggctttg tttcccggca ccattgccac acctataccg cctgcaacca aatcgataat
      361 ggtttggggg tagtcgcaca agatctgttt tttgggtgag agccggttgc tgcgccaaaa
      421 ctggtgcagg tgcttcctac ttccggacac gcccgacatt tctatccata cgcattcttg
      481 caggctctgc ggaagggagc gggtcagatg gggatattgg ctttgcgggc aaatcagcgc
      541 gtaggtcagg ttttgcagga atacgctgcg gatgccgcgt tgggcggcgt tgccgagtat
      601 aaagccgccg tgcagggttt tgtgttggat gcgcgagagg atttcgccgc tcattccgta
      661 ttggatgtgc aggcgcgttt tgggggctgt ttgaccgata ttgtccgtca gcgcgacgag
      721 ttttgccgaa tcgatggggt ggataatgcc caaactggtc tcttccgaat aatcgcctgc
      781 cagcgttttg gcaaaatgct ccagcttgtg tttgtattgc agcagggatt ccgcttcggg
      841 caacagtatt tcgcccgccc gcgtcaatac catgcctttc cccgtgcgcc tgaacagcgg
      901 cgtgccgaca tattcttcaa gggctttaat ttgggcagaa acggcaggct gggaaaggaa
      961 aagtcgtttg gcggcttggg taaggttgcc ctcgtgcgcg acggcgacaa atgattttaa
     1021 ttgtacggca tccatatatc cctccttgtg cggatgtttt ctatatttgt gcaatcgaaa
     1081 tcttttaggt ggattgttgc tgaaaattaa ctttttaatc aagtggtttg taaattgtat
     1141 cagttttccg gatgatggtt atcaaaaaaa aagattggtt ttattgcctg tttgggcttt
     1201 aaatggggtt acggcttccg aacgcagccc gtatcaaaaa gaaaagtcat gcgccccttt
     1261 tacgaggcgc gatatataag gaggaaggtt atggaaaaac ataatgggac ttatcgggat
     1321 ttgcaccgtc cggcttcgga atttgcgacg cgggacgaat atttggaaca tgaattgcag
     1381 attatgcaac caaaacgctg gcggcccaac ctgccctttc gcgattaccg cttcgagtgg
     1441 gaggatttga ttcctgcgat ggcgggaacg attggaaaag tggtgatggt gggggcggtg
     1501 gcggcggcgt ttgccgcacc tttggggctg cctgacagct ttgtactgga aaatgtgcgc
     1561 tatgagcttt taatcgccgc cgcgtttatc ttattggtat cgggcttttt tctgcccggc
     1621 gccaacctgc ccggtacgca cgggccgctg attccgatga ttcccatcgt tgtgtcggca
     1681 ggcgggcatc ctttggcgtt cggcatttcg attgcggttt taggtctgct gatggcttta
     1741 tttcgcggcg gcagtattat ggcgaagctg acaagcaacg gcgtatgcgg cggattatta
     1801 ctctatttgg gctttatcgg cacgacgggg caggtaaaaa aattgttttc gtgggcaggc
     1861 ggttttaata tgccctacat cgcttttacc gtcattattg taacgattgt gatgtacgct
     1921 ttgttggagc attggaaaaa acgctggtta gccgtgcctt tgggatgctt gattgccggt
     1981 gtggtggcat ttgcattggg tgcgccgttt gagtttcaca ccgcccccgg cctgcctcca
     2041 atgagtcctg cttattggtg gggtgaaaac agcggctggc atctggggtt gccgacggca
     2101 gaaagttttt tggttgtctt tccatttgcg gtattggctg ttgcaatgtg gtcgcccgat
     2161 tttttaggac atcaagtgtt ccaaaaaatc agctatccgg aaaaaaccga taaggtattg
     2221 atgaatatag acgacaccat gacaagttgt tctgtccgtc aagcagtggg ttctatttta
     2281 gggggtgcaa attttacctc ttcttgggga acttatatcg taccggcatc gattgccaaa
     2341 cgccccattc cgggcggtgc ggttttaacg gcggttttat gtattatcgc cgggttgtgg
     2401 ggctatccga tggacttggc gatttggcag ccggtattga gcgtagcctt ggtcgtaggc
     2461 gtatacttac cgcttttgga agcgggcatg gaaatgacgc gcaaaggcaa aaccacccaa
     2521 tccgccgcca tcgtggtgtt ctcttccgcc ttggtcaatc cggttttcgg ctgggcgttg
     2581 acgatgctgt tggataattt gggcttaatc ggctgcaaag agcgcagtgc gcaattaggt
     2641 ttcgccggac gcgtgttgat acccgcagta ggtttcttga tcttgtgtgt ggcgatgggt
     2701 gcggtcggga tgctgcccgg tatcccgccg tttttggaac acttcaaatc tttgggctag
     2761 gctgaaatcg gaaatgccgt ctgaaccgct ttcagacggc atttttgcaa acaggcaaaa
     2821 tgacggcggc gggatttttt attttcccga ttgaagtata atgttgccgg gcttcaaccg
     2881 gatattcaaa acggtttgtt ccaacactcg gaacggcgca taaaacgccg cctttcgcgt
     2941 tatcccgaac ggggcggcta atcagattct atcgccataa aaggcggggt ttcaaccgaa
     3001 aaggaattga gatgaataaa accttgtcta ttttgccggt ggcaatctta ctcggcggct
     3061 gcgccgccgg aggcggtaac acattcggca gcttagacgg tggcacaggc atgggcggca
     3121 gcatcgtcaa aatggcggtc gggagccaat gccgtgcgga attggacaaa cgcagcgaat
     3181 ggcgtttgac cgcgctggcg atgagtgctg aaaaacaggc ggaatgggaa aacaagattt
     3241 gcgcttgcgt cgcccaagaa gcacccgaaa ggatgaccgg caacgatgtg atgcagatgc
     3301 tggattcgtc cacgcgcaat caggcacttg ccgccctgac cgccaaaacg gtttccgcct
     3361 gcttcaaaca cctgtaccgc taaccttctt cagacggcat gaggcagatg ccgtctgaag
     3421 ccgttttcct gcaatttcga cagacgagaa aaatcatgaa atacatcagc acgcgcggcg
     3481 aaaccgcaca caaaccgttc agcgaagttt tattgatggg gcttgcaccc gacggcggcc
     3541 tgatgctgcc ggaacattat ccgcaaatcg ggcgcgaaac cttggacaaa tggcgcggtt
     3601 tagcttatcc cgaattggcg tttgaaatta tgcgcctgtt tgttacggat attccggagg
     3661 acgatttgcg cgacattctg aaccgtactt acacggaagc ggcgttcggt actaaggaaa
     3721 tcacccccgt ccgcacgctt tcagacggca tcaaaatcca agccttgtcc aacggcccga
     3781 cgctggcgtt caaagatatg gcaatgcagt ttttgggcaa tgcgtttgaa tatgttttaa
     3841 acaaagaagg caaaaaactc aatatcttgg gcgcaaccag cggcgatacg ggttcggctg
     3901 cggaatatgc cttgcgcggc aaaaaaggtg tgaatgtatt tatgctgtcg cccgatggca
     3961 aaatgagcgc gttccaacgc gcgcaaatgt acagcctgca agacgggaat atccacaata
     4021 tcgccgtgaa gggaatgttt gacgactgtc aggatattgt gaaggcggtg cagaacgatg
     4081 ccgtgttcaa ggaaaaatac catatcggta cggtcaactc gattaactgg ggacgcatcg
     4141 tcgcgcaagt ggtttattac tttgccggct atttcaaagc gacgcaaagc aatgacgagc
     4201 aagtcagctt ttgcgtgccg agcggcaact tcggcaacgt ttgcgcggga cacatcgcca
     4261 aacaaatggg cttgcccatc cgccgcctga ttgtcgcgac caatgaaaac gatgtgttgg
     4321 acgagttttt caaaaccggc gcataccgcc cgcgcaacag cgagcatact tatgttacct
     4381 ccagcccgtc gatggacatt tccaaagcgt ccaacttcga gcgtttcgtg ttcgacctga
     4441 tggatcgcga tcctcaggaa atcaatacgc tgtgggcgga agtggctgca ggcaaaggct
     4501 ttgacctgcg atttgccttg gacaaagtcg gtggcaaata cggctttact tccggcaagt
     4561 ccacccacgc cgaccgcctc gccaccatca aacaggttta cgagcaagac caagaactca
     4621 tcgacccgca cactgccgac ggcgtaaaag ttgcccgcga agtgcgcgaa gaaggtgaaa
     4681 cggtggtttg tttagaaact gcgttggcag cgaaattcga tgcaaccata cgcgaagccg
     4741 tcggcgatgt cgccattccg cgccccgccg tgctgaaagg tttggaaaca ttgccgcagc
     4801 gcgtgcaaac cgcgccgaat agtgcggatg cggtaaaagg catcatcgaa caaacccttg
     4861 cctgatgtcc cgtgtgggcg gcattccgtc cgaacttaag attgaaagaa aatgacctta
     4921 cctatgcagg aaacccgttt ttctatactg ctggacgaac tggcggcaaa acaggaggca
     4981 gccatcgctc cccacctgct tgccgacgga accaaggtat gggtacgcaa agcaggcagg
     5041 cacaatgcgc ggtggcgtta cgcgctgctc ggtatggttg cccgatattt gaaactgggg
     5101 gtgttgaagc cggttcccag cctcggcggc gagcctgcca ttgcaaccga atcaaaacgc
     5161 ctgtacgaat tgcgctcggt ggggatagcc gttcccgaat tgctcgccgt caggaaaaat
     5221 gcccttatgt tcggcaattt ggcaggcatc ccgctcgatg cgcaaatccg ccaagaagcc
     5281 gaagccggaa aggcggacgc ttggcttgcc ggtttggaag ccattgcacg cgtgcataaa
     5341 aaacagcagt tcctcagtca ggcgtttgca cgaaatatga tgtgggacgg aaaaaacatc
     5401 agctttctag attttgaaga cgacccttcc gaagtcctga ccatagcgca atgccaagcc
     5461 cgcgattggc tctgctacat ccattcgacc gcgctgatat tgaaaaacgg cggactgctg
     5521 gaagcggctg cggaaaaatg gggcggcgta ctgtctgagc agcctgccga aatacaaagg
     5581 ctgattgccg ccaccgtcaa accgatcctc ccgatacgca ggctggaaca cccccgctgg
     5641 ggacgggacg cgctcaggct ggcagcctcg atttccctga tttcccttgc cgatataccg
     5701 ccataagccg ccgcccgccc cgcgatgccg tctgaagccc ttcagacggc atataaccaa
     5761 cgcgcatcaa gcattgtcgc aaccatccgt ttcgtttaga attttgactt tatcccgaat
     5821 cgggcagaca ttttcactct gccgcacatc ccgaacaagc actatccatt tcttttactg
     5881 acaggaaacc caaatggcag cattcaatac ccaaaaagta ttgtccgtac accactggac
     5941 agacgcatat tttaccttta cctgcacccg cgacgaatcg ttgcgctttg aaaacggaca
     6001 gttcgttatg gtcggattga tggtggacgg caagccgctg atgcgcgcat acagcgtcgc
     6061 ctccgccaac tgggaagaac acctcgaatt tttcagcatt aaagtccaag acggtccgct
     6121 gaccagccgc ctgcaacacc tcaaagtcgg cgacgacgtg ttaatcagca aaaaaccgac
     6181 cggaaccctg gttgccggcg acctgaatcc gggcaaacac ctttacttgt tgagcaccgg
     6241 taccggcatc gctcctttct tgagcatcac caaagacccc gaaatttacg agcaatttga
     6301 aaaaatcatc ctcgtacacg gcgtgcgcta caaaaaagat ttggcgtact acgaccgctt
     6361 taccaaagaa ttgcccgaac acgaatacct cggtgacttg gttaaagaaa aactgattta
     6421 ctacccgatt gtttcgcgcg aagaattcga acaccacggt cgcctaaccg acctgatggt
     6481 gagcggcaaa ctgtttgaag acatcggcct gcccaaaatc aacccgcaag acgaccgcgc
     6541 catgctgtgc ggcagccccg cgatgctgaa agatacctgc aaagttttgg acgatttcgg
     6601 actgaccgtc tctccgaaaa caggcgtacg cggcgattac ctgattgagc gtgcgtttgt
     6661 agatcaataa gctgtttgaa aatcccgtct gaacggcacc agcaatcaaa aaccccgaat
     6721 cctgccaatc aggattcggg gtttttatag tgaattaaat ttaaatcagg acaaggcggc
     6781 gagccgcaga cagtacaaat agtacggcaa ggcgagccaa cactgtaccg gtttaaattt
     6841 aattcactat atagtgggta aaaattagaa atgcacattt ccgtcattcc aacacaggtg
     6901 ggaatccgga cttacctgtt tcattatcgt ttgaaaataa aagagaaacc aaacatatag
     6961 attcccgctt gcgcgggaat gacgacggtg ttttgccgta gccaaagcag aaaaacatcc
     7021 ctattgtcat ttcatcatga tatgacaata ggatgttaaa aattaattat cattatatga
     7081 ttgatatata agaaaaactg tcccaataag aaatgttatg cagaaaataa aatgaaaagg
     7141 atggttttca ttgaaaatgg ttgttctgcc accgtcatac acagagccag tatttggaaa
     7201 aaaatgatcc atattgacat cattattcca tttgtcgcat aaatccactt tttaattttt
     7261 tccacattaa tataatctct tatttaataa aatcaaaata aaaatcaaat gcctaacaat
     7321 tcgatctcaa attttgaacg ccaacgtgtt tgagcggtaa caatacatac tttaagtttg
     7381 caattcttca tcgtcttatt tttgttttca tcaactatac gtctaaagca acgccgtccg
     7441 tcattgttcg gacggcattt tttcagactg cattttcccc cgtttgtgaa ggcgcagggc
     7501 gttgcccaaa accgccagcg aactgaagct catacccagt gcggctatcc acggttggac
     7561 atagcccaaa acggcaagcg gtacggcaat gatattgtac gcgcccgccc atatcaggtt
     7621 ttgccggata atatggcggg tgcgccgcgc ctgatcgagc aggtgggcga cggtacgcaa
     7681 atcttcgttc aataacacaa tgtccgcgcc gtccctcgca atatccgtcc cgcccgctgc
     7741 ggcggcggat acgtctgcct gcgccaaaac gggcgcgtcg ttgatgccgt cgcctatcat
     7801 cagcactttt ttcccttctt tttgcaaggc tttgacgtat tccagtttgt cctcgggcat
     7861 ggcttgggcg cggtagtgcg cgacacccag ggcgcgtgcg gtttcggcaa cggcggtttc
     7921 gcggtcgccg ctgaggatgt gcagggtcag gtttttgcct gccaactgcc gcaccgcctc
     7981 cgccgcgctg tctttcaagg ggtcggtcag gtagaacacg gcttggaaac cgctttgact
     8041 gccgaggtaa accgcgctgc cgccgccttc tgtttgcggt tctttacctg aaatttcggc
     8101 gacataggat gccctgccca atgcccaaac ctgtgtttcg ccgttgacgg tcagttgcgc
     8161 gcccacgcct tcgccgatgc ggttgaggcg ttgtttaata gcgatgtcgg ggacgctgcc
     8221 gtctgaaatg cggcagttga ggatggcgcg ggcaagggga tgttcggact gttgttctaa
     8281 agcctgcgcc accgcgagaa caaaggcttc gtctgtgcct ctcaacaatg agatacggcg
     8341 gacggcgggt ttgccttggg tcagcgtgcc ggttttgtcg aagatgatgt cggtggtttg
     8401 ggcgagggtt tcgattgcct gctttccgcc gattaaaata ccttcgcgcg ccagcgtacc
     8461 ggtagaagct gccagcgcgg tcggcgtggc aagcgataag gcgcaggggc aggtaatgac
     8521 cagcagggcg acggtaatcc ataatgcggt gtgcgcgtcg gcgtacagcg tccagccgat
     8581 gaagacgggg acggcaagca ggagttcgcc gaatatgaaa gacgaggcgt attgttccgc
     8641 caactcggca gtgcgcggtt tttgcgctaa ggcgcggtcg agcaggcgga cgatgtgcga
     8701 cagtcgcgtg ccaccgccgg tgcggtcggt gcgtataatc agggggcttt gcgtgttgag
     8761 tgtgccggcg gttacttttt cagacggcat tttggcgacg ggcaggctct cgccggtcag
     8821 catagattcg ttgacggcac tgcttccttc cagcaccgtg ccgtcaacgg ggatggtttc
     8881 gcccggtttg accagcacga tatcgcccgc cttcaatttg acgacagctg cctcgcaggt
     8941 ttcctgcgta tcggggtaat cgggcatatg atggcaaaac gcaggaatca gcttcaccag
     9001 cctctcggcg gcatcgcctg ccttacggcg ggcaatgtgt tccataaagc gtccgcccag
     9061 caggaaaaac agcagcatcg cgatggattc gaaatacatc ccctgccccg catttgtcgc
     9121 aaggctgtaa acgccggcga taaaggtcat gatgatggcg acggtaatcg gcgtatccat
     9181 gccgacgcgg cggtttttca agtcgcgcag cgcgccttga taaaacggga cggcgcaata
     9241 gaatacgacg ggcagcacca ttaaaaagcc gccccaatgg aggatttgca ggaaatcggg
     9301 ttcgatgtcg ccgccgtaaa ggtaggtcgg cagcgcgaac atcatcgtct gcatcatccc
     9361 cagcccggca acggcgaggc ggacgatgta ttgtttgcgt tctttttggt tggcggcttc
     9421 gattttttgc gcgtcatagg gtgcggcggt gtagcctatc tgcctgattt tcaacagaat
     9481 gtcggaaagg cggattttgc cgtcgtccca gacgacgcgg cagcggtgcg tgctgtaatt
     9541 gaggtcgatg cggacgatgc cgtctgtacg caaaagctgc tgttcgatca gccagacgca
     9601 ggcggcgcag gtgatgccgc cgagcattaa aaccgcctcg cgcgtgccgc cgtgggtttc
     9661 cacaaagtcg gactggactt cgggcaggtc gtacaggcgg atttggtcga ggatttcttg
     9721 gggcggcagc tcggtttttt gcgcgtcggc ggtgcgttgt ttgtaataac tgcccaagcc
     9781 cgcgtcaata atgctttgtg cgaccgcctg acagccggcg cagcaggttt cgcggtcttc
     9841 gttttcgtaa cggacagtca ggtggaggtg ttcgggaaca tccagaccgc agtggaaaca
     9901 ggtttttttc atggcatttc ggtttcgtct gtgtttggtg cggcggcaca agactcggca
     9961 atggcttcgc gcagtgcgtc tataccggta ttttcagcaa cggaaatgcg gacggcggca
    10021 atttttcccg cagcgtcgcg ccatatgccc gtgttttgtt cttcagacgg cagcaggtcg
    10081 gttttgttgt acaccttgat gcacggaata tcgccggcat ggatttcttg cagtacgttt
    10141 tccacgtctt caatctgctg tccgctgttc ggagcggcgg catcgacgac gtgcagcagc
    10201 acatcggctt gcgcggtttc ttccagcgtg gcggaaaagg cggaaatcag tttgtgcggc
    10261 agatcgctga cgaatccgac ggtatcggtc aggataatgc tgcattcggg actgatgtac
    10321 agccgccgcg ccgtcgtgtc gagtgtggcg aaaagctggt ctttcgcata tatgcccgac
    10381 ttggtcagcc ggttgaacag gctggatttg ccgacattgg tatagccgac cagcgcaaac
    10441 gttttgattg tgcccgattc gcgggacttg cggcgcaggg cgcgctgttt tttgaggttg
    10501 gcaagctgtt ttttcaaggc attgatccga tgggcgatca atcggcggtc ggtttccagt
    10561 ttggtttcgc cggggccttt catgccgata ccgccgcgct ggctctgcag atggccgtaa
    10621 ccgcgtatca agcgtcccgc caaatggctc aattgcgcca actcgacttg cagcctgcct
    10681 tcctgcgtgc gggcgcggcg agcgaaaatc gccagaatca gccctaccct gtccaatacg
    10741 cggcatttca gttctttttc aaggttgcgt tcctgcgtgg gcgtgagttc gtggttgaat
    10801 acgaccaaat cgatgccgtc tgcggcaact gcttctgaca gctccgccgc cttgcccgtg
    10861 ccgacaaaca gcgcggtgtg cggacggtcg cgtttggcag tctccacgcg cacggaatcg
    10921 ccgcccgccg ctttgaccag ctcgacagct tccgccaatg ccgtctgaaa accgttcaga
    10981 cgggcggcac tgctgcccgt accatctttg tccaacatta cgcccaccag catgacgcgt
    11041 tcgggttgcg cttgggtact gccgttgccg cctgttctgc ctgtcatgta ttcaatcctg
    11101 taaataaagg gttacgcctc gttccgtttc tccttccggt gcaagcgtga tgcggctgcc
    11161 cgccattccg tcaacgctga agacgatgcc gcccgcctcg tgccttccta tggacaggcg
    11221 gctgccgggt cgctgccggt aggtataacg ggtacacgct tccaaacacc agcgtccgcg
    11281 ccagtggatg aaatattttt cgccttttct aaccgcaagt gtctcgccgc cgtttacctc
    11341 aaaataaggg taatcgggtt ttcgggttct aaactgccat ttcgcctgcg cgcgccgtcc
    11401 gttgcggaca tagtcgaata ccgccgtata aagcgtgccg tattccaaag gcttgagcgg
    11461 aaaaagcgcg aattggtacg cggtcagcct gccgttgggg tcgttgccgg cggttaaaac
    11521 cctgacgggg cggatttcgt ttttaccctg atacagcttg aaacttttca tcgtaatttt
    11581 gcctgccgcc tcggaaaaat caatgctggc aggattgccc gtgatttcat attccggcac
    11641 ggggtctgga cgctcgccgt ggaaataagg cagtgcgccg ctgccgacgg gataggctgt
    11701 atagagcagc tcctgtgcgg gcatggcttc gtcggtgtac acgaccgcac cgttatggca
    11761 ggcgttgcgg taatatttcc gtcctgcttc cggctgattt ctgccttggg cgcaatgccg
    11821 ctcaaacctg ctgttgccct gattgaatac gagaacggtt ttaccgtttt cgcgcacaaa
    11881 tgccgctcct gcctcatccg tatggcggtc aagtagggaa aggcggtggt agattgcgct
    11941 cattaatccg tccacttggc gttgctgcgt gcggatgtcg ctgtcggacg attcggcggc
    12001 ttcctcttcc gtgctgatgt tttcatgcac gccgttgtag agatacccgg caaggcgtgt
    12061 gcgttcggtc agcttttgtg cggtgtagtg cggattgtcg ggatggtgtt cgccgtgtcc
    12121 gtcttcggga ttgagcgtga ggtagcttgc gtgcctgcgg gcggagtttt ccaaaaccgg
    12181 cgcgtgtgcc agcttgtgca aaccgatttg ggctcggatg cggttgaggt agtgcagcgc
    12241 atcgccgccg tccctgattt gcggtgcgga cggatagaca agttcgcccg cgggcaggga
    12301 ttggttttgg gtatggtaga aaacgcctgc cgccgaaccc aacaggagca gccgaataaa
    12361 aagggatttc ataatgccgt cctcccgacg cggcaacggg gtgttttatc aaaacggcaa
    12421 acttgccaat gcggtttccg attgcagatt gccaaaccgg caaacctttc cccgtgccga
    12481 tgccgaacct gatgccgtct gaaccttcag acggcatcgg atgtttattt gtccacccgg
    12541 atgggtgcag gttcatattg tgtcgattcg tcgccgtaat acagcacgcc gagtttgatg
    12601 gggattctgc cctgcgattt gcggtgggca ttggaatcgc gcaaggaata ggcgcaaccg
    12661 caatattcct gctggtagaa gttttcacgt ttgctgattt caatcatgcg cgcgctgccg
    12721 ccgcctttgc gccagttgaa atcccaatac accacatcat cgtaaggcgc ggcggcgcgg
    12781 tgtccgcagt cgttgatttg cgccatattt ttccagcgtg aaatgcccag cgaactggta
    12841 aagacgggga acccgtgttc atgcgcgtat tgcgccgcct tttcaaaacg catatcgaaa
    12901 cacatggtgc agcggatgcc gcgttccggc tcaaactcca tgcctttggc tttggcaaac
    12961 cattctttgc ggtcgttttc gtagtcgtcg tctttatcga tgaaaggaat gccgaacttt
    13021 tccgcaaagc gcacgttttc ctcttttcgg agcatatact ctttgtgcgg atggatattg
    13081 ggattgtaaa aataaatggt gtagtcgatg ccggaggcaa gcatcgcctc catcacttcg
    13141 ccgctgcacg gggcgcagca ggaatgcagc aagacttttt tatgtccgcc gggcgggacg
    13201 agtatggggc ggtcaatgtc ggtaacggta ggtttgtttt gtgtttccat taacttaacg
    13261 atatctgtcg aatacggttg aagcggctat tttatcagag ccgccgcatg taaaacaggg
    13321 tgtcagggca tcagcccgag ctgcctgaac gaacggacgg tttgcgccgt tacgataaaa
    13381 tggtcgagca gcgacacatc gaccagcgac attgcctgtg ccagccgcct tgtgaacatg
    13441 atgtcttcct gcgaaggttc gggcgagccg cccggatggt tgtgcgcgat aatcaggctg
    13501 tcggcatatt cgtccaatgc cagtttgaca atttcacgga tgtaaatcgt gttttccgca
    13561 accgtaccgc gcgacagctc tctgaccgca atcagttggt tttggcggtt cagcagcagc
    13621 gcgacgctga cttcgacttt ttcctgcccc aaatgaaagc gtaaataatc ggccaccgta
    13681 tccggatcgg acaggacgat gctctcctgc aattcttccg ccaatatccg ccgcccgatt
    13741 tccctgacca cggcaaactg tgtgaaactt gccgtcccca tccctttgta tgccgacagt
    13801 ttgccgacct ccgcgctcat cagcctcccc aaactgccga actcctgcag caaataacgc
    13861 gccaaatcga ccgcactcat tccgcgcgtg ccgacgcgca gcaggattgc caaaagttcg
    13921 gcatcactca acgccgccgc cccgcgttcc aacagctttt ccctgggtct ttcgccttcc
    13981 ggccattgct tgatgctcat gttttccctt ttttaaatag tctgagatgc cgtctgaaac
    14041 agatgttccc acacgccaaa tatccgaaat gccgtctgaa ccggatttcc gcttcagacg
    14101 gcatctgtat ttcaaaacag tcttacgccg tttcttccaa ctcgattgaa gccgccagaa
    14161 gcgacaggcg tgccattacg ccgtaaacgt agaggcggtt gtgttcgttg tccacgtcgc
    14221 agtctttttc agagcgcggc atacccagcg agtaccattg ttcgaatacg cgcttgcagg
    14281 cttcgggcgc ttcttgggaa ttatcgccgt taccggtagg aatgctgtta gacagcggaa
    14341 caaacaccat accgccggcg ttgaggtttt cgtccgcacc gcgcccttcg tgtacgcgga
    14401 aaaagccgcc gatgacgaag cggtccatca tatacacgac gggttcgcac accgcgccgt
    14461 ttaaggtttc ataagtataa atcccttctt ggacaatcac ttcgctgact tccaagcctt
    14521 ctttgacttt cgccatttta ttgcggtttt tacggttcaa tccgcgcact tcgtcggcgg
    14581 atttgacgct catcacgccc atgccgtaag tgccggcatc ggctttgacg atgacgaaag
    14641 gtttgtcggt aatgcccgat tcgtcgtatt tggcttgaat tttcgccagc acacgttcta
    14701 ccgcttccgc caacgcgtct tcgccttcac gcccttggaa gtccaaaccg ccgatttttt
    14761 caaaataagg gttaatttgc cattcgtcga tgccgattaa cttggcaaat tcggcggtaa
    14821 cttggttgta cgcgccgaaa tgatttgttt tgcggcgcgt cgtccaaccg ccgtgcaacg
    14881 gcggcaaaac ggtttggctg atgcctttga ggatgtcggg aatgccggca gacaaatcgt
    14941 tgttcaacaa aaccacgcaa ggcgaaaagc cgtctgcaag atggacgcgg tcgcgggtac
    15001 gcaataaagg ttccaacagg attttgtcgc ccaatgcagt ttcaaattcg gtcggttcgg
    15061 ttacttccgg attcaggctg cccaagcgca cttcataccc tgccgaacgc aaaatctcgc
    15121 cgagggcgta aatgttttgc aggtaaaacg tattgcgcgt gtggttttcg ggaataatca
    15181 atacggattt cgccgtttcg caggcgcgtt gcaccgcatc ttgcgcggca accgccgcca
    15241 gcgggataaa gttgggattc agattattga agccgccggg gaacaaattc atatcgatag
    15301 acgaaatttt gtaaccggca ttgcgtatat cgaccgaacc gtaaaacggc gggcggtgta
    15361 cgctccactg cgtgcggaac cacgcctcga ttttggcgtg attggacagg atttttgcct
    15421 caaacgcctg aagttgcgcc gaatgttcgg gcgacatcac cggtaatttc atctttcgtc
    15481 tgcctctgtg tgttttttga caagatgcag atgataatgc ctttgaaaga atgacgacaa
    15541 gtattctttc gtatcgaatc atgctttaga tataactgtt tactgaaatg gacaatacgt
    15601 ctaatttttt cgttaaaatt gtttgcaaaa taacaccggc tcaaaaatta gacaaaattt
    15661 gttgcgcggt ataaagaata cgtctaaaat ccgcccaatc cgcattacca tttatccaaa
    15721 agaacaacat catgacagca caaaccctct acgacaaact ttggaacagc cacgtcgtcc
    15781 gcgaagaaga agacggcacc gtcctgctct acatcgaccg ccatttggtg cacgaagtta
    15841 ccagccctca ggcatttgaa ggcttgaaaa tggcggggcg caagctgtgg cgcatcgaca
    15901 gcgtcgtctc caccgccgac cacaacaccc cgaccggcga ttgggacaaa ggcatccaag
    15961 acccgatttc caagctgcaa gtcgatactt tggacaaaaa cattaaagag tttggcgcac
    16021 tcgcctattt tccgtttatg gacaaaggtc agggcatcgt acacgttatg ggccccgaac
    16081 aaggcgcgac cctgcccggt atgaccgtcg tctgcggcga ctcgcacact tccacccacg
    16141 gcgcattcgg cgcactggcg cacggcatcg gcacttccga agtcgagcac acgatggcga
    16201 cccagtgcat taccgcgaaa aaatccaaat ccatgctgat tgccgttgac ggcaaattaa
    16261 aagcgggcgt taccgccaaa gacgtggcac tttacatcat cgggcaaatc ggcacggcgg
    16321 gcggtacagg ctacgccgtc gagtttggcg gcgaagccat ccgcagcctt tctatggaag
    16381 gccgcatgac tttatgcaat atggcgatcg aagccggtgc gcgctcaggc atggttgccg
    16441 tcgaccaaac caccatcgac tatgtaaaag ataaaccctt cgcacccgaa ggcgaagcgt
    16501 gggacaaagc cgtcgagtac tggcgcacgc tggtgtctga cgaaggtgcg gtattcgaca
    16561 aagaataccg tttcaacgcc gaagacatcg aaccgcaagt cacttggggt acctcgcctg
    16621 aaatggtttt agacatcagc agcaaagtgc cgaatcctgc cgaagaaacc gatccggtca
    16681 aacgcagcgg tatggaacgc gcccttgaat acatgggctt ggaagccggt acgccattaa
    16741 acgaaatccc cgtcgacatc gtattcatcg gctcttgcac caacagccgc atcgaagact
    16801 tgcgcgaagc cgccgccatc gccaaagacc gcaaaaaagc cgccaacgta cagcgcgtgt
    16861 taatcgtccc cggctccggt ttggttaaag aacaagccga aaaagaaggc ttggacaaaa
    16921 ttttcattga agccggtttt gaatggcgcg aaccgggctg ttcaatgtgt ctcgccatga
    16981 acgccgaccg cctcgcaccg gggcaacgct gcgcctccac ctccaaccgc aattttgaag
    17041 gccgtcaagg caacggcgga cgtacccacc tcgtcagccc tgccatggca gccgcagccg
    17101 cagtgaccgg tcgctttacc gacatccgca tgatggcgta agtattttca ggcggtcttt
    17161 aagaatttga cgcggccgtc tgaaatatgt cccgtaaggc agaaacacct ttaatattca
    17221 aaccaaggag tttaaccatg aacaaacttt tcattaccgc cctgtccgcc ctcgccttgt
    17281 ccgcctgcgc cggcacttgg gagggcgcga aacaagacac cgcccgcaac cttgacaaaa
    17341 cacaggccgc cgccgaacgc gccgccgaac aaacaggcaa cgccgtcgaa aaaggctggg
    17401 acaaaaccaa agaagccgtc aaaaaaggcg gcaatgccgt cggacgcggc atttcccatc
    17461 tcggcggaaa aatcgaaaac gccaccgaat aaccgattcg cgatgccgtc tgaaaccgct
    17521 tcagacggca tcgtcagcac aagacgcaaa cccatgaaag cctttaccaa aattaccgcc
    17581 atcgtcgccc cgctcgaccg cagcaacgtc gataccgacg ccatcatccc caaacaattt
    17641 ttaaaatcca tcaaacgcag cggcttcggc cccaatgcct ttgacgaatg gcgttacctc
    17701 gaccacggcg aaccgggcat ggacaacagc aaacgcccgt tgaaccctga tttctcgctg
    17761 aaccagccgc gttaccaagg cgcgcaaatc ctgttgacgc gtaaaaactt cggttgcggc
    17821 tcttcacgcg aacacgcccc ttgggcattg gacgactacg gcttccgcgc cgtcatcgcc
    17881 cccagcttcg ccgacatctt ctttgacaac tgctacaaaa acggcctttt gcctatcgtg
    17941 ttgaccgaag aacaggttga ccggcttttc aaagaagttg aagccaacga aggctaccgg
    18001 ctctccatcg accttgccgg gcaaaccctg accacccccg gcggcgaaac attcgcattc
    18061 gacattaccg aacaccgcaa acactgcctc ttaaacggct tggacgaaat cggactgacc
    18121 ctgcaacacg ccgatgaaat tcacgccttt gaagaaaaac gccgccaaag ccagccttgg
    18181 ctgtttaacg gttaaaccta tgccgtctga aggccgttca gacggcattc ctgataacat
    18241 ataattgctg caactaatgt aaacagaggg gctataaatt gctttcatct ttcaagcggg
    18301 cttagcaacg ctctaaatta atgcaataca gctctatttc aaataaattt ttagattttt
    18361 aatatgcaac agattaaatt tattgactta ttttccggga tgagcggtat caggaaagga
    18421 tttgaacaag cctgtcggaa acagtcggtt gcttgcgaat gtgtttttac ctcagaaatc
    18481 aaaccggcag ctttggaagt attgaagcaa aactaccctg atgaagtgcc gtatggagat
    18541 ataacgaaaa ttgaaacggg agatattccc gattttgaca tcttgttggc aggcttccct
    18601 tgccaggctt tttctttcgc cggaaaaaga ttgggctttg aagatacgcg gggaacgctt
    18661 ttctttgatg tggcaaggat tttaaaggca aaaaaaccaa aaggttttat tttggaaaat
    18721 gtggaaggat tggtgacgca cgatagaaaa gatccgacac aaaaaatagg acgcaccctg
    18781 accgttattt tggaaacctt ggaaacattg ggctactatg tttcttggaa agttttaaat
    18841 gcaaaagatt tcggcattcc ccaaaacagg aagcgcattt atctgacagg cagtttgaaa
    18901 tccaaacccg acttgtcttt tgaaacaacc ctaagtccga aattaaaaaa tattttggaa
    18961 tcgggactgc ctaccgaaag cagtcctttc atcaaaaaat tgctaaagaa atttcccccg
    19021 tccgaactgt acggaaaatc agtaaaggac aaacggggag ggaaaaacaa tatccacagt
    19081 tgggatattg aattaaaagg cacagtaacc gaagaagaga agcaattatt aaatatgctt
    19141 ctaaaagaac ggaggaagaa aaaatgggct tcagaaatcg gcatcgattg gatggatggg
    19201 atgcctttga caaaagcgca aatttcaact ttctataaac accccaatct tcaaaatatt
    19261 ttggacagcc tgacagataa aggctatttg gttttggagc atccgaaaca aaaaattggc
    19321 gggcgaagaa tcaaagatga atccctgccc aaaggctaca atattgtttc aggaaaaaaa
    19381 tcatttgaaa tcaataaaat attagaccca aatgatgttg cgccaacctt agttgcaatg
    19441 gatatggagc accttttcgt cgttgacaac ggcggtttgc gcacacttac cggaaaagaa
    19501 ggtttacgct tattcggcta tccggacgat tattcgtttg atattcctaa aaaagacaaa
    19561 tacgatttat tgggcaatac cgttgccgtt cctgtgatta aggcggtatc tgaaaggctt
    19621 ctgcatactt tataaaccga tagggataaa atggtaaaac ttactgcaca acaaatattt
    19681 gataagttgc tgaatgagga aaaaatctta tcggtcaatg gtcaaattag atttttcttg
    19741 ggcgatgtgg atattatcgt caaacaaaaa gatgtcgtcg gcaacatcat tcaagaatgg
    19801 ctcggcggat ggttgagaaa aagggaaatt gaatttgatg tttcaaccaa tacccaaatg
    19861 ccccccgatt tctttttaaa taaaaaagac cgcagtagag aattgttgga agtaaaggcg
    19921 ttcaaccgaa atgccggccc gggttttgat attgcagatt ttaaaatgta ttctgatgaa
    19981 atcattcata aaccctatat gctggatgta gattatttaa tattcggtta cgatatggac
    20041 gacaacggca atgtaaccat caaggattta tggcttaaaa aagtatggca aattacgaga
    20101 agcatggatg ggtgggcaat taatcttcaa gtcaaaaaag gcgtggtgca taaaatccgc
    20161 ccgggtgttt ggtacagcat aaataaaaag aatatgccta tgtttgaatg cttggaagat
    20221 tttgtttccg caattgaaga aaccgtttat caaaacccgg caacacggca taacgcatcc
    20281 ttatggaaaa agaaatttga ggaagcctat aaaaaacact acaaccgatc gatttccata
    20341 cctcgttggc acgaaattgc acacaaatac aaaaagaaat aacccttcaa ccatcaaccc
    20401 ataaggaaac ttgaaatgac caaacatatc gccatcctcc gaggtgacgg catcggtccc
    20461 gaaatcgtcg ccgaaaccgt ccgcgtactc gacaaactca tcgcccaagg cttggacatc
    20521 agctacgaat acgccccatt gggtggtgaa gcctacgacg aatacggcca tccttatccc
    20581 gaatttacgc aaaacctctg ccgcaaagcc gatgccgtcc tgcttggtgc agtcggttct
    20641 cctcaatacg acaacctcga ccgtccgttg cgccctgagc gcggcctgtt ggcaatccgt
    20701 aaggatttga acctgtttgc caatttgcgt cctgctgttt tatatcccga attagccaac
    20761 gcctccacgc tgaagcctga aatcgttgcc ggtttggata ttttgattgt gcgcgaactc
    20821 accggcgaca tctatttcgg cgaaccgcgc ggcatccgcg ttctggaaaa cggcgaacgc
    20881 gaaggctaca acaccatgaa atacagcgaa agcgaaatcc gccgtattgc ccatgttgcc
    20941 ttccaatccg cccaaaaacg cagcaaaaaa gtctgttccg taggcaaagc caacgttttg
    21001 gaaaccaccg aactgtggcg cgaaatcttt gaagaaatcg gcaaacaata tcccgatgtc
    21061 gaactctccc atatgtatgt ggacaacgcc gctatgcagc tcgtgcgcgc gcccaaacaa
    21121 tttgacgtga ttgccaccgg caacatcttc ggcgatattt tatcggacga ggcctctatg
    21181 ctgaccggct ccatcggtat gctgccttct gcttctttgg acgaaaacgg caaaggcctg
    21241 tacgaaccgt ctcacggctc cgctcccgac atcgccggac aaaacaaagc caacccgctg
    21301 gccaccatcc tctcgctcgc aatgttgctg cgttacagcc tgaacgacga agcgcgcgcg
    21361 caacaagttg aaaacgccgt ccaaaaagtg ctgcaacaag gcttgcgtac cagcgacatt
    21421 tacgaagaag gcacaaaact cgtttcctgc tccgaaatgg gcgatgcgat actcgccgcc
    21481 ttgtaaaaaa acaaagcgcg gatcacaccg cgctttttca tctgcccttt tccgcccgca
    21541 ccgttcgtca accgcctgca aacccaccgt ttaccggcag gaaatgccat aaatccccgc
    21601 ctatgttagg ataaacacct ttatcggccc acacaaagga ttatcatcat gaaaaaaatc
    21661 atcttcgccg cactcgcagc ggcagccgtt ggcactgcct ccgccgccac ctacaaagtg
    21721 gacgaatatc acgccaacgc ccgtttcgcc atcgaccatt tcaacaccag caccaacgtc
    21781 ggcggttttt acggtctgac cggttccgtc gagttcgacc aagcaaaacg cgacggtaaa
    21841 atcgacatca ccatccccgt tgccaacctg caaagcggtt cgcaacactt taccgaccac
    21901 ctgaaatcag ccgacatctt cgatgccgcc caatatccgg acatccgctt tgtttccacc
    21961 aaattcaact tcaacggcaa aaaactggtt tccgttgacg gcaacctgac catgcacggc
    22021 aaaaccgccc ccgtcaaact caaagccgaa aaattcaact gctaccaaag cccgatggcg
    22081 aaaaccgaag tttgcggcgg cgacttcagc accaccatcg accgcaccaa atggggcgtg
    22141 gactacctcg ttaacgttgg tatgaccaaa agcgtccgca tcgacatcca aatcgaggca
    22201 gccaaacaat aaatcttgat gcgaatcagc acaaatgccg tcttcatcaa accgccccgc
    22261 caacggtaag ccgatatggc ggagcacaat ccgccgaaag atatttcagc ggcaggcagg
    22321 gcttgccgga aagtccggaa agtatagtgg attaacaaaa accagtacgg cgtt
//
LOCUS       DBBZYD010000023        21807 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.023, whole genome shotgun sequence.
ACCESSION   DBBZYD010000023 DBBZYD010000000
VERSION     DBBZYD010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21807
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.023"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            127..678
                     /locus_tag="ACJJDL_000733"
     CDS             127..678
                     /locus_tag="ACJJDL_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573492.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDLEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
     gene            complement(955..1646)
                     /locus_tag="ACJJDL_000734"
                     /pseudo
     CDS             complement(955..1646)
                     /locus_tag="ACJJDL_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(1952..2722)
                     /locus_tag="ACJJDL_000735"
     CDS             complement(1952..2722)
                     /locus_tag="ACJJDL_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573493.1"
                     /translation="MASIALYRLSFPVAAGGSGSRCTLCTKVHRESMLAIYSINILIY
                     NEKMFFRVTLYFVKNFVSFSKTRKSNEMMQKHKCLIDFILTVASQIAYADLPLSLEEL
                     LTDKGKFKLESSISYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQV
                     FDSQNVKAIQLSQAEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGA
                     ATAAGIGAATGVAAKQGWLLLPEADWLGIWHGDRVFMH"
     gene            complement(2753..2911)
                     /locus_tag="ACJJDL_000736"
     CDS             complement(2753..2911)
                     /locus_tag="ACJJDL_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573494.1"
                     /translation="MKTPLPICTLSALAACALSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2908..3750)
                     /locus_tag="ACJJDL_000737"
     CDS             complement(2908..3750)
                     /locus_tag="ACJJDL_000737"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7573495.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKTQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3988..4908
                     /gene="pyrB"
                     /locus_tag="ACJJDL_000738"
     CDS             3988..4908
                     /gene="pyrB"
                     /locus_tag="ACJJDL_000738"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HGG7573496.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLDASMLARAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4918..5376
                     /gene="pyrI"
                     /locus_tag="ACJJDL_000739"
     CDS             4918..5376
                     /gene="pyrI"
                     /locus_tag="ACJJDL_000739"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HGG7573497.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            5441..6106
                     /locus_tag="ACJJDL_000740"
     CDS             5441..6106
                     /locus_tag="ACJJDL_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573498.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALDLGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(6169..7386)
                     /locus_tag="ACJJDL_000741"
     CDS             complement(6169..7386)
                     /locus_tag="ACJJDL_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7573499.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFDRSE"
     gene            7570..8073
                     /gene="def"
                     /locus_tag="ACJJDL_000742"
     CDS             7570..8073
                     /gene="def"
                     /locus_tag="ACJJDL_000742"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HGG7573500.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLIADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            8160..9086
                     /gene="fmt"
                     /locus_tag="ACJJDL_000743"
     CDS             8160..9086
                     /gene="fmt"
                     /locus_tag="ACJJDL_000743"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HGG7573501.1"
                     /translation="MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGAKL"
     gene            9165..10424
                     /gene="rsmB"
                     /locus_tag="ACJJDL_000744"
     CDS             9165..10424
                     /gene="rsmB"
                     /locus_tag="ACJJDL_000744"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HGG7573502.1"
                     /translation="MSMALAQKLAADSVAAVAEGRNLQDVLAEIRAAHPQLTAQENGA
                     LQDIAYGCQRYLGSLKHMLGQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNITAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            10390..10989
                     /locus_tag="ACJJDL_000745"
     CDS             10390..10989
                     /locus_tag="ACJJDL_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HGG7573503.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10989..13106
                     /locus_tag="ACJJDL_000746"
     CDS             10989..13106
                     /locus_tag="ACJJDL_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7573504.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHY
                     AGSFTQLSLYNAASGKIEKSINPHKLDQPFPDKARWEKIQQAGSVRDLESIGGVLYAQ
                     GWLSAGTHNGRDYALFFRQPIPKDVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLL
                     IASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKL
                     FNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGRLKTFNKAAEQ
                     ILGMSLVPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVQVEYAAPDDAKILL
                     GKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAERL
                     AWKLGGKLDEQDAQILTRSIDTIIKQVAALKEMVEAFRNYARAPSLKLENQDLNALIG
                     DVLALYEAGPCRFEAELADEPLMMAADTTAMRQVLHNIFKNAAEAAEEADMPEVRVKS
                     EAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRIS
                     LSNQDAGGACVRIILPKTVETYA"
     gene            13099..14376
                     /locus_tag="ACJJDL_000747"
     CDS             13099..14376
                     /locus_tag="ACJJDL_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7573505.1"
                     /translation="MRSSDILIVDDEVGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKHGAAQIETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPTELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPAAFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAAAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            14467..15654
                     /gene="dprA"
                     /locus_tag="ACJJDL_000748"
     CDS             14467..15654
                     /gene="dprA"
                     /locus_tag="ACJJDL_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HGG7573506.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGEKGIPVVSGMASGIDT
                     AAHQGALQAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            15680..16141
                     /locus_tag="ACJJDL_000749"
     CDS             15680..16141
                     /locus_tag="ACJJDL_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HGG7573507.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            16220..18526
                     /gene="topA"
                     /locus_tag="ACJJDL_000750"
     CDS             16220..18526
                     /gene="topA"
                     /locus_tag="ACJJDL_000750"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HGG7573508.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(18599..19294)
                     /locus_tag="ACJJDL_000751"
     CDS             complement(18599..19294)
                     /locus_tag="ACJJDL_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573509.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFVPEMN
                     RILSDFKTTRGFK"
     gene            complement(19314..19865)
                     /locus_tag="ACJJDL_000752"
     CDS             complement(19314..19865)
                     /locus_tag="ACJJDL_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573510.1"
                     /translation="MEFLSLHPWWSFFIILTIILSYIGFCAHFHIQNGAVFFYSYRDV
                     TIVFLTPVILIALSYLIKNKEILSACILCITLIAFSWAWIIIYRPNTKRFFLSLLIVW
                     GKLLLSTIVWAILAISLGLAVITGNSKRKKYERRDRHAERNEKAFIGALLVGFELSRN
                     LLNLCCLHKDFSTPSKNIEVNRS"
     gene            19984..20361
                     /locus_tag="ACJJDL_000753"
     CDS             19984..20361
                     /locus_tag="ACJJDL_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiprotein-bridging factor 1 family protein"
                     /protein_id="HGG7573511.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            20450..21019
                     /gene="rsmD"
                     /locus_tag="ACJJDL_000754"
     CDS             20450..21019
                     /gene="rsmD"
                     /locus_tag="ACJJDL_000754"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HGG7573512.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVFSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PNIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            21142..21393
                     /locus_tag="ACJJDL_000755"
     CDS             21142..21393
                     /locus_tag="ACJJDL_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HGG7573513.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            21490..21573
                     /locus_tag="ACJJDL_000756"
     tRNA            21490..21573
                     /locus_tag="ACJJDL_000756"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21524..21526,aa:Tyr,seq:gta)
     gene            21604..21677
                     /locus_tag="ACJJDL_000757"
     tRNA            21604..21677
                     /locus_tag="ACJJDL_000757"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21636..21638,aa:Gly,seq:tcc)
     gene            21687..21761
                     /locus_tag="ACJJDL_000758"
     tRNA            21687..21761
                     /locus_tag="ACJJDL_000758"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21719..21721,aa:Thr,seq:ggt)
BASE COUNT         5390 a         5484 c         6016 g         4917 t
ORIGIN      
        1 gacgttttaa caacagtgag ataaaagttc ttgttccatt ttaaaacaat tagtaaaatc
       61 aagtttgtcc tagttatcta ggacagcccc ttattttttg ttcggcggct tgcgtggtcg
      121 ggtaaaatga aggttttgaa cggttggtcg gacaggaaga tgtggcgggt tttgagtgct
      181 ttgccgatag gcgtggtgtt ttttgatttg atctacggtt ttgtgttgaa tgtgttgcag
      241 ggtttggatt tgcagcgtgc cgtgccggat ttggaaggcg tgttggcggt tacgcccgat
      301 attgcattca acagtttgca gattgtcgcc aacggcggta tggcggcggt ggtctgtttc
      361 gggttggcgg ttgtgttttt gctcaaccgt tcggtgcggc ggcggcaggt gttggaaatc
      421 ggggtgttcc ggatgttggg gctggtggcg gtattggcgt tcagcgcgcc gtcggtgtgg
      481 gagtgggcga acgcgctacc gctgctgctg aagggcgcgg acgtggtcaa tacggggaat
      541 gcgcgttatg tgctgacggc tttgtgtatg ccctttccgg cggtgtcgtg cgtcatcggg
      601 ctggtggggc ggttcaggct tcagacggca tcgggcaggg cggcaaagtc agggggtgcg
      661 ggcaaggcgg acggatagga cgcatttttc agcgggtgcg tcgagaagca gccgatgtgt
      721 ttggcagccg cagcttgggg gggtgtagtg ctaatggcgg tttctttgct tttatagtgg
      781 attaacaaaa accagtacgg cgttgcctcg ccttagctca aagagaacga ttctctaagg
      841 tgctgaagca ccaagtgaat cggttccgta ctattggtac tgtctgcggc ttcgtcgcct
      901 tgtcctgatt tttgttaatc cactatataa aataaatggg caaaaatcgg tttattatcg
      961 tttttgccgc atttggattt gttctaccgt aaaacgtgtt tgacgaacgg gattcttatt
     1021 aaaaaacatc tgatttctaa caaaatcagt attttttggc acgatggcta aaatttttcc
     1081 ttccatttcg ccatcacgtg ttttccatgc gctcaagaat tgtgatttgc tcattgagac
     1141 gtgccccagc gatggatcag ccagcaaaac agtttctccg ttaataccgt tcaataccga
     1201 aaaatggttg tttttacggt attttaaata cacaattaca ggaattttta gttgtaccaa
     1261 ctgttcaaat ggcaaagcat aaccttgtgc ttcaaaaccc agttcgggca ttatgcgttg
     1321 catatcatca aaagaagcac gcatttgggt tttatccatt ttgtccaaga tttccgcttc
     1381 agaataatgt ctgccataaa aattattcag taacgtggca atcgaagccg cgccgcaaga
     1441 aaaatccaaa tcttgtttta ctatgccgga atctcgccgt gctttccaac ttcgtacatg
     1501 gatgttttgg taagaagcgg ggggtcaaca aacataggcc aagcaaaaac tatatttggg
     1561 gcgaaaccaa tcaaagccgc ataatttatc aatttataaa gattttttat cataatatgt
     1621 atacgcggaa taaacgcatg aaacataaaa aaataaaatc atatgcaatt ttattgcatg
     1681 aataaatatg aataaaatag ataatgatgg gagtaaatac gccatgtatt ttggaagttt
     1741 aaatttatta ataataaaat aatttatcgt agcgcaaata aatcccaaaa ttggaacgat
     1801 tagaaaaaaa attaatacac ccatcatcat gcaaactcta tattaataaa tagctaacta
     1861 attctattgt ggaaattagt tagctaacta aaagttatta atgattattt ccgagaattg
     1921 actgcattgt tggcagcatt ggccccaaaa cctagtgcat gaatacccgg tctccatgcc
     1981 aaattcccag ccaatccgcc tccggcagca gcagccagcc ctgttttgcc gctactcctg
     2041 ttgccgcacc gattcctgcc gcagtagccg cgccttgcgc agttcctaat ttaccatgat
     2101 tatacaaatt agcaccatga tactcccatg cacctaatgc accgccaaaa gcagcggctg
     2161 caataatggg aacaaattca ccttgtgttt ctttcatttc agcctgtgat aattgaattg
     2221 ctttcacatt ttggctgtca aaaacttggc tgtctaaatt ttgcgccatt acaggtgtaa
     2281 tcatcatagc cattacagtt gcaattttcg ttgcgctggt ttgcacataa ataggattag
     2341 caaattcgct ttgattgcgt tcagtgttga tgtagctaat actgctttct agtttgaatt
     2401 tacccttgtc agtcaataat tcttccaaac ttaaaggtaa gtcagcataa gcaatttggc
     2461 tggcaacagt caaaataaaa tctattagac atttgtgttt ttgcatcatt tcgtttgatt
     2521 ttctagtttt tgagaatgat acaaagtttt ttacaaagta aagagtcact ctgaaaaaca
     2581 ttttttcatt ataaatcaaa atattgatag aataaatagc gagcatcgat tcacggtgta
     2641 ctttagtgca aagcgtacaa cgcgagcctg aaccaccagc cgcaacagga aaagaaagcc
     2701 gatagagtgc aatgcttgcc aacgtgcaag cgagcttgca agaacgcttg gctcaacgag
     2761 agcaggcaag acagaaagca gaaagcagga taggagcggt aacgcaaagg tctcgggctt
     2821 tgatttcgcc gtaaaccctg ctgccgcctt gtccggaaag ggcgcaggcg gcgagtgccg
     2881 acagggtgca gatggggagg ggggttttca tttggggtcg caacggaagt ggtatgcgca
     2941 gatttcaaaa ccgtttttga aatacaggcg gtgcgcgtcg gcacggtcgt ggttgacgtg
     3001 gacgttgagg tggattttgg ttacccctgt ttccgcgccg attttgcgga cttcttccaa
     3061 aaggcgcgag gcgtagcctt tgcggcggct ttgcggcagg gtaacgatgt catcgatgtg
     3121 gatgtggcgg ccgctggcga gggtgcaggc ttcgcggaag ccgcagacgg cgacggcatt
     3181 gtgtttgcct tcttcaaaaa tacccagcag gcggtagcct tgggggcgtt gggttttgtt
     3241 gatctgttcg gtaaagcggt tgatgtcggt cagggcggaa cgcaaaacgc tcaaggctgc
     3301 aaaggcggtg gcggtgtcgt ccgcgccgat ttcgcgcaaa acgtaggatg cgcccgaggc
     3361 ggtctgttcc tgtgctttct cggcggcgtg tttttcttcg attgcctgtg ccagcatgac
     3421 gtgttcgtcg gcagggttgt tttgtccgcc ctgttcgcgt tcttcgagca gggctttgca
     3481 gtcgatgacg cgcaggtcgt tgtcggcggc aaagtccatc aggaagcgga acatttgggg
     3541 gttgtcggtt tccagttttt tatcgacggc gacgcagcgg atgttgtcca ccagcatggg
     3601 gcgcacccat ttcgaatagg aaagcctgtg gtctttggtg aacgaggaca gaatgccgca
     3661 caggcgttcc gcccagtcgc tgggacggaa aatcttgccg gaactcgttg tgccgtggat
     3721 gacgacttcg taggggttgc agactaacat ggcggcttcc tgaaaagaaa tgtctggcgc
     3781 gattatacct tatgcttatg cgggcgtgtt tggatatgcc gtctgaaaag tacgggattc
     3841 gtgcggtaaa actttgcggc ggcaaatgtg cgataatacg cgccgtattg ccgcttttgc
     3901 gaagctgttc cgcaaacata cgggcggcgt ggacgacgta taaccggata cccgcctgac
     3961 gcgggttttt tacggaaggg ggcaaaaatg cctaatccgc tttacagaca gcacatcatc
     4021 tcgatttcgg atttgtcgcg cgaacagttg gaatgcctgc ttcagacggc attgaagctg
     4081 aaggcgcatc cgcgcggcga tttgttggaa ggcaaactta tcggttcgtg cttctttgaa
     4141 ccgtccacgc gcacgaggct gtcgtttgaa acggcggtgc agcggctggg cggcaaggtc
     4201 atcggctttt cggacggcgc gaataccagt gccaaaaaag gcgagacgct tgccgatacc
     4261 gcccgcatca tttccggcta caccgacgca atcatccaac gccaccccaa agacggcgcg
     4321 gcgcgcgtgg cagcggagtt ttcgcgcgtc cccgtcatca acgccggcga cggcaccaac
     4381 cagcacccca gccagacctt gttggatctg gtaacgattt atgaaacgca gggacgtttg
     4441 gacaagctca aaatcgccat ggcgggcgac ttgaaatacg gacgtaccgt gcattcgctt
     4501 tgtcaggcgt tgaaacgctg gggctgcgaa tttgcctttg tttcgccgcc cagcctcgcg
     4561 atgcccgact acattaccga agagttggac gaagccggct gccgataccg tatcctcggt
     4621 agtttggaag aagcggcgga atgggcggac atcctgtata tgacccgtgt tcaacgcgaa
     4681 cgtttcgacg aacaggaatt tgccaaaatc caaggcaaat tcaatctcga cgcatccatg
     4741 cttgcccgcg ccaaaccgaa cctgcgcgtg ctgcaccctt tgccgcgcgt ggacgaaatc
     4801 catcccgatg ttgatgctac gccgcatgcc tattatttcg agcaggcgac caacggcgtt
     4861 tatgcgcgta tggcgatatt gtcgctggtg ttgaacgaag aagtgtgagg aaccgatatg
     4921 gaaaccccga aactcagtgt cgaagccatt gaaaaaggta cggttatcga ccatattccc
     4981 gccggcaggg ggctgaccat cctgcgccag ttcaaacttt tgcactacgg caacgcggta
     5041 accgtgggct tcaacctgcc cagcaaaacc caaggcagca aagacatcat caaaatcaaa
     5101 ggcgtgtgct tggacgacaa agccgccgac cgcctcgccc tgttcgcccc cgaagcggtg
     5161 gtcaatacca tcgacaattt caaggtcgtg cagaagcggc atttgaacct gcccgatgaa
     5221 attgccgaag tgttccgttg cccgaacacg aattgcgccg gccacggcga gccggtcaaa
     5281 agccggtttt atgttaaaaa acacaacggg cagacgcggc tgaaatgcca ttactgcgaa
     5341 aaaacctaca gccgggattc ggtggcggaa gcctgacgga ttcccttaaa ccgagcgggc
     5401 ggcatttcgt ctgccgcttg ttttgccaat ctgaaatgga atgatgatgc acgcttctgt
     5461 ccaaagccgt ttcgcaccga tactttatgt tttgattttc tttgccggtt ttttgaccgc
     5521 gcaaatttgg ttcaatcaga aagcctatac tgaagagctg cctccgcttc tgtccgcatt
     5581 gtccgccgtc gcgctggtgt ggctggcgtg ggcgttcgtg tcggcgcgtt caaaggctaa
     5641 ggcggaaaag ttctaccgcg aaaaaatgat acagaacgaa agcatacacc ccgtcctgca
     5701 cgcttctttg caacacttgg aacacaagcc gcaaatgctc gccctgctgg tcaaaaacca
     5761 cggcaaaggg atggcggaac aggtcaggtt caaggcggaa gtgctgcccg acgacgaaga
     5821 cgcgcgcacg attgccgccg agttggcaaa aatggatatg tttgcattgg ggacggacgc
     5881 ggtcgcctcg ggcgaaacct atggacgcgt gttcgccgat attttcgagt tgtcggcggc
     5941 tttggaaggg cgcgcgttca aaggaatgtt gaaactgacg gcggaatata aaaacatctt
     6001 cggcgatgcc tgccgttcgg aaacggcgtt ggatttgggc gcgctcaatc aggcgttgca
     6061 ggagatttca aaaacatcgg aaaagtccaa acggatattt tattgaagat ggaaaaatgc
     6121 cgtctgaaac ggaaggtgtt tcagacggca tttttgtcgg atgattaatt attcggagcg
     6181 gtcgaagcca aacttcacgc ggctgcggcc ctgatccggt atattgtcca aatcgcgtcc
     6241 cggattggcg gcggtgtcgc ctacggaaat atcggagatg ttttccaaaa tgatggcgga
     6301 cgacaggtgt tcggaggtgc ggtaaaccat tgccaagccc acttcttcgg caggagtgga
     6361 aatcagctcg acggtatccc tgcttttgaa attgttggag aggtcgacct gcatcgtttt
     6421 cttgcgtttg tagaggctca aaaccgtgcc tttgtccaaa ccgtccgcct cgcctttgtc
     6481 gatggtgatg gtttgaaact ggccggcaat ccttgtacct tcaaacacgg aaacgatttt
     6541 agcctgaacc gggcgggacg gttcgtgcgg catcatgttg aagcggtcgg tgtcttccgg
     6601 cattttcatc aggtagtcgc cctgctgtat ttcggaaatg gcggtttcga ccaccagcgg
     6661 ctgtatcgaa ggggtgcgca gcggggtaat caaaggatgg gtgcgggtat ggtattcgtt
     6721 gtctttcggc cgttctccag cctgtttcga gcgttgttcg aggacagagt cggtatagtc
     6781 gagggagcgc acgatgccgc tgaatgcgac ttcctgcccg aggaatttac ccgtatccgg
     6841 atcggtgatg tttttattga ttcggtaggt caggtagcgg cccggctctt tcaggccttt
     6901 ggtgtaaacc ctggtgcctt tggtgtacag cagcctgcct tccgggcccg agagcaggcg
     6961 cggcgcggca gcggtttctt tgcgggaaac gatttgcggg tgccgcataa agatgcggta
     7021 gaagttgaca tcgatggcgg gaataccgta tccggacact tccttatccg gactcatttt
     7081 gacgacgggg atgccgtctg tctgttccaa gccgaggcgc ggttcgccgt caacgtggcg
     7141 caacaccaat acctggtccg gataaatcag gtcgggattg tggatttgat cccggttcgc
     7201 gtcccacagg cggccccatt gccacgggct gtacaggtat ttgcccgaaa tgccccacag
     7261 ggtgtcgccc tgtttgaccg tgtagcgttc cggcgcgttc gggcgcacct ccaaatttgc
     7321 cgccaaagtt tgtgttgaga atgccatacc tgccgcgcag agcagggtta taatacgacg
     7381 ttgcataacc gttcccctta tctgataaat ttcggtttgt cttgcttgat tgggttggaa
     7441 aaagcggcgg cagcccctcg ggatgtgccg cgtgataaaa aatgttccgc attttaacat
     7501 cgaattatcc gcaccatcac ggtaattatg aaaaacaggc ggcgtatccg ccgaaggaaa
     7561 gagaaaatta tggctttatt gaatatcttg caatatcccg acgagcgtct gcacacggtg
     7621 gcaaagcctg tcgaacaagt cgacgagcgc atccggaagc tgattgccga tatgtttgaa
     7681 acgatgtacg aatcgcgcgg catcgggctg gcggcgacgc aggtcgatgt gcacgagcgc
     7741 gtggtcgtga tggatttgac cgaagaccgc agcgaaccgc gcgtgttcat caaccccgtc
     7801 atcgttgaaa aagacggcga aaccacttac gaagagggct gcctgtccgt gccgggcatt
     7861 tacgacaccg taacccgcgc cgaacgcgtc aaggtcgagg ctttgaacga aaaaggcgaa
     7921 aagttcacgc tggaggcgga cggcttgctg gcgatttgcg tgcagcacga gttggatcac
     7981 ctgatgggca tcgtgtttgt cgaacgcctg tcgcagctca agcaggggcg gattaagacc
     8041 aagctgaaaa aacgtcagaa acatacgatt tgaccctttt gccgtgccgt ctgaacgctg
     8101 caaagttttc agacggcacg gtcttgtccg acaattttac gcacacgcag gaacacgcta
     8161 tgaaagtcat cttcgccggc acgcccgatt ttgccgccgc cgccttaaga gccgttgccg
     8221 ccgccggttt tgaaatcccg ctggtgctga cccagcccga ccgtccgaaa gggcgcggta
     8281 tgcaactgac tgccccgccc gtcaaacaag ccgcgctgga actcggtttg cgcgtcgaac
     8341 agcccgaaaa actgcgtaac aacgccgaag ccctgcaaat gctcaaagag gtcgaggcag
     8401 acgtaatggt ggttgccgcc tacggtttga ttctgccgca agacgtgttg gatgtgccga
     8461 aacacggctg cctcaatatc cacgcctcgc tgctgccccg ttggcgcggc gcggcgccga
     8521 ttcagcgcgc gattgaggca ggcgatgccg aaaccggtgt gtgcattatg cagatggaca
     8581 tcggtttgga caccggcgat gtggtcagcg aacaccgcta cgccatccga cctaccgata
     8641 ccgccaacga agtccacgac gcgctgatgg aaatcggtgc ggcggcggtt gttgccgatt
     8701 tgcaacagct tcaaagcaaa ggccgtctga acgcggtcaa acagcccgaa gaaggtgtta
     8761 cttacgccca aaaactaagc aaagaagagg cgcgtatcga ttggagcgaa agcgcggcgg
     8821 ttatcgaacg caaaatccgc gccttcaacc ccgtgcctgc cgcgtgggtt gagtatcagg
     8881 gcaagccgat gaaaatccgg cgggcggaag tggtggcgca acaaggcgcg gcaggcgaag
     8941 tgttgtcctg ttcggcggac ggtttggtcg ttgcctgcgg cgaaaacgcg ctgaagatta
     9001 ccgaattgca gcctgccggc ggcaggcgga tgaatatcgc ggcgtttgcg gcgggacggc
     9061 atatcgaagc aggggcgaag ctgtaaatcc cttcagacgg cattccgatc cgcaaacggg
     9121 aatgccgtct gaaaccatca gtcgaagaaa gcgaatcaca taatatgagt atggcacttg
     9181 cccaaaaact tgccgccgac agcgttgccg cggttgccga agggcgcaat cttcaggatg
     9241 ttttggcgga aatccgcgcg gcgcatccgc agctgacggc gcaggaaaac ggcgcgttgc
     9301 aggatattgc ctacggttgc caacgttatt tgggcagttt gaagcacatg cttggtcaaa
     9361 tgctgaagaa gccgattgac aatccgcagc tcgaaagcct gcttttggca gcgttgtacc
     9421 aactgcatta cacgcgcaac gcgccgcacg ccgtggtcaa cgaagctgtt gaaagcatcg
     9481 ccaaaatcgg acgcgggcag taccgttcgt ttgccaacgc ggttttgcgc cgctttttgc
     9541 gcgaacgcga caagcttgca gcttcctgta aaaaagacga tgtggcgaaa cacaacctgc
     9601 cgctgtggtg ggtggcttac ctgaaaaacc attatccgaa acactggcac aacatcactg
     9661 ccgcgctgca atcccatccg ccgatgacgt tgcgcgtcaa ccgccgacac ggcaatgccg
     9721 aaagctattt ggaaaaactg gtggcggaag gtatcgcggc taaggcgttg gacgaatatg
     9781 cggttacgtt ggaagaagcc gtgccggtaa accgcctgcc cggtttttca gacggcatcg
     9841 tttcggtaca ggacttcggc gcgcagcagg cggcgtatct ccttaacccg aaagacggag
     9901 aacggatttt ggacgcgtgc gccgcgccgg gcggcaagac ggggcatatc ttggaactgg
     9961 cggattgccg cgttaccgcc ttggacatcg atgcaggccg tctgaagcgt gtggaggaca
    10021 atatcgcgcg cctgggcttt cagacggcat cggcggcgtg tgccgatgcg cgggatttgg
    10081 cggcgtggta tgatggaaag cctttcgacg caatccttgc cgacgtgcca tgcaccgctt
    10141 ccggcgtggc gcggcgcaat cccgacgtga aatggctgcg ccgtccgacc gacgcgctca
    10201 aaaccgcccg ccagcaggaa gccctgctgg acgcactttg gcagacgctg aaacagggcg
    10261 gcagaatgct gcttgccacc tgttccgtgt tcgtcgaaga aaacgacggg caattgcaaa
    10321 aattcctcaa ccgccatgcc gatgccgaac cgatcgaatc gcgggtgctt ttaccgaaca
    10381 aacaccaaga tggcttttat tacgcgctta ttcaaaagca ttaaacaatg gcttgtgctg
    10441 ctgccgatgc tttccgtttt gccggacgcg gcggcggagg ggatagatgt gagccgcgcc
    10501 gaagcgagga taaccgacgg cgggcagctt tccatcagca gccgcttcca aaccgagctg
    10561 cccgaccagc tccaacaggc gttgcgccgg ggcgtgccgc tcaactttac cttaagctgg
    10621 cagctttccg ccccgataat cgcttcttat cggtttaaat tggggcaact gattggcgat
    10681 gacgacaata ttgactacaa actgagtttc catccgctga ccaaccgcta ccgcgttacc
    10741 gtcggcgcgt tttcgacaga ctacgacacc ttggatgcgg cattgcgcgc gaccggcgcg
    10801 gttgccaact ggaaagtcct gaacaaaggc gcgctgtccg gtgcggaagc aggggaaacc
    10861 aaggcggaaa tccgcctgac gctgtccact tcaaaactgc ccaagccttt tcaaatcaat
    10921 gcattgactt ctcaaaactg gcatttggat tcgggttgga aacctctaaa catcatcggg
    10981 aacaaataat gcgccgtttt ctaccgatcg cagccatatg cgccgtcgtc ctgttgtacg
    11041 gactgacggc ggcaaccggc agcaccagtt cgctggcgga ttatttctgg tggatagtcg
    11101 cattcagcgc aatgctgctg ctggtgttgt ccgccgtttt ggcacgttat gtcatattgc
    11161 tgttgaaaga caggcgcgac ggcgtattcg gttcgcagat tgccaaacgc ctttccggga
    11221 tgttcacgct ggtcgccgta ttgcccggcg tgtttctgtt cggcgtttcc gcacagttca
    11281 tcaacggtac gattaattcg tggttcggca acgacaccca cgaagccctc gaacgcagcc
    11341 tcaatttgag caagtccgca ttgaatctgg cggcagacaa cgccctcggc aacgccgttc
    11401 ctgtgcagat agacctcatc ggcgcggctt ccctgcccgg ggatatgggc agggtgctgg
    11461 aacattacgc cggcagcttt acccagttgt ccctttacaa tgccgcaagc ggcaaaatcg
    11521 aaaaaagcat caacccgcac aagctcgatc agccgtttcc ggataaggcg cgttgggaaa
    11581 aaatccaaca ggcgggttcg gtcagggatt tggaaagcat aggcggcgta ttgtacgcgc
    11641 agggctggct gtcggcaggt acgcacaacg ggcgcgatta cgccctgttt ttccgccagc
    11701 cgattcccaa agacgtggca gaggatgccg tcttaatcga aaaggcgcgg gcgaaatatg
    11761 ccgagttgag ttacagcaaa aaaggtctgc agaccttttt cctggctacc ctgctgattg
    11821 cctcgctttt atcgattttt cttgcgctgg tgatggcatt gtattttgcc cgccgtttcg
    11881 tcgaacccgt cctatcgctt gccgaggggg cgaaggcggt ggcgcaaggc gatttcagcc
    11941 aaacccgtcc tgttttacgc aatgatgagt tcgggcgttt gaccaaactg ttcaaccata
    12001 tgaccgagca gttgtccatc gccaaagaag cggacgagcg caacaggagg cgcgaggaag
    12061 ccgccagaca ttatctcgaa tgcgtgttgg aggggctgac cacgggcgtg gtggtgtttg
    12121 acgaacaagg ccgtctgaaa acctttaaca aagcggcgga acagattttg ggtatgtcgc
    12181 tcgtgccgtt gtggggcagc agccggcacg gttggcacgg cgtttcggcg cagcagtccc
    12241 tgcttgccga agtgtttgcc gccatcggcg cggcggcagg tacggacaaa ccggtccaag
    12301 tggaatatgc cgcgccggac gatgccaaaa tcctgctggg caaggcgacg gtattgcccg
    12361 aagacaacgg caacggcgtg gtgatggtga ttgacgacat caccgtattg atacacgcgc
    12421 aaaaagaagc ggcgtggggc gaagtggcca aacgtctggc acacgaaatc cgcaatccgc
    12481 tcacgcccat ccagctttcc gccgaacggc tggcgtggaa attgggcggg aagctggacg
    12541 agcaggacgc gcaaatcctg acgcgttcga tcgacaccat catcaaacag gtggcggcgt
    12601 taaaagaaat ggtcgaagca ttccgcaatt acgcgcgcgc gccgtcgctc aaattggaaa
    12661 atcaggattt gaacgcctta atcggcgatg ttttggctct gtacgaagcc ggcccgtgcc
    12721 ggtttgaggc ggaacttgcc gacgaaccgc tgatgatggc ggcggatacg accgccatgc
    12781 ggcaggtgct gcacaatatt ttcaaaaatg ccgccgaagc ggcggaagaa gccgatatgc
    12841 ccgaagtcag ggtaaaatcg gaagcggggc aggacggacg gattgtcctg acggtttgcg
    12901 acaacggcaa agggttcggc agggaaatgc tgcacaacgc cttcgagccg tatgtaacgg
    12961 acaaaccggc gggaacggga ttgggactgc ccgtggtgaa aaaaatcatt gaagaacacg
    13021 gcggacgcat cagcctgagc aatcaggatg cgggtggggc gtgtgtcaga atcatcttgc
    13081 caaaaacggt agaaacttat gcgtagcagc gatattttaa ttgtagacga cgaagtcggc
    13141 atccgcgacc tgctgtcgga aatcctgcag gacgaaggct attcggtcgc attggcggaa
    13201 aatgccgaag aggcgcgcaa gctgcgccat caggcgcgtc ccgcgatggt gctgctggat
    13261 atttggatgc ccgattgcga cggcatcacg cttttgaagg agtgggcgaa aaacgggcag
    13321 ctcaatatgc cggtggtgat gatgagcggg catgccagca tcgataccgc cgtagaagcg
    13381 accaaaatcg gcgcgatcga ttttttggaa aaaccgattt ccctgcaaaa gctgctgtct
    13441 gccgtcgaaa acgcgttgaa acatggtgcg gcgcaaatcg aaacgggacc ggtgttcgac
    13501 aagctgggca acagtgccgc gattcaggag atgaaccgcg aagtcgaagc ggcggcaaag
    13561 cgcacgtccc ctgtattttt gacgggcgaa gcaggttcgc cgtttgaaac cgtggcgcgc
    13621 tatttccata aaaacggtac gccgtgggtc agtccggcaa gggtcgaata tctgattgat
    13681 atgccgacgg aactgttgca gaaagctgaa ggcggtgttt tatatgtggg cgatattgcc
    13741 caatacagcc gcaacatcca agccggcatt gcctttattg tcggcaaggc ggaacaccgc
    13801 cgcgtcaggg tggtcgcatc gggcagcagg gcggcaggtt cagacggtat tgcctgcgag
    13861 gaaaagctgg cggaactgct gtcggagtcg gtcgtccgca ttccgccgct gcgtatgcag
    13921 catgaagata ttcccttcct gatacagggg attgcctgca atgtggcgga aagtcaaaag
    13981 attgcgcccg ccgcattcag tgaagaggca cttgccgcat tgacccgtta cgactggccg
    14041 ggaaatttcg accaactgca aagcgtcgtt gcaacgctgt tgttggaggc ggacggacag
    14101 gaaatcggcg cggcggcggt ttcttccctt ttggggcaga atgtgcctgc cgagggagcg
    14161 gaagatatgg tgggcgggtt taatttcaac ctgcccctgc gcgaattgag ggaggaggtg
    14221 gagcggcgtt atttcgagta ccacatcgcc caagaaggtc agaatatgag caaagtggcg
    14281 cagaaagtcg gtttggaacg cacgcacctt taccgcaaac tcaaacagct cggcatcggc
    14341 gtttcgcgcc gggcggggga aaaaaccgaa gaataggccc ggacggccgg ttttccggct
    14401 gcgggctttt gttttcagac ggcatttggt gcaaatgccg tctgaaatcg taaggggacg
    14461 gattttatga cagaggacga acgtttcgcg tggctgcaat tggcgtttac gccctatatc
    14521 ggcgcggaaa gcttcctgct gctgctgcgc cgtttcggca gcgcgtcaaa cgccctgtcc
    14581 gcaccggcgg aacaggtcgc cccggcggtg cggcacaagc aggcggccga ggcttggcgc
    14641 aatgcggaaa aacgcgcttt ggcgcggcag gcggcagaag cggcgttgga atgggaaatg
    14701 cgggacggat gccgcctgat gctgcttcag gatgaagatt tccccgaaat gctgacgcag
    14761 gggctgaccg cgccgccggt tttgtttttg cgcggcaacg tgcggctgct gcacaagcct
    14821 tccgccgcca tcgtcggcag ccgccatgcc acgccgcagg cgatgcggat tgccaaagat
    14881 ttcggcaggg cgttgggaga gaaaggcatt cccgttgtgt cgggtatggc ttcgggcatc
    14941 gataccgccg cccatcaggg tgcgttgcag gcggaaggcg gcaccatcgc cgtgtggggg
    15001 acgggcatag accgcattta tccgccgtcc aataaaaacc ttgcctatga aatcgccgaa
    15061 aaaggactga ttgtcagcga gttccccatc ggcacgcgcc cgtatgccgg caattttccg
    15121 cgccgcaacc gcctgattgc cgcgctgtcg caggttacgc tggtggttga agccgccttg
    15181 gaatccggtt cgctgattac cgccggcttg gcggcagaaa tggggcgcga agtgatggcg
    15241 gtacccggct cgatagacaa tccgcacagc aaaggctgcc acaaactgat taaagacggc
    15301 gcgaaactga cggaatgttt ggacgacatc ctgaacgaat gcccggggct attgcaaaat
    15361 acgggtgctt catcatattc tataaataag gatacgcccg acacgggccg ccgcgccgtt
    15421 cagacggcat acgccccgcc gcctgccgca aaaatgccgt ctgaaggggc ggcaggcggc
    15481 acagccgtcg gcggcatact ggataaaatg ggtttcgacc ccatccatcc cgacgtgctt
    15541 gccggacagt tggctatgcc tgccgcagat ttgtatgccg cactgttgga attggaattg
    15601 gacggcagcg ttgccgcaat gcccggcggc agataccagc gtatccgaac ttgaacgcac
    15661 tttatattaa ggaacacgaa tgaccgaagt catcgcctac ctcatcgaac atttccaaga
    15721 tttcgatacc tgtccgccgc ccgaagactt gggtatgctg cttgaagaag cgggtttcga
    15781 tacgatggaa atcggcaaca ccctgatgat gatggaagta ttgctcaaca gctccgaatt
    15841 ttccgccgaa cctgccgaca gcggcgcatt gcgcgtgtac agcaaagaag aaaccgacaa
    15901 cctgccgcag gaagtgatgg ggctgatgca gtatctgatt gaagaaaaag ccgtcagctg
    15961 cgaacagcgg gaaatcatca tccacgcgct gatgcacatt ccgggcgacg aaattaccgt
    16021 agataccgcc aaagtgctga ccctgctgct tttatgggca aacaagagcg agctgcccgt
    16081 gttggtcggc gacgagctga tgagcgcgct tttactcgac aacaaaccca cgatgaactg
    16141 aagcggcttc agacggcatt atcctgctaa cctgccgtct gaaacgccgg catcaaaacc
    16201 accatccaga gaacgacaaa tggcgaaaaa cctattaatc gtcgaatccc cgtccaaagc
    16261 caaaaccctg aaaaaatatt tgggcggcga ttttgaaatc cttgcatcct acggacacgt
    16321 ccgcgacctc gtccccaaaa gcggcgcggt cgatcccgac aacggctttg cgatgaaata
    16381 ccaactcatc agccgcaacg gcaaacacgt cgatgccatc gtcgccggtg ccaaagaagc
    16441 tgaaaacatc tacctcgcca ccgacccgga tagggaaggc gaagccattt cctggcatct
    16501 tttggaaatc ctcaaatcca aacgcggctt gaaaaacatc aagccgcagc gtgtcgtgtt
    16561 ccacgaaatc accaaaaacg ccgtgctcga tgccgttgcc catccgcgcg aaatcgaaat
    16621 ggacttggtg gatgcacaac aagcccgtcg cgctttggac tatttggtcg gctttaacct
    16681 ttcgccattg ttatggaaaa aaatccgccg cggtttgagc gcaggccgcg tgcaaagccc
    16741 cgctttgcgc ctgatttgtg agcgcgaaaa cgaaatccgc gcgtttgaag cgcaggaata
    16801 ttggacggtg catctcgaca gccacaaagg ccgcagcaag ttcaccgcca aactcgccca
    16861 atacaacggc gcgaaactcg aacaattcga cctgccgaac gaagccgcgc aagccgacgt
    16921 gttgaaagaa ctcgaaggca aagaggccgt cgttaccgcc attgaaaaga aaaagcgcag
    16981 ccgcaatcct gccgcgccgt tcaccacttc taccatgcag caggatgccg tgcgcaaact
    17041 cggcttcacc accgaccgca ccatgcgtac cgcccaacag ctttatgaag gtatagacgt
    17101 agggcagggc gcgatcggtc tgattaccta tatgcgtact gacagcgtga atttggcgga
    17161 tgaagcgtta accgaaatcc gccattacat cgaaaacaaa atcggcaaag aatatctgcc
    17221 gagtgccgcc aaacaataca aaaccaaatc caaaaacgcc caagaagcgc acgaagccat
    17281 ccgtccgact tccgtgtacc gtacgcccga aagcgtcaaa cccttcctga gcgcagacca
    17341 gttcaaactc tatcaaatga tttggcagcg taccgtcgcc tgtcagatga cgcctgccaa
    17401 attcgaccaa accaccgtcg atattaccgt cggcaaaggc gtattccgcg taaccggaca
    17461 agtgcaaacc ttcgcaggct tcttgagcgt ttatgaagaa agcagcgacg atgaagaagg
    17521 cgaagacagc aaaaaactgc ccgaaatgag cgaaggcgat aaattgcccg tggacaaact
    17581 ctacggcgaa caacacttta ccactccgcc gccgcgctac aacgaagcca cgctggttaa
    17641 agccctcgaa gaatacggca tcggccgccc ctcgacctac gccagcatca tctccacgct
    17701 caaagaccgc gaatacgtta cccttgagca aaaacgcttc atgcccaccg acacaggcga
    17761 catcgtcaac aaattcctga ccgaacactt cgcccaatac gtcgattacc acttcaccgc
    17821 caaactcgaa gaccagcttg acgaaattgc cgacggcaaa cgccaatgga ttcccttgat
    17881 ggacaaattc tggaaaccgt tcatcaaaca agtggaagaa aaagaaggca tcgaacgcgc
    17941 caaatttacc acgcaggaac ttgatgaaac ctgcccgaaa tgcggcgaac acaaactgca
    18001 aatcaaattc ggcaaaatgg gtcgttttgt tgcgtgtgcc ggttatcccg agtgcagcta
    18061 cacgcgcaat gtcaacgaaa ccgccgaaga ggccgccgag cgcatcgcca aagccgaagc
    18121 cgaacaggcc gaactcgacg gacgcgagtg cccgaaatgt ggcggtcgcc tagtgtacaa
    18181 atacagccgc accggcagca aattcatcgg ctgcgccaac tatccgaaat gcaaacacgt
    18241 cgagccgctg gaaaaaccga aagataccgg cgtccagtgt ccgcaatgca aaaaaggcaa
    18301 cctcgtcgag cgcaaatccc gctacggcaa actgttttac agttgcagca cctatcccga
    18361 ctgcaactac gccacttgga acccgcccgt tgccgaagaa tgcccgaact gccattggcc
    18421 ggtcttgacc atcaaaacca ccaaacgctg gggcgtcgaa aaagtctgcc cgcaaaaaga
    18481 atgcggctgg aaagaacaga ttgaaccgcc cgcgccgaag gagtaagatt aggttggttt
    18541 gaaagagaaa aggtcgtctg aaaaattttc agacgacctt tgcttttctg tgattggttt
    18601 atttgaatcc gcgtgttgtt ttaaagtccg ataaaatccg gttcatttca ggcacaaaca
    18661 aggcgatgta atcgtaagat agaccgcgac tggcactggg atggggaaag cagacgactt
    18721 cgcaatcttc aaacgattgg aatttgacat tgaaacgtgt accgtcaaat tctttttgca
    18781 ccgtctccag cggtttggtc tgcttaccga ccaactgctc gaagcgtggc agtacatttt
    18841 ggttgttcag aaaatccgcc aacctgctgc ccatgaagag gatgactttc ggacgcagtt
    18901 tttcgatgtg gtagagaaaa ttatcgatgt gctcgggttg tgtgaacttg tcgggattgt
    18961 cgatagtgtt gccctgtgta gcagcccagt tggtttgaac cagggatttt tcaaatgcac
    19021 cgcccaatcc attttcgtct aaggggtgtc cccacatttc aaaccaattt tttatcgtat
    19081 tgtcgtaacg ccactttttt gcctgctctc cgaaatagag ggatttgttt gcaaatgtat
    19141 ggtcgatttt gttttcaggg agtttgtatt cacctgctac ataagcagcc tcatcggctt
    19201 tactccaacc ccattcatag ccacaaatca ttaagccatg tttgtcgttg tagcctttga
    19261 acaggctgtt gctcaaattc aaatccttca tcatgaactc ttccttttaa aatttaagag
    19321 cgattgactt caatgttttt agatggggtg gaaaaatcct tgtgtaggca acataaattc
    19381 aataaatttc ttgataattc gaaacctact aatagcgcac ctataaaagc tttttcatta
    19441 cgttcagcat gacggtcacg tcgttcatat tttttacgct tgctgttccc tgttattaca
    19501 gctaagccaa gtgatatggc gagaattgcc caaacaatag tacttaataa caattttccc
    19561 catactatca atagggaaag aaaaaacctt ttagtattag gtcgatagat tataatccat
    19621 gcccatgaaa atgcaataag agttatacat aagatacaag ctgataggat ttctttattt
    19681 ttaattaaat aacttagggc gatgaggatg acaggtgtca agaaaacaat agttacatcc
    19741 cgatagctat aaaagaaaac tgccccattt tgaatgtgga aatgtgcaca gaatccaata
    19801 tagctaagga taatagttaa tataataaaa aaagaccacc aagggtgaag agataggaat
    19861 tccatgtttt cccttttttt gtaaaaagga aaaaatctta tctaatagtt aattgcctaa
    19921 ccagccagaa gaagtttaaa atctatccca ataattcaac catctataca gaaagttcag
    19981 cttatggaaa cccacgaaaa aatccgcctg atgcgcgaat tgaataaatg gtcccaggag
    20041 gatatggcgg aaaagctggc gatgtcggca ggcgggtatg ccaaaatcga acgaggcgaa
    20101 acgcagttga atatcccgcg tttggagcag ttggctcaga ttttcaaaat cgatatgtgg
    20161 gacttgctca aatcgggcgg tggtgggatg gtgtttcaga ttaatgaagg tgatagtggt
    20221 ggcgatattg cgttgtatgc gtcgggtgat gtttcgatga aaatagaatt tttaaaaatg
    20281 gagttgaaac actgcaaaga aatgttggaa caaaaagaca aagaaatcga gctgctccgc
    20341 aagctgaccg aaaccgttta aacagatatg ccgtctgaaa aaagttttca gacggcatat
    20401 tctttgacag gtcttgtata ataccgtttg aacttacagg tttttgatta tggcggcagg
    20461 caaacatacc aaacacagca accgggtacg cattatcggc gggcaatgcc ggggcaggaa
    20521 attgagtttc acatccgccg acggactgcg tccgacaccc gacagcgtgc gtgaaaagct
    20581 gtttaactgg ctgggacagg atttgacggg taaaacggtt ttggatctct tcggaggcag
    20641 cggcgcactc ggtatagaag ccgcttcgcg caacgccaaa cgcgtgctga tttcggataa
    20701 caaccgccaa accgtgcaga ccttgcagaa aaacagtcgc gaactgggtt tggggcaggt
    20761 gcaaatcgtc ttttcagacg gcatcgcata tttgaagacc gtatccgaac agtttgatgt
    20821 tgtctttctc gacccgccgt ttgcatggca ggactggcaa atcctgttcg atgccttgaa
    20881 gccgtgcctg aacccccggg cattcgtcta tctcgaggcg ggtacgctgc cgaatattcc
    20941 cgattggctg acggaatata gagaagggaa atcggggcag agtacattcg aattaagggt
    21001 tttccaagtg gctgaataat atgcgctttg ataatcattt ccgagttgta aacattcgtt
    21061 tgcaaccgtc cggttcaaaa aaaccttgtg ctataatccg cgcccgcccg gttttgataa
    21121 tttagtggaa aaggaaaaga aatgtcgctt tttattaccg acgagtgcat caactgcgac
    21181 gtatgcgaac ccgaatgccc caatgatgcc atttcccaag gcgaggaaat ttacgaaatc
    21241 aaccccaacc tctgcacgca gtgcgtcgga cactacgatg agccgcagtg ccagcaggtt
    21301 tgcccggtgg actgcatcct gattgacgaa gaacatcccg aaacccatga cgagttgatg
    21361 gcgaaatacg aaaagattat ccagtttaaa taaattcttt ttaaaacatc aaattatgtc
    21421 tgttttgaaa taaaatcaaa aaaaaacttg acggaaaagc aagccgctaa taaactaacg
    21481 ttctcttttg gagggattcc cgagcggtca aagggggcag actgtaaatc tgttgcgaaa
    21541 gcttcgaagg ttcgaatcct tctccctcca ccaaaattct tacttggggc agtagcgagt
    21601 aatgcgggtg tagctcaatg gtagagcaga agccttccaa gcttacggtg agggttcgat
    21661 tcccttcacc cgctccaaac aattaggccc atgtagctca ggggtagagc actcccttgg
    21721 taagggagag gtcggcagtt caaatctgcc catgggcacc atccctcgat tattcatttc
    21781 tttaaggctt agatatatag gatattg
//
LOCUS       DBBZYD010000024        21197 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.024, whole genome shotgun sequence.
ACCESSION   DBBZYD010000024 DBBZYD010000000
VERSION     DBBZYD010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21197)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21197)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21197
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.024"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(1..218)
                     /locus_tag="ACJJDL_000759"
                     /pseudo
     CDS             complement(1..218)
                     /locus_tag="ACJJDL_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(247..576)
                     /locus_tag="ACJJDL_000760"
     CDS             complement(247..576)
                     /locus_tag="ACJJDL_000760"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7573514.1"
                     /translation="MGGLIIEDLQEGFGKEAVKGKEITVHYTGWLENGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLAIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            complement(654..872)
                     /locus_tag="ACJJDL_000761"
     CDS             complement(654..872)
                     /locus_tag="ACJJDL_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HGG7573515.1"
                     /translation="MLKTLTFAALHFSTAFSVTYVLTGSIGVSGAVALVEPLINTVVF
                     YFHEKAWNLYEKNKTVQQTQPFQLHRCS"
     gene            994..1947
                     /locus_tag="ACJJDL_000762"
     CDS             994..1947
                     /locus_tag="ACJJDL_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HGG7573516.1"
                     /translation="MNHKKIVVLDADTLPGRVFHFDFPHELAVYGTTGADETAERVRD
                     AHIIITNKVMISADIIAHAPQLELIAVSATGVNNVDIEAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLARYAQAFGMRVVFAEHKHAPVVREGYVSFEDAVQTADVLSLHCPLNAQTENMIGEN
                     ELQQMKPGAVLINCGRGGLVDENALVAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(2022..4079)
                     /gene="metG"
                     /locus_tag="ACJJDL_000763"
     CDS             complement(2022..4079)
                     /gene="metG"
                     /locus_tag="ACJJDL_000763"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HGG7573517.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLDECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGVDFDEYFKADSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRLKDVSGSALLAKLAAESDTIAEQYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPILPKVAEN
                     AAKFLNLEAITWANTRETLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EESQYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYLNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(4195..6033)
                     /gene="glmS"
                     /locus_tag="ACJJDL_000764"
     CDS             complement(4195..6033)
                     /gene="glmS"
                     /locus_tag="ACJJDL_000764"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HGG7573518.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPTDVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAQSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSGEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKSSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGELSPVVHTVPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            6315..6833
                     /locus_tag="ACJJDL_000765"
     CDS             6315..6833
                     /locus_tag="ACJJDL_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573519.1"
                     /translation="MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVFTGKEESMLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQHQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLF"
     gene            complement(7083..7145)
                     /locus_tag="ACJJDL_000766"
                     /pseudo
     CDS             complement(7083..7145)
                     /locus_tag="ACJJDL_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(7251..8576)
                     /locus_tag="ACJJDL_000767"
     CDS             complement(7251..8576)
                     /locus_tag="ACJJDL_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HGG7573520.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPAPAGTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFF
                     RELTGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            8788..9627
                     /gene="efeU"
                     /locus_tag="ACJJDL_000768"
     CDS             8788..9627
                     /gene="efeU"
                     /locus_tag="ACJJDL_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
                     /protein_id="HGG7573521.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGIGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKQQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIVVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVMTWFLCGSRPSETLTRKE
                     ELK"
     gene            9624..10790
                     /gene="efeO"
                     /locus_tag="ACJJDL_000769"
     CDS             9624..10790
                     /gene="efeO"
                     /locus_tag="ACJJDL_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HGG7573522.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRIHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            11054..12319
                     /gene="efeB"
                     /locus_tag="ACJJDL_000770"
     CDS             11054..12319
                     /gene="efeB"
                     /locus_tag="ACJJDL_000770"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HGG7573523.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGDITPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(12388..12720)
                     /locus_tag="ACJJDL_000771"
     CDS             complement(12388..12720)
                     /locus_tag="ACJJDL_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HGG7573524.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNKTESAAAEAAEEV
                     RDANGAVLQNGDTIILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIACKIDGSAMNL
                     KSEFVKKA"
     gene            complement(12795..14165)
                     /gene="glmU"
                     /locus_tag="ACJJDL_000772"
     CDS             complement(12795..14165)
                     /gene="glmU"
                     /locus_tag="ACJJDL_000772"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HGG7573525.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     ARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(14220..14492)
                     /locus_tag="ACJJDL_000773"
     CDS             complement(14220..14492)
                     /locus_tag="ACJJDL_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HGG7573526.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPIYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(14468..15199)
                     /locus_tag="ACJJDL_000774"
     CDS             complement(14468..15199)
                     /locus_tag="ACJJDL_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HGG7573527.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGLFTLINRAMTRYMTRRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDEVLTRLHGMPETQNTLSR
                     LKGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKVHDLPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTTPRKYERMLCVKPSLS"
     gene            15258..16259
                     /locus_tag="ACJJDL_000775"
     CDS             15258..16259
                     /locus_tag="ACJJDL_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7573528.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            16353..17201
                     /locus_tag="ACJJDL_000776"
     CDS             16353..17201
                     /locus_tag="ACJJDL_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HGG7573529.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            17227..17712
                     /locus_tag="ACJJDL_000777"
     CDS             17227..17712
                     /locus_tag="ACJJDL_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HGG7573530.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGLLAAVFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(17814..19382)
                     /gene="msrAB"
                     /locus_tag="ACJJDL_000778"
     CDS             complement(17814..19382)
                     /gene="msrAB"
                     /locus_tag="ACJJDL_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HGG7573531.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            19528..20793
                     /gene="ftsY"
                     /locus_tag="ACJJDL_000779"
     CDS             19528..20793
                     /gene="ftsY"
                     /locus_tag="ACJJDL_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HGG7573532.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         4524 a         5296 c         6345 g         5032 t
ORIGIN      
        1 tggtttgtgc aaccggcagt tgattcatcg cggcaggttg acggcaggtg cttggggtcg
       61 atctgcttgt cgctggcggc ggtaacggcg gtgtcggtgt cggtgtcggc gcgcgtaacc
      121 ggctgtccgc agaaccattt taccgaaccg tcttgacgct tggcccacag ggagagtttt
      181 ttgtctttga tttcgttgtt tacgccgctt gaagccatta tgtcagacgg tattgcccgg
      241 gcagctttat tcgtacactt tcagcagctc gacttcaaat atcaaagtgg cgtgcggggg
      301 aatcacgccg cccgcgccgt gtgcgccgta gcccatttcc gaagggatgg ccagcttgcg
      361 tttgccgcct tccttcatgc cgccgaagcc ttcgtcccag cctttgatga cttgtccgac
      421 accgagcgtg atggtcagcg gctggcggcg gtcgaggctg gagtcgaatt tggttccgtt
      481 ttccagccaa cctgtgtaat gcacggtaat ctctttgcct ttaactgctt cttttccgaa
      541 gccttcttgc aagtcttcaa taatcaggcc gcccatattt gtcctttcgt tgcttgttgg
      601 tcaaaacggc aagggtaaca taccgtccgt cgaagtcaaa tgccgctcaa acgtcagctg
      661 catcggtgca gctgaaacgg ctgtgtttgt tggactgttt tatttttttc gtaaaggttc
      721 catgcttttt catggaaata gaaaacgacg gtgttgatta ggggctcgac cagcgcgacc
      781 gcccccgata cgcctatact gcccgtcagt acataggtta cactgaaggc ggtgctgaaa
      841 tgcagtgcgg caaaagtcag ggttttaagc atcatcctct cccgaattgg acattgacgg
      901 aggaatgata aaggttatca taaggttgcg cggtttaaat ttgctatttg ttgttagtgt
      961 aaataaatca tttttcaaat ggggatagaa attatgaatc ataaaaagat cgttgttttg
     1021 gatgcggata ctttacccgg ccgggttttt cattttgatt ttccgcacga gcttgcggtt
     1081 tacggtacga caggtgcgga tgaaacggca gaacgggtgc gcgacgcgca tattatcatc
     1141 accaataaag tgatgatttc agcggatatc attgcacacg ctccgcaact tgaattgatt
     1201 gccgtcagtg cgaccggtgt gaacaatgtc gatattgagg cggcgaaggc ggcgggcgtt
     1261 gcggtatgca atgtccgcgc ctacggaaac gaatcggttg cggaacacgc ctttatgctg
     1321 atgattgcgt taatgcggaa tttgcccgcc tatcagcgtg atgttgcggc aggattatgg
     1381 gaaaagtcgc cgtttttctg ccattatggc gcgccgattc gggatttgaa cggtaaaacg
     1441 ctggcggttt tcggacgcgg caatatagga cggacgcttg cccgatatgc acaggcattc
     1501 ggtatgaggg tagtgtttgc cgaacacaaa cacgcgcccg ttgtgcgtga aggctatgtt
     1561 tcctttgaag atgcggtaca gactgccgac gtgttgtcgc tgcactgtcc gctgaacgcc
     1621 caaactgaaa atatgatagg cgaaaacgaa ttacagcaga tgaagcccgg tgcggttttg
     1681 atcaattgcg ggcgcggtgg gctggtggat gaaaatgcgc tggttgccgc actcaaatac
     1741 gggcagattg gcggggcagg tgtcgatgtt ttgacggagg aaccgcctag gggcggcaat
     1801 cccttgctga atgcacgact tcccaatctg attgttacgc cgcataccgc gtgggcaagt
     1861 cgtgaagcgt tggacaggct gttcgatata ttgttggcga acattcacgc ctttgtgaaa
     1921 ggcgaggcgc aaaaccgcgt ggtttgaacc tgtcgggatt gcggaaaaaa atgccgtctg
     1981 aacgcctcaa gggttcagac ggcatttttt gagatttctg cttaaccgac tttgtcgccc
     2041 ggttgcgcgc ctgcatccac atccaagagc ttcagtttcc cgtctgccgt ggcggcagag
     2101 agaatcatgc cttcggatac gccgaatttt gccattttgc gcggggcgaa gttggcgacg
     2161 gcgatgacca tccttccgtt taactcggca gggttcaggt aagacgcggc gatgccggag
     2221 aagatgatgc gtttttcaaa accgaaatcg aggtcgaatt tcaaaagttt ggtgctgcct
     2281 tcgacagctt cgcagttcaa tactttggca acgcgcatat cgattttcat aaagtcgtcg
     2341 aagcttgcct gttcggcaac tttttcgtat tgactttctt cggcggcagg tgcggctgcg
     2401 gcggcgatgc tttgtttgtt ggcttcgatt aaatcgtcca cttgtttttg ctccactcgt
     2461 tgcatgagat gttcgtattt gttgatggcg tgttcgccca aggtttcgcg tgtgtttgcc
     2521 caagtgatgg cttccaaatt caggaatttg gcggcgtttt cggccacttt cggcaagatg
     2581 ggggcaaggt aggcggtcag catggtaaag gcgttgatga gttcgctgca tacttcgtgc
     2641 aggcgttcgt cttggccttc ttgtttcgcc agttcccaag gtttgttggc atcgacgtat
     2701 tcgttgacaa tgtctgccaa ggccatgatg tcgcgcaggg cgcgggcgta ttcgcggttt
     2761 tcgtattgct cggcgatggt gtcgctttcg gcggcaagtt ttgccagcaa tgcgctgcct
     2821 gaaacgtctt tcagacggcc ttcaaagcgt ttggcgatga aacctgatgc gcgggcggcg
     2881 atgttgacgt atttgccgac gaggtcgctg tttacgcgcg aaataaagtc ttgcaggttc
     2941 aaatcgatgt cttcgatttt gctgttgagt tttgcggcga tgtagtagcg catccactcg
     3001 gggttcaggc cttgttccaa ataagatttg gcagtgatga aggtgccgcg cgatttggac
     3061 attttttgtc cgtctacggt caaaaagccg tgtgcgtaca cgccggtcgg ggcgcggtgg
     3121 ccggagaaat gcagcatggc aggccagaac agggcgtgga aatagaggat gtctttgccg
     3181 atgaagtggt acatctcggt ttggctgtcg gctttgaagt attcgtcaaa atcgacgccg
     3241 atgcggtcgc acaggttttt aaacgacgcc atgtagccga cgggcgcgtc cagccagacg
     3301 tagaagtatt tgcccggcgc gtcggggatt tcaaaaccga aatacggtgc gtcgcgggaa
     3361 atgtcccagt cggacagggt ggtttcttcg ccttcgccca gccattcttt cattttgttg
     3421 agggcttcgg gttgcagatg gggcttgccg tcgtgcggat tgttgccgga agtccatgct
     3481 ttgaggaagt cggcgcattc gtccagtttg aagaagaagt gttcggattc gcgcaattcg
     3541 ggtttggcac cggaaacggc ggaatacgga ttaatcagtt cggtcgggga ataggtcgtg
     3601 ccgcagactt cgcagttgtc gccgtattgg tcttgggcgt ggcatttcgg gcattcgcct
     3661 ttaacgaaac ggtcgggcag gaacatttgt ttttcagggt cgaaaagctg ctcgatgacg
     3721 cggctttcga ttttgccgtt ggctttcagc gcgcggtaaa tgtcttggga aaactgtttg
     3781 ttttcagggg aatgggtgct gtaataattg tcgtagccga tgttgaaacc ggtaaagtcg
     3841 gcgaggtgct cttcgcgcac tttggcaatc atgtcttcgg gcgcgatgcc ttgtttttgc
     3901 gcggcaagca tcacgggcgt gccgtgggtg tcgtcggcgc agcagtagta gcattcgtgg
     3961 ccgcgcagtt tttggaagcg cacccaaacg tcggtttgga tgtgttcgac catgtggccg
     4021 aggtggatgc tgccgttggc atagggcagg gcggaggtaa ctaagatttt gcgtgtcata
     4081 ttgtgctttg caaacaatgg gtaaaggcgg attataccgc aaatcaaacg gggaaatgcc
     4141 gtctgaagcc tgaaaaatcg ggcttcagac ggcatttttg ccaaccggcg gtatttattc
     4201 gacggttacg gatttcgcca ggttgcgcgg cttgtccaca tccgtgccgc gcgcgagggc
     4261 ggtgtggtag gcgaggagct gcacggggac agtatgcacg acgggggata attcgccgac
     4321 atggcgcggt gcgcggatga cgtgcacgcc ttcggtggca ttaaaattgc tgtcgaggtc
     4381 ggcaaagacg aaaagttcgc cgccgcgcgc gccgacttcc tgcatattgg ctttgacttt
     4441 gtccaacagg ctgtcgttgg gcgcaatgac gacgacgggc atattttcgt ccaccagggc
     4501 aagcggcccg tgcttcagtt cgccggcagg ataggcttcg gcgtggatgt aggtgatttc
     4561 cttcagtttc aacgcacctt cgagggcaat cggataatgg atgccgcgcc ccaaaaacag
     4621 cgcgctgctt ttcttggcaa actgttgcgc ccaagcggca atttgcggtt cgaggtttaa
     4681 agcgtgctgc acgctgccgg gaagctggcg gagttcttcg gtgtaacgtg cttcatcttc
     4741 gccggatacc aagccgcgta ccttcgccag cgttaccgcc aaaccgaaca gtgcaaccag
     4801 ttgcgtggta aatgctttgg tcgaggcgac gccgatttcc gcaccggcgc gagtataaag
     4861 cacgaggctg ctttcgcgcg gcagggcgga ttccatcacg ttgcagatgg agaggctgtg
     4921 gcggtgtccc aaggattggg cgtatttcaa agcctccatc gtgtccagcg tttcgccgga
     4981 ttgggaaatg gtaatgacca gttggtccgg atcggcaatc acgctgcggt atcggtattc
     5041 gctggcgatt tcgacgtcgg tcggaatttt ggcgatggat tcgagccagt atttggcggt
     5101 cagcgcggcg taataggacg tgccgcaggc aaggattttg acgctgcgga tgctttcaaa
     5161 cacgcttttg gcgtttttgc cgaagttttc ggggatgaag ccgccgtcga ggaaaacctc
     5221 cgccgtgtct gcaatcgcgc ggggctgctc gtggatttcc ttttgcataa agtggctgta
     5281 cggccccagc tccaaagagg cgagcgagag ttcggatacc ttgactttgc gttcggcagg
     5341 caggccgttt ttatcggtca gccttttgat gccgtctgaa gccagcagtg cgatgtcgcc
     5401 gtcttcaagg tacgccacgc ggcgcgtaaa ggcgatgacg gcggacacgt ccgaagcgat
     5461 aaaggtttca tcgtcgccca aagcgaccaa aagcgggcag cccatacgcg ccacaactaa
     5521 ttcatcaggc ttgtcttggg caataaccgc gatggcgtat gcgccgtgga aacgtttgac
     5581 cgcttcctgc acggcttcaa acagcctgcc gccgttttgc gcgtattcgt gattgatgct
     5641 gtgggcgatg acttcggtat ccgtttgcga ttcaaaccgg tatcccaaac cttccaagcg
     5701 tttgcgttcg ctttcaaagt tttcgatgat gccgttgtgg acgacggcta tcatcccacc
     5761 ggaaatatgc ggatgggcat tcggctcggt aacgccgccg tgtgtcgccc aacgcgtatg
     5821 cccgatgccg atgccgccgc tgatgccttt ttcgcgtgct gcgtcttcca taagctgcac
     5881 gcgtccgacg cggcgcacgc gtttgatttt gccgtcggtg ttgacggcaa tgcctgatga
     5941 gtcataaccc cggtattcga ggcgtttgag gccgtcggtc agaaaatcga cgacgttgtg
     6001 atgggcgcgg atggcgccga cgataccgca cataactgtt ccttagtatc cggttgaaaa
     6061 aaaacaggcg cggacggctc ccgtgccgca ccttcctctt cggattataa accgcctccc
     6121 gcgccgaaaa acagcaaaat gccgtctgaa ggcttgggct tgctcaaaaa agggagggat
     6181 ttccccgcct gaccgggatg ggcgttcaga cggcattgcc tgccgccggt ttatagtttt
     6241 tacaaatcaa tattgacaag ctgaaaaaaa aaaacaatat actcgctcgg tcttaatgtt
     6301 aacggagtat ggaaatgaaa caaatgcttt tagccgtcgg cgtggtggcg gtgttggcgg
     6361 gctgcggcaa ggatgccggc ggttacgagg gttattggcg cgaaaaatcg gacaaaaaag
     6421 agggtatgat tgccgtcaaa aaagaaaaag gcaattactt ccttaataaa atcaacgtgt
     6481 ttacaggtaa ggaagaatct atgcttttgt ctgaaaaaga cggcgcgctt tcgataaaca
     6541 cggggatagg ggaaatcccg atcaaacttt ccgatgacgg gaaagagctg tatgtcgaac
     6601 gcaggcagta tgtcaaaacc gatgcggcga tgaaggacaa aatcatcgcc catcagaaaa
     6661 agtgcggaca aacggcacag gcatatctcg acgcgcgaaa tgcgttgccg tcaaaccaga
     6721 cgtatcagca gcatcaggcg gcgatcgagc agttgaaacg gcggtttgaa gccgagtttg
     6781 acgaattgga aaaagaaatc aaatgcaacg gcaaaccgac attgttgttt tagcgtagga
     6841 caaccgggag gatgccgccg tccgaatcgg acgtgcggtt tctgtaccgg tacgggcggg
     6901 caggaatgtc cgcttttttt gttcggacgc gtttgaatac ccgtttgatt ccgtccgttt
     6961 gcaaagggta tttttgttcg ggcggaaatt atagtggatt aacaaaaacc agtacagcgt
     7021 tgcctcgcct tagctcaaag agaacgattc tctaaggtgc tcaagcacca agtgaatcgg
     7081 ttccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgatttaa atttgatcca
     7141 ctataattcc gtcaaataag aaaggaattt tgtgcctgcg gtatcgcaaa acttcgcctt
     7201 aatgcgcccg attgcctagg gatgggcttc agacggcatt gttttccggt ttacgggcgg
     7261 tattcgggct tcataccgtt gggcagaagc tgccagacat atcccgtggt tttctgtttg
     7321 ccggcaagtt cgccggcttc gtcgccgtaa ccccaaaaat aatccacgcg caccgcgcct
     7381 ttaatcgcgc tgccggtatc ctgcgccata atcaggcggt tgagggcttt gcgggtaacc
     7441 ggatgggcgg tggcgacaaa taagggcgcg cccaaggtaa tgtagtgccg gtcgactgcg
     7501 ccggcgtact cgcccatcag cggcgtgccc agtgcgccga cagggccgtc attgctgctt
     7561 ccggtaagct ctcggaaaaa gatatagctg gggttttgcc ccaaaacttc ggcgaggcgt
     7621 tgcgggtttt gctgcatata ggctttgatg ccctgcatcg aggtctgccc gagcttgagg
     7681 tagcctttgt ccgccatata gcgtccgatg gaaacgtagg gatgttcgtt tttgtcggca
     7741 tagccgatgc ggatgtattt gccggacggg gttttcagac ggcccgagcc ttggatgtgc
     7801 ataaaaaaaa gttcgacggg gtcttcggcg taaccgagta tcggggcttt gccgtcaagc
     7861 gcgccgccgt tgatttggtt gcgcgtgtgg taggggagga agcggcttcc ttcaaacctg
     7921 cctttgattg ccgttgtgcg cgcggtgatg gggaatcggg agaggtcggc ggtgtgcgtg
     7981 ccgccggcat tgtcgattgt gccgctgttt ttccccgtct gcctgatgcg gacaagggct
     8041 tttccgctcc gcaaaccggc aggcaggggg acggagataa aatcgtcggg aataccgtaa
     8101 atcgggaagc gggcttgtgc cgtccgcctg tcgtcgccct tcagcaccgg ctcgtaatag
     8161 ccggtaaccg taccggcaag gcttccgttg cctgcaacct gccacggcgt gaaatagcgt
     8221 tcaaaaaact gttttgcctg aaaggaatgg acgggggttt gaaaggcttg ggcacacaca
     8281 tcctgccagc cttggcggtt tttcaaattg gcgcagccga ggcggaagga ttgcaggctt
     8341 ttggcgaaat cctgcgccgc ccagtggggc agggacaggt gcggcacaac ggtataaacg
     8401 gccccgccgc cggcaaccgt cgttccggcg ggggcgggga tgccgaccgg ccggtccggg
     8461 ccgttgatga cggatgtgtc gggttgcgga aaggtttgga tgctcttgct ttggcaggcg
     8521 gcgaggatgg cggcggcgat gccgcacagg gcggcgcgga acaggtattt tttcataatg
     8581 gacaatgttg tcagcagtaa taaaaaaaga tggtttcggg cggcgttgcg gcagccgtgg
     8641 agaggggatt ttaacacagg gcgcagctgc agcctgcgga actttccgcc gcgcggtact
     8701 gcagataaaa ataacttgca tttgtattta caagcaatga aaatattccg ataatatatt
     8761 attcatcatc cttgttcgtt cgcgtttatg ctggtcgctt ttttaattat gttgcgcgag
     8821 ggtatcgaag ccgcgctcat cgtcggcatc gttgccggtt ttctgaaaca gtccggacat
     8881 tccaaactga tgcctaaggt ctggttcggg gtcgtccttg cttctttgat gtgtttgggc
     8941 atcggatacg gcatccattc ggcaacgggc gagattcccc agaagcagca ggagttcgtc
     9001 gtcggcatta tcggtttggt tgctgtcgcg atgctgactt atatgatttt atggatgaaa
     9061 aaggcggcgc gttcgatgaa gcagcagctt caggattctg tacaggcggc tttgaaccgt
     9121 ggcagcggtc aaggatgggc cttggtcggt atggcgtttc ttgccgtggc gcgtgaaggt
     9181 ctggagagtg tttttttcct gcttgccgta ttcaaacaga gcccgacttg gcagatgccg
     9241 gccggcgcgg tagcgggggt tttggctgcc gccgtgattg gcgcgttgat ttatcagggt
     9301 gggatgcgcc tgaatctggc gaagtttttc cgttggacgg gggcgtttct gattgtcgtt
     9361 gccgccggcc tgcttgccgg ttcgctgcgc gcgctgcatg aggcaggtat ttggaacgcg
     9421 cttcaggaca ttgtgttcga ctcatcaaaa tatttgcacg aagacagccc gttgggcgtg
     9481 ctgctcggcg gatttttcgg ctataccgac catccgacgc agggcgaagc cttggtttgg
     9541 ctgctgtacc ttattcccgt catgacttgg tttttgtgcg gcagcaggcc gtctgaaact
     9601 ttaacccgta aagaggagct gaaatgagaa aattcaattt gaccgcattg tccgtgatgc
     9661 ttgccttagg tttgaccgcg tgccagccgc cggaggcgga gaaagctgcg ccggcagcgt
     9721 ccggtgaggc gcaaaccgcc aacgagggcg gttcggtcag tatcgccgtc aacgacaatg
     9781 cctgcgaacc gatggaactg accgtgccga gcggacaggt tgtgttcaat attaaaaaca
     9841 acagcggccg caagctcgaa tgggaaatcc tgaaaggcgt gatggtggtg gacgagcgcg
     9901 aaaacatcgc ccccggactt tccgataaaa tgaccgtcac cctgttgccg ggcgaatacg
     9961 aaatgacttg cggtcttttg accaatccgc gcggcaagct ggtggtaacc gacagcggct
    10021 ttaaagacac cgccaacgaa gcggatttgg aaaaactgtc ccaaccgctc gccgactata
    10081 aagcctacgt tcaaggcgag gttaaagagc tggtggcgaa aaccaaaacc tttaccgaag
    10141 ccgtcaaagc aggcgacatt gaaaaggcga aatccctgtt tgccgacacc cgcatccatt
    10201 acgaacgcat cgaaccgatt gccgagcttt tcagcgaact cgaccccgtc atcgatgcgc
    10261 gtgaagacga cttcaaagac ggcgcgaaag atgccggatt taccggcttc catcgtatcg
    10321 aatacgccct ttgggtggaa aaagacgtgt ccggcgtgaa ggaaattgca gcgaaactga
    10381 tgaccgatgt cgaagccctg caaaaagaaa tcgacgcatt ggcgtttcct ccgggcaagg
    10441 tggtcggcgg cgcgtccgaa ctgattgaag aagtggcggg cagtaaaatc agcggcgaag
    10501 aagaccggta cagccacacc gatttgagcg atttccaagc caatgtggac ggttcgaaaa
    10561 aaatcgtcga tttgttccgt ccgctgatcg aggccaaaaa caaagccttg ttggaaaaaa
    10621 ccgataccaa cttcaaacag gtcaacgaaa ttctggcgaa ataccggact aaagacggtt
    10681 ttgaaaccta cgacaagctg ggcgaagccg accgcaaagc gttacaggcc tctattaacg
    10741 cgcttgccga agaccttgcc caacttcgcg gcatactcgg cttgaaataa gccgcaagcg
    10801 ttcagacggt atttggcggc agataccgtc tgaagtttta tagtggatta acaaaaacca
    10861 gtacggcgtt gcctcgcctt gccttgccgt gctatttata ctgtctgcgg cttcgtcgcc
    10921 ttgtcctgat ttttgttaat ccactatatc cgccatatat tgcagggcgg gatttcaacc
    10981 tgccgctatc ggttaatgga aaaacggcgt gcagggatac ccatcctgct gcacggatat
    11041 tgaaggaaac accatgagca aaaaccaacc cgcacaaccg accaggcgca ctctttttaa
    11101 aaccgcgatc gcagccggag cagtcggcgc aatcggaggt tatctcggcg gcaaaaaaca
    11161 gggcgaaacc gccgaacgca ccgccgaaag ccaacactcg ccccaagcct atccctgcta
    11221 cggcgaacat caggcaggca tcgttacgcc gcagcaggcg ttttcgatta tgtgcgcctt
    11281 cgacgtaacc gcgcaaagtg ccaagcagct ggaaaacctg ttccgcacgc tgaccgcccg
    11341 catcgagttt ctcacccaag gcggcgaata ccaagacggc gacgacaaac ttccgccagc
    11401 cggcagcggc attttgggca aagccttcaa ccccgacggg ttgaccgtta ccgtaggggt
    11461 gggcagcagc ctgtttgacg gtcggttcgg actcaaagac aaaaaaccga ttcatttgca
    11521 ggaaatgcgc gacttctcca acgataagct gcaaaaaagc tggtgcgacg gcgatttgag
    11581 cctgcaaatc tgtgccttca cccccgaaac ctgccaagcc gccctgcgcg acatcatcaa
    11641 acacaccgtc caaaccgccg ttatccgttg gagtatcgac gggtggcagc ccaaatccga
    11701 acccggcgcg atggcggcgc gcaacctgtt gggcttcagg gacggcacgg gcaaccccaa
    11761 agtttccgac cccaaaactg ccgacgaggt tttgtggacg ggggtggccg ccaacagcct
    11821 cgacgaaccg gagtgggcga aaaacggcag ctatcaggca gtccgcctta tccgccactt
    11881 tgtcgagttt tgggacagga cgccgcttca agagcaaacc gacattttcg ggcggcgcaa
    11941 atacagcggt gcgccgatgg acggcaaaaa agaagccgac caaccggatt ttgccaaaga
    12001 ccccgagggt gatatcacgc ccaaagacag ccatatacgc ctggcgaatc cgcgcgatcc
    12061 cgaattcctc aaaaaacacc gcctcttccg ccgcgcctac agctattcgc gcggactcgc
    12121 ctcaagcgga cagcttgatg tcgggctggt gttcgtctgc tatcaggcaa accttgccga
    12181 cggattcatc ttcgtgcaaa acctcctcaa cggcgaaccg ctggaagaat acatcagccc
    12241 cttcggcggc ggctatttct tcgtcttgcc cggcgtggaa aaaggcggct ttttggggca
    12301 agggctgctg ggcgtataaa tccgccatat aaaaaacgcc gtctgaatcc gataaggggt
    12361 tcagacggca ttttactgtt tgggcggtca ggcttttttg acgaattcag attttaaatt
    12421 catcgcgctg ccgtcgattt tgcaggcgat gttgtgatcg ccttcctgca ggcgtatgcc
    12481 tttgactttc gtaccttgtt tgatcgtcat cgagctgcct tttaccttga ggtctttgat
    12541 gaggatgatg gtgtcgccgt tttgcagcac cgcgccgttg gcatcgcgca cttcttcggc
    12601 ggcttcggct gcggcggatt cggttttatt ccattcgtgg gcgcattcgg ggcagatgta
    12661 ttgtccgccg tcttcgtagg tgtattcgga ggcgcattgc gggcaagggg gtaatgacat
    12721 ggtttgccgt ccttatcgga tgtttgtttt ggggtgccgt ctgaaacctg aaaccggctt
    12781 cagacggcat agctttattg tttgtctttt tcaggacgca cccagccttc gatgacggtt
    12841 tggcgggcgc gggcgagggc gagtttgttg tcttcgacat tgcgggtaat cgtgctgccc
    12901 gcgcctgtgg ttactttgtt gccgagggta acgggggcga ctaggacgca gtttgaaccg
    12961 atgcgcactt cgtcgccgat gacggttttg tgtttgtgca cgccgtcgta gttggcaata
    13021 atcgtaccgg cgccgaagtt ggttttgctg ccgacttcgg catcgccgat gtaggtaagg
    13081 tggttggctt tggtgccttt gccgatggcg gcgtttttga tttcgacgaa gttgccgacg
    13141 tgtacgtcgt ctgcaaggcg ggcttgcgga cgcaggcggg cgtacgggcc gattcggttg
    13201 ttttcgccga cttcgcagtc ttcgaggtgg gagaaggggg cgattttgct gtttgcaccg
    13261 attttggcgt ttttgatgac gcagtttgcg ccgatttcga cgttgtcgcc gatttcgact
    13321 tcgccttcaa agatacagtt cacatcaatt acgacatcct gtccgtgttt cagacggcct
    13381 cgtaaatcga aacgtgccgg gtcgtgcagg gtaacgcctg ctttgagcaa ttcttgcgcc
    13441 tgtccggttt ggaagatgcg ttcgagttcg gcgagctggc gtttgttgtt cacgccggcg
    13501 gcgaggtggg aggcgcggac ttggacggga tgaactttaa taccgtcggc aacggctttg
    13561 gcgatgaggt cggtcaggta gtattcgcct tgggcattgt tgctggaaag gctgttcagc
    13621 cagttttcca gtttggcgtt gggcaggacg aggatgccgg tgttggtttc tttcacggct
    13681 ttttgggcgg tatcggcgtc tttttcttcg acaatggcgg ttacgctgcc gctgccgtcg
    13741 cggatgatgc gccccaaacc tgacgggtcg gcgggcacgt cggtcaacag cccgacttcg
    13801 ttgcctgcgg cttcgagcag ggtttcgagg gtttcaacgt caattaaagg aacgtcgccg
    13861 tacaacacca gcgtgcggcc ttcggcggca aggtggggca gggcggtttt gacggcgtgg
    13921 ccggtgccga gctgttcggt ttgttcaacc cagacgacat cgcgtttgac ggtgtctaaa
    13981 acttgctctt tgccgtggcc gacgacgacg cagatgtttt gcggattcag cgcggcggcg
    14041 gtgtcgataa cgcgcccgag cattgtttcg ccgccgattt cgtgcaaaac cttgggcatt
    14101 ttggaataca tgcgcgtgcc tttgccggcg gcgaggatga cgatgtttaa agtgttttgc
    14161 ggcatagcgt tttcctgtgc aatgccgtct gaaagggctt cagacggcat agggtgggtt
    14221 tatcggtttt gaaatttggg cttttgccag tgttggcgat gctcttcgtc ggcgttgttg
    14281 ccggtttggt tgggtaacac ggcatggcgt tcgggacggt attggttgta gttcatattt
    14341 ttcgagtagc tgccgtcttg gtaataaatg ggcgtgccgg cgggatattt ttgacggacg
    14401 gcggtcttgc cgttgccgtc ttgataagtt tcccacgcgc agcccgacaa aagggcggcg
    14461 gcagtcatca ggataaggaa ggttttacgc ataacattct ttcgtatttt cggggggttg
    14521 tgcgggtatt gtaatgattt tggcggtgtt ctgacaaagt ttctgcatac cgagccagtt
    14581 gcgccatatc gcttacggaa gcatcgataa agggcaggtc gtgcactttt gcaccgaacc
    14641 ggacggtttt catgcccaat gcttttgcct gatgcaggtt gtccgcgctg tcgtccacca
    14701 taatgcagca ttcgggcggt acgtccaaca ggcggcagac attgagatac gcttgcggat
    14761 tgggtttgta cagcagcccg aaatcatccg tgccgaaaag cgcgtcgaaa cggttttcca
    14821 aaccgagtgc gccgacaacg gcacggacgt aaaacgacgg gccgttggaa aaaaccgcct
    14881 tgcgcccttt taggcggctc agggtgtttt gtgtttccgg cataccgtgc agacgggtca
    14941 aaacctcgtc aatcggatgg ctttcgcgca aaaattcggc gatgtcgatt tcgggatggt
    15001 ggatttgcag tccggcgagc gttgcgccgt agcggtgcca atagtcttga cgcaggtcgg
    15061 acgcggcgga ttcggagagt ttgaggcggc gtgtcatata gcgtgtcata gcgcggttga
    15121 tgagtgtgaa gaggccggca tcggcattgt gcagcgtgtt gtcgaggtcg aacagccaca
    15181 cggtcgggtt ttcttgcatt ttgaaccgtg aaaatttgtt agaatgttat tttacagcga
    15241 atagaggagg actcggaatg aaacggaaaa tttggctgct gccgctgctg gcggtttcgg
    15301 catacctgca ggcgcagacg gaagtcaggc tggcggtgca taagtcgttc agcctgccca
    15361 aagggctgat tgcgcgcttc gagcgggcaa acgatgcgaa ggtgtcgatt attcaggcgg
    15421 gcggcgcgaa cgaaatgctc aacaaactga ttttgagccg cgccaacccg attgccgacg
    15481 cggtgtacgg tttggacaac gccaatatcg gcaaggcgcg ggaaatgggc attttggcgg
    15541 cggcgcaacc cgaatccgcc cccgtcgcgg tcgggctgcc ttcggctttg gcggtcgatt
    15601 acggctatgt gtccatcaat tacgacaaaa aatggtttga aggcaaaaag ctgcccctgc
    15661 cgcaaaccct gcaggatttg acccgccccg aatataaaaa cctattggtc gtgccgtccc
    15721 ccgccacgtc gtccccgggg ctgggcttcc tgatggcgaa catcagcggt ctgggcgaag
    15781 aaggcgcgtt caaatggtgg gcacagatgc ggcagaacgg cgtgaaggtc gccaaaggct
    15841 ggagcgaggc gtattacacc gacttttcgc acaacggcgg cgcgtatccg ctggtggtcg
    15901 gttatgccgc cagcccggcg gcggaagtgt atttttccaa aggcaaatac agcgagccgc
    15961 cgacgggcaa cctgttttta aaaggcggcg tattccgcca ggtcgaaggc gcggcggtct
    16021 tgaagggcgc gaaacagccg gaattggcgg caaaactggt gcaatggctg caaagtcggg
    16081 aagtgcagca ggcggttccg tccgaaatgt gggtttaccc cgccgtcaaa aacacgcgcc
    16141 tgcccgacgt gttccgcttc gcccaagccc cgacgcacac caccgccccc gcgcagcgcg
    16201 atattgatgc gaaccagcgc ggatgggttt cccgttggat tagaacggtt ttgaaataaa
    16261 acaaacatac cgccccgcag ggcttcatac ggcattttta cacctgtgcc gattacgccg
    16321 cacggggcgg atgttcgatc aagaggaaaa caatggactt caaacaattt gattttttac
    16381 acctgatcag tgtttccggt tgggagcatc tggctgaaaa ggcgtgggcg ttcgggctga
    16441 accttgccgc cgcgctgctt atttttttgg tcggaaaatg ggcggcgaaa cgcattgtcg
    16501 ctgtgatgag ggcggcgatg acgcgcgcgc aggtcgatgc cacgctgatt agttttttgt
    16561 gtaatgttgc caatatcggc ttattgattt tggtgattat tgccgcattg ggcagattgg
    16621 gcgtttccac aacatccgta accgccttaa tcggcggcgc gggtttggcg gtggcgttgt
    16681 ccttgaaaga ccagctgtcc aattttgccg ccggcgcgct gattatcctg ttccgcccgt
    16741 tcaaagtcgg cgattttatc cgcgtcggcg gttttgaagg atatgtccga gagattaaaa
    16801 tggtgcagac ttctttgcgg acgaccgaca acgaagaagt cgtgctgccc aacagcgtgg
    16861 tgatgggcaa cagcatcgtc aaccgttcca cactgccgct gtgccgcgcc caagtgatag
    16921 tcggcgtcga ttacaactgc gatttgaaag tggcgaaaga ggcggtgttg aaagccgccg
    16981 tcgaacaccc cttgagcgtt caaaacgaag agcggcaggc cgccgcctac atcaccgcct
    17041 tgggcgacaa tgccatcgaa atcacattat gggcttgggc aaacgaagca gaccgctgga
    17101 cgctgcaatg cgacttgaac gaacaagtgg tcgaaaacct ccgcaaagtc aatatcaaca
    17161 tcccgttccc gcaacgcgac atacacatca tcaattctta aacgccgtct gaaagaggag
    17221 tgggaaatgg acgcgctgca caccatcgcc cgaaacctga cgaaaaaacg tcaaaccgta
    17281 agctgtgccg aatcctgcac gggtgggctg cttgccgccg tattcacaag cgttgcaggc
    17341 agttcgcaat ggttcgatca aagttttgta acatacagca acaaagccaa agaagaccgc
    17401 ttgggcgtgt tgcccgaaac cctgctcgaa cacggcgcgg tcagccgcca aaccgtctat
    17461 gagatggcgc gcggcgcgaa agccgtggcg caggcggatt acgccgtcgg tatttccggc
    17521 atcgccggtc cgggcggcgg cagcgaaagc aaacccgtcg gcacggtttg gttcgggttt
    17581 gcctttccgg gcggaagttg cgaagcaatg cgccgttttg acggcaaccg cgaatccgtc
    17641 cgcgcgcagg cggtcgcctt cgcgttggaa cggttggcgg ggctgattga aaacggcggc
    17701 gatgccgtct aaacaaaatc tccgtctgga caaaatcccc gccggataaa aaataccgtc
    17761 tgaaacgttg caggtttcag acggtatttt gtcgggttag gcggcggtgc ggcttatttc
    17821 actttactct tcaacgcgcc gtagcctgcc gcgtccattt gttccagcgg gatgaatttc
    17881 aagctcgcgc cgttgatgca gtagcgcagt ccgcctttgt cgcgcgggcc gtcggggaag
    17941 acgtgtccca aatgcgaatc ggcggcgtgg ctgcgcactt cggtgcggcg catgttgtag
    18001 ctgaaatcat cgtgttcggt aacggatttt gcatcaatcg ggcgcgtgaa gctcggccag
    18061 ccgcagccgg aatcatattt gtcggcggag ctgaacaaag gttcgccgct gacaacgtcc
    18121 acataaatgc cgggtttgaa caaatggtcg tattcgtggc tgaaggcata ttcggtcgcg
    18181 ctgttttggg taacttggta ttgctcttcg gtcagggtgc gtttgagttc ggcgtcactc
    18241 ggttttttat acgttgccgc gtcgaagcct ttgccttgcg gtgcggtctt ggttttgccc
    18301 ggcagcggtt cgtcggcttt gcggatatcg atgtggcagt agccgttggg gtttttaatc
    18361 aagtagtcct gatggtattc ctcggcatcg tagaagtttt tcagcggctc gttttcaaca
    18421 acgaggggca gttggtattt ttgctgctcg cgtttgaggg cggcggcgat gacggctttt
    18481 tcggcggggt cggtgtagta cacgccgctg cggtattgcg taccggtgtc gttgccctgt
    18541 ttgttgaggc tggtcggatc aacgacgcgg aagaaatatt gcaggatgtc gtctaggctg
    18601 agtttgtcgg catcgtaggt cactttaacg gtttcggcgt ggcccgtatg gcggtaggac
    18661 acgtcttcat agctcggatt tttcgtgttg ccgttggcgt agccggatac cgcgtcaacc
    18721 acgccgtcga tgcgttggaa ataggcttcc aagccccaga agcagccgcc ggcgaggtaa
    18781 atggtgcgcg tgttcatgat ttttgaatcc tttttctgag tgtcgggttt gtagaacgaa
    18841 tgtttcaaac tgcccaaatc ggcattcggg tcgcggatta acgccaacgc ctgcgcttcg
    18901 ttgatgctgc ctttgacgat gcgctgcacg tcgccgtctt taccgattaa cgcccacgaa
    18961 gggtaaacgc tgatattcag gctttgggcg atcgtgccgc cgttgtcggt tacgacgggc
    19021 agcttgggat aattcaaacc ggcataccat ttttggaagt cgccgtcttt tttctcgtgc
    19081 aaaaagcccg gagacgcgac ggtaatcagg ttggcggagc tgaattttgc atcttgcgcc
    19141 catttttcgg tctgtcccaa ttcggacaga cacaaaggac accagcttgc ccaaaattta
    19201 atcagcgtcg gtttgtcttt tttcaagtaa acactggcgg ggcggttgtc tgcggttttc
    19261 aaagtggata aagtgtgcgg cacggtcgcg gctccggcat cgacgatttt gggcgaacaa
    19321 gcacccagcg caagcaggca gccgaacttg gcgcaaaggg aaaagaaagt acggtgtttc
    19381 attttaatgt ttcctgtgtg gacggtttgc atgattagac gtttgagatg ccgaaacctt
    19441 acagcccgga ttttcagaca accttgccgc gcaaaatacg ctacaataca ccctatttca
    19501 agtttctaaa attaaaagga aaattcaatg ttcagcttct tccgtcgcaa gaaaaaacag
    19561 gaaacgccgg ctcccgagga ggctcaagtt caggaaactg cagcaaaagc agaatccgaa
    19621 gttactcaaa tagttgaaaa tattaaagaa gaagtcgaat ctttaacgga aagcgtcaaa
    19681 gggcaggtcg aatcggctgt tgaaaccgtc agcggtgcgg ttgaacaggt aaaggaaacc
    19741 gttgccgaga tgctgtctga agcagaggaa gcggcggaaa aagcagcgga acaagtcgaa
    19801 gcggcaaaag aagccgttgc cgaaaccgtc ggcgaggctg tcgggcaagt tcaagaagcc
    19861 gttgcgacaa ctgaagaaca caagctcggt tgggcggcgc gtttgaaaca aggtttgacc
    19921 aaatcgcgcg acaaaatggc gaaatcgctg gcgggcgtgt tcggcggcgg acaaatcgac
    19981 gaagatttgt acgaagagct ggaaaccgtg ctgattacca gcgatatggg catggaagcc
    20041 accgaatacc tgatgaaaga cgtgcgcgac cgcgtcagcc tcaaagggct gaaagacggc
    20101 aacgaattgc gcggcgcgct gaaagaagcc ttgtacgacc tgattaagcc tctagagaaa
    20161 ccgctggttt tgcccgaaac caaagagccg tttgtcatca tgcttgctgg catcaacggc
    20221 gcgggcaaaa ccacatccat cggcaaactc gccaaatatt tccaagcgca gggcaaatct
    20281 gtgctgcttg ccgccggcga tactttccgc gccgccgcgc gtgagcagct tcaagcttgg
    20341 ggcgaacgca acaacgtaac cgtgatttcg caaaccacgg gcgattccgc cgccgtgtgc
    20401 ttcgatgccg tccaagccgc caaagcgcgc ggcatcgaca ttgtgctggc cgacaccgcc
    20461 ggccgcctgc ccacgcagct tcacttgatg gaagaaatca aaaaagtgaa acgcgtgctg
    20521 caaaaagcca tgcccgacgc gccacacgaa atcatcgtcg tgcttgatgc caatatcggt
    20581 caaaacgccg tcaaccaagt caaagccttt gacgacgcat tggggctgac cggtttaatt
    20641 gttaccaagc tagacggcac ggcaaaaggc ggcatcctcg ccgcgcttgc ctccgaccgc
    20701 cccgtccccg tccgctatat cggcgtgggc gaaggcatag acgatttgcg cccgtttgac
    20761 gcgcgcgcgt ttgtggacgc actgctggat tgagccgaaa tgccgtccga aaacagcaga
    20821 ccgatgccgt cattcccgcg caggcgggaa tccagacctt gggataacgg caatattcaa
    20881 agtttataaa agacccgtca ttcccgcgca ggcgggaatc cagaccttag aacaacagca
    20941 atattcaaag gttagctgaa gctttagaga ttctggattc ccactttcgt gggaatgacg
    21001 ggatgtaggt tcgtgggaat gacgcggtgc aggtttccgt gcggatggat tcgtcattcc
    21061 cgcgcaggcg ggaatccaga ccttgggata acggcaatat tcaaaggtta taaaagaccc
    21121 gtcattcccg cgcaggcggg aatctagacc ttagaacaac agtaatattc aaaggttagc
    21181 tgaagcttta gagattc
//
LOCUS       DBBZYD010000025        20870 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.025, whole genome shotgun sequence.
ACCESSION   DBBZYD010000025 DBBZYD010000000
VERSION     DBBZYD010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20870
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.025"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            112..270
                     /locus_tag="ACJJDL_000780"
     CDS             112..270
                     /locus_tag="ACJJDL_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573533.1"
                     /translation="MPSEHAFGRRFYNKNTSWRLVLCLSKFLCRAYLRISDGIGLCCL
                     KSVFRFSL"
     gene            352..1473
                     /gene="dnaJ"
                     /locus_tag="ACJJDL_000781"
     CDS             352..1473
                     /gene="dnaJ"
                     /locus_tag="ACJJDL_000781"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HGG7573534.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1669..3687
                     /locus_tag="ACJJDL_000782"
     CDS             1669..3687
                     /locus_tag="ACJJDL_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HGG7573535.1"
                     /translation="MNKSLSSSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDTAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGK"
     gene            complement(3730..4287)
                     /gene="rfbC"
                     /locus_tag="ACJJDL_000783"
     CDS             complement(3730..4287)
                     /gene="rfbC"
                     /locus_tag="ACJJDL_000783"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HGG7573536.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLPLSR"
     gene            complement(4341..5207)
                     /gene="rfbA"
                     /locus_tag="ACJJDL_000784"
     CDS             complement(4341..5207)
                     /gene="rfbA"
                     /locus_tag="ACJJDL_000784"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HGG7573537.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNRMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLSDEKLEELARPMAKN
                     QYGQYLLRLLKK"
     gene            complement(5270..6352)
                     /gene="rfbB"
                     /locus_tag="ACJJDL_000785"
     CDS             complement(5270..6352)
                     /gene="rfbB"
                     /locus_tag="ACJJDL_000785"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HGG7573538.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEF
                     IQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYA
                     PSSPYSASKVSSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE
                     ELAPEKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQ
                     WYLDNKTWWQNVLNGSYRLERLGTGK"
     gene            complement(6353..6973)
                     /gene="galE"
                     /locus_tag="ACJJDL_000786"
                     /pseudo
     CDS             complement(6353..6973)
                     /gene="galE"
                     /locus_tag="ACJJDL_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(7052..7396)
                     /locus_tag="ACJJDL_000787"
     CDS             complement(7052..7396)
                     /locus_tag="ACJJDL_000787"
                     /inference="COORDINATES: protein motif:HMM:NF014177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HGG7573539.1"
                     /translation="MNKQYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDGAMIFSGSPHAGFMSQRYAEK
                     FYFHDEYQQLDL"
     gene            complement(7389..8387)
                     /locus_tag="ACJJDL_000788"
     CDS             complement(7389..8387)
                     /locus_tag="ACJJDL_000788"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7573540.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(8418..10691)
                     /locus_tag="ACJJDL_000789"
     CDS             complement(8418..10691)
                     /locus_tag="ACJJDL_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HGG7573541.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDGLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETESEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(10756..11406)
                     /locus_tag="ACJJDL_000790"
     CDS             complement(10756..11406)
                     /locus_tag="ACJJDL_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7573542.1"
                     /translation="MISVEHVSKQYQMRGGMRTVLDDINFSLQKGEKVGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(11403..12200)
                     /locus_tag="ACJJDL_000791"
     CDS             complement(11403..12200)
                     /locus_tag="ACJJDL_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7573543.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(12200..13363)
                     /gene="ctrB"
                     /locus_tag="ACJJDL_000792"
     CDS             complement(12200..13363)
                     /gene="ctrB"
                     /locus_tag="ACJJDL_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HGG7573544.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(13378..14553)
                     /gene="ctrA"
                     /locus_tag="ACJJDL_000793"
     CDS             complement(13378..14553)
                     /gene="ctrA"
                     /locus_tag="ACJJDL_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HGG7573545.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            14688..15821
                     /gene="neuC"
                     /locus_tag="ACJJDL_000794"
     CDS             14688..15821
                     /gene="neuC"
                     /locus_tag="ACJJDL_000794"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0006047 - UDP-N-acetylglucosamine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase"
                     /protein_id="HGG7573546.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTCKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALEVSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            15825..16511
                     /gene="neuA"
                     /locus_tag="ACJJDL_000795"
     CDS             15825..16511
                     /gene="neuA"
                     /locus_tag="ACJJDL_000795"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HGG7573547.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            16512..17561
                     /gene="siaC"
                     /locus_tag="ACJJDL_000796"
     CDS             16512..17561
                     /gene="siaC"
                     /locus_tag="ACJJDL_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HGG7573548.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIS"
     gene            17713..20826
                     /locus_tag="ACJJDL_000797"
     CDS             17713..20826
                     /locus_tag="ACJJDL_000797"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7573549.1"
                     /translation="MAVIIFVNGIRAVNGLVKSSINTANAFAEEGLDVHLINFVGNIT
                     GAEHLSPPFHLHPNVKTSSIIDLFNDIPENVSCRNIPFYSIHQQFFKAEYSAHYKHVL
                     MKIESLLSEEDSIIFTHPLQLEMYRLANNNIKSKAKLIVQIHGNYMEEIHNYEILARN
                     IDYVDYLQTVSDEMLEEMHSHFKIKKDKLVFIPNITYPISLEKKEADFFIKDNEDIDN
                     AQKFKRISIVGSIQPRKNQLDAIKIINKIKNENYILQIYGKSINKDYFELIKKYIKDN
                     KLQNRILFKGESSEQEIYENTDILIMTSQSEGFGYIFLEGMVYDIPILAYNFKYGAND
                     FSNYNENASVFKTGDISGMAKKIIELLNNPEKYKELVQYNHNRFLKEYAKDVVMAKYF
                     TILPRSFNNVSLSSAFSRKELDEFQNITFSIEDSNDLAHIWNFELTNPAQNMNFFALV
                     GKRKFPMDAHIQGTQCTIKIAHKKTGNLLSLLLKKRNQLNLSRGYTLIAEDNSYEKYI
                     GAISNKGNFEIIANKKNSLVTINKSTLELHEIPHELHQNKLLIALPNMQTPLKITDDN
                     LIPIQASIKLEKIGNTYYPCFLPSGIFNNICLDYGEESKIINFSKYSYKYIYDSIRHI
                     EQHTDISDIIVCNVYSWELIRASVIESLMEFTGKWEKHFQTSPKIDYRFDHEGKRSMD
                     DVFSEETFIMEFPRKNGIDKKTAAFQNIPNSIVMEYPQTNGYSMRSHSLKSNVVAAKH
                     FLEKLNKIKVDIKFKKHDLANIKKMNRIIYEHLGININIEAFLKPRLEKFKREEKYFH
                     DFFKRNNFKEVIFPSTYWNPGIICAAHKQGIKVSDIQYAAITPYHPAYFKSPKSHYVA
                     DKLFLWSEYWNHELLPNPTREIGSGAAYWYALDDVRFSEKLNYDYIFLSQSRISSRLL
                     SFAIEFALKNPQLQLLFSKHPDENIDLKNRIIPDNLIISTESSIQGINESRVAVGVYS
                     TSLFEALACGKQTFVVKYPGYEIMSNEIDSGLFFAVETPEEMLEKTSPNWVAVADIEN
                     QFFGQEK"
BASE COUNT         5648 a         4767 c         4774 g         5681 t
ORIGIN      
        1 gggaacctgt aaaggaaggg gcatcggctg ccgccggtgc ttttttgttt ggaagggaaa
       61 tggctggaaa aagacctgcg ctatatcggg gaatgaatcg acgcaaagga aatgccgtct
      121 gaacatgcgt tcgggcggcg tttttataac aaaaacactt catggcggtt ggttttatgc
      181 ctgtctaagt ttttgtgtcg tgcatacctg aggatttcag acggcatcgg tttatgctgt
      241 ctgaaaagtg tattccgttt cagtttgtaa gctatggcag tctgtttgtc ttgtgttttg
      301 cgtaattgcc cttattttga gccgtgattt tattttgaat tagatgaaaa aatgagtaat
      361 caagattttt atgcgacgct gggtgtggca agaacagcta ccgatgatga gattaaaaaa
      421 gcctaccgga aattggcgat gaaataccat cccgaccgca atcctgacaa taaagaggcg
      481 gaagagaagt ttaaagaagt acaaaaggcg tatgaaactt tgtccgacaa ggaaaagcgc
      541 gctatgtacg accagtatgg tcatgcggcg tttgaaggcg gcggacaggg gggcttcgga
      601 gggtttggcg gatttggcgg tgcgcagggt tttgactttg gggatatttt cagccaaatg
      661 tttggaggcg gttcggggcg cgcccagcct gattatcagg gtgaggacgt tcaagtcggt
      721 atcgaaatca cgcttgaaga agccgcaaaa ggtgtgaaga aacgcatcaa tattccgact
      781 tatgaagcgt gtgatgtctg taacggcagt ggcgcgaaac cggggacatc cccggaaacc
      841 tgcccgactt gcaaaggttc gggtacggtg cacatccagc aggcgatttt ccgtatgcag
      901 cagacttgtc cgacctgcca cggtgcgggc aaacacatta aagaaccttg cgtcaaatgc
      961 cgtggcgcgg ggcggaataa ggcggtcaag acggtggaag tcaatattcc cgccggtatc
     1021 gatgacgggc agcgtatccg tttgagcggc gaaggcgggc cgggtatgca cggtgcgcct
     1081 gccggcgact tgtatgtaac cgtccgcatt cgggcgcata agattttcca acgcgacggt
     1141 ctggacttgc attgcgaact gccgatcagt tttgccacgg ctgctttggg cggggagttg
     1201 gaagtgccga ccttggacgg aaaggtcaag ctcaccgtcc ccaaagaaac ccaaaccggc
     1261 aggaggatgc gtgtgaaagg taagggtgtc aaatcgttgc gcagcagcgc gaccggcgat
     1321 ttgtactgcc atattgttgt cgaaacgcct gtcaatttga ctgaccgtca aaaagagctt
     1381 ttggaagagt ttgagcggat ttctaccggc ttggaaaacc aaacaccgcg caagaaatcg
     1441 tttttagaca agctgcgcga tttgtttgat tgattttaag gttcggaaac aagcagccgt
     1501 atcggggaat ctccttgata cggctgtttt tatttgttta aaaatagttt ttattttcaa
     1561 tggggtatga ggcagggtgg gataactgtt tttaactgtt ctttttaaaa cttgacatca
     1621 tggcgtgatg ccaacaatat gtgaacgtct gttgtcaaag gaagaataat gaataaatct
     1681 ttatccagtt cggtagaaga ataccgcgag ctgacgctcc gaggcatgat actcggtgca
     1741 ttgatcactg taatttttac tgcgtccaat gtttacctcg gtttgaaagt cgggctgacc
     1801 tttgcctcgt cgattccggc ggcggtgatt tcgatggcgg ttttaaagtt tttcaaaggc
     1861 agcaatattt tggaaaacaa catggtgcag acccaagctt cggcggcggg tacgctttcg
     1921 accatcatct tcgtcctgcc cggtttgctg atggcgggct actggagcgg tttcccgttc
     1981 tggcagacga cgcttttatg tattgccggc gggattttgg gggtgatttt caccattccg
     2041 ctgcgttacg cgatggtggt gaaaagcgat ttgccttatc cggaaggtgt ggcggctgct
     2101 gaaattttga aagtgggcgg tcatgaagaa ggggataacc gtcagggcgg cagcggcatc
     2161 aaagagctgg cggccggcgg tgcgttggcg ggattgatga gcttttgcgc cggaggtctg
     2221 cgcgtgattg ccgacagcgc gagttattgg tttaaaagcg gtacggcgat tttccagctg
     2281 ccgatgggct tttcactggc attgttgggc gcgggctatt tggtcggact gacgggcggt
     2341 atcgccatcc tgttgggcat ttcgattgct tggggcattg ccgtgccgta tttctcctca
     2401 cacattccgc aaccttccga tatggaaatg gcggcgtttg cgatgaagct gtggaaggag
     2461 aaagtgcgtt ttatcggtgc ggggactatt ggcattgcgg cggtttggac gctgttgatg
     2521 ctgctcaagc cgatggtgga aggcatgaag atgtcgttca agagttttgg cggcggtgcg
     2581 cccgctgcgg aacgcgccga acaagatttg tcgcctaaag ccatgatttt ttgggtgctg
     2641 gcgatgatgt ttgttttagg cgtgtcgttt taccacttta tcggcgattc gcacattacg
     2701 ggcggcatgg cttggctttt ggtggtcgtt tgcacgcttt tggcttccgt catcggcttt
     2761 ttggtcgccg ccgcctgcgg ttatatggca ggtttggtcg gctcgtcttc cagcccgatt
     2821 tccggcgtgg gcatcgtgtc cgtcgtcgtt atttcactgg ttttgctgct ggtaggcgaa
     2881 tccggaggtt tgttggcgga tgaggctaac cgcaaatttt tgctggcact gactttgttt
     2941 tgcggctcgg cagtaatctg cgtggcttcg atttccaatg acaacctgca agacttgaaa
     3001 accggctacc tgctcaaagc cacgccttgg cggcagcaag tcgccctgat tatcggctgt
     3061 atcgttggtg cgctggttat ttcgcccgtg ttggaactgc tttacgaagc ctacggcttt
     3121 accggcgcaa tgccgcgcga aggcatggat acggcgcagg ctttggcagc tcctcaagcg
     3181 actttgatga cgaccatcgc gtcgggcatt ttcgcccaca acctcgaatg ggtctacatc
     3241 tttaccggca tcgcgatcgg cgcggtatta atcgtcgtcg atttggtgtt gaaaaaatca
     3301 tcaggcggca aacttgccct gcccgtcctt gcggtcggta tgggtattta tctgccgccg
     3361 tccgtcaata tgcccatcgt ggcaggcgcg gtgttggcgg cggtgttgaa acacatcatc
     3421 ggtaaaaaag cggaaaaccg cgaaggccgt ctgaaaaacg ccgagcgtat cggaaccttg
     3481 ttctccgccg gcctgattgt cggtgaaagc ctgatcggtg tgattatggc gtttattatt
     3541 gccttctccg tgaccaacgg cggctcggat gcgccgcttg cgttgaatct gcaaaactgg
     3601 gatgccgccg cttcttggtt gggtttggcg ttcttcgtta ccgggatgtt tttctttgca
     3661 cagcgcgtac tgaaggcggg caagtaggct gtcggaaaaa atgccgtctg aagcgttcag
     3721 acggcatttt tatctggaaa gcggaaggcg gagcttttcg gcttgcgccc acgttttgcc
     3781 ggcaaggtct ttgggcgaca gcagcggcgc ggtttgaagc ggccagccta tgccgactgt
     3841 cgggtcgttc catattaaaa cctgttcggc ttcaggcttg taatagtcgg tgcatttgta
     3901 cacgacttcc gccgcgtcgc ccaaaacgca aaacccgtgc gcgaagcctt cgggtatcca
     3961 aagctggcat tggttttgcg cggacagggt tgcgcccgcc catttgccga aagtcggcga
     4021 accttcgcgc atatcgacgg ccacgtcgaa cacttcgccg acaactacgc gtacgagttt
     4081 gccttgtgtg ttttcggttt ggtagtgcag gccgcgcaat acgcctttgc cggatttgga
     4141 gtggttttcc tgcacgaagg tgcgttcgca gacttgggtt ttaaaccact cgtcgcggaa
     4201 ggtttccata aaaaagccgc gcgcgtcgcc gaagacttgg ggctcaagca gttttacgtc
     4261 aggaatggcg gtatcaatga tgttcatctt tttatctttc atctaaaggc cgtctgaaaa
     4321 gtttcagacg gcctcaaaca ttattttttc aacaggcgca gcaaatattg gccgtattgg
     4381 tttttcgcca tcgggcgcgc caattcttcc agtttttcat cggaaagcca accgttgcgc
     4441 caagcgattt cttccaggca ggcgatgtgc aggttttgga tgttttgcac ggtttggacg
     4501 aacgaagccg cctcgtgcag gctttcgtgc gtaccggtgt ccagccacgc gaaaccgcgt
     4561 cccaatattt gaacggagag cgagccgtct tccaaataca tccggttgag gtcggaaatt
     4621 tccaattcgc cgcgtgcgga cggtttgagc tgtttggcga actcgacggc acggttgtcg
     4681 tagaagtaca agccggttac cgcccaatcg gatttgggcc gttgcggttt ttcttcgatg
     4741 gaaacggcgc ggaagttttc gttaaattca accacgccga aacgttcggg gtttttgacc
     4801 tgataagcaa acacggttgc gccgtgcgtt tgcgctgccg cctgtttcaa tgtttgcgta
     4861 aacgactgac cgtaaaaaat attgtcgccc aaaaccaagc aaacattgtc gttgccgata
     4921 aattcttcgc cgatgataaa tgcctgtgcc aagccgtccg gactgggttg cacggcataa
     4981 ctgatggaaa tgccgaaatc gctgccgtcg ccaagcaggc gtttgaaaga ggcgttgtct
     5041 tcaggcgcgg taatcaccaa aatatcgcgg attcccgcca gcatcaaaac cgacaagggg
     5101 taataaatca tcggtttgtc gtacacgggc aggagctgtt tggatacgcc gcgcgtgatg
     5161 gggtagaggc gcgtgccgct gccgcctgcc agtatgatgc ctttcatctt tgttttcttc
     5221 ctttgcgatg ggttttcaga cggcattgcg tcgggatgcc gtctgaaaac tattttccag
     5281 tacctaaacg ttccaaacga tagctgccgt tcaatacatt ttgccaccag gttttgttgt
     5341 ccagatacca ttgcacggtt ttgcggaggc cggactcgaa ggtttccaaa ggcagccagc
     5401 ccaaatcccg cctgattttg gctgcgtcga cggcgtagcg tacgtcatgg ccggggcggt
     5461 cttgtacgaa agtaatcaaa tcttcataac gcgccacacc ggccggtttt tcgggagcga
     5521 gttcttccag cagggcgcag atggttttga cgacttcaat attggctttt tcattgtggc
     5581 cgccgatatt gtaggtttcg ccgacaacac cttcggtaac aacctgatac agtgcgcgcg
     5641 cgtggtcttc gacaaacagc cagtcgcgga tttgcatacc gtcgccgtac acaggcagcg
     5701 gtttgccgtc aagcgcgttc agaatcatca aaggaatgag tttttccgga aaatggtaag
     5761 gaccgtagtt gttggagcag ttggttacaa tggtcggcaa gccgtaagta cgcaaccacg
     5821 cgcggacgag gtggtcgctg gacactttag aggcagagta ggggctggac ggcgcgtagg
     5881 gcgcggtttc ggtaaacaaa tcgtccgtgc cgcctaaatc gccatagact tcatcggtgg
     5941 aaatatggtg gaaacggaag gcttcgtgct gttcagacgg catttgttgc cagtaggcgc
     6001 gggctgcttc aagcagattg aatgtgccga cgatattggt ttggataaac tcgcctgccg
     6061 aaccgataga gcggtcgaca tggctttccg ccgccaagtg catcacggca tcgggccggt
     6121 gttgtgcgaa tacgcggtcg agttcggcgc ggtcgcaaat gtccacttgc tcgaaagcat
     6181 agcggggatt atcggcaatg tcggtcagcg attcgagatt gcccgcgtag gtcagtttgt
     6241 cgaggttgac gacggaatct tgggtgtttc ggataatatg acggacaacg gcagaaccga
     6301 taaagcccgc accgccggta acgaggatgg tttttttgtt tgcggtttgc atttaatccc
     6361 catatccgtt ggggttgcgg ctgacccaac gccacgaatc ttccatcatt tgctgcaagc
     6421 cgcgtttggt ttcccagccg gtttgttgtt tggtatggga cgggtcggca aaggaacacg
     6481 ccaaatcacc ggcgcggcgc ggttggattt gatagggaat atttaagccg gatgcggctt
     6541 caaaggcacg gatgatttcc aaaaccgaat aggcgcgccc cgaacccaag ttgaacaaat
     6601 gtacgccggc aacaccgcct ttcgccttca ttgccgcgat atgcccttct gccaaatcca
     6661 tcacatgaat atagtcgcgc attcccgtac cgtccggggt cggataatcg ccgccgaata
     6721 ccgacagttg cggcagcctg cccgaagcca cttggcagat atagggcaaa aggttgttgg
     6781 gaataccgtt gggctgttca ccgatcaagc cgctttcgtg cgccccaatc gggttgaaat
     6841 agcgcaacaa aatcacgctc caacgcggat cggccttttg gatgtcggtt aacatccgtt
     6901 ccaccatcgc tttggatgcg ccataaggat tagcggtatc gcccgggcgc atatcttccg
     6961 tatagggcat tttacgtatc atggcgcgac gcattaaagt aaacgccaaa gcgcgtttat
     7021 actggttatc cagtttccct atatttttac gttacaaatc aagttgttgg tattcatcgt
     7081 gaaaatagaa tttttcggca taacgctgac tcataaaacc ggcatgcggg ctacctgaaa
     7141 aaatcattgc gccatcatcg tcatttaatg tttcatggtt gttttctatt aatgctaaag
     7201 caatttggta attaattgcc aaaatatcgt tagtaatcac acgatagccg cgttttttgg
     7261 cttcataggc aaaggaacag cctccactaa atacatctgc aactgtatct acatcagacg
     7321 gaagctggtc acaaatccag gaagctattt tctctttatt accgatatag ttaattttcg
     7381 gatattgctt attcattttc actcattttt aaaatacttt cagcaatagc ttttgccaat
     7441 aaaggcggta cggcgttacc aacctgctgc tgggcaattt tgctgccgca aaaaataaaa
     7501 ttatcaggga aagattgtaa ggcagctaat tcacgaacgg ttaaagcccg attctgttca
     7561 tagtgaaaaa ctttgcgcat atctcctgta atacaaacgg ctggtttgtt gctgttgtaa
     7621 cggatgtatt tacggatatc acctgttttc ggacgtaatg gttcaggaat atcgttacgg
     7681 ttacctccat ttttaacaaa tgccattttt tctaacattt gtgccgaatg attcatagct
     7741 tcatgatttg caacgtgtgg attgctttcg ccagcagcca gttttggaaa atgtcctatt
     7801 gctgatccaa cagtctgatg ggaaatctgc aaaggttcgg gaaaggaaat tttgccttta
     7861 tccctcctcc cgataaatat cactcggcta cgtatctgag gaacaccgaa atcggctgca
     7921 ctcagtatct tacattccac cgaataaccg atattctgaa atgcttgaat aatctcaata
     7981 cgtgttttac ctgaattgtg tgtatagagt cgcgctacat tttccataac aaaaaaatat
     8041 ggttggacaa ttttaactat tcggacaaac tctttaaata aatggttgcg tgggtcatct
     8101 gtaaatgtcc gtccaatctt tcctgccata ctaaaacctt gacaaggtgg tcctccaata
     8161 atcaaatcaa ctgcttgtcc gttaagacaa ttgattaaat cttgttcggt tagtgtggtt
     8221 aaatcttttt gcagtaattg atgatggggg aagttggtac ggtaagtctg acaataatca
     8281 gactccattt caacagaaag caattgttgg aatccggctt gttcaaaacc caaggatagg
     8341 cctcctgctc ctgagaaaag gtcaatatag gtaagtggtg tgtgcataag tcaaaatcca
     8401 taaactcttc gattatttta ccgcttcagc ttcgcaaacg catccgccat cgccgaattg
     8461 gctggggcgc ggtcgttgcg ttggggtttg cggccggctg tccgttcgcg gctgcggttt
     8521 tcagacggca ttttatgttt tgcgccgccc ggttcgtcat ccaagcgcat ggtcagcgcg
     8581 atgcgtttgc gtgcagcatc gacttccagc actttcactt tcaccacgtc gccagctttc
     8641 accacttcgc gcgggtcttg gacgaacttg ttggacaggg cggagatgtg caccaagccg
     8701 tcctgatgga cgccgatgtc cacgaacgcg ccgaagttgg cgacgttgga aaccacgcct
     8761 tcgagtatca taccgacttg caagtcgctg atttcgtgga taccttcggc aaacgatgcc
     8821 gtctgaaact cgccgcgcgg atcacggccg ggtttttcca gttcggacag gatgtccaaa
     8881 atggtcggca ggccgaagcg ttcgtcggtg aagtcggacg ctttgatttg cttcacgcgc
     8941 tcgcggttgc cgatgagttc ggcggcgcta atgccttgtt gcgccagcat tttggcgacg
     9001 acgggatagg cttcggggtg gacggcgctc gcgtccaacg gctctttacc gccgttaatc
     9061 cgcaaaaagc ctgccgcctg ctcgaaggtt ttttcgccca aacgcggtac tttcagcaat
     9121 tttttgcggc tgtcgaacgc gccgttttca tcgcggtagg caacgatgtt ttgggcaagg
     9181 gtttgattca aaccggaaat tcgcgccaag agcggggcgg aggcggtgtt cacgtccacg
     9241 ccgacggcgt tcacgcagtc ttcgaccacc gcgtccagcg atttggcgag ctggctttgg
     9301 ttcacgtcgt gctgatactg ccccacgccg atggatttgg ggtcgatttt gaccaactcg
     9361 gcaagcgggt cttgtagcct gcgggcgatg gacaccgcgc cgcgcaggga aacgtccaag
     9421 tcggggaact cgcgcgccgc cagttcggac gcggaataaa tcgacgcgcc ggcttcggac
     9481 acgacgattt tatgcagccc cattttcgac atttcacgca ccagttcgcc cgcgattttg
     9541 tcggtttcac ggctggcggt gccgttaccg atggcgatga gcttcacgcc gtgctgttta
     9601 atcaggcgcg acagcgttgc caacatattg ttttcttgat gcaaatagac gatgacggta
     9661 tccagcagct tgccggtgtc gtccaccacg gcgcatttca cgccgttgcg gtagccgggg
     9721 tcgagaccca gcgtggtcag ccgtccggcg ggcgcagcaa gcagcaagtc tttgagattg
     9781 cgggcgaaca cggtaatcgc gtcggtgtcg gcggcttctt tcaaacgatt gagagcttca
     9841 agttccaacg acaaaaagat tttcgcgcgc caagtcaggc gcacggtgtc gcgcagccat
     9901 ttgtggccgt ctgaaacttt gaagcggcgg gcgatgattt gctcgtattc gctttgctgc
     9961 gtaatcggcg tgtcgtcggg ctgatatttg agcgcgatgt tcaacacgcc ttcgttgcgt
    10021 ccgcgcaaaa ccgctagcgc acgatggctg ggcatcgcac gaataggttc gcggtggtca
    10081 aaataatcgc tgaatttttc gctttcggtt tctttgcctc caacaacttg cgcgtggatt
    10141 tcggcttcgt tccacagctt gtcgcgcagc gtgccgatga gttccgcgtc ttcggcaaac
    10201 tgctccatca gaatcgcacg cgcgccgtcc aacgcggctt tggcatcggg gacgttttcg
    10261 ttcaggtagc cttgtgcggc ggcttccacg tcctgcgact gctcggcaag caacacgtcc
    10321 gccagcggct gcaaaccgtg ttcgcgcgca atttgcgcct tggtgcggcg tttgggcttg
    10381 tagggcagat acaggtcttc cagcgcggtt ttgttgtcgg cggcttcgat ttgcgcgcgg
    10441 aggccgtctg aaagtttgcc ttgctcttca atgcttttta acacaacggc tttgcgctct
    10501 tccaactcgc gcaggtattg cagccgctcg gcaagccggc gcagctgcgt gtcgtccagc
    10561 ccgccggtgg cttctttacg gtaacgcgcg ataaacggca cggttgcgcc gtcgtctaaa
    10621 agctcaatag cggcattgat ttgcgcggta gtcgcggaaa gttcttggga aagaatttga
    10681 gtaatgttca tcaatagaat tccaacggac aggccgtctg aaatttcaga cggcctgatt
    10741 taaaaaacaa tcgctttaag gcagcgaatt ataatattcg taggctttgt ccatatcttc
    10801 aaactggtgc atatgccctt tttccagcac catcgcatta tcgcaatatt gcttcatggc
    10861 gctgtggctg tgcgacacca agatgatgga acggtctttg cgcttttcaa acaactcgta
    10921 cttacattta tcggcaaagc gcgagtcacc aactgcaatc acttcgtcaa tcaaatagca
    10981 atcaaactct accgccaacg acaaagcaaa tgccaaacgc gccttcatac ctgaagaata
    11041 acgcttgacc ggctcgtaaa gatattgccc caactcggaa aactcttcgg taaagttctt
    11101 cacataatcg atatcgacat tgtaaatccg gcagatgaaa cgcaaattgt ccataccggt
    11161 cagactacct tgaaacgcac cggagaatgc caaaggccaa gaaatactca ttgtccgctt
    11221 gatttcaccc gtggtcggcg gctcgacacc actaatcaaa cggatcaacg tcgatttacc
    11281 tgcaccgttt cgacccaaaa taccaacttt ctcacccttt tgcagcgaaa aattgatatc
    11341 gtctaacacc gtccgcatac cgccgcgcat ttgatactgc ttggaaacat gttcaaccga
    11401 aatcattgcg gctcgactcc tttactgaat ttactgacca tcgccaagcc aaacaacaac
    11461 aacaccagat tgcacaatac gatataccaa ggattttcat aggtaattac atcgctgcca
    11521 aaatatccgg cacggaacat ttctgtgcca tgcaccatcg gaatcattaa tgcatattct
    11581 tgtaccttgg gcggcaaatt atgcacaaaa aagaacgcac cggataacgg catcatcaca
    11641 aaagtcaatg tgccccaaat cttgccaaac ggctcgaaat taaaggcaat cgaacaaatc
    11701 accaaaccca aaccaatcgc aaaaaaagcc atcaaaagcc aagccatcag catataaaac
    11761 atatctgccg gcatttcaat ccagccaatc gcaatcaata ccgccataat cacaatctgc
    11821 gcaatggttg caccagcaat ttccaaaatc atgcgcgcca agatggtatc caaaactctt
    11881 acattgcggt gataaagcaa gctggcattt gaagaaatcg acccaactgc ccgttttgag
    11941 gcattacgcc acatcatcaa catcggatag ccagtaatcg caaatgcgac aatattcaaa
    12001 gttgaatatc ggtctgccct taaaaatttc cacatcaaga cgataacgaa tgtcatcagc
    12061 aacggctcaa caaacagcca taaaaagcca atattattgc gaccgtaacg ggtgataatt
    12121 tcccgcatca acagcgcacc gattacgcgc ctttgaatgg ctaaagattc ccaaaatgat
    12181 gttttatgca aggctttcat cagtttttat gctcacgaat gctggcagtc aacaggctca
    12241 aaataccata aaccatcaag ccgataatca gagtggcaac aatgttgtat aaccgtttag
    12301 gctcatgtgc caaatccggc aggctcggtt gcgagatcac ttccaaataa agctgctgac
    12361 ggtctgcttc aaccttggca ctttccaaag aagtcatggc ggctgccaac tgctgctctg
    12421 ccaactggtt ttccaaatac acacgctgat attcggcagc ctgattagac aacgaagaat
    12481 gcccaccgcc cgaaatggca cgtaactgtt ggtcaatttc tttacgcaag ctctgctcac
    12541 gcgcctgcaa acccggaatc tgcggattct ccggagtgac tgctttcacc tgatccagct
    12601 gggtttgaat cacaatcaat tcatcttgca gcttggaaac caaccccatt tgcacttccg
    12661 attgcgcttt caaatcaaaa acgccattgg caatccggta atccgtcaga ttctgagagg
    12721 cttcctttac ccgctctgcc gccgttttca ctacttcttc cgcatagcgc accgtatcag
    12781 cacgtgcacg atcgttcaac tggttaatca atgcttcacc ttgttttaac aaagcctcat
    12841 tgattttctt agattccagc gcatcaaagg aagttacatt caacgtggaa atacccgaaa
    12901 ccgtatcaaa attgatcatc acctgatttt tatagtattg ataaaaagcc tcttcctcgc
    12961 cacggaaccc aaacccatta aagcggctga acgcatcacc tttggtttca taaaactcac
    13021 gcaccggcaa gattttacgc agttcatcca aagacgagcg cgaacgcata tactccccaa
    13081 ccgtgtaaat atcatcttgc gcacgggcaa aacctgtgcc ctgcaaaatg gcacccaggc
    13141 cattgagaga agattggctt ttaggcgagc gcaccacaaa gctcgattgc gacgtaaaac
    13201 gatcggaagc gaagaagccg aaatacacca acgaaattac cgtagggata atcaccgtta
    13261 cccaaaataa agggcttagc tttttaatcc aacttttctt tttcggcttt ttacgctcgg
    13321 ctttggtttc agtggcaact gccacaggaa gttgctcaga catcttactt actcacatta
    13381 attagttaaa ttattaatac tgttcgcgcc actggtaacc ggcgagaaca caaacgacaa
    13441 aaatttctgc acttcagcca acggcgcatt cgacacatac aatacatctt tattcttcac
    13501 aggaaagcgc tgcatagaaa atagcgaatg cgcatcagcc atattcacac gatataccgt
    13561 tggaatctct gcctcactgc cataaccttg agcaatccat ttatcctgac gttctgccgg
    13621 caattccacc aatggcgtat agcggaacac aaacacacca cgcgcatcag aacggcgatc
    13681 ttgcaaaccg cccatacggc caatggcttc agaaagcgat aagcctctgg ctgaaaaacc
    13741 gatttcttgt gttctcccca ccgcacccat agacgtaaag gtatagggat tggtaatcat
    13801 ggtaaccaca tcaccgcgac gcagcaaaat attttgtcgc ggatttgcaa ctaaatcttc
    13861 caaggcaaca gttcgtacta cattgccacg tgtcagctgc acattcgtat cctgcacatt
    13921 tgccgttgaa ccacctaccg cagccaccgc atccaacaca cgctcaccgg ctgccgtcag
    13981 cggcatacgc acactattcc cagcacgaat caccgacaca ttcgccgcat tattctgcac
    14041 caaacgcacc atcacttgtg gctgattggc catttttttc aggcggcctt taataatttc
    14101 ctgaacctga ccaggcgttt taccgaccac cgaaatatcg ccaacaaacg gcacagaaac
    14161 cgtaccacgt gccgtgacca actgctctgg caacttagtt tgatgcgcac tacccgagcc
    14221 catcgaagaa aggccaccac caaacaatac tgccggcggc gcttcccaaa tcataatatc
    14281 caatacatca ccaatattta gcgtaccagc cgaagcataa ccatcgccaa actgagtgaa
    14341 tgactgattt atctgagcct tatataataa ctgagcaacc gtatgattca catcaatcag
    14401 ctccacttca ggaatttgaa cttcagattg ttgccctaaa gagacaattt tttttgcgct
    14461 ggggcctgat gaaggaatcg cagagcatcc tacaattaaa cttccacaca ataataatac
    14521 tgcgtgacga atataaaatt tcactttaaa cacaagccaa atcctaatat aattataaat
    14581 ggcctaatta tagcacttaa tcgaaataaa tttatgagta cgtagagtat aattagtatt
    14641 cttctttcca acttccttat acttatatac ttatagattc taaaatcatg aaaagaattc
    14701 tttgcattac aggtaccaga gccgacttcg gcaagctaaa acctttatta gcctatattg
    14761 aaaatcaccc agaccttgaa ttgcatttga ttgtaactgg tatgcatatg atgaaaacat
    14821 atggcagaac ctgcaaggaa gtaactcgag aaaactatca acatacatat ctgttttcaa
    14881 atcaaatcca aggtgaacca atgggtgccg ttttaggcaa taccattacg tttatctctc
    14941 gtctatctga tgaaattgaa cctgatatgg tcatgattca cggcgaccgt ttagaagcac
    15001 tagcaggcgc aactgtaggt gcattaagca gccgtttagt ttgccatatc gaaggtggtg
    15061 aactatctgg tacagtagat gactccattc gtcattctat tagtaaactt tctcatatcc
    15121 acttggtagc aaatgaacaa gctgtcactc gcctagtgca aatgggagaa aaaagaaagc
    15181 atattcacat catcggctcc cccgatttag atgttatggc ctcttccacc ctcccatcct
    15241 tagaagaagt caaagaatat tacggtttac catacgaaaa ttatggtatt tctatgtttc
    15301 accccgtgac tacagaagca catttaatgc cacaatatgc ggcccaatat ttcaaagcat
    15361 tagaagtaag tggccaaaat atcattagca tctaccctaa taatgacact ggcactgaaa
    15421 gtattctgca agaattatta aaatatcaat ctgataaatt tattgcattt ccttccattc
    15481 gatttgaata ctttttagtc ttattgaaac atgctaaatt tatggtcggc aactcaagtg
    15541 caggtattag agaagctcct ctctacggtg tcccttcaat tgatgttggt acacgccaaa
    15601 gtaaccgcca tatgggaaaa tctattattc atacagatta tgaaactaaa aatatctttg
    15661 atgcgattca acaagcatgc agtttaggca aatttgaagc agatgatacc tttaatggcg
    15721 gagatactcg caccagcaca gaaagatttg ctgaagtaat caacaatcct gaaacgtgga
    15781 atgtttctgc tcaaaaacgt tttatcgatt tgaatcttta aattatggaa aaacaaaata
    15841 ttgcggttat acttgcgcgc caaaactcca aaggattgcc attaaaaaat ctccggaaaa
    15901 tgaatggcat atcattactt ggtcatacaa ttaatgctgc tatatcatca aagtgttttg
    15961 accgcataat tgtttcgact gatggcgggt taattgcaga agaagctaaa aatttcggtg
    16021 tcgaagtcgt cctacgccct gcagagctgg cctccgatac agccagctct atttcaggtg
    16081 taatacatgc tttagaaaca attggcagta attccggcac agtaacccta ttacaaccaa
    16141 ccagtccatt acgcacaggg gctcatattc gtgaagcttt ttctctattt gatgagaaaa
    16201 taaaaggatc cgttgtctct gcatgcccaa tggagcatca tccactaaaa accctgcttc
    16261 aaatcaataa tggcgaatat gcccccatgc gccatctaag cgatttggag cagcctcgcc
    16321 aacaattacc tcaggcattt aggcctaatg gtgcaattta cattaatgat actgcttcac
    16381 taattgcaaa taattgtttt tttatcgccc caaccaaact ttatattatg tctcatcaag
    16441 actctatcga tattgatact gagcttgatt tacaacaggc agaaaacatt cttaatcaca
    16501 aggaaagcta aatgcaaaac aacaacgaat ttaaaattgg taatcgttca gtaggttaca
    16561 accacgaacc attgattatc tgtgaaatcg gcatcaatca tgaaggctct ttaaaaacag
    16621 cttttgaaat ggttgatgct gcctataatg caggcgctga agttgttaaa catcaaacac
    16681 acatcgttga agacgaaatg tctgatgagg ccaaacaagt cattccaggc aatgcagatg
    16741 tctctattta tgaaattatg gaacgttgcg ccctgaatga agaagatgag attaaattaa
    16801 aagaatacgt agagagtaag ggtatgattt ttatcagtac tcctttctct cgtgcagctg
    16861 ctttacgatt acaacgtatg gatattccag catataaaat cggctctggc gaatgtaata
    16921 actacccatt aattaaactg gtggcctctt ttggtaagcc tattattctc tctaccggca
    16981 tgaattctat tgaaagcatc aaaaagtcgg tagaaattat tcgagaagca ggggtacctt
    17041 atgctttgct tcactgtacc aacatctacc caacccctta cgaagatgtt cgattgggtg
    17101 gtatgaacga tttatctgaa gcctttccag acgcaatcat tggcctgtct gaccatacct
    17161 tagataacta tgcttgctta ggagcagtag ctttaggcgg ttcgatttta gagcgtcact
    17221 ttactgaccg catggatcgc ccaggtccgg atattgtatg ctctatgaat ccggatactt
    17281 ttaaagagct caagcaaggc gctcatgctt taaaattggc acgcggcggc aaaaaagaca
    17341 cgattatcgc gggagaaaag ccaactaaag atttcgcctt tgcatctgtc gtagcagata
    17401 aagacattaa aaaaggagaa ctgttgtccg gagataacct atgggttaaa cgcccaggca
    17461 atggagactt cagcgtcaac gaatatgaaa cattatttgg taaggtcgct gcttgcaata
    17521 ttcgcaaagg tgctcaaatc aaaaaaactg atattagtta ataataaaat agattaagct
    17581 attcttaaat tcagaatatt gcttatctat attaaaaatt tctaattttt aaggttctga
    17641 ttgaaatcag aaccttattt caactattac tttttactca taatcgaatt atatacttta
    17701 ggactttata atatggctgt tattatattt gttaacggaa ttcgggctgt aaatggcctt
    17761 gttaaatcat ctatcaatac tgcaaacgct tttgctgaag aaggactgga tgttcattta
    17821 attaattttg ttggcaatat tactggagca gagcatttat cccccccatt ccacttacat
    17881 cccaatgtca aaacctccag catcatagat ttatttaatg acattccaga aaatgttagc
    17941 tgccgaaata ttccttttta ttctatccat caacaattct tcaaagccga atacagtgcc
    18001 cactataagc atgttttgat gaaaattgaa tctttattat ctgaagaaga tagcattatc
    18061 ttcactcatc ctcttcaact ggaaatgtat cgtttagcga ataataatat taagtcaaaa
    18121 gccaagctaa ttgtacaaat tcatggtaac tatatggaag aaatccataa ctatgaaatt
    18181 ttggcacgaa atatcgatta tgttgattat cttcaaacgg tatctgatga aatgctggaa
    18241 gaaatgcatt cccatttcaa aatcaaaaaa gacaaattag tttttattcc aaacatcact
    18301 tatcccattt cattagaaaa aaaagaagct gatttcttta ttaaggataa tgaagacatt
    18361 gataatgctc agaaatttaa acgtatctct attgttggca gtattcagcc aagaaaaaac
    18421 caattggatg ccattaaaat catcaataaa attaaaaatg aaaattacat tttacagata
    18481 tatggcaaat ctattaataa agattacttt gaattaatta aaaaatatat taaagacaat
    18541 aagttacaaa accgtatctt attcaaaggt gaatcttccg agcaggaaat ttatgagaat
    18601 acagatatcc taatcatgac atctcaaagc gaaggctttg gttatatatt tctagagggt
    18661 atggtgtacg atatccctat ccttgcctat aattttaaat atggagcgaa tgattttagc
    18721 aattataatg aaaacgcttc agtttttaaa actggtgata tttctggaat ggcaaaaaaa
    18781 ataattgagc tattaaataa cccagaaaaa tataaagaat tagttcaata taatcacaat
    18841 cgcttcttaa aagaatatgc aaaagatgtg gttatggcta aatatttcac tattcttccg
    18901 cgcagcttta ataacgtatc attatcgtct gctttcagcc gaaaagaatt ggacgaattc
    18961 caaaatatta ctttttctat tgaagattct aatgatttag ctcatatttg gaatttcgag
    19021 ctaaccaatc ctgcacaaaa tatgaatttt tttgctttag ttggcaagcg aaaatttcca
    19081 atggatgctc atatccaagg aacacagtgt acgattaaga tagctcataa aaagacaggg
    19141 aatttattgt cgcttttact aaaaaaacga aatcagttga atttatcaag gggatatacc
    19201 ttaattgcag aagataatag ctatgaaaaa tatattggag caatatctaa taaaggtaac
    19261 tttgaaatta ttgcaaataa aaagaactca ttagttacta taaacaaaag taccttagag
    19321 ttgcatgaga ttccccatga actacatcag aataaattac tgattgcttt acccaacatg
    19381 caaacgcctc taaaaattac tgatgataat ttaataccta tccaagcctc cataaaatta
    19441 gaaaagattg gaaatactta ttacccatgt ttcttgccat ctggcatatt taataatatc
    19501 tgcttagatt acggtgaaga atccaaaatt attaatttta gtaaatattc ttataaatat
    19561 atctatgact caattcgtca tattgagcaa catacagata tatcggatat tatcgtttgc
    19621 aatgtttatt cttgggaact tattcgtgcc tcagttattg agagccttat ggaatttacc
    19681 ggaaaatggg aaaaacactt tcagacttct cctaaaattg attatcgatt tgatcatgaa
    19741 ggtaagcgtt cgatggatga tgtcttttca gaagaaacat ttattatgga atttccgcgt
    19801 aaaaatggta tagataagaa aacagcagcc ttccaaaata taccaaacag tattgtaatg
    19861 gagtatccgc agaccaatgg ttacagtatg cgcagtcatt cactgaaaag taatgtagtt
    19921 gcggcaaaac attttcttga aaaattaaat aaaattaagg tagatattaa atttaaaaag
    19981 catgaccttg caaacatcaa aaaaatgaat cgaattattt atgagcattt aggcattaac
    20041 ataaatatcg aagcatttct aaaaccacga ttagaaaaat ttaagcgtga agaaaaatat
    20101 tttcatgatt tcttcaaaag aaataatttt aaagaggtaa tttttccaag cacttattgg
    20161 aatccaggta ttatttgtgc tgcacataaa caaggtatta aggtatctga tattcaatat
    20221 gctgccatta ctccttatca tcctgcgtat tttaaatcac caaaatcaca ttacgttgct
    20281 gataaattgt tcttatggtc tgaatattgg aatcatgagc ttttaccaaa tccaacacga
    20341 gagattggtt ctggtgccgc atattggtat gcattagatg atgtgagatt ttcagaaaaa
    20401 ctgaattatg actatatctt tctatctcaa agtaggattt cttcgcgctt gcttagtttt
    20461 gcaattgagt ttgcattaaa aaatcctcaa ctacagcttt tattttctaa gcatccagat
    20521 gaaaatatag atttaaagaa cagaattatt cctgataatc ttataatctc cacggaatct
    20581 tctatacaag gcatcaatga atctcgcgtt gctgtaggtg tttattcaac tagcttattt
    20641 gaggcattag catgcggcaa acaaactttt gttgttaaat atccgggata tgaaattatg
    20701 tcaaatgaaa tagattcagg gttattcttt gcagtagaaa cacctgaaga aatgcttgag
    20761 aaaacaagcc cgaattgggt ggctgtggca gatattgaaa accagttttt tggccaagaa
    20821 aaataatttt taagttaatc tttaaaagtg caatattttt cttattttaa
//
LOCUS       DBBZYD010000026        20705 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.026, whole genome shotgun sequence.
ACCESSION   DBBZYD010000026 DBBZYD010000000
VERSION     DBBZYD010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20705
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.026"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(61..237)
                     /locus_tag="ACJJDL_000798"
     CDS             complement(61..237)
                     /locus_tag="ACJJDL_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573550.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMRTQAYLYEDLCLDLGGGKNP
                     GSYPICVIEKVPAR"
     gene            complement(240..1598)
                     /gene="murF"
                     /locus_tag="ACJJDL_000799"
     CDS             complement(240..1598)
                     /gene="murF"
                     /locus_tag="ACJJDL_000799"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HGG7573551.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1722..2858)
                     /locus_tag="ACJJDL_000800"
     CDS             complement(1722..2858)
                     /locus_tag="ACJJDL_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HGG7573552.1"
                     /translation="MDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILE
                     AAKKASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQ
                     STAHATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRS
                     DYPWFTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDK
                     DARRFQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGE
                     RTLTHGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDG
                     YDFWGNVPDVQGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(2932..3369)
                     /locus_tag="ACJJDL_000801"
     CDS             complement(2932..3369)
                     /locus_tag="ACJJDL_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573553.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYFPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGGIC"
     gene            complement(3392..4870)
                     /locus_tag="ACJJDL_000802"
     CDS             complement(3392..4870)
                     /locus_tag="ACJJDL_000802"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HGG7573554.1"
                     /translation="MFSKLTPLAETGILPLPCANAAGRLLHSDSRQIKQGDIFVACQG
                     EYTDGRSYIPAAIANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGMLAAQVYGN
                     VSGGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIIGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRRQGATAAAMEVSSHGLDQSRVNGVPFCSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLQHAIINVDDEYGAELVGRLKKDCPDLAVYGYGFSEHADICITDF
                     TASSDGMEAVFQTPWGEGRCRTRLLGRFNAQNLAACIALLCANGYPLDKVLDVLEKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRLLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4895..6640)
                     /locus_tag="ACJJDL_000803"
     CDS             complement(4895..6640)
                     /locus_tag="ACJJDL_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HGG7573555.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTVLTHDGELLPVSFE
                     KQAVAPKGKRVIKASTAKKVRELMVSVTEAGGTGTAGAVDGFDVGAKTGTARKLVNGR
                     YVDNKHVATFIGFAPAKNPRVIVAVTIDEPTANGYYGGVVTGPPFKKIMGGSLNILGV
                     SPTKPLTAAAVKTPS"
     gene            complement(6701..6964)
                     /gene="ftsL"
                     /locus_tag="ACJJDL_000804"
     CDS             complement(6701..6964)
                     /gene="ftsL"
                     /locus_tag="ACJJDL_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HGG7573556.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6961..7947)
                     /gene="rsmH"
                     /locus_tag="ACJJDL_000805"
     CDS             complement(6961..7947)
                     /gene="rsmH"
                     /locus_tag="ACJJDL_000805"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HGG7573557.1"
                     /translation="MSGAESYRHITVLLDEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PELPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGSIPEQSQRKTSEWQ"
     gene            complement(7944..8399)
                     /gene="mraZ"
                     /locus_tag="ACJJDL_000806"
     CDS             complement(7944..8399)
                     /gene="mraZ"
                     /locus_tag="ACJJDL_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HGG7573558.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
     gene            8705..9895
                     /locus_tag="ACJJDL_000807"
     CDS             8705..9895
                     /locus_tag="ACJJDL_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7573559.1"
                     /translation="MSGNPINLHKLTLIMPLPLPSPEARQSSLKLQTLIAEKIGKHGN
                     WIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLARQLQELLSQT
                     AGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQARAPEASQKVV
                     HLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTYSARPLHDLQ
                     LSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQYYHPQRN
                     QGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQSHFLLNL
                     GITELLAQVGKTDSPAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVDWAGFRFGDI
                     CHKL"
     gene            10027..10103
                     /locus_tag="ACJJDL_000808"
     tRNA            10027..10103
                     /locus_tag="ACJJDL_000808"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10061..10063,aa:Met,seq:cat)
     gene            10111..10186
                     /locus_tag="ACJJDL_000809"
     tRNA            10111..10186
                     /locus_tag="ACJJDL_000809"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10144..10146,aa:Ala,seq:ggc)
     gene            complement(10477..11298)
                     /locus_tag="ACJJDL_000810"
     CDS             complement(10477..11298)
                     /locus_tag="ACJJDL_000810"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HGG7573560.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGLGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLRFVSKKNYIPFAYYRIVFGIAIIILWLSGWISWE"
     gene            complement(11331..11975)
                     /locus_tag="ACJJDL_000811"
     CDS             complement(11331..11975)
                     /locus_tag="ACJJDL_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7573561.1"
                     /translation="MKLKHLLPLLLSAALSAQAYALTEGEDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYRIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11978..12841)
                     /gene="ftsN"
                     /locus_tag="ACJJDL_000812"
     CDS             complement(11978..12841)
                     /gene="ftsN"
                     /locus_tag="ACJJDL_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HGG7573562.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKQPVADKA
                     DEVEEKADEPEREKSDGQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTPDKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHE
                     VASLIRSIESK"
     gene            complement(12947..14443)
                     /locus_tag="ACJJDL_000813"
     CDS             complement(12947..14443)
                     /locus_tag="ACJJDL_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HGG7573563.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14457..14777)
                     /locus_tag="ACJJDL_000814"
     CDS             complement(14457..14777)
                     /locus_tag="ACJJDL_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HGG7573564.1"
                     /translation="MFGKQLFEEVGSKISETIVNSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15261..16787
                     /gene="putP"
                     /locus_tag="ACJJDL_000815"
     CDS             15261..16787
                     /gene="putP"
                     /locus_tag="ACJJDL_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HGG7573565.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIVYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            17038..20643
                     /gene="putA"
                     /locus_tag="ACJJDL_000816"
     CDS             17038..20643
                     /gene="putA"
                     /locus_tag="ACJJDL_000816"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HGG7573566.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADKLDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4867 a         5985 c         5041 g         4812 t
ORIGIN      
        1 ggcctgcgcc cgtttgaggt tggcttgccg cccggcaagg tttcggacgg cttttgcaga
       61 ttaacgtgca gggactttct caatcacgca aattgggtaa ctccccggat ttttaccgcc
      121 gcccaagtct aaacataaat cttcataaag atacgcctgc gtccgcattc cggcataaaa
      181 cgcgccgacc agcgcggcaa tcagcaataa ggctttaaaa aaacgtcggc ttttcatttt
      241 cacttatcct ccaatgcctc gaccacttct tccatctgca taaagcgcga acctttcacc
      301 aacacggtgg cgcgttcggg caaatcgtgg cgcaacactt gaatcaacgg gtctttggcg
      361 gcgaaccaca aaccgtccgc gccaaatttt tccgccgctt cgacgctgtt gtcgccgaca
      421 aaataagccg cttcgatgcc ttggtcgcgg gcatacgcgc cgacttcggc gtgcatagcg
      481 gcggcttcgt cctcgcccag ttcgcccata tcgcccatta cgaaaatacg cggcgcaggc
      541 atacgcgcca acacgtcaat cgcggctttc atgctgtccg ggttcgcatt ataagtatcg
      601 tcaatcaggg ttgcgccctt gattccggat ttgacgttca gacggccttt gatattgctg
      661 aagcctttca aaccttccgc cacatcgttc aaactcaaac ctgcagccaa agacagcgcg
      721 gcggcagcgg cggcgttgtg gacattgtgg cggccgggaa caggcagcac cacggcggcg
      781 cgttcgtcgc cgcacaccaa atcaaattcg cacgacaacg gtttcagcac gatattttcc
      841 gcatggacat cgccgctatc gatgccgaaa gtgcgcgtat tcaaattaag cgttgccgtt
      901 ttgaagacag ccatattggc atcttcttga ggaatcagtg ccatgccgtc tgaacataag
      961 ccttgataaa tctcgctttt cgctttggca atatcgccca ctccgtcgaa accgcagccg
     1021 acatgggcgc gcatggcgtt gttgaccaat gcggcatcgg gtttggcgat ttgtgtcaaa
     1081 accgccagtt cgccaaaatg gttcataccc atttcaatca cggcatagcg gtgtttttcg
     1141 tttaatttca acaaagtcaa cggcaatccg atgtggttgt tgaagttgcc tgccgtcgcc
     1201 aaaacggcat tatcgccgaa acggcggcgc aataccgcag ccagcatctc cttcaccgtc
     1261 gtcttgccga ccgaaccggt aatgccgaac acaaacggat tcacattttc acgccacacc
     1321 tttgccaacg tttgcaatgc ggcaagcgtg tcatcgactt tcaacgcgcc atccattgca
     1381 acgcaatctt cgcgcgaaac cacaaccgcc gccgcaccag cagccaatac gtcttcaaca
     1441 aaatcatgcg catcaaaccg cccgcccgcc aatgcgaaaa acacatcgcc cgcgcggatg
     1501 tcgcggctgt cggttacgat gcgcgacacg ggtttgcttt cagacggcat cggaagcttg
     1561 agggcttggc agatgaaatt taggtccagt ggtttcatat ttactttcgt taatattcgg
     1621 gcggcggaca catcggtagc ggctgatttt ttatcgcctg ttttactgtg gtaaaacaca
     1681 gattattttc ccattctcat tcggcatttt ttctgtacgt atcatttttt agacgtattt
     1741 ttagtcgatt tgccttttcc cgcataccac ggcgcggggt cgtcgggcag tccgtcgata
     1801 aaggcaaggt tattgccttc gccctgcaca tcgggaacat tcccccaaaa atcatagccg
     1861 tcatcgggca actcgtcggt ttcgataccc gtccaactgc cgaatccgcg taaaaaatta
     1921 aacgcgctgc gcctcacttt aatcatttcg cgccgcgtgt catcggacga aattttaacc
     1981 agcggcacgc cgtagctttg acgcttccac gcaccatgtg tcaacgttcg ctcgccgcct
     2041 ttaccgacat gcatcaaacc gtggtcggaa aagtaaacca aagaccagct ttctttattt
     2101 tcattcaata tcttaactgt atcttctaaa aatttatcgg tttgcgcgat ggtggaaaca
     2161 tagcaggata ttttttcagt ttgatactga aaccgccgcg catccttatc caaacgtgtg
     2221 caaaaatcac tgtgcgaacc catcaggtgc atcacaatca gccgaggctt cgtgcctgca
     2281 tttcctatca aaacccgttt gaacgccggc aacaaaaggc ggtcgctcaa ccccgcgctt
     2341 ttgccataat cacccctttg ggtaaaccac ggataatcgc tgcgtagggc ataggtggaa
     2401 atttcgttgg caaaatgccc caacattcct tgattagaca gccacgccgt ccgaaaaccc
     2461 gcctgcttcg ccaagctgac gatgttattg ttcggttctc ccggcagccc caaagtctgc
     2521 ggcagcgaaa gattcgtcgc gtgggcggtc gattggtaac cgtttatcaa cagccctttg
     2581 gtctgactca aaaaaggcgt atcgggcaat gggaaaccgt aaacattcat ataatccgaa
     2641 cgcgcgctct caccgataac cacaacataa tttttatact tgggcgcaac atgacggata
     2701 tgccatgttg acgctttttt tgctgcttcc aaaatgtggg cgcgcttggc ggcatattgt
     2761 gccggtgcgg aagccaaatc gtaatacagg tcgaaaatat tcaacaacag gccggcatca
     2821 ggttctcgca aatctttatc gctggcgatt ttatccatca ccgcgcagga caaaatcaaa
     2881 gtcaataata tagtcagcca tattttgctg cggcgtttat agttttttac gtcagcaaat
     2941 accccccccc gatacacaat atctccaaac tgtcaagcca aaaatgaaaa ataatgcctg
     3001 cacaaaataa agcgacccgg gaagattgcc gacaaattca cgcgcctcgg caggattgct
     3061 ttccaatatc gaaccgacta tctgataaga cggcgcacca tacagccagc cgaccggaaa
     3121 atatagggcg gttgtgccga cgtaaatcag taaaacaact gaagaaacgc gcgggaaacc
     3181 gcgtgccaat aataataaaa atacaaccga agccaaagca cccacggcag aataacggta
     3241 gccgtattca tattccaagt gataacctga tgcgatggcc gcgccaaaac aaaaggctaa
     3301 aagcgcgcaa atgcccaatg tattttttaa tgtctgatcc atatttttta ttcgggcgga
     3361 ttgtttcata cgatgccgtc cgaatatccc attatttacg agttaacaaa gcctgtccga
     3421 cgatttcaag atcggaaaaa cggtgcttca cgccttgtac atcctgatag ttttcatgcc
     3481 ctttgccggc aatcaggatg atgtcgtttg cggcggcttg ttcaaccgca taacggatgg
     3541 cggcggcacg gtcggcttcg acgcattcgg gcgcgggaac ggcaggcagg atgtcgttga
     3601 tgatgtcgtg cggattttcc aaacgcggat tgtcgctggt gacgacgact ttatccgcgc
     3661 cctgtacggc tgccgcgccc atcagcaggc gtttgccgcg atcgcggttg ccgccgcaac
     3721 cgaatacgca ccacaaagcc gcaccctgcg gtttgatttc ctgcaaggtg gcgagtgctt
     3781 tttccaatgc gtcgggcgta tgggcataat cgacaacgac caaaggtttg ccgctgttca
     3841 tgatgcagtc catgcggcct gaagcaggac ggattttttc cagtacatcc aataccttat
     3901 ccagcggata gccgttggca cacagcaagg cgatgcaggc ggcgaggttt tgcgcgttga
     3961 accgtccgag caggcgcgtg cggcagcggc cttcgcccca cggggtttgg aatacggctt
     4021 ccatgccgtc tgaagaagcg gtgaagtcag taatgcagat gtcggcgtgt tcgctgaagc
     4081 cgtagccgta aacagccaaa tcggggcagt cttttttcag acgacctacg agttctgcgc
     4141 cgtattcgtc atccacgttg ataatggcgt gttgcaggcc gtgccagtaa aacaggcgcg
     4201 acttgatagc gccgtaggct tccatcgtgc cgtggtagtc aaggtggtcg cgtgtgagat
     4261 tggtaaagat tgcgctgcaa aacggcacac cgttgacgcg cgactggtca agcccgtggc
     4321 tggagacttc catcgcggcg gctgttgcac cttgccggcg gaaacggtag agcagggttt
     4381 ggacatcgac gggggcgggg gtggtgtgcg tggtttcttc caacgcgccc caaaagccgt
     4441 tgccgaccgt gccgataatg gcggtttttt cgcccaacaa atcggcggcc tgcgccagcc
     4501 attgcgtaat ggaggttttg ccgttggtac cggttacgcc ccagactttg aggccgcctg
     4561 aaacgttgcc gtaaacttgc gccgccaaca taccggcacg gtgtttcaaa tctttaatac
     4621 cttgattggg gactttccat tcgggattcc acgcaaattt gccgtcgtcg tcccaaaaaa
     4681 caaaagccgc gccgttggca atggctgcgg ggatataact gcggccgtcg gtatattcgc
     4741 cctgacaggc aacgaaaata tcgccttgtt tgatttggcg gctgtctgaa tgcaacaaac
     4801 gccctgccgc gtttgcacac ggcaggggca gaatgccggt ttcagccaaa ggggttaact
     4861 tgctgaacat aaaacaatct cgttgatact tggattaaga cggtgttttg acggctgcgg
     4921 cggtcagggg cttggtcgga gaaacgccca agatgttcag gctgccaccc ataatttttt
     4981 tgaagggcgg ccctgtcact acgccgccgt agtaaccgtt tgcagtcggt tcgtcgatgg
     5041 ttaccgccac aatcacacgg ggatttttgg ccggggcaaa accgatgaaa gtggcaacgt
     5101 gtttgttatc gacgtatcgt ccgttaacca acttacgcgc cgtaccggtt tttgcgccga
     5161 catcgaaacc atccacagca ccggcagtac cggtaccgcc ggcttcagta acggaaacca
     5221 tcaactcgcg cacttttttc gcagtagagg ctttgatgac gcgcttgcct ttaggggcaa
     5281 ctgcttgttt ttcaaagctg accggcaaca attcgccgtc atgggtcaag acagtatagg
     5341 cacgcgccaa ttgcaacagg ctcaattgca ggccgtaacc gaaagacatc gtcgcctgtt
     5401 cgataggccg ccacctgcgc caatttctca acaaacctgc agtttcgccc ggaaagcccg
     5461 agtgcatacg cacaccgatg cccaactcat gatagaagtc atacatttct tcagcaccga
     5521 aacgcgcaga cagtttgctt gtgccgacgt tggacgattt ctgcatgatg ccgcgcacat
     5581 ccaaagaggg gtaaacatga gtatcgcgca cgggagacgg tccgatttta taaggctgcg
     5641 tattcagccg ttcgttcaaa tcggttttgc ccgcatccaa tgccttcgca atcacaaacg
     5701 gtttgattgc cgaaccgggt tcgatcatat cggttacggc acggttgcgc cgctgttcgc
     5761 tgtctgcccg gccgggcctg ttgggatcgt aggcgggcgt attggccaag gcgaggattt
     5821 cccccgtgcg ggcatccaaa accaccaccg ttccggcttt tgcctgatgg tattcgaccg
     5881 ccttgttcaa ctcttcatag gccaaggtct gaatcctctg atcgagggaa aggatgatgt
     5941 ctttgccgtt tttcggggct ttattgcgcg gggagtccaa gctgtccaca atattgccct
     6001 gccggtcccg caaaacgact tccgcgccgt cttcgccatg caggctgtct tcaagcgaaa
     6061 gttccaaacc ttcctgacct ttgccgtcaa tatcggtaaa tccgatgacg tgtgcaaaca
     6121 ggttgcccat cgggtaatgg cgttttaatt ctttttcaaa tacaaagttt tccaaaccca
     6181 aggctttgac ctcttcggca accttgggat cgagctgccg cttaatccag ataaacgact
     6241 tgcctttctg ttcgagcttg ttcctcaaaa catcaaccgg cacatcgaca agctcggaca
     6301 ggcgttccaa ttgtgcggca gacggcattt ccttcatctc tttaggcacg gcaaacaggg
     6361 actccgtcgg cgcgctcaac gccaaaaccg caccgttccg gtccgaaacc gtaccgcgtg
     6421 tagccggcaa tgtttgagtc cgcacaatcc ggttgtcgcc ctgttctttc aaaaagttat
     6481 acgttaccgt ctgcagatac agtccgcgag caatcagacc ggcaaacaag accgctattg
     6541 ccatcaggac gaagctgatc cgtccgttac tggtcatcgg ctttttgacc tgctcttctt
     6601 tgggcagcat ccgaggctta tattcgctct taatcaacat ttttacttct cgttattatt
     6661 atcctgacgc aggaatccga ttccggcaca caggctgctt ctatctttga tgcgccacca
     6721 taaaggtatt gcccgaaacc ggcggatgga ggttttgttt ttctgccgcc gccctgatcg
     6781 cttcgtggtt cgccaaacgc gcctgttgca gcctcatttg cgcataatcc tgctccaagg
     6841 cgatttcctg ttttttcgcc ttgtccaaag ctgtgaagtt gagcctgtac tggttttgct
     6901 gcatcacaac ggaaaaagcg gaaacgcaca ccgcaagcag cagaaggaaa ttcaatttgt
     6961 tcattgccat tcagacgttt ttctctgtga ttgttccggt atcgaaccgg cagtccgctc
     7021 cgccacacgc aaaaccgcac ttctcgccct cggattggcg gcaatttccg cctcacccgg
     7081 ctttaatgcc ctgcccacga ttttcagggg cagctcgggc aaatccgctt ccctgaccgc
     7141 cgcccaacgc ggcagaggcg cgtgttgcga atattttttg acaaactgct tcacaatgcg
     7201 gtcttccaac gaatggaaag caatgaccgc caaacgtccg ccctctttca gacgacacat
     7261 gacctgcggc aatactgccc ctacttcttc aagctcgcgg ttaataaaga tgcggaccgc
     7321 ctggaaggtg cgcgtcgcag gatcctgccc ccgctcgcga gtacggacgt tttgtgccac
     7381 gatctgcgcc agcttgcggg ttgtatcgat tggactttcc gcccgttgcg caacaatggc
     7441 gcgcgcaatc tggcggctaa accgctcttc accataattc ttgattacct cgtgcaaatc
     7501 ctgttccgac gcaaccgcta tccactctgc ggcagacata ccgcgcgtcg tatccatacg
     7561 catatccaaa ggggcatcga aacggaagct gaaaccgcgg ctgccgtcat cgatttgcgg
     7621 ggacgaaatc cccaaatcaa acagcgcacc gtccaccttg ccgataccca aaccgtccaa
     7681 tgccgtctga aacgaagcaa aaccgccatg cacgacaccg acccgtttgt ccgaacgcgc
     7741 cagctcttct gccacagcaa tcgcctgagg gtctttgtcg aaaacaatca accgccccgc
     7801 atcgcccaaa cgcgacaaaa tcagccggga atgccctccc ctgccgaacg taccgtccac
     7861 atagacaccg tcttcgcgca cggcaagcgc atccaccgcc tcatccagca agaccgtgat
     7921 atgccggtaa ctttctgctc cactcacaat tgcaaatccg tctgactcaa ctggaaggca
     7981 agttcgtcag gatcgtcatc caaagcctga accatttcgg cctcccactg ctcacgaccc
     8041 caaagctcca aacggttggc acgaccgacc aaaacgactt cacggtcgaa atccaccctt
     8101 ttcctcagtc cggcaggaag cagcacccgg ccggcgctgt cccattctaa aatttccgcg
     8161 ttatgcagca aaagattttg aaaccgccgc aaaacagggt tatccgccac ttttaagttt
     8221 aaaagttgcg ccgcaacctt ttcccactcc gcaacagggt acatcaacag cttgtgtttc
     8281 gactcgagcg ttaccactac ggcaggcgta tagaggcgcg acagaatgtc acggaatttg
     8341 gcaggaacag ccaaccgccc cttactgtcg atgcttaatt cgtgtgcgcc gccgaacatg
     8401 acatgtccca agccgaaatc aaaatcacaa gggtaaaaga gacactttgc cccacaattc
     8461 cccaccaatc gacactataa gaaattttaa acactcggtc aaatcagggc atgaaaactc
     8521 attaacatat ctgaaatttt tattcctttt aaaaacaata agataaaaaa tgacgacaac
     8581 ggcacggcgg gtgcggtaca gagtgaccga accaataaac aactatatat gattaattta
     8641 ataatataaa cacaatatat agtattaaga taaagccatg acagcacccg taccaacgtg
     8701 taatatgtcg ggaaatccaa taaatttaca caagctaaca cttatcatgc ccctccctct
     8761 cccctctccc gaagcacggc aatcctcgct caaactgcaa accctcattg ccgaaaaaat
     8821 cggcaaacac ggcaactgga ttccattttc acgttttatg gaattggttt tatacgctcc
     8881 gcaatacggc tactacaccg gcggcagcca taaaatcggc aataccgggg attttattac
     8941 tgcaccgacc ctcacctctc tgtttgcaca gacactggca cgccaacttc aagaacttct
     9001 atcccaaacg gcgggcaata tctatgaatt cggcgcggga accggacagc ttgccgccga
     9061 tttgttgggc agcatttcgg acggcatcag ccgttactat attattgaaa tatcgccgga
     9121 gctggcagca cgtcagaaaa acctgattca agcacgcgca ccggaagcat ctcaaaaagt
     9181 tgtccacttg accgcacttc ccgaagcgtt tgacggcatc atcatcggca acgaagtact
     9241 cgatgccatg cctgtcgaaa tcgtccgtaa aaatgaaggc ggctcattcg agcatgtcgg
     9301 cgtttgccta gataatgacc gttttaccta ttcggcacga ccgctgcacg acttacagct
     9361 atctgccttg gcttccctct attttcctca aacagattat ccctacacca gcgaactaca
     9421 tccgcaacaa tatgccttta tccgcaccct tgcctcaagg cttgaacgcg ggggtatgat
     9481 attcatcgac tacggttttg atgcagcgca gtattaccac cctcaacgca atcaaggtac
     9541 tctgatcgga cactaccgac atcacgttat ccacaatcct tttgacttca tcgggttggc
     9601 cgacctgacc gcgcatgtca actttaccga cattgcccaa gccggtacgg atgcaggact
     9661 ggatttgaca ggctatctgc cccagtccca ttttctgctg aatctgggca taaccgaact
     9721 gttggcacaa gtgggaaaaa cagactcgcc cgcctacatc cgtgaagctg ctgccgttca
     9781 gaaactgatt gaccagcatg aaatgggcga actgtttaaa gtcatcgcat tcggaaaaaa
     9841 tatcggcgtc gactgggcag gattccgctt cggcgacatc tgccacaaac tctaaccctc
     9901 atgccgcctg aatccgcttc agacgacata aactttttaa catttaaaaa cagtcaacta
     9961 attcaaaatt aaaaaatacg gcttgtcaaa aaaacagaaa aacatataat agcgtcttca
    10021 cgaaacggcg aattagctca gtcggttaga gcagaggaat cataatcctt gtgtccgggg
    10081 ttcgagtccc tgattcgcca ccaaattttc gggggtatag ctcagttggt agagcgcttg
    10141 catggcatgc aagaggtcag cggttcgatc ccgcttacct ccaccagata aaaaagcaca
    10201 gaccgtaaaa aggtatgtgc ttttttatta cctgattacc ggcaaataaa gaataaacca
    10261 ctgccttcaa aacaggcaat cgactttaaa cctatcgccc cgcctgtcct gattttatag
    10321 tgaattaaat ttaaaccggt acagcgttgg ctcgccttgc cgtactatct gtactgtctg
    10381 cggcttcgtc gccttgtcct gatttttgtt aattcactat atcagcccgc cagacaaacc
    10441 cgacccgaat aatgtcttca ggtcgggttt atggtttcat tcccaactta tccagcctga
    10501 cagccacaat ataatgatgg caataccaaa aacaatgcgg taataggcaa aaggaatata
    10561 atttttcttg gaaacaaacc tcagcaacgc ttttaccgct accaagcctg aaacaaaggc
    10621 agcaataaag cctatcagaa tcaaaccgac atcatgcagg gtgaaaaatc ggtaatgttt
    10681 caggacatca taagccgttg cggcaaccat catcggcaca gccaagaaaa acgagaattc
    10741 tgtcgcagtt ttccgttcga tgccccaaag catcccgccc ataatcgtac tgcccgaacg
    10801 ggacgtaccc ggaaccagtg caaacacttg ggcaacgccg atcatcaagg catcaatcgg
    10861 acgcaatgca tcaacatcgg caattttagg ctctgctcgg ctttggcgtt tctccaccca
    10921 caaaataaaa aaaccgccca aaaccagcat gactgcaaca ctcaaggggt taaacagata
    10981 ctctttgatt tgtttgccga acaacagccc catcacggcg gcaggtataa aagcaatggc
    11041 aagattaagg acgaagcggt tggctttccg gtcttttccc aagccgtgca acacattgct
    11101 gaaacgttgc cggtattcaa acactaccgc caaaaccgca ccgagctgga tggcaatttc
    11161 aaaaaccttg tgattgctgt gaaaaccaat cagattgccg aacacaatca aatgtccggt
    11221 gctggaaatc ggtaaaaatt cggtaaaacc ttctaccaag cccatcatca gggctttcag
    11281 gacaatcaga aaatccattg cttgcgcttc tttcggatac gggagttcgg ctatttctgt
    11341 acagcagggg tctgacgctt gcgttcttcc ctgactttgg caaccaattc tttaatcgta
    11401 tgaacgccgc cgtcaaagcc gttattgaag ataacgcggt attttccgcc gacaataacg
    11461 gtcggcgtgc tgtcgatgcg gtattgttcc gtcagtttct gcatttttaa tgcggcggcg
    11521 gcagcttcgg gggaatcata ggcgcgcatc agttttttgc cgtcaaagcc tttttgagac
    11581 aaagcccatt ttccggcaac agccctgttt tccaagcgga ttttttgttc gtaaactgct
    11641 ttaaacacgg cagggtttgc ctgatatttc aaacccgaca aattgacggc agccgccatc
    11701 ctggccagac cgagcatttc aggctgccag accacgtgct ccgtcctcaa ataggcatca
    11761 gacggcaatg ccttgcccag tttcaataac aaaggatcga aatgatggca atgtacgcag
    11821 aaatagccga aaaattccaa aacctcaatt ttacccgact gttcttgagg aatgggttta
    11881 tccaacacaa gatagtcttc cccttccgtc agggcatatg cctgcgcgga caacgctgcc
    11941 gacagcagca gcggcaacag atgtttgagc ttcataatta tttactttcg atagaacgga
    12001 tcaggctggc gacttcatgt tttttcaact cgtcctgcat ttttttcacc gcatcggcag
    12061 acatattgcc gctttgcacc cggtaaagcg ttttatgtcc cgcctgataa ccgaccacct
    12121 tggaagatat gcccaagatt gccagtttgg cacgctgtcc ttccgcgctc cggcggtcgg
    12181 catacgcgcc catttgcaga taatgcgttg cttccgcctt gtcgggcgtt ttcattttct
    12241 gcacttcttt ggcagcggca ctgcgcgctt tttcgatgct gccgctgttg aggatttgtt
    12301 ccggggtcgg tttgggtgca actttttcct tctccgcctt tttctcttct tttgaagctt
    12361 ttttctctgt ttctttagat ggttttaccg cttgtttttt aaccgtttcg gcatctttct
    12421 tctgcgcttt ttccccgacg gtttgttcac gctcttccgt cagtgctttc ttgcgcactg
    12481 cctgtccgtc cgacttttcc cgctccggct cgtccgcctt ttcctcaacc tcgtcggctt
    12541 tgtcggcaac gggctgcttg tcggcagctt tttccgcatc cgactgctct gcctctttcg
    12601 cagcatccgg ttcggacaag gcgttttgat cggccggttc aggttggatg tcttccttag
    12661 gctggttttt cggtttcagg atttccgttt ctgcaggctg cttcgacgga accgggattt
    12721 tgaacgcatt ttgaccgctc tggttcagat aaaacaaaat accggcaata atgaccgtcg
    12781 ccagtatcaa accgaagaaa aaaccggaca gaccttttcc ggattgggaa aatttgttca
    12841 taaacatacc ttaatgtgtt tcagacggca ttaacgccgt ttgcttacgg gcggatattc
    12901 taacaatatc gccatatttg ggcaaaacct gcttccattc ccattcctat aaagcacgac
    12961 ggaaacctat ggctttcatg acgtggcttc tgccgacttc ttcgtcgccc gccaaatccg
    13021 ccaatgtacg cgccacgcgc ataatgcggt ggaagctgcg ggcggaaagg gagagttttt
    13081 ccagcaggcc gcccaatgct tcctgcgctt ctttttgaat gcgggcttgg gaatcgagtt
    13141 cgctgacact caaagcggcg ttgactttgc cctgccgcgc gtattgtttg tcgcgggcgg
    13201 cgataacgcg ttccaaaacg gacgcgctgc tttcacccgc ttcctgctgc atcagttcgg
    13261 cggcggacag gctggggact tcgatggtca aatcgatgcg gtcgagcagc gggccggaaa
    13321 ttttgctgcg gtaacgcgcg acgctttcgg gcgtgcagcg gcagggtttg acgggatgcc
    13381 cgagataacc gcacgggcag gggttcatgg cggcaacaag ttggaatttg gcaggataga
    13441 cggcttggcg cgccgcgcgg gaaatgtgga tttcgccgtt ttccaacggt tcgcgcaaaa
    13501 cttccaaaac tttgcggtcg aactcgggca gctcgtccaa aaacaatacg ccgtggtgcg
    13561 ccaatgaaat ctcgcccgga cgcgggtcgg aaccgccgcc gaccatagcc gccgcgctgg
    13621 cactgtgatg cggactgcgg aaaggacggt ggctgtcgag ttgttgctgg tggttgggca
    13681 ggagcgaacg caatgcccaa acttcaacca attcgtcttc ggtcagcggc ggcaggatgc
    13741 ctggcagccg ttgggagagc atagacttgc ccgttcccgg cggacccatc atcaagaggc
    13801 tgtgtccgcc tgcggcagcg atttccaaag caaggcgggc agtgtgctga cctttcacat
    13861 cacacaaatc aggttgtccg ccatgttcag acggcatttg cggtacggaa cattcggttt
    13921 gcgccaaagg ttcgataccg ttcaaatggg cggcgacttc gcccaaagag cgcgcgccgt
    13981 aaacggtaat gccgcgcatc acggcggctt gtcctgcgtt ttcttcaggc aaaacaaatg
    14041 cacgttttgc ctgcataccc tgccacgcca tcgccaacgc gccgcgcacg gggcgcaaca
    14101 gccccgacag tgccaattcc cccgcaaact cgtattccgc cagtttttcg ggcgcaacct
    14161 gccccgatgc ggcaaggatg ccgattgcaa tcggcaaatc gaaacgcccc gactctttgg
    14221 gcaggtcggc gggggcgagg ttgacggtga tttttttggc ggggaattca aaaccgcttt
    14281 gaataatggc ggcacggacg cggtcgcgac tttctttgac ttccgtatcg ggcagtccga
    14341 cgatgttgaa atgtggcagg ccgttggcaa ggtgggcttc cacttcgacc aacggcgcat
    14401 tcataccgct caaggcgcgg ctgtaaacca aggcaagcga catatttcag acggccttat
    14461 tcgccggctt cggtttgctg cctgatttcg gcgacggctt cttcggcagc ggcttcagcc
    14521 gcttccaatg ctgcccgttc gggattttgc gcggcttcga gttttgccaa acgcgcttcc
    14581 aaagccgcca gtttggtacg ggttttgatt aaaacctgct gctggatgtc gaattcttcg
    14641 cgcgtaacca aatccatacg gttgaacgcg ccgcccagca tcgccttaat atttttttcc
    14701 acatctttgg cagggctgtt gacgatggtt tcgctgattt tcgaaccgac ttcttcaaaa
    14761 agctgcttgc cgaacataat ctgtatcctt cctgaacata tcaaattcaa tcggctattg
    14821 tataaggaaa aatgccgtct gaaaacgggc ggcggataat cggcaaaaca taccgcgcct
    14881 cctttgcggt tgctaaatta cacctcaaaa cacctgccgc ctgaaaacgg atttcatatt
    14941 ccgcgcaacg ccagattaca agacactaca aaacaatata ctgttttaaa tgatttttcc
    15001 gacgcgcatc gtttcaaact cggcttttta agccattaag tgctttgcaa acaacagaaa
    15061 ttgggttatg ctgaaacgga ttatttacaa tttcatatag ttttattaca tatcttattg
    15121 tgattgaaga taatttatcc gaatccccct ttcgggtatc cggattttcc gttgtacttt
    15181 tatttagaaa aacatttcag gcgcaagttg cttgcaattt caaagcctgt aattctgaag
    15241 ttttagacga ggaatagcac atgaatccca tgtacattac ttttgcaatc tatctggttg
    15301 cagtccttct catcgggctt gccgcctatt tttctacgcg caatttcgac gattatattt
    15361 tgggcgggcg cagcctaggc ccgtttgtta ccgcgatgtc ggcaggcgcg tccgatatgt
    15421 ccggctggct gctgatgggt ctgccgggcg cgatttacct gagcggtttg aatgaggctt
    15481 ggattgccat cggcctcttg gtcggcgcgt atttcaactg gctcttggtg gcgggccgcc
    15541 tgcgcgtgca taccgaatac gccaacaatg cgctgacgct gccggattat ttcttccacc
    15601 gcttcggcgc gggcggacac ttgatgaaag tggtttccgc actaattatc ttgtttttct
    15661 tcacaattta ctgtgcttcc ggcattgtgg ccggcgcaac cctgttccaa agtctgtttg
    15721 aaggtatgac ttacaaccag gcaatgtggc tgggtgcggg cgcgaccatc gtctatacct
    15781 tcttgggcgg tttcttggca gtcagctgga cggatacgct gcaagcatct ttgatgattt
    15841 tcgccctgat tttaacgccg gtgatggtct atctgggctt gggcggcgcg gaacagatgt
    15901 ctgccgcgat tcaaagcgtc gccgcaggca cgggcaaaga atacggcagc ctgtttgccg
    15961 gtacgaccgt catcggcatc atttccaccg ccgcatgggg cttgggctat ttcggacagc
    16021 cgcacatttt ggcgcgcttt atggcggccg aaagcgcgaa atcgctggta tccgcacgcc
    16081 gcatcggcat gacttggatg gcgttgtgcc ttgcgggcgc ggtagcggtc ggttatttcg
    16141 gcattgcgta tttcggtgca aatcccgaca aagtttcttc tatgagcggc aaccacgaac
    16201 gcatcttcat cgcgctttcc accctgctgt tcaacccttg gatcgccggc attattttga
    16261 gcgcgatttt ggcggcggtg atgtccaccc tgtcctgcca gcttttggtt tgctccagcg
    16321 cgattaccga agacttctac aaaggctttt tgcgtaaaaa cgcgcaacag tcggaactgg
    16381 tatgggtcgg ccgcctgatg gtcttggcga ttgccgtgat ttccatcctg attgcttccg
    16441 atccgaacag caaagtattg ggactggtgt cttacgcgtg ggcaggtttc ggtgcggcat
    16501 tcggcccgat tgtgattctg tccgtattgt ggaaacgcat cactgcctac ggcgcgttgt
    16561 cgggtatggt tgcaggtgcc ttaaccgtgg tcgtatgggc ggaatgggtg aaaaaaccgg
    16621 ctcaagcggc aggcgaaagc ggcttgttga cgatgtacga aatcgtcccg ggctttattg
    16681 tttgcttgat cgttgccgtg ttggtttccc tgttcaacaa agaaccttcg cgcgaaaccc
    16741 aagaacgctt tgaaaaagcc gacgcagatt accgcgccgc ccgataaacc cctttcagac
    16801 ggcacggcat cccggttcgt gccgtctgaa cccgtttccg ggtcaaacac aaataaacct
    16861 tgcctgcata caggccttat ttgtgtttta cccgtttcat tttcaaagaa acggaagcac
    16921 ctaccctgcc cgcatttgaa gccttgtatt tcatctgcgg atttattacg atattaccgt
    16981 attcagaccg caccgatgcc gtctgaaccc cccgaaaaac tttggagaat ccaaaaaatg
    17041 tttcattttg catttccggc acaaactgcc ctgcgccaag cgataaccga tgcctaccgc
    17101 cgtaatgaaa tcgaagccgt acaggatatg ttgcaacgtg cacagatgag cgacgaagag
    17161 cgcaacgccg cctccgagct tgcccgccgt ttggttaccc aagtccgcgc cggccgcacc
    17221 aaagccggcg gcgtggatgc gctgatgcac gagttttcac tctccagcga agaaggcatc
    17281 gcgctgatgt gtctggcaga agccctgctg cgtatccccg acaacgccac gcgcgaccgc
    17341 ctgattgccg acaagatttc agacggcaac tggaaaagcc atttgaacaa cagcccttcc
    17401 ctcttcgtca acgccgccgc ctggggcctg ctgattaccg gcaaactgac cgccacaaac
    17461 gacagacaaa tgagttccgc actcagccgc ctgatcagca aaggcggcgc accgctcatc
    17521 cgccaaggcg taaattacgc catgcgcctg ttgggcaaac agttcgtaac cggacagacc
    17581 attgaagaag ccctgcaaaa cggcaaagaa cgcgaaaaaa tgggctaccg cttctccttc
    17641 gatatgttgg gcgaagccgc ctacacccaa gccgatgccg accgctacta ccgcgactat
    17701 gtcgaagcca tccacgccat cggcaaagat gcggcaggac aaggcgttta cgaaggcaac
    17761 ggcatttccg tcaaactctc cgccatacat ccgcgctact cgcgcgccca acacggccgt
    17821 gtgatgggcg aactgttgcc gcgcctgaaa gagctgttcc ttttgggtaa aaaatacgat
    17881 atcggtatca acatcgatgc cgaagaagcc aaccgtctgg agctgtcttt ggatttgatg
    17941 gaggcactcg tttccgatcc cgatttggca ggctacaaag gcatcggttt cgttgttcaa
    18001 gcctaccaaa aacgttgtcc gttcgttatc gactacctga tcgaccttgc ccgccgcaac
    18061 aaccaaaaac taatgatccg cctcgtcaaa ggcgcgtatt gggacagcga aatcaaatgg
    18121 gcgcaagtgg acggcttgaa cggctatccg acctacaccc gcaaagtcca caccgacatc
    18181 tcctacctcg cctgcgcgcg caaactgctt tccgcgcaag acgcggtatt tccgcaattc
    18241 gccacccaca acgcctacac cttgggcgca atctaccaaa tgggcaaagg caaagacttt
    18301 gaacaccaat gtctgcacgg catgggcgaa accctgtacg accaagtcgt cggcccgcaa
    18361 aacttaggcc gccgcgtgcg cgtgtacgcc ccggtcggca cacacgaaac cctgctcgcc
    18421 tacttggtgc gccgcctgtt ggaaaacggc gcgaactcgt ctttcgtcaa ccaaatcgtc
    18481 gatgaaaaca tcagcatcga cacgctcatc cgcagcccgt tcgacaccat cgccgaacaa
    18541 ggcatccacc tgcacaacgc cctgccgctg ccgcgcgatt tgtacggcaa atgccgtctg
    18601 aactcgcaag gcgtggactt gagcaacgaa aacgtattgc agcagcttca agaacagatg
    18661 aacaaagccg ccgcgcaaga cttccacgcc gcatccatcg tcaacggcaa agcccgcgat
    18721 gtcggcgaag cgcaaccgat taaaaaccct gccgaccacg acgacatcgt cggcacagtc
    18781 agctttgccg atgccgcgct tgcccaagaa gcggttggcg cagccgttgc cgcgttcccc
    18841 gaatggagtg cgacacctgc cgccgaacgc gccgcctgcc tgcgccgttt cgccgacctg
    18901 ctcgaacagc acacccccgc gctgatgatg cttgccgtgc gcgaagcagg caaaacgctg
    18961 aacaacgcca ttgccgaagt gcgcgaagcc gtcgatttct gccgctacta cgcaaacgaa
    19021 gccgaacata ccctgcctca agacgcaaaa gccgtcggcg cgattgtcgc catcagcccg
    19081 tggaacttcc cgctcgccat ctttaccggc gaagtcgttt ccgcattggc ggcaggcaac
    19141 accgtcatcg ccaaacccgc cgaacaaacc agcctgattg ccggttatgc cgtttccctc
    19201 atgcacgaag ccggcatccc gacttccgcc ctgcaactcg tcctcggcgc aggcgacgtg
    19261 ggtgcggcat tgaccaacga tgcccgcatc ggcggcgtga ttttcaccgg ctcgaccgaa
    19321 gtggcgcgcc tgatcaacaa agcccttgcc aaacgcggcg acaatcccgt cctgattgcc
    19381 gaaaccggcg gacaaaacgc catgattgtc gattccaccg cacttgccga acaagtctgc
    19441 gccgacgtat tgaactccgc cttcgacagc gcgggacaac gctgctccgc cctgcgtatc
    19501 ttgtgcgtcc aagaagacgt tgccgaccgt atgctcgaca tgatcaaagg cgcgatggac
    19561 gaactcgtcg tcggcaaacc gattcagctc actaccgatg tcggccccgt catcgatgcc
    19621 gaagcacagc aaaacctgtt gaaccacatc aacaaaatga aaggcgttgc caagtcttac
    19681 cacgaagtca aaaccgctgc cgatgtcgat tccgaaaaat ccacgttcgt ccgccccatc
    19741 ctgtttgaat tgaacaacct caacgaactg caacgcgaag tcttcggtcc cgtcctgcac
    19801 gtcgtccgct accgcgccga caaactcgac agcgtcatcg accaaatcaa cagcaaaggc
    19861 tacgccctga cccacggcgt acacagccgc atcgaaggca cagtacgcca catccgcagc
    19921 cgcatcgaag ccggcaacgt ttacgtcaac cgcaacatcg tcggcgcagt cgtcggcgta
    19981 cagcccttcg gcggacacgg tctgtccggc acaggcccca aagcaggcgg ttcgttctac
    20041 ctgcaaaaac tgacccgcat ccccgaatgg gttgccccga ccctgagcca aatcggacag
    20101 gcagacgaag ccgcgctcaa acgcctcgaa gcactggttc acaaactgcc gttcaacgcc
    20161 gaagagaaaa aagccgcagc ggccgctttg ggacacgccc gcatccgcac cctgcgccgt
    20221 gccgaaaccg tccttaccgg cccgaccggc gagcgcaaca gcatctcatg gcacgcgcca
    20281 aaacgcgtct gggtacacgg cggcagcctc ctgcaagcct tctgcgccct aaccgaactt
    20341 gccgcctccg gcgtacaggc agtggtcgaa cccgacagcc cgctggcttc ctacaccgcc
    20401 gacttggaag gtctgctgct ggtcaacggc aaacccgaaa ccgccgacat cagccacgtt
    20461 gccgccctgt cgcctttgga cagcgcgcgc aaacaggaac ttgccgccca cgacggcgca
    20521 ctcatccgca tcctcccttc ggaaaacgga ctcgacatcc tgcaagtgtt tgaagaaatc
    20581 tcttgcagcg tcaacaccac agccgccggc ggcaacgcca gcctgatggc ggttgccgac
    20641 tgattttacc gaaatccccg agcgcggccc gtgaaccaat gccgtctgaa aacctttcag
    20701 acggc
//
LOCUS       DBBZYD010000027        20665 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.027, whole genome shotgun sequence.
ACCESSION   DBBZYD010000027 DBBZYD010000000
VERSION     DBBZYD010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20665
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.027"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            4..234
                     /locus_tag="ACJJDL_000817"
     CDS             4..234
                     /locus_tag="ACJJDL_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HGG7573567.1"
                     /translation="MAQKEFEEFVNNVKEYDILESFSYFLNKRVAHNIWKIYFSDESV
                     IFIRKSEENGKTVHEFVYQEYTDSSDFNSMFE"
     gene            176..616
                     /locus_tag="ACJJDL_000818"
     CDS             176..616
                     /locus_tag="ACJJDL_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7573568.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLERSQIKFQSSNNLKSS
                     GFKLDSSSKSFAKFIEAANFEHIPTGAKARINAKITASVSRAGVLAGVGKLARLGAKF
                     STRAVPYVGTALLAHDVYETFKEDIQARGYQYDPETDKFAKVSG"
     gene            complement(1116..1191)
                     /locus_tag="ACJJDL_000819"
     tRNA            complement(1116..1191)
                     /locus_tag="ACJJDL_000819"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1156..1158),aa:Asn,seq:gtt)
     gene            complement(1284..1643)
                     /locus_tag="ACJJDL_000820"
     CDS             complement(1284..1643)
                     /locus_tag="ACJJDL_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HGG7573569.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(1666..2310)
                     /locus_tag="ACJJDL_000821"
     CDS             complement(1666..2310)
                     /locus_tag="ACJJDL_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HGG7573570.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRA"
     gene            complement(2312..2848)
                     /locus_tag="ACJJDL_000822"
     CDS             complement(2312..2848)
                     /locus_tag="ACJJDL_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HGG7573571.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(2860..3957)
                     /locus_tag="ACJJDL_000823"
     CDS             complement(2860..3957)
                     /locus_tag="ACJJDL_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7573572.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3960..5396)
                     /locus_tag="ACJJDL_000824"
     CDS             complement(3960..5396)
                     /locus_tag="ACJJDL_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7573573.1"
                     /translation="MENSLIIGLALAVLLVLLVMRAKQGKKTPKRKSQGVGNTQGQPP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQYADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(5616..6398)
                     /gene="bioC"
                     /locus_tag="ACJJDL_000825"
     CDS             complement(5616..6398)
                     /gene="bioC"
                     /locus_tag="ACJJDL_000825"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HGG7573574.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVRLTYHPLFFIARYSAAGRQ"
     gene            complement(6386..7033)
                     /locus_tag="ACJJDL_000826"
     CDS             complement(6386..7033)
                     /locus_tag="ACJJDL_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HGG7573575.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFDEIHQELIALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(7043..8185)
                     /gene="bioF"
                     /locus_tag="ACJJDL_000827"
     CDS             complement(7043..8185)
                     /gene="bioF"
                     /locus_tag="ACJJDL_000827"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HGG7573576.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENCKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFSRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAVCL"
     gene            8408..9484
                     /locus_tag="ACJJDL_000828"
     CDS             8408..9484
                     /locus_tag="ACJJDL_000828"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HGG7573577.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(9691..11157)
                     /locus_tag="ACJJDL_000829"
     CDS             complement(9691..11157)
                     /locus_tag="ACJJDL_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HGG7573578.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFIGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(11355..12278)
                     /gene="speB"
                     /locus_tag="ACJJDL_000830"
     CDS             complement(11355..12278)
                     /gene="speB"
                     /locus_tag="ACJJDL_000830"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HGG7573579.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGIIDPAHSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(12377..14269)
                     /gene="speA"
                     /locus_tag="ACJJDL_000831"
     CDS             complement(12377..14269)
                     /gene="speA"
                     /locus_tag="ACJJDL_000831"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HGG7573580.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(14436..14720)
                     /locus_tag="ACJJDL_000832"
     CDS             complement(14436..14720)
                     /locus_tag="ACJJDL_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HGG7573581.1"
                     /translation="MKKLLLAAVVSLSAATAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(14871..16679)
                     /gene="aspS"
                     /locus_tag="ACJJDL_000833"
     CDS             complement(14871..16679)
                     /gene="aspS"
                     /locus_tag="ACJJDL_000833"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HGG7573582.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(16737..17438)
                     /locus_tag="ACJJDL_000834"
     CDS             complement(16737..17438)
                     /locus_tag="ACJJDL_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HGG7573583.1"
                     /translation="MTEPEAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(17581..18729)
                     /locus_tag="ACJJDL_000835"
     CDS             complement(17581..18729)
                     /locus_tag="ACJJDL_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HGG7573584.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(18890..19153)
                     /gene="rpsT"
                     /locus_tag="ACJJDL_000836"
     CDS             complement(18890..19153)
                     /gene="rpsT"
                     /locus_tag="ACJJDL_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HGG7573585.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            19456..20598
                     /locus_tag="ACJJDL_000837"
     CDS             19456..20598
                     /locus_tag="ACJJDL_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HGG7573586.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5361 a         5277 c         4803 g         5224 t
ORIGIN      
        1 ttaattgctc agaaagaatt tgaagaattt gttaataacg taaaagagta cgatatttta
       61 gagagtttct cttatttctt aaataagaga gtcgcacata atatttggaa gatttatttt
      121 tctgatgaat ctgttatttt tataagaaaa tcagaagaga acggaaaaac tgttcatgaa
      181 ttcgtttatc aagagtacac cgatagttct gattttaatt ctatgttcga gtaattctta
      241 ttctgaacct gtaagattag aaagatcaca aattaaattt caatcaagta ataatttaaa
      301 atcaagtggt tttaaattag attcaagttc taagagtttt gccaaattca tagaagcggc
      361 aaattttgag cacatcccta cgggcgcaaa agcccgaatc aacgccaaaa taaccgccag
      421 cgtttcccgc gccggcgtat tggcgggggt cggcaaactt gcccgcttag gcgcgaaatt
      481 cagcacaagg gcggttccct atgtcggaac agccctttta gcccacgacg tatacgaaac
      541 tttcaaagaa gacatacagg cacgaggcta ccaatacgac cccgaaaccg acaaatttgc
      601 aaaggtctca ggctaagtgc gcctgttgcc gcctaaaagg taacccggat gcctgattat
      661 cgggtatccg gggaggatta agggggtatt tgggtagaat tagggagtga ttggtagcgg
      721 aaatagacga aaacctgtgt ttgggtttcg gctgtcggga gggaaaggaa ttttgcaaag
      781 gtctcaatta gtatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt
      841 acaaatagta cggaaccgat tcactcggtg cttcagcacc ttagagaatc gttctctttg
      901 agctaaggcg agccaatgcc gtactggttt ttgttaatcc actataaaat cgagtttatc
      961 ctagctgtcc aggacagccc ctattttttc ataaccatca cgaaaggaat tttgcaaaga
     1021 ttttattcca tctcaaaaca atcatctcaa aaatgcgttt ctgaccgccg gtaaaacaaa
     1081 accctctaag aaaatactta gagggttttg aaatttggct ccccgacctg ggctcgaacc
     1141 agggacctgc ggattaacag tccgtcgctc taccgactga gctatcgggg aacaagcgcg
     1201 aataataaaa cagaaatacc gaacgtgtca atataaattg acaatcgatt gcactttatc
     1261 tgcaagcccg caatctttat atgttatatg gcttccgcaa tatgccttgc cgcacgtttg
     1321 gcatccaata ggattaaacc aagtctgccg gtttcttttg ccaccagcac caacacggca
     1381 tctttacccg cctgacttaa aaggatatag cctgattttc ctttaatcat cacttgttcc
     1441 aattccccgc aggcgagttc ctgcaccgag cgactcccca aagcaagcaa agtggcagaa
     1501 atcgccccta ccctgtccga attcaaatgt gaaggaagca ttgtcgccat cggcaatccg
     1561 tcggttgaga taacggcaga cgcgataata tccgtagatg tattgtttaa atcttcaagg
     1621 attgaaatca ataattgctg cataacccct cctctctccc aagttttacg cgcggttgct
     1681 gtaacggcgg tataaaatcc ttaccaaagt aacaaatgcc tctttgccca aatcgggaat
     1741 gccgccgata accaaaataa atttggttga accgatatac aatgggaaaa atgtcaattc
     1801 gctctgaccg gaaggatcgc aaacgcccca agcgttattg ttgatataca ggttgttctt
     1861 aatcagcagc cggtatttct tttccatctg tgcgacttct gccgccaaca accccaactc
     1921 ttccgccgcc tcatgatgga aattggcgtt ggcaagatac agaccgttcc gatcgaccaa
     1981 taacgcctta ccgctgccgg acaattgttc catcagcaac ggcaattgct cgtccgacaa
     2041 attgatgccg tctgaatgac cgttttcatc gccatagagg aattcgagtt tttgcaaacg
     2101 gtacaacagg ttcaaagcgg tatcgatgtc ggcggtgtcc gcccaagtaa gcagcttctc
     2161 actgctgacc atttcgtccg catctgcttt caacaggctg tgcaacaaag ttttaccggc
     2221 actgggggca tcgctggata cggcataaaa tgcaccggca ggagtcaggc ggggatataa
     2281 atttgcttgt agtgaaagtg ttgattccat attaaacctc cagtcccgga tcaatagaaa
     2341 ataacattgc gctaaccaat tgttttacgt catcttcctt acgggcatca atttcaaaaa
     2401 ccggaacatt aagattatgt tttgcaagat atttgtgata cacgtcgata ccgggctgag
     2461 agcgtatatc catcttggta ataccgacaa cgacgggtgc cttctccagc agccctcgaa
     2521 acgaatgtaa aaagaattcc aaatctttca acggattggt tcgggcatta tctaaaagca
     2581 agaccaaacc catactgcct tggcttaaga tttcccacat aaagttgaac cgttcctgac
     2641 cgggcgtacc atataaatgg actttggtat cctcatccaa gctgatggcc ccgtagtcca
     2701 tcgccactgt cgtattcctt ttcctatcca aagtcatatc ggatgcggaa gcatcggtct
     2761 gaacgagtgc ttcgtccgaa atagccgcaa tggcagtggt tttccctacg ccgacaggtc
     2821 ctgtgaaaat aattttattt tctctcatct ctccgcctct tagctgccca acagtttttt
     2881 catcagcctt tgcagaaggc cgcgcgactg ggattgggat ggtgttgtga ttttttccgc
     2941 ttttttcatc atttcactat cagaggcaga atcggctccg atatttattt tatccgccat
     3001 atcggagtat gcctgttgtg aaaccgtttt taaatctacc gacaaaaacc cggttgtata
     3061 ggttgccgca agataattca gaatatcatt gaggtttaaa ggcatcactt tatacaacac
     3121 gttaaggttg acggatgcct tggtcagaaa tgccgacaag cgtatcgacc ccggcacatt
     3181 tgccaaccgg gtcaggtttg gccaagattt caacgtaaac ggagtatcgg gagaaatcgg
     3241 ataaatcaac ctgccctgcg ctgtccaaat ggaaaactgc cacatacagg acataatgcc
     3301 tactttagcc ttttcgcgcc attgcgggtt atcgggaaca gtcttgcagc tgacctgcaa
     3361 attttcgtct ttgcacaatt cttcgagttt ttgcacactt tctgtcagca aaacccgttg
     3421 tatcgagggg aaaacaataa ggaccggctt atttccatgc aagatagcga tgtcctgcct
     3481 gttcttttcc gcaaaccgca acgcccccaa taatccttta ttcgggttaa actggcgtat
     3541 cgtaaccgta cgctgcacat tcccgttatt tttcgccgac cggtctgcgg gtgcaataaa
     3601 cgatttccca taaacattct cgccctgcaa caatttgcgg agcataggaa acaatgtttc
     3661 aaaccgaatc ggtttgggca ggtagggaac ttcagaatcg ggaactttct ccgaacagac
     3721 ggcgacgggt atatccttat aacgctcggc aagctctttc caaagttcaa aaccgccctc
     3781 ggcatcggta tccgccaaaa ccaaatcggg cacggcactg ccgtctgaag gggatactgt
     3841 ttcataacgg gtggtattgt gcattttgaa tgccattttg aaaacggatt cctgctgcgc
     3901 cgtcatcccc gccaacatta cgcgtactgt tttaattttc ggcagttgaa cttccatttt
     3961 tattttccgt accgttttat ttttttaata ttttgattca tacgctgcag cagccggctc
     4021 atcagcataa cgacctcttc aggaagcctg tccgcacgtt ccctcaatac ccttaaaaac
     4081 tgccccaacc tatcccaatc ttcagtacgt tcataaatat cgatcaacgt aatataaagc
     4141 tgggactcgt cgggatattt caataccgcc tgctccaaca catccattgc cgcttcaatc
     4201 tgaccataca tcagcaacga ctctacttcc ttaaccgcat cgtctgccgg agacgaaccg
     4261 gtgttgatca acgaagaatc ttgaagcacc aaatcccgat gttgcgattt gaatttctgt
     4321 atatttttcg gcagataccc gtgccccata ccgatgtctt tgatttgccg gtcgttcggc
     4381 cctttttcca aatcatcgaa aacctcatgg taacccaggc tgtaccccca ccccagcatc
     4441 cgctctttaa cctgcctgcc gtagttgccc aacgtttggt aaagtttcca caaatgtccg
     4501 gcaaaacggt ctatgtccgc gtattggtaa tcgagtttca acgcatcgat aatcaggttt
     4561 gcaggttttt cggaagtttg gatggcacgg tcgtattgtt tcgatgccgt ttcatagctg
     4621 actttgtctt taaggatttt cgcaccttga tcggcacgga ccaaaccggc aatcgcaccg
     4681 atttcctctt gactgattcc ggacacgtct tttttgcccc gcacaatcgg gatgcgcttg
     4741 atttcttcgg cttcataagc cttaccgccg gcatccggcg ggggcgatgc ggaagctgcc
     4801 gtcgcagaac cgccttccgc acgtttttca atctcctgag taccccatcc caaaccttct
     4861 tccgccaaga cgcggatacg caaatggttt gaatcgcgct gtaatgcctg ttcgatatat
     4921 tttgccaaaa gttcggaagg aatcagtttg ccgtattttt gcagattgtc tgccaaaaca
     4981 tcgacatccc ccacttcgag attgatatcg agcagctcgc ggataaggtt ttcaggtttc
     5041 gcttcaccat ccggaatgcc gtccagatag gcagccaaag attcggcagc cttgccctga
     5101 taaccgaatt gcttataaac ctgatactcc gtaagcggat cgacttcttg cgcggatacg
     5161 gcggcggatg cggtctcggc actttcgttc caagaccagt cgggttgcgt gccgtctgaa
     5221 accgattgtc caatctgatc gacccagtcc gaatcattgc ttccgggcgg ctgcccctgc
     5281 gtattgccga caccttggga tttgcgcttc ggtgttttct taccctgctt cgcacgcata
     5341 accaaaagca ccagcaatac cgccagtgcc agaccgataa ttaatgagtt ttccaaagga
     5401 tactcccgat accgtaacga gcggatagct gaccgcctgc aacggccatt gtccgctttt
     5461 attattaacg atttactgaa atagacttgt aagttttaaa tcataccata atttaacgtt
     5521 taacaatatg ccttctgcac aagcctcgcc atattacctt ttacccacat cagtatcaat
     5581 acccgatata aaaataactt tgcccataag ctgccttatt gcctgcccgc cgcagagtag
     5641 cgcgcgataa aaaataacgg atgataagtc aggcgcactt tgcccgacgg catactgaac
     5701 gccgacaagt aatcgccaat aaatccattg agattttttc ttgtccaatt tttttggttc
     5761 gtggctgtta cgcctgtata tttaaggtgt ttgagtacat ctaacggcgt atcaaagtct
     5821 agtattacct taaaatcctc acaccataaa agctcaaaat ctttggctaa ccaagtctgc
     5881 cattgggata aagtcgggta atttaagcct atatttgtaa tttggcggac ttcttttaaa
     5941 ttgtctttgc caaaggttgc aaccgccaat aatccgtttg ctttcaagcc tgttttgcaa
     6001 tgggcgataa aagcgtcggg ttgatgaaac cattgcacgg cagatgcgct tgcgattaag
     6061 tcaaattgtc gttgaaaagg aaagttttcc gcatcgccgc aataaaaatc aaaggattgc
     6121 ggcagttttt cagccagttg gggctgcaca tcgcacaaat cattaaataa ccaataattc
     6181 gctgaaatct gtttttgcag caaggcactc aacattcctg agccgcagcc caattccaac
     6241 acgttttcca atggcatatc cggcaaataa tcttgcaaat gcgccattag attaatcgtc
     6301 attttttgtt ggattaaggc gtgccggtca taatcgttta atgctttttg gaaagcctgc
     6361 cgaatgcgcg atttatttat ggcagtcagt gattccatag tgccgaccaa tgggtgaatc
     6421 ttgaaaacag gtaatgtccg ccgtcaattt cccgaacggt gcaacgcggt gtccaatatc
     6481 ggtgctgatt ggcaggcata aaaattttat cgcccgatcc gaccaaggca tttgtccagc
     6541 gaatcaaatc tgcgcgccta tcttgcccga tcatcgcaaa aagtgcgata agttcttgat
     6601 gaatttcgtc aaacggacgg gcgggaaatt gttggtaatc ttcaaaagat gctttatcgc
     6661 cacacattct gcgttcaaat tttaaacggg tgttttccgt gaggttctcc aatgtgcctt
     6721 taaaaacggc gcaagggata ccgaaattat catcgcaagg caaacctgtg ccattcactg
     6781 ccgttgcgga ttttaatctt attccttgca atgccctctc tgccgcccaa acgcccattg
     6841 accacgccac caaacggatg tgccgatagg cggaaaaatc aaaatccaaa tttaaatctt
     6901 gataatcata gcaaatcaat aaatcgtgat tttccggcaa aatcaaatga tttacagcat
     6961 cgggcggcgt tccccaacct gcaaaataca ggattaaatg tccgccttga tgattgtaaa
     7021 attttgtttt catatcatat ccttacaggc acaccgcaaa ctgccgcact tcatccgttg
     7081 tcatatctgc cgttaaagac aggcggattc tggatgtgtt tttgggtact gtcggtggtc
     7141 tgatgggcag gcaataataa ccctgccttt gcaggtattc cgctttggca agggtggctt
     7201 cattcccgcc taaaatatag gggacgatac aggtttggct cggcattatt tgcgtccgat
     7261 gcgccacttc ccgccgtaaa aatgcgctta actgctcaag atggcttctt tcttttgaga
     7321 attgcggcaa tcgttcaaaa ataaaataag tccaagccac attaaacggc ggcaatgcgg
     7381 ttgaaaaaat caatgggcgc atttgattaa tcaaacattc tttcaatact tggttgcaga
     7441 cggcatacgc ccccaccgag gctaaggctt taccgaaagt gccgaccaat aaatcaatct
     7501 cggcaatcaa attatcccgt tcggcaatcc ccaatccgtt ttgcccataa acaccgattg
     7561 cgtgggcttc atccacataa agataagtat tgggaaactg tttttttaat tggacaagct
     7621 gtttcaaatc cgccacatcg ccgtccatac tgaaaacaga ttcggtaacg ataaaagtgc
     7681 ggtcaaattt tccgacgttt ttttcaagca gatttttcaa atgttcataa tcattatgac
     7741 gataacggga aaacgcacac cggctcaaac ggatgccgtc aatcatactg gcgtgaacaa
     7801 atttatctgc caaaatcaaa cttttcgtcg tcgtcaaagc aggcaaaata ccgagattgg
     7861 cgtgatagcc gctgttgaac aataacgcgc tttcccgttg gaaacgttgt gcgacaagct
     7921 cttccaaatc ggtataaata ggaaagttgc ccgttaataa acgcgatgaa gaactggtaa
     7981 aagagggaaa attaccgccg tattgctgca aaaaagaccg gcgcaagttt tcatctgatg
     8041 ccaaacccaa ataatcatta gacgacatat tcagcatttt gcagttttcc cgcgtaatat
     8101 accgcccttg atgaatcaaa tccggaatcg aacgatattg gttttgcgcg ccgagttgtt
     8161 caagctgttg tttaaaaacc ttcattatga tgtaaatatt cctgagttaa agcctgaacc
     8221 aacccagcat caaacaatca agtaatgccc ttttaataaa aaccgttttg ccgccgacct
     8281 ttgccacacc cctgccttca taatccaagg cggaaatttc cgcgacattt gtttccgttg
     8341 ccattaccca atccgtccgc actgtaccga agcgcatatt ttcgcacaaa ttggtacggt
     8401 ttcaggtatg atttgccgaa aacctatcgg acacacacca tattttgata tgaataaaac
     8461 aatctgccgc actgccgcac tattgataag cggtttttca tacgcaaaca ccgtcattcc
     8521 cgatgtctcc cccgtcgcac aaggtcaaca tgtcttcatt aacatccctc agcaacgcct
     8581 gttcctctac accgacggca aactgaccaa ggtttatccc gttgcagtag gtcgggcgat
     8641 gacgcaaacc aatctaggcg aacataaaat cggtgcgaaa gcctataacc ctgtttggta
     8701 catccccaaa tccatacaga aagaacgcgg cgacggcgta aaaaccatag ccgccggccc
     8761 ggacaaccct ttggggccgg tttttgtccg cttaggcgac cccaaactcg gtttgggcat
     8821 acacgggacc aatgcgccgg ccagcgtccc cggggttcgg agtcacggct gcgtccgcat
     8881 gaaatcgccc gacgcgctcg agtttgccaa aaccatcgcc agcggctcgc ccgcctccgt
     8941 catctatcaa atggcggggc tcaatgaaga tgcggatcgc aacctgtggc ttgccgcctt
     9001 ccgcgaccct tacggtaaga acaaccttga catcgcctct ctgaaaaaaa gtattgcgca
     9061 atgggcaaaa acacagggta aaaccatcgc gcccgagaaa gtcgatgctg tactcaaaga
     9121 ccgcaccgga tcggccgtct gcctgacctg cggcaaaaac ggcaagatga agatgccgct
     9181 caaatcgctg gcgtggatac agggttcttc ctcatacagc caagctgaag tcattgaaca
     9241 aactgaggaa accaactctg ccgaaatatc cgagacacgc acgcccgaag tgcctgatgt
     9301 acacacgccc gaggcacaac cgcatttaaa tacccaatcc gacggcacgc cgactgccta
     9361 taccgaaccg gctgccgatt catcgccgca agtagaaaca cctgatcagg ctgcttccga
     9421 gccggttgat gtattatttt caatagatgt gatacggcag ggaaatttgc gtttaggtaa
     9481 ttgaataacc ttctgattat ttaatgctta tgtttatcag aagttgatag gcggtttggt
     9541 ttttgtttgg cttttcctac accgccgcct gccgctttct gcaacattca agcgcacaaa
     9601 tatgccatct gaaggcttta gacggcatat ttcacgataa tagtcgccca atcaaataaa
     9661 cacagattgg aaatttattt tatttttccc ttaccaatac cccagaactt tccaccaaat
     9721 gctgccgata acgaaaaaaa tcagaaaatt gaccacgctc atgataaaac ccgccttcca
     9781 ccattctccc attgtggtgt agcccgaacc gaaaatcaca ggcgaagtac cggtcgcata
     9841 atgagtgagg gtcatcataa tgttggatgc ggccgccatc atcagcgcgg tcggcatcgc
     9901 cggggcattc agtgaaacgg cagcagcgaa aaatgcgccg aacatagcgg taatatgtgc
     9961 agtagtactg gcaaacatat aatgcgcata catataagca agcacgagga ttacgcccgc
    10021 agccgtgccg ctaacgccca aaccgccgac actttccgcc aacactccgg agaaccattt
    10081 aatcagtccg agtttattta aaaatgcggc catcataatc aatgcgccaa accaaataat
    10141 cgtatcccac gcgctttttt ctttcaaaac atcgtcccaa gtcaatacac cggaaagcaa
    10201 aagcaggctt aatccgataa atgcggtggc ggtggcgttg atactaaaag cgtgattgcc
    10261 ggtaataagg gcgggaacat ctgcccacaa cagcaacaag ataccgaaaa tgaccgccat
    10321 aatgatttcg tctgccgaca ttttacccat ctccctcaga cggtctttgg caaattgaac
    10381 ggcattgggc gtttctttaa tttcaggcgg atacaaaaaa tataaaatca aaggcataac
    10441 gaaaaaggcg ataacgccgg gaacagccat tgcccacgcc cacgcccccc aagaaagacg
    10501 gaaactactg cctaaatttt cggcaatcaa gttgacgatt aaagggttgg gggcagttgc
    10561 agtaataaac atagccgacg aaatgggatt ggaatgatag ttgaccaaag ccaaatattt
    10621 acccatcttg ccttctgtgc cttttgcggg attggagccg taactgccgg caatcgactg
    10681 cataatcgga tgtataatgc cgccgccgcg cgcggtattg gaaggggtaa cgggagccag
    10741 cagcagttcg gaaagagcga gactgtaacc gatgcccagc gtttttcttc caaaaacggc
    10801 gataaacaaa tatccgatac gcatccccag ccctgttttg agcaaaccgc gcgaaatcat
    10861 aactgcgatg gcaatcagcc aaatcaacgg attggcgaac gcactcaacg catcgctcat
    10921 cgccgcaccc ggtttgtcgg cggttacgcc ggttactgcg accaacccga cggcaataat
    10981 cgacagcgca cccaacggca tggccttgcc gataatggcg gcaatcacac cgataaacat
    11041 ggccagcagc gtccaagcct gaggcttgac cccgtcgggt acgggcagtg ccaaaaccaa
    11101 ggcgcacaat actgcggcaa tggcgagggg tatcggtttg aaacccaatt tcatcatatt
    11161 gacctccgta aaaaagaccg tcccgaaaaa tcggaaaaat aatatttaac taattgtttt
    11221 ataagatata ttccgatatt tcaccgtctt tccgatatgc ggctccgggc aacttttgtt
    11281 tcagtatttg aattttcatt agactgaata cgccgtttga acggcacggc gaaaacccgg
    11341 gggatgccgg acgttcagtc ctttttcgca ccttgaaggt aaagcatttc caaggcaatt
    11401 gtggcaccgg ccaaagcggt aatgtcggat tggtcgtaag agggggcaac ttctacaaca
    11461 tccataccga cgatgtcgag atccgtcagc ccacgtagga tttttaatgc cctgtcgctg
    11521 ctcaagccgc cgcatacggg cgtaccggtc ccaggggcga acgacgggtc caggcagtcg
    11581 atgtcgaaag tcaggtaaac gggcatattg ccgacggttt ctttgatttt acggacggtc
    11641 tcttcaacac tgtcttcatt gacttggggg gcggtcaaca cagtaaaagg caatttttta
    11701 ctgtgttcgg tacgtatgcc gatttgcacg gaatgtgccg gatcgatgat gccttccttg
    11761 ggggcggtat aaaacatcgt accgtggtcg tattcgctgc cgttgtcgta ggtgtcggtg
    11821 tgcgcgtcaa aatgaatcag tgcgagtttg ccgaaatagc gggcgtgggc gcgcaacaac
    11881 ggtagggtaa tgaaatggtc gccgcccaaa ctcaaacagc gtttgccgga agaaagtaat
    11941 ttgccggcgt gcgcttccat tttttcgaca aaatccctgc tgtcgccaaa agaaaaaacc
    12001 aagtcgccgc aatcaataat gttcaggcgt tcgcgcacat caaatgtcca tggaaacctg
    12061 cggtgctccc aagcgaggtt gacggaggcg cgccggatgg cttcaggacc gaaacgcgcg
    12121 ccggaacgcc ctgaaaccgc catatcataa ggcacgccgg taataaccca atcggcatga
    12181 ctttcatacg gcataaaatt aagcggcagg cgcaaaaacc cgaaattatt ggaaacgagg
    12241 gagttgtcgg tttgtcctgc cagtgtgctg tattgcatcg taatgattcc ttgtaattgg
    12301 tttcaatcgg tcgtgatgat tggtgtttga gtaagaaaat cgggcttcag acgacatatc
    12361 cgatgccttg atgcgtctat tcgtcttcca aataggtata accattaagc cccgcttcga
    12421 gttcttttaa gaaagacata gcctgcgagg caggaaggtc tgaatgttcg atttgttcgc
    12481 gatagcgttt catcagctct ttcggatctt gataaacgta ttcgagcata tcggcaacgg
    12541 tgtttccttc atcgtaatcg atgacggtaa attgtccgtc ttcccctaca acaacatcgg
    12601 cagtggcagt gtcgccgaaa agattgtgca tattgccgag tatttcctga tatgctccca
    12661 ccataaaaaa gcctaaaagc ggcggctctt cttcgggata atcaggcata ggcatcgtac
    12721 cggcgatgcc gtcgccgtcg atgtagtggt caatcgtacc gtctgaatcg caggtaatgt
    12781 ccaacaacac ggcgcggcgc gcaatcggtt cattcaaacc ggtaatggga caaacaggga
    12841 aaagttgatc tatgccccaa gcatcgggca aagattggaa gagtgagaaa ttgacataca
    12901 gcttatcggc aaaacgttct tgcaattcgt caataatggt tcggtgagac cggtgttttt
    12961 cattaaacaa ttcgccgact tcatgacaga tatttaaata cagttgctcc gcccacgcac
    13021 gttgcgccaa actcaacagc ccgacattat actgattatg cacatcggca agatcaaact
    13081 gcccttcgtg tatccagctg cgtaaggaac gtttttcccg cgaggcggaa atatccgtcc
    13141 aagtttccca catactgtgc aacacacgcg gtgcttcggg cgatggcgca tccagccggc
    13201 gcggtttgta acgttcaacg cctataacat tagcaaccaa aacggcgtga tgtgcggtaa
    13261 tgccgcgccc gctctcggta atgattgtcg gatgcggcag cccgtgttcg agacaagcct
    13321 ggctgatgcc ccatacgact gtggcggcat attcgttgag gctgtaatta acggaacaat
    13381 ccgattgtgt gcggtttcct tcgtaatcca cgccaagccc gccgcctaca tcaaaacagc
    13441 ggatatttac ccccagtttg tgcaactcaa cataaaaccg agccgattcg tgtacacctg
    13501 tggcaacatc acggatgttc ccaagctgcg agcccaaatg gaaatgcaaa agctgcaggc
    13561 aatccagcct gtttttttgt ttcaaaatat cgaccagttg caaaacttgg gaagccgaca
    13621 agccgaattt tgatttttcc ccacccgaag actgccattt tcccgaacct tgggaagcca
    13681 gtctggcgcg cacacccaaa cggggcttga tgccgagttt ttccgcctct tccaatacca
    13741 tttgtatttc ggacagcttc tcaatcacca aataaacctg atgccccagt ttttcgccca
    13801 tcaaggcgaa acggatatat tcacggtctt tatagccgtt gcagacgatt aatgtttgcc
    13861 gggtgccggc gtgtgccaaa accgccatca gttcggcttt agaaccagct tccaaaccat
    13921 gcggttgtcc gcttgacata agcgattcga tgacgcggcg gtgttggttg accttgatag
    13981 ggtaaaccaa acaataaccg cccttatagc cgcactcttc ccgtgccgtc tgaaaggcgc
    14041 ggttgatgtc gcggaggcgg tgttcgagga tttgcggaaa acaaaacaaa acaggcaggc
    14101 gcgcctgatg tttttgttgc acggcttcag tcagtttttg cagtgaaaca gtttgattgt
    14161 gttgcgaggg attggggcgg acgatgattt cgccggaatc gtcaacatca taataaccta
    14221 taccccaatg attaatgttg cacacttcac ggatggtaag gataggcata ataaacctgc
    14281 tccgtctgtc gtgttgaaaa ggaatgatta taacaaatca gcgtgaaatg tcattttttt
    14341 aataagaaaa gcctgcctca tacctgatga ggaacaggca aaatgccgtc tgaacgcttc
    14401 agacggcatt ttggttcagc ttgccatcaa aggagtcagc gatcgagctg ctctttgatg
    14461 attttcaggt cggggtaaga caacacgatg tcgtattcgc ggccgtcttt ataggcttcc
    14521 acttccagca caggcttacc ccaatggtcg tcggcatcga catcgtgaac ctgataacca
    14581 cgctgttcca acattttcac ggcttttgtg cggttttgtt caaaatgggg atcgccgtaa
    14641 atctgacgct cggcagaatc gccggcaaat gcggttgcgg cactcaggga aacaacggcg
    14701 gccaataaca gttttttcat tttcagtcct ttttttatcg gttgattgaa caagatgtgt
    14761 ttttcaatac cgccattaaa acacagcaaa attaggtttg aattagaggg aagtcaagaa
    14821 gcgtaaatgc cgtctgaaaa aaacagagcc gtcaaacggc tctgttttcc ttatgcttct
    14881 ttggtttcag ccgccttttg acgcaggcgc aagctcaatt cgcgcaactg cttgtcgtcc
    14941 acgctgttgg gcgcgttggt cagcaggcat tgagcacgtt gtgttttcgg gaaggcaatc
    15001 acgtcgcgga tggattcggc tccggtcatc agcgttacca gacggtcgag gccgaatgca
    15061 aggccgccgt gaggaggcgc accgaatttc aggttgtcca agaggaagcc gaatttctct
    15121 tgttgctctt cagggctgat tttcagcgcg gcaaacactt tctcttgcac gtctgcgcgg
    15181 tggatacgga tagagccgcc gccgatttcc cagccgttca ataccatatc gtaggcgcgt
    15241 gccaaacaat ttgccgggtc ggaaaccatc aggtcttcat gaccttcttt tggcgcagta
    15301 aacggatggt gtacggcaac gtagcggtcg gcttcttcgt cgtattcgaa cattgggaag
    15361 tcgacaaccc acaaaggttt ccattcgtct gtgaaatagc cgttttccgc gccgtgttcc
    15421 aagccgactt tgatacgcaa tgcgccgatg gcttcgttta cgactttggt tttgtctgca
    15481 ccgaagaaga taatatcgcc gttttgtgcg ccggtacgcg cgatgatttc cttcagggca
    15541 ttctcagaca ggaattttac gattggagat tgcaggccgc tgtcttcgcc gttggagagg
    15601 ttgcccacat catttacttt gatgtatgcc agacctttcg caccgtagat gccgacaaat
    15661 ttggtgtatt cgtcgatttc tttgcggctg aatttcgcgc cgttcggtac acgcagagcg
    15721 actacgcggc cgcctttcat atctgccgcg ccacggaaga ctttgaattc ttccgttttc
    15781 atcaggtcgg tcaactcggt gaatttcaag ttgatacgca tgtccggttt gtcagagccg
    15841 tagtagaaca tggcttcaga gtaaggcatg cgtgggaagt cgcccaagtc cacgcccagc
    15901 gcgtctttga agacttgttt cgccatacct tcggtgatgt ccatgatttc atcctcgttt
    15961 aagaacgagg tttccaagtc gatttgggta aattcaggct gacggtcggc acgcaggtct
    16021 tcgtcgcgga agcacttggt gatttggtag taacggtcga aacccgccac catcaacagt
    16081 tgtttgaata attgcggcga ttgcggtagc gcgaaaaact cgcccggatg aacgcggctc
    16141 ggcacgaggt agtcgcgcgc gccttcaggc gtggagcggg tcagcatcgg ggtttcaatg
    16201 tcgatgaaac cttgcgcgtc caagtagcgg cgaacgccca tagccacttg gtaacgcagg
    16261 cgcaggttgc gctgcatcac cggacggcgc aggtcgataa cgcggttggt caggcgaacg
    16321 ttttcgctga tgttttcatc gtcgatttgg aacggaggcg tagcggcggc gtttaatact
    16381 tcgatttctt tggcaagaat ttcgattttg ccggaaatca ttttgtcgtt ggttgtacct
    16441 tcgggacggt tgcgtacgcg gccggtaatg ctcaaaacgt attcgttgcg ggcggaatcg
    16501 gcagcagcaa acgcttccgg agtgtcgggg tcaatcacga cttggacgat gccttcgcgg
    16561 tcgcgcaggt cgataaaaat cacaccgccg tggtcgcgtc ggcggtgtac ccagcctttg
    16621 acggttacgg tttggtctaa gtattgctcg ctgatcaggc cgcaatagtt ggtacgcata
    16681 aattcacctt ttattgattt aaactgaaaa cagaaaatgc cgtctgaacg gcggctttat
    16741 tgttgttcgg gcaaatccgc cttttcagac ggcataggtc ctgccaatgt tttgacgggc
    16801 aggtcgtcag ggatgaccat acccagcgaa atcacatatt tcaatgcttc gtccacgctc
    16861 atatcgagtt cgcgcacatc gcttttcttt accataatat agtaaccgcc ggtcggattc
    16921 ggcgtggtcg gaacatacac ggaaagataa tcgccgtcct tcggcaatgc ggccttaacc
    16981 gcattcgaca cctgaccgga cacgaatgcg attgtccaaa tacccgattg gggaaacggc
    17041 acgagtactg gtgttttaaa cgaacggctg ctgtcggaca gcagcgattc ggatactttt
    17101 ttcacactcg aatagatgga cttcacaact ggaatccgcc ccaacaggct gtcccacgcg
    17161 gcaagaatct gccggcccaa tacgtttgcg gcaaacaatc cggttacaaa caatacagca
    17221 atggcaacga taacgcccag ccccgggata ttgaagccca aaacatattg cggccgccat
    17281 tgcttcggca gcaggttgac gagctgatcg gacgcggaaa cgatatagga aaccacccaa
    17341 accgttaccg caatcggcag ccagaccaaa atgcccgtaa tcagatattt ttttaacgcc
    17401 ttggcagctt taccgccttc ggcctcaggt tccgtcatct tgcttgattc cgacaaagtc
    17461 cgtacaaacc gcacattata cgcgtttgcc cggattcaaa cgaaattttt atcccgcccc
    17521 gccaaaccgc cagcggcttc agacggcacg gcaacttgat ataccgtctg aacacgcggt
    17581 tcagatgccg tccaagtcgt tgaacatcaa cccgataccg ataccgttct gcttgtggtt
    17641 gtagtcgatc aggctctcgc cgtaaccgtg gaatccgcgt accacgcctt tgagtttgcc
    17701 cttaatcgga aacgtgtagg cggcttcaat cgcgccgtag cccgttttgg ggttgtagcg
    17761 caatacggaa tacacattct gcctgtcgtt caggcggtac tgcagcttca cgtcgccata
    17821 ccccatatag tcggcaatat cgggattgtc gtttttatcg ccgctctgat cgaacgcacg
    17881 cacccacacg cgcggaatca ccgtcaattt gccccattcc atgcctgcca tggcgtaaat
    17941 cctgttccac gaacgcgatt cgggacggct ctgtccgttg gactggtgga caaaacccgc
    18001 accgagcata cgcagcctgc cgccgaacgg caaatccgcc ttcacaggct gggtcaggaa
    18061 aatttcaggt ttgtaatccg tattgcggaa cggcgcggat ttcctgcctt ggttgtaaat
    18121 ctgccaatcg gatctttggg tgtagccgaa ccacagatcc gcgcgggttt taaacaaatc
    18181 ttcggcaatt ttgcttttga acgaaacctg caatttggtt tccgcacgtt tctgctgtcc
    18241 gaatttttcc tgtacagtcg taccgcgcgt cggcgaaccc ggggcatagt tgggcgaatt
    18301 gttgtaccag agcggcataa ggtacatcgg attgtgttcg cgtacgccca acagcccgcg
    18361 caaatcgttt ttgtccaagt cgtacatcag gctcaaaggc gtatagatgt cggcggtttc
    18421 gcccgcactg tcggcaggaa gcgcatcccc gcctttttca acaacaatga ccgcctcgcc
    18481 cttatccagg ctgctgcgga cggtttccgt cagattgagt acggctttcg actcctgccc
    18541 ttcctgccct gccgaagacg gaagctgtgc cgcaaaaatc ctgtcgtaac acgccaaacg
    18601 cgtaacattg tccgtcaaag cggcgcattg cagcgcggtc tctccaaaag cggatgccat
    18661 cggcaacagt cctgtcaaaa gaatatagcg catattccgt gtattcatct ccgcccccat
    18721 tgtcggcata ttggttttca aacggcattt tatagcggat tcggataaaa aaccgcaccc
    18781 tttccgccat ttcgggattt tgcccccgca atacagaaaa ccccgaaacc gtcaggcttc
    18841 agggttttcc gcttatcgcg tatcaaccgc cttggcggtt ttgcaaaaat caagccagtg
    18901 cttttacttt tgcagacaga cggcttttgt ggcgtgccgc tttgtttttg tggaacacgc
    18961 ccttgtcggc gatgcggtcg atgactttga cagactcttg gtaaaccgct tgtgcggcag
    19021 ctttatcgcc tgcttcgact gctttcaata cttttttcac tgcagtgcgg aatgcggtac
    19081 gcaggctagc gttgtgggcg cgttgtttga cggactggcg ggcacgtttg cgtgcttgtg
    19141 cgctgtttgc catattggaa tctcctggaa gaaaaataaa ttctgtaaac gcgcaatttt
    19201 aaagggggtt tacattatat gcaagccttt tctctctatc cgcccgtcgg acaccctgac
    19261 agcgcaaaaa aacggcaaaa tcgtgcggac gttttccccc tcttttgaaa acaaggtaat
    19321 tttttaggaa aatcaggtca atatcgcttt gagtttgcac aaatttactt tacaatgccc
    19381 aaaccttgcg ccggggtgtt tatggggcgt ggggttttct ttttttccaa cctctttcat
    19441 caggaatctg cccgtatgaa aaaatccgta ttagccgttt tggccgcgct gtctctggca
    19501 gcctgcggcg gcagcgaaaa aaacgccgtg caacctcaag cagacgctgc gtctgctgcc
    19561 aatgccgaag ccgctgccac cgatactctg aacatctaca actggtcgaa ctatgttgac
    19621 gagagtacgg tcgaagactt taaaaaagcc aacaatctga agctgactta cgacttgtac
    19681 gaaaacaatg aaacgctgga agccaaaatg ctgaccggca aatccggtta cgatttggtt
    19741 gtgccgggca tcgccttcct gccgcgccaa atcgaggcgg gcgcgtatca aaaagtcaac
    19801 aaagacctga ttcccaacta taaaaacatc gatcccgaac tcttgaaaat gctggaaacc
    19861 gccgacccgg gcaaccagta tgccgtcccc tatttctccg gcgtgaacac gattgcgatt
    19921 acggcgaaag gcaaagagct tttgggcggc aagctgcccg aaaacggctg ggatttgctg
    19981 ttcaaacccg aatacaccca caagctgaaa tcctgcggca tcgccctgtg ggacacccca
    20041 agcgaaatgt tcccgatttt gctgaactac ttgggcaaag accccaaagg ctcgaatcct
    20101 gaagatttga aggcagcggc ggaagtgttg aagtctatcc gtccggatgt caaacgtttc
    20161 agcccgtcca tcattgacga attggcgcgc ggcgatatct gcttggcggc aggtaacggc
    20221 ggcgatttga acttggcgaa agcacgttcc gaagaagtga aaaacaacgt cggcatcgaa
    20281 gtgctgaatc cgaaaggcat gggcttctgg attgagtctt ggctgattcc cgccgatgcg
    20341 aaaaacgtcg ccaatgccca caaatacatc aactacacgc tcgaccccga aatcgcggcg
    20401 aaaaacggca tcgccgtaac cttcgccccc gccagcaaac cggcgcgcga aaaaatgcct
    20461 gccgaactgg taaacacccg ttccatcttc ccgaacgagc aggatatgaa agacggtttc
    20521 gtgatgccgc aaatgagcac ggatgcgaaa aaactgtcgg tcagcctgtg gcagaaaatc
    20581 aaagtcggca ccaactgatt tgaagcatta aaaatgccgt ccgaacatcg ttcggacggc
    20641 attttatatt ggattgaaat agaaa
//
LOCUS       DBBZYD010000028        20463 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.028, whole genome shotgun sequence.
ACCESSION   DBBZYD010000028 DBBZYD010000000
VERSION     DBBZYD010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20463
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.028"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..251
                     /locus_tag="ACJJDL_000838"
     CDS             <1..251
                     /locus_tag="ACJJDL_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HGG7573587.1"
                     /translation="SVTVANGVITAQMASSGVNKEIQGKKLSLWAKRQNGSVKWFCGQ
                     PVTRDNAKDDVAAATGTDTDKIDTKHLPSTCRDAASAS"
     gene            807..1730
                     /gene="lpxC"
                     /locus_tag="ACJJDL_000839"
     CDS             807..1730
                     /gene="lpxC"
                     /locus_tag="ACJJDL_000839"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HGG7573588.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
     gene            2772..4220
                     /gene="gnd"
                     /locus_tag="ACJJDL_000840"
     CDS             2772..4220
                     /gene="gnd"
                     /locus_tag="ACJJDL_000840"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HGG7573589.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FTAWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGTDPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            4283..5554
                     /gene="waaA"
                     /locus_tag="ACJJDL_000841"
     CDS             4283..5554
                     /gene="waaA"
                     /locus_tag="ACJJDL_000841"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HGG7573590.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRKSGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVRVESADAWREAVEKTLSSEGGGMQMQ
                     AHVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            5595..6044
                     /locus_tag="ACJJDL_000842"
     CDS             5595..6044
                     /locus_tag="ACJJDL_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HGG7573591.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARRE
                     VEKAMSYRAVRVMPFVVGLLFASGVVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            6077..7051
                     /locus_tag="ACJJDL_000843"
     CDS             6077..7051
                     /locus_tag="ACJJDL_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HGG7573592.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNLGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVQQFEWILYLFGAFLLYTG
                     IHMMKPEGDEKEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            7120..7195
                     /locus_tag="ACJJDL_000844"
     tRNA            7120..7195
                     /locus_tag="ACJJDL_000844"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7153..7155,aa:Lys,seq:ttt)
     gene            7415..8668
                     /gene="murA"
                     /locus_tag="ACJJDL_000845"
     CDS             7415..8668
                     /gene="murA"
                     /locus_tag="ACJJDL_000845"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HGG7573593.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGA
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
     gene            8749..9927
                     /locus_tag="ACJJDL_000846"
     CDS             8749..9927
                     /locus_tag="ACJJDL_000846"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HGG7573594.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMIHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACVGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADEEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(9994..10242)
                     /locus_tag="ACJJDL_000847"
     CDS             complement(9994..10242)
                     /locus_tag="ACJJDL_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HGG7573595.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(10342..11259)
                     /gene="ftsX"
                     /locus_tag="ACJJDL_000848"
     CDS             complement(10342..11259)
                     /gene="ftsX"
                     /locus_tag="ACJJDL_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HGG7573596.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPGEIV
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(11256..11906)
                     /gene="ftsE"
                     /locus_tag="ACJJDL_000849"
     CDS             complement(11256..11906)
                     /gene="ftsE"
                     /locus_tag="ACJJDL_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HGG7573597.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(11903..12094)
                     /locus_tag="ACJJDL_000850"
     CDS             complement(11903..12094)
                     /locus_tag="ACJJDL_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573598.1"
                     /translation="MPSESASDGIFPARPSVSAKLIHYLKTGGIFIIGTVLPIVQTAY
                     PCGRNRPKRYAAHSLQDLL"
     gene            complement(12102..12584)
                     /locus_tag="ACJJDL_000851"
     CDS             complement(12102..12584)
                     /locus_tag="ACJJDL_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HGG7573599.1"
                     /translation="MKYLNLAAITLGATFAAHTASADELAGWKDGAAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            12708..13061
                     /gene="arsC"
                     /locus_tag="ACJJDL_000852"
     CDS             12708..13061
                     /gene="arsC"
                     /locus_tag="ACJJDL_000852"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HGG7573600.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLESARGMMRVKDDLYKELGLDNPDLDNNALLRTIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            13058..13714
                     /locus_tag="ACJJDL_000853"
     CDS             13058..13714
                     /locus_tag="ACJJDL_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HGG7573601.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFTSSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            13830..15224
                     /gene="gltX"
                     /locus_tag="ACJJDL_000854"
     CDS             13830..15224
                     /gene="gltX"
                     /locus_tag="ACJJDL_000854"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HGG7573602.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNAGNVVYQTRRFDRYKEVIAELLEKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGATLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNGKLAELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNTLADECLYFYVKQTPTEADVQKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            15245..15640
                     /locus_tag="ACJJDL_000855"
     CDS             15245..15640
                     /locus_tag="ACJJDL_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573603.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDYAWNAVYGAGGTKASGN"
     gene            15644..16135
                     /locus_tag="ACJJDL_000856"
     CDS             15644..16135
                     /locus_tag="ACJJDL_000856"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7573604.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDFGTLLGSAAVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(16258..18852)
                     /gene="mutS"
                     /locus_tag="ACJJDL_000857"
     CDS             complement(16258..18852)
                     /gene="mutS"
                     /locus_tag="ACJJDL_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HGG7573605.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCTTHMGSRLLALWLHHPLRNRAHIRARQEAVTALDSQYEPL
                     QCRLKNIADIERIAARIAVGNARPRDLAALRDSLFALSEIDLSTNGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAALNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            19296..20300
                     /gene="gap"
                     /locus_tag="ACJJDL_000858"
     CDS             19296..20300
                     /gene="gap"
                     /locus_tag="ACJJDL_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG7573606.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPSGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTSDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
BASE COUNT         4733 a         5025 c         5788 g         4917 t
ORIGIN      
        1 aaagcgttac agtcgcaaac ggcgtcatta ccgcccaaat ggcttcaagc ggcgtaaaca
       61 aagaaatcca aggcaaaaaa ctctccctgt gggccaagcg tcaaaacggt tcggtaaaat
      121 ggttctgcgg acagccggtt acgcgcgaca acgccaaaga cgacgttgcc gccgccaccg
      181 gcaccgacac cgacaaaatc gacaccaagc acctgccgtc aacctgccgc gatgcggcat
      241 ctgccagcta aggtaaatta taccataaat tttaaataaa tcaagcggta agtgattttc
      301 cacggccact cggattaatc cgggtggctt cattttaagg gtttgcaagg caggcggggg
      361 cgtccgtttt ggtgaaaata atatatcgat tgcgcttcaa ggctctgcgc gtacctcatt
      421 gtcgcccgtt taaacacggg gtttatctga caggcgcgca atccgccctc tcatttaccg
      481 aacaagcgga ctggattccc gcctactcgg gaatgacgaa ttttaggttg ctgtttttgg
      541 ttttctgttt tggttttatg tccttgtggg aatgacggtt tacgcgaaaa tgccgtccga
      601 aaggttttcg gacggcattt tttgcgtttt tcaggagggg ggcggcttcg tcgccttgtc
      661 ttgatttttg ttaatccact atacattttt atgcggctta cgtattgaaa acggatacat
      721 tggcaaatac tatggaaaaa catagcttgt ttttccggtt ttatcgtatc attccccaac
      781 ttaccccatt gataaggaag cggtttatgc tgcaaagaac tttggcgaaa tccatcagcg
      841 ttaccggagt cgggctgcat tcgggcgaac gcgtcgcact gaccctgcac cccgcgcctg
      901 aaaacagcgg gatttccttc cgacgcaccg atttggacgg cgagatgggc gaacaaatca
      961 agctgacccc ttatttgatc aacgataccc gcctttcatc caccatcgtt accgacaaag
     1021 gcgtgcgcgt cggcacgatc gaacacatta tgtccgcgct gtccgcctac ggtatcgaca
     1081 acgcactgat tgagctgaac gcgcccgaaa tcccgattat ggacggctcc agcctgccgt
     1141 ttatttacct tttgcaagat gcgggcgtgg tcgatcaaaa ggcgcaaaag cgttttttga
     1201 aaatcctcaa gcctgtcgaa atcaaagaag cgggcaaatg ggtgcgcttt acgccgtatg
     1261 acggctttaa ggtaacgctg accatcgaat tcgaccatcc ggttttcaac cgcagctcgc
     1321 ccacttttga aattgatttc gccggcaaat cctacatcga cgaaatcgcg cgcgcgcgca
     1381 ctttcggctt tatgcacgaa gtggaaatga tgcgcgccca caatctgggt ttgggcggca
     1441 atttgaacaa cgccatcgtg attgacgaca cggatgtcct gaatcctgaa ggcttgcgct
     1501 atcccgatga gtttgtgcgc cacaaaatcc ttgatgccat cggtgatttg tatatcgtcg
     1561 gacatccgat tgtcggcgcg tttgaaggct acaaatcggg acacgccatc aacaacgcac
     1621 tcttgcgcgc ggttttggca gacgaaacgg cttacgaccg ggtggaattt gccgacagcg
     1681 atgatttgcc cgacgcattt cacgagctga acatcagaac ttgtggataa cgctttctat
     1741 tttttccggt aaattcctaa aacttaaaat ttcatcattc ctacaaaaac agaaaaccaa
     1801 aatcagaaac ctaaaatccc gtcattccca cgaaagtggg aatccagaat ctcggacttt
     1861 cagataatct ttgaatatta ctgttgttct aaggtctaga ttcccgcctg cgcgggaatg
     1921 acgaatccat ccgcacggaa acctacatcc cgtcattccc acgaaagtgg gaatccagaa
     1981 tcccggactt tcagataatc tttgaatatt gctgttgttc taaggtctag attcccgcct
     2041 gcgcgggaat gacggcggag cggtttctgt tttttccgat aaatgccgca atctcaaatc
     2101 ccgtcattcc cacgaaagtg ggaatgacgg aatgtaggtt cgtgggaatg acgcggtaca
     2161 ggtttccgtt acgtatcccc atccgaaagt ttatttatac acaagcaatc caaagttatc
     2221 tgactgaaat attgtgagat ttacccgcaa atctcatttt ttccaccact tatacacaaa
     2281 ttcggatgcg cactctgccg atatgcagaa ataagacatt cgtgccgaca cctgaccatt
     2341 tccacaagtt ccaaacacac tttcctctca aacctccaca gtattccggt tcttaaagac
     2401 atcggcagcc attcggtaaa gaaaagcgga atgccatctg cacaacaagc aaactatcca
     2461 caaaacttat tccccataaa aaacaatcca caggtatgca caaaagggaa tccgccttac
     2521 cgacacccta aaaaaaggta atcctgatga tttttaaaat aaaaaaaagt tacccacaga
     2581 aaatttctcc tatcaatata atcatcgttt ttttatttaa tttttatatt ttatttataa
     2641 gccttcaggg aaacgcacgg taaagcgtaa aggcatcttt tcaaaaaatt aaaaagttaa
     2701 ggattgttaa acaagtgtaa atcaggtaga gttgcggtcg ataaattaaa tctataacgg
     2761 agcttcctgc aatgaaaggc gatattggcg taatcggttt ggcggttatg gggcaaaacc
     2821 tgattttgaa tatgaacgat tgcggattta aggtggttgc ctacaaccga acaatcggta
     2881 aggtggacga atttttaaac ggcgcggcta agggaacgga tattgtcggc gcgtattccc
     2941 tgcaagactt ggtcgataag ctggcaaaac cgagaaaaat catgatgatg gttcgcgcag
     3001 gttcggtcgt cgacgacttt atcgaacaac tgcttccgtt gttggaagaa ggcgacatca
     3061 ttatcgacgg cggcaatgcc aattaccccg acacgacacg gcggacacat taccttgccg
     3121 aaaaagggat tttgtttgtc ggggcgggcg tatccggcgg cgaagaaggc gcgcggcacg
     3181 gcccgtccat tatgccgggc ggggataagc gcgcttggga agccgtcaaa ccgatttttc
     3241 aggcgattgc cgccaaaacg ccgcagggcg aaccgtgttg tgactgggtc ggcagggacg
     3301 gcgcgggaca ttttgtcaaa atggtgcata acggtatcga atacggcgat atgcagttga
     3361 tttgcgaagc gtaccagttt atgaaagacg gtttgggact gtcctacgac gaaatgcacc
     3421 gcgtgtttac cgcgtggaac aaaaccgagc tggattctta tctgattgaa atcacagcgg
     3481 caattttggg ctataaagac gaaggcggcg aaccgctggt cgagaaaatc ctcgatacgg
     3541 cagggcaaaa aggcacgggc aaatggacgg gcatcaatgc tttggatttg ggtattccgt
     3601 tgacgctgat ttccgaagcg gtattcgccc gctgcgtttc gtcgttcaaa gaacagcgcg
     3661 tgcagaccgg caagctgttc gcccgaaccg ttacgcccgt cgaaggcggc aaacaagaat
     3721 gggttgaggc gttgagacag gccctgcttg catccaaaat catttcctac gcacaaggct
     3781 ttatgctgat ccgcgaagcg ggcgaaagct acggctggga tttggactac ggcaacactg
     3841 cgctgctgtg gcgcgagggg tgcatcattc gcagcgcatt cttaagcaat atccgcgatg
     3901 cctatgaaaa caatcccgat ttggtgttct tgggtacgga tccgtatttc aaaaatattt
     3961 tggaaaactg cctgccggcg tggcgcaagg tggttgccaa ggcggtcgaa tgcggcatcc
     4021 ctatgccctg catggcttcg gcgattacgt tcttggacgg ctacacgacc gaacgtctgc
     4081 ctgccaacct cttgcaggca cagcgcgact acttcggcgc gcacacttac gaacgcaccg
     4141 acaaaccgcg cggcgagttt ttccatacca actggacggg caagggcgga gataccgctt
     4201 cgacaaccta cgatatttga ttccgttgcc gaaatgccgt ccgaaccgtt cggacggcat
     4261 ttgttttgca ggaaatagaa agatgttcca atggctttat gatgtattgt ggctgcttgc
     4321 gccgatatgg atacggcgtt atttggacaa acgctccgga agtgccccgg catatcgggc
     4381 gcatcgggac gagcgtttcg gcaagccgta tccgaatccc gttaccggag cggtttggat
     4441 acacgccgtt tcggtcgggg aaacgcgtgc cgcccaacct ttgatacgcg agttgcggca
     4501 gcgttttccc gatgcgccgc tgctgatgac gcagatgacc ccgacgggac gggaaaccgc
     4561 gcaagttctg tttcctgatg cacaatgccg ctatcttccg tatgacaaaa aaacgtgggt
     4621 acggcagttt ttgcgcgaac accgcccgat gttcggcatt ttgatggaaa ccgaaatctg
     4681 gcccaatctg atgacggagt gccggaaatc gggcgttccg ctgtttttgg cgaatgcgcg
     4741 gctgtcggaa aaatcgctaa acggttatct gaaagtccgc cgcctgatcc gtcctgccgc
     4801 cgcttcgctg acgggttgtc tggcgcagac ggaggcggat gcggcgcggt tggcgaaatt
     4861 gggcgcggca tccgtgcagg tgtgcggcaa taccaaatac gacctaatgc cgtcggaaca
     4921 gatgaaaacg ctggcggggc agtttgaaaa acgcatcgga ggcaggccgg ttgccgtgtg
     4981 cggcagcacg cgcgtttatc ggggtgaaga cgaggcggaa aaactgctgg cggcgtggca
     5041 acaatatcgc ggcgatgcgc tgctggtcgt cgtgccgcgc catcccgagc attttcagac
     5101 ggtatttgaa acggcaaaac gcttcgggtt taaggttcag cggcgcagcg acggtttgcc
     5161 ggtcgaacct gatacgcagg tgtggatagg cgacagtatg ggcgagctgt atgcgtatta
     5221 cctgtgcgcc gatgtcgctt ttgtcggcgg cagtctggtc gattcgggct gtcagaacat
     5281 tatcgaaccg ctttcctgcg gcgttccgac gatattcggc ttttcaacct acaatttttc
     5341 cgaagcctgc cggcacgcct tggcatcggg ggcggcggtt cgggttgagt cggcggacgc
     5401 gtggcgggaa gccgttgaaa aaaccttatc gtccgagggg ggcggaatgc agatgcaggc
     5461 gcacgtggac ggctttatcg cacaacatcg cggagcgggc gcgagaatcg ccgaggcggt
     5521 acgggaagcg gtatgcggac atcggggacg atagtgatac aatccgtatc cgagttttcc
     5581 ggttggagca tcgtatgagt atttatgccg tcgcgcacat cgtccacctg tattgcgcca
     5641 ttgcctttgt cggcggcgtg ttttttgaag tgctggtttt gtccgtcctg catacgggac
     5701 gggtgtcgtg cgaggcgcgg cgcgaagtgg aaaaggcaat gtcttaccgc gccgtcaggg
     5761 tgatgccgtt tgtggtcgga ctgctgttcg ccagcggcgt cgtgatggcg gcaaaccgct
     5821 atctttctat attgggcgaa ccgtttgcca cttccttcgg tacgatgctg acgctgaaaa
     5881 tcctgttggc gttcagcgtg ttggcgcact tcgccatcgc cgtcgtcaaa atggcgcgtt
     5941 ccacactgac cgtcggctgg tcgaaataca tacacgccgt cgtctttacc catatgctgc
     6001 tgattgtctt tttggcaaaa gcgatgtttt atatcagctg gtaacacaat tacatttcaa
     6061 atcaggagat tgaaccatga cagaatatcc cggcatcggg tcgccgttgt tttacggcgt
     6121 tttttttgcg gcagtgctgg tcatgattgc cttggatatg ttttcgctga agaaaaacgg
     6181 cagccataaa gtcggcgtca aagaagcctt ggcatggagc ggcttgtggg ttgccgtatc
     6241 ctgcctgttc gcgggctggc tgtatttcga actcgccggc aatctcggct acggcgcggc
     6301 agtcgcaaaa gaaaaagtat tggaattctt taccggctac attttggaaa aatcgttggc
     6361 agtcgacaat attttcgtgt tcctgatgat attcggctac ttcaaagtcg caccacagtt
     6421 tcagcaccgc gtgctgctgt acggcgtatt gggcgcattg gtattgcgca ctgtcatgat
     6481 tttcgtcggc gcggcactgg ttcagcagtt tgagtggatt ctgtatctgt ttggcgcgtt
     6541 cctgctctat actggtatac acatgatgaa gcccgaaggc gatgagaaag aggatttggc
     6601 aaacagcagg ctgctgaatg ccgtcaagaa agtcgttccg gtcggcacgg aatttcacgg
     6661 cgagaaattt tttaccgtcg aaaacggcaa aaaaatcgcc acgccgctgt ttttggtgct
     6721 ggtcatgatt gaattgagcg atgtcgtgtt tgccgtggac agtattcccg ccgtctttgc
     6781 tgttaccacc gatccgttta tcgtgctgac ctccaatatt ttcgccattt tgggtttgcg
     6841 ggcgatgtat ttcctgctgg cggatgtggc ggaacgcttt atcttcctga aatacggctt
     6901 ggcattcgtg ttgggtttta tcggtgtgaa aatgctggta atgcattggg tgcatatccc
     6961 gatttccgtt tcactgtcgg tcgtgttcgg cgcgttgggt gcatcgatac tgacctcgtt
     7021 aatttatacg aaaaaacagc ctgataaata aaatgccgtc tcaacgccga caaaatggtt
     7081 gacagcatca ggcttgatgt atagaatttc gagcttgtcg ggtcgttagc tcagtcggta
     7141 gagcagcgga cttttaatcc gttggtcgag cgttcgaatc gctcacgacc caccagataa
     7201 aacaaaaaaa gctgagtttt caaaactcgg ctttttttgt tttccgacaa tccttgttcg
     7261 gaaagcgcgg catttcgtca aattctttgg tgcggcttcc gtatttttcc cgaaaatccc
     7321 ttataattcc gcctctgcaa ccttcatcgg gtgatgcttt atgcgttgtc ccgagaattg
     7381 aaatattaca agtacccacc aggaaagaac aaacgtggac aaactgaaaa tctccgcaaa
     7441 cggcccactc aacggggaaa taacggtctc gggcgcgaaa aacgcggcat tgccgctgat
     7501 gtgcgcgggt ttgctgacat cgggtacgtt gcgcctgaaa aacgtcccta tgctggcaga
     7561 tgtgaaaacc acgcaaaagc tgcttcaggg gatgggcgcg cgcgtcctga ccgacaatat
     7621 cagcgaattt gaaattaacg gcggcacggt aaacaatacc tgcgcccctt acgaattggt
     7681 acggacgatg cgcgcctcga ttttggtgct gggcccgacg ctggcgcgtt tcggcgaggc
     7741 gcaagtcagc ctgccgggcg gctgcgccat cggttcgcgc cccgtcgatc agcatttgaa
     7801 aggcttggaa gcgatgggtg ctgagattgt tatcgaacac ggttacgtca aagccaaagg
     7861 caaactcaaa ggtacgcgcg tggcgatgga tgtcgttacc gtcggcggca cggaaaacct
     7921 gctgatggcg gcgacgctgg cggaaggtac gacggttttg gaaaactgcg ccattgagcc
     7981 tgaagtggtc gatttggcgg aatgcctggt caaaatgggc gcgaaaatca gcggcatcgg
     8041 tacgtccaca atgattgtgg aaggtgcgga cgagctgcac ggctgcgaac acagcgtcgt
     8101 ccccgaccgg attgaggcgg ggacgttcct gtgcgcggtg gcgataaccg gtggcagggt
     8161 ggttttgcgg aatgccgcgc cgaaaacgat ggaagtggtg ttggacaaac tggttgaggc
     8221 aggtgcggtg attgaggcgg gcgacgattg gatcgccatc gatatgcggc agcgtccgaa
     8281 ggcggtggac atccgcacgg tcgtccaccc cggcttcccc acggatatgc aggcgcagtt
     8341 tatggcattg aatgccgtgg cggagggaag ctgccgcgtg gtggaaacga tttttgaaaa
     8401 ccgctttatg cacgtccccg agttgaaccg gatgggggcg aacattacaa ccgagggcaa
     8461 tacggcattt gtgcagggtg tggaacggct ttccggcgca gtcgtcaagg cgacggattt
     8521 gcgtgcgtcc gcaagcctcg ttatcgccgg tttggcggcg cgcggcgaaa ccgtggtcga
     8581 acagatttac cacttggatc gcggttatga aaatattgaa aaaaaactcg gcagcgtcgg
     8641 cgcgaaaatc gagcgcgtat ccggctgatc gggttgcgat gccgtctgaa gccttcagac
     8701 ggcatcaatt gtttctgtat cgcaaacact gattgaaaag gactgattat ggcattttta
     8761 aaactgaccg aacaaaacgt gcagggcaaa accgtcctca tccgcgccga tatgaacgtg
     8821 ccgttcaaag acggcaaaat cagcgacgac acccgtatcc gcgcctcgct cgcgtccatc
     8881 caatactgca tggacaacgg cgcatccgtt atcgtgatga tccacttggg tcgcccgact
     8941 gaaggcgagt tccaccccga agacgacgtt gcgcccgttg ccgcgcattt gggcggtctg
     9001 ttgggcaaag acgtgaaagt attgaacgac tggcgcgaaa acaaaccggc tttgaacgcg
     9061 ggcgatgtcg tgatgctgca aaacgtgcgt atcaacaaag gcgagaagaa aaacgatttg
     9121 gaactgggta aagcctacgc ttctttgtgc gacgtgttcg tcaatgacgc gttcggcacc
     9181 gcgcaccgcg cccaagcttc gaccgaagcc gtcgctcaag ccgcgcccgt tgcctgcgtc
     9241 ggcgtattga tggcgggcga actcgacgct ttgggcaaag ccctgaaaca gcccgcgcgc
     9301 ccgatggttg ccatcgttgc cggcagcaaa gtgtccacca agctgaccat cctcgaatcg
     9361 ctggcggaca aagtcgacca actcatcgtc ggcggcggta tcgccaacac cttcctgttg
     9421 gcggaaggta aagccatcgg caaatctttg gcggaacacg atttggtgga agaatccaaa
     9481 aaaattatgg caaaaatggc ggccaaaggc ggttctgtgc cgctgccgac cgatgtcgtc
     9541 gttgccaaag cctttgccgc tgatgaggaa gcggtggtaa aagacattgc cgacgttgcc
     9601 gaagacgaga tgattttgga catcggcccg aaatctgccg ccgcgcttgc cgatttgctt
     9661 aaagccgccg gtacggtcgt atggaacggg ccggtcggcg tgtttgagtt tgaccagttc
     9721 gcaggcggta cgaaagccct tgccgaagcc attgcccaaa gcaaagcgtt ctcgattgcg
     9781 ggcggcggcg acacgctggc ggcgattgcc aaattcggcg ttaccgaaca aatcggctac
     9841 atctccaccg gaggcggtgc gttccttgag ttcttggaag gcaaagagct gcctgccgta
     9901 gctgctttgg aaaaacgcgg cgcgtaagcg gtttgatata aaaaatgccg tctgaaacgt
     9961 tgtgctgttt ctgacggcat ttttgtgtgg cggttattgt gctttggctg cccattccgc
    10021 cggagtggcg gcaaccgaaa tggaaagtgc gtgcagttcg ttactttcca gttgggcttt
    10081 gagtccgtct ttaatcaggc ggtggcgcgc gaggcgtgcc ttgccttcaa attctgatga
    10141 aacgatgacg gcgaaaaaat ggtgtccgtc gccttctact tcgatatgtt cgcattttgc
    10201 cacgccttca atcatggctt ttacttgttc cgaggtcagc atggtaggtt ccttgttgga
    10261 aaaatgcgcc attatactgg caaattgaaa tgccgtctga aaacgggttc ggacggcatt
    10321 tttgacggtg ttttattttt tttatttttt ggctttgaag ccgagcaggt gctgggtggt
    10381 ggcaagccac gcgccgaata cgcccaacgc gatgacgaag ccgaacacca gcacgatttc
    10441 tcccgggtag aagaaacgcc agccgatgtt caagccgtag ggtttgaaaa tggcatcgac
    10501 caatgggcgc acggcggaga gcagccaacc gcaaagcccc aagctgacgg cggcggaaag
    10561 gatgctctgc cacatggctt gataaaggaa tgggcggcgg ataaacgacg cgggcgcgcc
    10621 caagagtttg gtgatttcga tttcttcttt tcggctgagg atttgtaggc ggatggtgtt
    10681 gtgcgcgaca aggacgaacg ccatccccag cgtcagggaa agaaaccata aaattttgcg
    10741 gatgaactcg ttgatttggt acagcgtttg cacccattcg gtatccatag acgcggattc
    10801 gaccataggc agtttggtaa tgtctcggta gattgcctgc atttgggcgg gcgtggttgc
    10861 cgggtcgggg gtaacgataa agacatccgg cagggggttg ccgtcaagca tggaaatcag
    10921 attttggtcg agattggact gtaattcttc cagaccgtct tctttgccga tgaagcggat
    10981 gttgtcgagc cgtttgtcgc gcgccagcag gctgcgcacg gtatcgctgt cgctttgtgc
    11041 ggcggcggtt tccatataga ttgtgatttg cggcgactcg ttgagtttgc ccaacacgct
    11101 ttgcccgctt tggatgccca aatacataaa cagcggcagg gtcatggcga cggcgagcat
    11161 tatgagggta agcagtgtgc cgaaaggttg gcgcagaagc tgtttgagcg cggtgcgcgc
    11221 ggattcgacg tgcagcgaga ggtagtggat gatgctcatg cgagtcgtcc tttcgagagg
    11281 cgcaggatgc ggtgtccgta gtccgccatc agggtttcgt catgtgcggc gacgatgacg
    11341 gttgttcccg cttcgtggaa ggttttgaac aattccataa tatcgagcgc gtaggcgcgg
    11401 tcgaggttgg cggagggttc gtcggcaatc agcaggccgg gctggtgaac gacggcgcgg
    11461 gcgatgcaca ggcgttgttg ttcaccgccg gagagggtta cgggatcgtc caattctcgt
    11521 cctttcaggc cgactttttc gatggcgatg cgggcacgct cttcggcttt gcgcggcgga
    11581 tagccgataa tccgaagcgg caggatgacg ttttgcagga cgttgcggtc gtagaggatt
    11641 ttgtggtctt ggaacacgat gccgatgtgt tggcgcataa agccgatttg gttgtcggac
    11701 aatgtgccga ggtcctgccc gttaaacagg attttgcccc tgcttggttt ggtaatgccc
    11761 gaaatcagct tgaggacggt ggatttgccc gaaccggagt gtcccgcgat aaatatcatt
    11821 tcgcctttgt tgatttggaa gctgacgttt ttcagggctt caaaaccgcc gggataggtt
    11881 ttggaaactt gttcgaaacg gatcatagga ggtcctgtaa ggaatgggcg gcatatcgtt
    11941 tcgggcggtt gcgtccgcag ggatatgccg tctgaacaat aggtaagaca gtgccgatta
    12001 taaagattcc gcctgttttt agatagtgga taagtttggc ggataccgaa ggtcgggcgg
    12061 gaaaaatgcc gtctgaagcg gattcagacg gcatccggcg tttaacggca ttttgaatgg
    12121 gcgagtttga cggcttcggt caggcttttt tcgttcactt ccccggtaat ggtctgcctg
    12181 tatccgcatt tcggtgcttc gacgacggta aagggcagta cgccgacagt gtttccgtag
    12241 gttttcataa agtttcggct gttcgcccca gtgtaacgcc aaatcgggta agaaacaggg
    12301 gtttgcttga ggaagttgcc gatattgtcg gatgtgtcga gcgcgatgcc gaccatatcg
    12361 acgctgcctt ttttctgcgc tttgtaccat ttggacatgg caggcatctc ttttcggcac
    12421 ggaccgcacc aggtcgccca aaggttgacg atgcggacgg gggctttgag cgattgcagg
    12481 ctttgcgcgg caccgtcttt ccatccggcc agttcgtctg ccgaggcggt atgtgcggca
    12541 aatgtggcgc caagggtgat tgcggcaaga ttcaagtatt tcatcgtttt gtcctttgta
    12601 tgtcgattcg ggtattgtaa accgtttggt acggttgtag gcgggatatt gagtaaaacc
    12661 ctgtgtaagc cgataataag gggattgtcg agaagtaagg aaatgtcatg tctgaaatca
    12721 aaattttcca caatccgcgt tgcagcaaat cgcgtgccgc cttgtcccta ttggaagaac
    12781 gcggcattgc tgccgaagtg gtcaaatatt tggatacgcc gcccgacttg tccgaattga
    12841 aggatatttt caacaaattg ggcttggagt cggcgcgcgg gatgatgcgt gtgaaagatg
    12901 atttgtacaa ggaattgggt ttggacaacc ccgatttgga caataacgca ctgctgcgta
    12961 ccatcgccga tcatcccgcc ctgttggagc gtccgattgt tttggcaaac ggtaaggcgg
    13021 ctgtcggcag gccgttggaa aatatcgaag cggtattgtg aacaaacggc tgttttgcag
    13081 ccgcaacggc ttgcgctatt acctgttggg cggtttctgt ttgagtgttt ttccgctttt
    13141 gctggtgttt acctcatccg tttgggcggt ttatcggacg ggcgggcagg ttttgccgcc
    13201 gtatgtccgg gcggatgccg cgctggtgtt gggtgccgcc gcatgggaca aacgcccttc
    13261 ccctgttttt cgggaacgca tcaaccacgc catcgcgctt taccaaagcc gcagggtagg
    13321 caaaatcgtg tttacgggag ggcgaaccaa aaaaggctat atgaccgaag ccgaggtcgg
    13381 gcggcggtac gcgctcaaac agggggttcc ggcgcgcaac atcctgtttg aaaacacttc
    13441 gcgcaacact tatgaaaacc tgaacaacat ccgtccggtt ttgcgtgcca acggtattgc
    13501 cagcgtggtg attgtcagcg atccctacca tttggcgcgg gcggcggaaa tggcggagga
    13561 tttgggtgtc cgcgtttata tgtctgccac cccgaccacg cggtttgatg cgggaaataa
    13621 gaaaaaaatc tttatgctgc aagagggata tgcgttatcc ctctaccgtt tggaaaaatg
    13681 gggcagccgc tttttgggat ggctgtctga ttgaagcggt agaaaatgcc gtctgaaact
    13741 tatccgcagg cagggttcgg acggcatttt taatgcccaa gcacggtaaa aacagtaaaa
    13801 taagccgttt taaagatttt ggagccatca tgaccgtcaa aacccgtttc gcccccagcc
    13861 caaccggcta cctgcacatc ggcggcgtac gcaccgccct gttttcttgg gcgtttgccc
    13921 gccatcataa aggcgaattc ttattgcgca tcgaagacac cgacttggcg cgctctactg
    13981 ccgaatccgt caacatcatc ctcgacggca tgaaatgggt cggactcgat tacgacaacg
    14041 ccggcaacgt cgtgtaccaa acccgccgtt tcgaccgcta taaagaagtc atcgccgaac
    14101 ttttagaaaa aggcgatgcc tactactgct attgcagcaa agaagagttg gaagccatgc
    14161 gcgagaaagc cgaaaaagaa ggcacggcga cttacgaccg ccgctggcgg ccggaagcag
    14221 gcaaaaccct gcccgaaatc cctgccggcg tgcaacccgt cgtccgcttc aaaacgcctt
    14281 tggatggcgt aaccaagtgg acggacttgg tcaaaggcga aatctccatc cccaacgaag
    14341 cactcgacga cctgattatc gcccgcgccg acggcacgcc gacctacaac ttctgcgttg
    14401 tcgtggacga ctacgacatg ggcgttaccc acgttatccg gggcgacgac catgtgaaca
    14461 acaccccgaa acaaatcaac atcttaaaag ccatcggcgc taccctgcct gaatacggcc
    14521 acctgccgat gattcttaac gaacaaggca aaaaaatctc caaacgcagc ggcgataccg
    14581 ttgccattac cgatttcggc gcgatgggca tcctgcccga agccatgctc aactatctgg
    14641 cacgtttggg ctgggcgcac ggcgacgatg agttcttcac gatggaacaa tttatcgaat
    14701 ggtttgattt gaaagacgtt tctccatctc caagccgcat ggatttgaag aaactctact
    14761 ggatcaacgg cgaacacatc aaaatcacgc ccaacggcaa actcgccgaa ctcgtcaaac
    14821 cgcgtctcgc tctgcgcgat atccatgaaa ctgaaaaacc tgcattggaa gacgtgttgg
    14881 cactggtcaa agaccgcgcc caagacctga acacacttgc cgacgagtgc ctctacttct
    14941 acgtcaaaca aacgcctact gaagcggacg tgcagaaaca ctgggacgat gaagccgccg
    15001 cccgtatgct gcgctttgcc gaacgcctcg aagggctgga agactggaat gccgaagcca
    15061 tccacgacct cttcaaaccc ttctgcgacg aagaaggcat taaaatgggc aaactcggca
    15121 tgcccctgcg ccttgccgtc tgcggtacgg cgaaaacccc cagcgtcgat gctgtgttgg
    15181 cattaatcgg caaagaagaa gtgttgaaac gcatccgcgc ttaagttatc cacaggcgtg
    15241 ggcgatgccg tctgatgtcg gaatgcggct tcagacagca ttcaaacgga agttgaacat
    15301 gaaaaaaata ttgtattttc tgatgtttgt tttttctaca agcgtatggg ccggggatgc
    15361 ggaagacaat ctgctcagca tccaatccgg ctatcgtgcc ttactgcaaa aacaaaacaa
    15421 tctggacgga aaaatcatcg ggatgcagtc ggatttggaa gatgcgcgcc ggcgtttgca
    15481 gacggctcaa gcagacatcg cccgtttgga agcggaaatt cctgcagcaa tggcgcaaaa
    15541 agcccggcag gctgaagagc tgaggcaaat cggagtgcgt ttggactatg cttggaatgc
    15601 ggtttacggc gcagggggaa cgaaagcgtc ggggaattga ccgatgaatt ccctctttgt
    15661 ggacaatact gttttcatta cacggctgaa agccgggcat atcggcaggt tggttcaggc
    15721 gttgtttgag gagtggcacg gatttgaacc gtggtcttct gtggataaga ttcatgccta
    15781 ttacggcagg tgtttgaagg atgacgaact gccgctggca tttgcggctg tggatgattt
    15841 cggaaccctg ttgggttcgg ctgcggtcaa gcggcatgat atggaaagtt ttccacagta
    15901 tgaatattgg ttgggtgatg tctttgtttt acctgaatat cgcggaaaag gcattggcag
    15961 gaggctggtc gcccactgca taggcgcagc gcgttcgctg gggataaagt tcttgtatct
    16021 ttatacgcct gatgtgcaaa tattttatga atcattcggc tgggcggttg tcgggcgaca
    16081 tttccataac ggtgaatggg ttacggttat gcgtttggat atggataagg tttaagccga
    16141 atggacaaat gccgtctgag ctgttcggac ggcattttta tgtttggaaa cttcttgtca
    16201 gataatgttt atccacagat ttttccatat ggtttgatgc tgttccgaca acggaaatta
    16261 agatacggat ttgcacaaat ctttcagacg gtacagttct gacaatgctt cgcgcggggt
    16321 caggctgtcg ggatcgagtt tttccaaggc tgctgccaat ataccttcaa aatgtttttc
    16381 ctctgcttta tccacaaagt tgcccacatt cggttcatct cctttttcag acggcatggt
    16441 actgaaaata tccagttggg gacggttcgc ggcggcttgg ttttccagtc cgttcaaatg
    16501 cttttgggcg gatttcaatg cgcgtacagg caggccggcg agtttggcaa cggcgatgcc
    16561 gtagcttttt ccggcgggac cgggttggat ttggtgcaga aacacgatgt cctgtccctg
    16621 ttcgagcgcg gaaaggtgca tattgagtgc ggcggcgtgg gcttcgggca ggtaggtcag
    16681 ctcgaaatag tgggtggcaa acaggctgaa ggatttgttt ttttgcagca ggtgttcggc
    16741 aacggcgtgc gcgagggcga ggccgtcgaa agtggaagtg ccacgtccga cttcgtccat
    16801 taaaacaagg ctttgttcgg tggcgtgatg caggatgtag gcagtttcgc tcatttcgac
    16861 catgaaggtg gagcggttgg aggcgaggtc gtccgatgcg ccgatgcggg tgaagatttg
    16921 atcgatgggc ccgattgtgg cggcatcggc aggcacgaaa cagccggtgt gtgccaataa
    16981 aacaatcagc gcgacttggc gcatgtaggt ggatttgccg cccatattgg ggccggtgag
    17041 cagcatgagg cggtgtttgt ggtcaaggtc ggtgtggttg gcggtgaagt ggcgtacctg
    17101 ctgttcgaca acgggatggc ggccgttttc gatgtggata accggatagt cggcaaactc
    17161 ggggcggacg aagttccgct cttttgccaa ggctgaaaat gtggacaata cgtccagcgc
    17221 ggcggcggct ttggcggctt tttgaagctg cggcaatgcc gtctgaaggt ttttcaatac
    17281 gccgtcaaag agttgttttt ctaaggcgag ggcttgctct tgagcagtca gtactttgtc
    17341 ttcaaaggct ttcagttccg gcgtgatgaa gcgttcggcg tttttgaggg tttgccggcg
    17401 ttggtagtcg gcaggtgctt gttcggcttg ggttttggac aattcaatgt aaaagccgtg
    17461 aacgcggttg aactcgactt tgagtgtgga caaaccggta cgttcgcgtt ccttggcttc
    17521 caaatccagc aaaaattcgt cgccatggtt ttgaatgcgg cgcaattcgt ccagttcggg
    17581 atgaaaaccg tggttgatga cattgccgtc ttttagccag acggaaggtt cgggcaaaat
    17641 ggcttggcgg agctgttcgg ctgtggatag gttttccggg aaaacggctt tgagggtttc
    17701 caacaggctg ctgccgtttg tggacaagtc gatttctgac agggcaaaca ggctgtcgcg
    17761 cagggcggcg aggtcgcgcg ggcgggcgtt gccgacggcg atgcgggcag caatgcgttc
    17821 aatgtccgca atgtttttca gacggcattg gaggggttcg tattggctgt ccagcgcggt
    17881 tacagcttct tggcgggcgc ggatgtgggc gcggttgcgc aaagggtggt gcagccagag
    17941 agccaagagg cggctgccca tgtgggtggt gcaaaggtcg agcgtggaca tcagggtcgg
    18001 cgattttttg ccggagaggg tttgcgtgat ttcgagattg cggcgcgtgg cggcatccat
    18061 accgatatat tggctgtcgg tttcgagcga caggccgtcc aagtgttgcg gcatcaggtt
    18121 ttgcgtcagg cggatatagt tcaacagtgc acctgccgcg ccaatcgcaa cggcgtgttc
    18181 tttgccatcc aaaccgaagc cgcgcaaatc ctggcagccg aaatattccg tcagcagttt
    18241 ttcccccgcg tcggcggcaa actgccacgc gttcaggcgc gtaacacccg atgccgtctg
    18301 aagttgcggt gcgtttttac tgtcaggcaa cagaatttcc gccgcctgca ggcgcgccag
    18361 ttcgtcgtcc aatttatcca cagtcgtcag cttggttttg aattcgccgc tttgcagcga
    18421 tgcccacgcc aaaccgatgt attttttgtc gggggacacg gcaacgatgc ggttggtttc
    18481 cttgtcttcc agcaatgcgg aatcggttag cgtgccaggc gttacgatgc gcacgacttt
    18541 gcgttccacc ggccctttgc ctgcgccgac ttcgccgacc tgttcgcaaa tcgccacgct
    18601 tttgcccaac ttgaccaggc gcgccagata ttgttcggcg gcgtgaaacg gcacgcctgc
    18661 cattttaatc ggtacgccgt ccatctgccc gcgcgtggtc agggtaatat ccaaaagttt
    18721 tgccgcttct accgcatcgt cgaaaaacat ctcgtaaaaa tcgcccatac ggtaaaacac
    18781 cagtttgtcg gtatgttgcg ctttgatgcc gaggtattgc tgcatcattg gggaaacggc
    18841 ggatttggac atggggctgc cttatcatta ggaaaacggt attgtagcaa aaggttttgt
    18901 cttcgacgga atgagactga ccgtaagcct gtcaataaag ttgtggagac aagtaggaaa
    18961 acagcaaagt tatccacagg aatattatta agtcaaaaaa catccacgtt tatctgtcct
    19021 atacggcaag ccttaaactc aaacttattt gacgaaaagg taatgaaaat attggatatt
    19081 tgcaacttat acacaagcag atccgcaatc atcaaaatca tcattaaaat tttaaattca
    19141 aatattgatg gtaaaagttt tggaaatctg tgcaaacagt aaaattcatc tatatcaaat
    19201 aagcatcaag tagttagatg taatagtgga atgtaacttt atttcagaat acaatacaga
    19261 tattgaaatt tcgtttcaca gcttggagta tatacatgag cattaaagta gcgattaacg
    19321 gtttcggccg catcggccgc ctcgcattgc gtcaaattga aaaagcccac ggcatcgaag
    19381 tcgtcgctgt caacgacctg acccctgccg aaatgctgct gcaccttttc aaatacgaca
    19441 gcacgcaagg ccgtttccaa ggtactgccg aattaaaaga cgatgccatc gtggtaaacg
    19501 gcaaagaaat caaagttttc gccaatccga atcccgaaga attgccttgg ggcgagttgg
    19561 gtgtggatgt cgtcctcgaa tgtaccggct tctttaccaa taaaaccaaa gccgaagcac
    19621 acatcagggc cggcgcgcgc aaagtcgtga tttccgcacc cagcggcaat gatgtgaaaa
    19681 ccgtcgtata tggcgtgaac caagacattt tggacggcag cgaaaccgtt atctccgctg
    19741 cttcctgcac caccaactgc cttgccccga tggcggcagt cctgcaaaag gaattcggcg
    19801 tagtcgaagg cctgatgacc accatccacg cctacaccag cgaccaaaac acccttgacg
    19861 cgccgcaccg caaaggcgat ttgcgccgcg cccgcgccgc cgcgctcaac atcgtgccca
    19921 acagcaccgg cgccgccaag gccatcggtc tggttatccc tgaattgaac ggcaaactcg
    19981 acggctccgc ccaacgcgtc cctgttgcca ccggctcgct gaccgaattg gtttccgtcc
    20041 tcgaacgccc tgtaaccaaa gaagaaatca acgccgcgat gaaagcagcc gccagcgaat
    20101 cttacggcta caacgaagat caaatcgttt cttccgacgt tgtcggcatc gaatacggct
    20161 cgctcttcga tgcgacccaa acccgcgtga tgaccgtggg cggcaaacaa ttggtgaaaa
    20221 ccgttgcctg gtacgacaac gaaatgtcct acacctgcca actcgtccgc actttggaat
    20281 actttgcagg caaaatctaa ggcttgaaca aacctgtgga taagtaaatg ccgtctgaac
    20341 acattgcgtt cagacggcat tgtttatctg tatagtggat taaatttaaa ccagtacggc
    20401 gttacctcgc cttgccgtac tatttgtact gtctgcggct tcgttgcctt gtcctgattt
    20461 aaa
//
LOCUS       DBBZYD010000029        20321 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.029, whole genome shotgun sequence.
ACCESSION   DBBZYD010000029 DBBZYD010000000
VERSION     DBBZYD010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20321
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.029"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(491..919)
                     /locus_tag="ACJJDL_000859"
     CDS             complement(491..919)
                     /locus_tag="ACJJDL_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573607.1"
                     /translation="MFFQIACNSGNSYISLLKSMRFYIDNKECDYIFFRKAVNISDDF
                     IQSGFITPEGLITKNSNPKLFNQYSKMVSKNKCQYEMVTFLSDEMKNIIELLLNDDAY
                     IEFAYSEDFYVLPEIKIDKRTLKSLNFYIDFGVKYIINKI"
     gene            complement(996..1439)
                     /locus_tag="ACJJDL_000860"
     CDS             complement(996..1439)
                     /locus_tag="ACJJDL_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573608.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAAAPLVAIGILHAGRFLAQRWVTQRVAAQALSRGANVYARTSQQAR
                     AVANQAWGRQNVIRHGQKEIHSNYSHFQNSSQKIRGHAFYGNKHR"
     gene            complement(1482..2351)
                     /locus_tag="ACJJDL_000861"
     CDS             complement(1482..2351)
                     /locus_tag="ACJJDL_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HGG7573609.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNSKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLINPNISFAAN
                     DRISLTGGIQWLGTQPDRIDGKKETARNTSTYAHFGTGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            2515..3438
                     /locus_tag="ACJJDL_000862"
     CDS             2515..3438
                     /locus_tag="ACJJDL_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG7573610.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALALTRTDLPYPLDVVSRLVRGEKFFTTQEVEGV
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(3516..4157)
                     /locus_tag="ACJJDL_000863"
     CDS             complement(3516..4157)
                     /locus_tag="ACJJDL_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7573611.1"
                     /translation="MLKPETIHISGPAGILETIHIPSEQVSARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGNSEGTHDYGHGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTDRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(4212..5003)
                     /locus_tag="ACJJDL_000864"
     CDS             complement(4212..5003)
                     /locus_tag="ACJJDL_000864"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HGG7573612.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFESEKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFYL"
     gene            5169..5244
                     /locus_tag="ACJJDL_000865"
     tRNA            5169..5244
                     /locus_tag="ACJJDL_000865"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5202..5204,aa:Thr,seq:tgt)
     gene            5386..6177
                     /gene="panB"
                     /locus_tag="ACJJDL_000866"
     CDS             5386..6177
                     /gene="panB"
                     /locus_tag="ACJJDL_000866"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HGG7573613.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDVGVDVLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTESVSCPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTVKFVKNFMQGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            6167..6343
                     /locus_tag="ACJJDL_000867"
     CDS             6167..6343
                     /locus_tag="ACJJDL_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573614.1"
                     /translation="MQTEQGLLPMPSESRFRRHFVLPCAARIIGAFCRAGSPKDKDYR
                     YANHTYHSRTARVA"
     gene            6300..7136
                     /gene="panC"
                     /locus_tag="ACJJDL_000868"
     CDS             6300..7136
                     /gene="panC"
                     /locus_tag="ACJJDL_000868"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HGG7573615.1"
                     /translation="MQIIHTIQELRAWRKNAGTVAFVPTMGNLHEGHLALVREAKKRA
                     DNVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFLGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLAQGSLDYA
                     GLEKRAVQSLTEYGWVVDYVEIRRVDTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            7301..9139
                     /locus_tag="ACJJDL_000869"
     CDS             7301..9139
                     /locus_tag="ACJJDL_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573616.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADAKPPKEVGKVFRKQQR
                     YSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGEAQKRAGWLRNVLRERGNQHLDGLEEV
                     LAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQG
                     REKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTGEQRGRAAMTAAMIYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPVGSNT
                     ELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            9279..9860
                     /locus_tag="ACJJDL_000870"
     CDS             9279..9860
                     /locus_tag="ACJJDL_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HGG7573617.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            9870..10715
                     /gene="ispE"
                     /locus_tag="ACJJDL_000871"
     CDS             9870..10715
                     /gene="ispE"
                     /locus_tag="ACJJDL_000871"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HGG7573618.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVGGIPQEADLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCSRTTQQLIDLGATLGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRDSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            10723..10798
                     /locus_tag="ACJJDL_000872"
     tRNA            10723..10798
                     /locus_tag="ACJJDL_000872"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10756..10758,aa:Gln,seq:ttg)
     gene            10811..10886
                     /locus_tag="ACJJDL_000873"
     tRNA            10811..10886
                     /locus_tag="ACJJDL_000873"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10844..10846,aa:Gln,seq:ttg)
     gene            10895..10970
                     /locus_tag="ACJJDL_000874"
     tRNA            10895..10970
                     /locus_tag="ACJJDL_000874"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10928..10930,aa:Gln,seq:ttg)
     gene            11138..12121
                     /locus_tag="ACJJDL_000875"
     CDS             11138..12121
                     /locus_tag="ACJJDL_000875"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HGG7573619.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            12188..12760
                     /locus_tag="ACJJDL_000876"
     CDS             12188..12760
                     /locus_tag="ACJJDL_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HGG7573620.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(12885..14054)
                     /locus_tag="ACJJDL_000877"
     CDS             complement(12885..14054)
                     /locus_tag="ACJJDL_000877"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HGG7573621.1"
                     /translation="MTAHKILPVLLSIILGISHATAASPVPNRPTAHAAPTLQTPETL
                     TAAHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTITEKEIVALENVEKRSRWQRLWMRLTGQ"
     gene            14202..15728
                     /gene="ilvA"
                     /locus_tag="ACJJDL_000878"
     CDS             14202..15728
                     /gene="ilvA"
                     /locus_tag="ACJJDL_000878"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HGG7573622.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(15785..16858)
                     /locus_tag="ACJJDL_000879"
     CDS             complement(15785..16858)
                     /locus_tag="ACJJDL_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HGG7573623.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKEQICTKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(16855..17715)
                     /gene="cysW"
                     /locus_tag="ACJJDL_000880"
     CDS             complement(16855..17715)
                     /gene="cysW"
                     /locus_tag="ACJJDL_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HGG7573624.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(17967..18803)
                     /gene="cysT"
                     /locus_tag="ACJJDL_000881"
     CDS             complement(17967..18803)
                     /gene="cysT"
                     /locus_tag="ACJJDL_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HGG7573625.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
     gene            19093..19425
                     /locus_tag="ACJJDL_000882"
     CDS             19093..19425
                     /locus_tag="ACJJDL_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573626.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGTESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GEACACGH"
     gene            19757..20266
                     /locus_tag="ACJJDL_000883"
     CDS             19757..20266
                     /locus_tag="ACJJDL_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HGG7573627.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT         4912 a         4670 c         5572 g         5167 t
ORIGIN      
        1 caagtttatc ctagttatct aggacagccc ctaaactttt tggaagcatc tctaatttat
       61 taatatcgtt catatcccct acacacagaa aaaatcttgg ggaatttcct ttaatctttt
      121 taataaatct tcacaaagcc taaaatgatt taattttagt ttctttttat ttttttgata
      181 aattctagat aacctcgctt attaggaaaa atttcaggat atattccttt ttcttctaaa
      241 gaagtatagt ggattaaatt taaatcagga caaggcgagg aagccgcaga cagtacaaat
      301 agtacggcaa ggcgaggcaa cgccgtacta atccactata tatatccatt catatagaga
      361 aaaattctta tacccaatat aaaacaaggt ctttcattat attttgaaaa acctagaagc
      421 tttgtatcta ttggtttatc aaaattaata attattgcag aagacatgta ggctaataat
      481 cttgatttat ctatatttta ttaattatat atttaacccc gaagtcaata tagaaattta
      541 gtgattttaa agttctctta tcaattttaa tctcagggag tacataaaaa tcctcagaat
      601 aggcaaactc tatatatgca tcatcattca ataataattc aataatattt ttcatttcat
      661 ccgaaagaaa tgtaaccatc tcatattgac atttattttt agataccatt tttgaatatt
      721 gattaaataa ttttggatta ctatttttag taattaatcc ttccggagta ataaaaccac
      781 tttgtataaa gtcatcactt atattaacag ccttccgaaa aaaaatataa tcacactctt
      841 tgttatcaat ataaaatctc atactcttta ataatgaaat ataagaattt ccagaattac
      901 aagcaatttg aaaaaacatc attactccta aaactcataa atagtaagga atatatatat
      961 atgcatattc cttactattt tttcacaaat tatgcttatc tatgcttatt tccataaaaa
     1021 gcatgccctc gaattttttg acttgagttc tggaaatgag aataatttga atggatttcc
     1081 ttctgtccat gtctaataac attttgtctt ccccaagctt ggtttgctac cgctcttgct
     1141 tgttgagatg ttcgtgcata gacattagct cctcttgata aagcttgtgc tgcaacacgc
     1201 tgcgtaaccc aacgctgcgc aaggaatctg cccgcatgca aaattcctat tgccaccaac
     1261 ggtgccgcag ccccttcagt ttctttcatc tccttttgag aaagctccgc caactgcatc
     1321 ggcgcatctg cctgcgtgtg gaacacttgg ttttcaaatg tctgattgtc caagccgttt
     1381 gccattgcgg gggcaatcat agacagcatc attacggctg cggtgatttg ttttttcata
     1441 ataactcctt tggattacaa ggttggaaaa tcaaaacctg cttaaaatgt atgctgtacg
     1501 ccaaatttca gttcggaact gctttgccct gaaacgttga aacgtgcgga tgcgtttaaa
     1561 gccgtggttt tggtgaaacc gaaacctgtg ccgaaatgag cgtaggtgga tgtgtttctt
     1621 gcggtttctt ttttgccgtc tatgcggtcg ggctgtgtgc ccagccattg gatgcctccg
     1681 gtcaggctga ttctgtcgtt ggcggcaaat gagatgttgg ggttgatcag caggtagttg
     1741 cccgatttgt agcggatgcc gtctgaaagg gttttgctgc cgttgatacg gtaggcggcg
     1801 gtgagggaaa ggacaatcgg atctatggct ttgtaggtgg tggcgccgat gagccaggat
     1861 tttcccgacg aggctttgtt gcgcgatttt tcgtaaaccg tgctttcaag aaagctgatt
     1921 agggcggggt ttttgtcgtc tttaaggaaa gtgtggctga tgccgaggga tacgtcggac
     1981 atccgtttgt tgcgggtttt gctgttgccg tcgagtttgc gttcttcgtg ccacagatag
     2041 ctgccgctgc cgtaaatgtc ggtattcccg gtcagtccgt agcgcaaacc gagcgtgcca
     2101 acgagcatat cggtattgct gccgttttct tggatttcgg tcggaatggg gataaacgag
     2161 gttgcgccgg tttggatgta aaccggtgcg gcaagttcgg cgcggttgtt ttcgctattc
     2221 aggtaggtaa gggaagtttc cagtttccat ttgcccttgt cagtcattat gtcttcaatc
     2281 gtcaagggca ggtcggcata agcggataaa ggcaggatgg cgggcaaggc gggcaaaaag
     2341 atgcgcttca tatttctcct attgatatta attcttattt actgataata atgaatatcc
     2401 gataatcttg tctaaataaa tttttaaatc ataaaaaaca atatgtttgt ttttgtcaat
     2461 tatgtttcga tatgccgtct gaaaagtttg tgaaaaacgg ttacaatccg ccgcatgaaa
     2521 aaacgcaata atcctcttcc gctgttgaac ggtgtcaaac ccagttattt ggtgctgccg
     2581 catgaaaagc agttttacgg gctgccgctg ctgcattttc tgtgcatccg ctttcctttt
     2641 gtgggcgcgg acgattggcg caggcggttg aacagcggtt ttgtggtcgg ttcggatggt
     2701 gcggcgttgg acgaacatac tttgttcgag ccgggtaagg tgatgtttta ttatcgggaa
     2761 accagcagtg aggatgagcc gcgtattccg tttgaagaaa agattttgca tattgatgag
     2821 catttgattg tggtggacaa gccgcatttt ctgcccgtca tccccagcgg gcgtttttta
     2881 agggaaacgc tgctcacacg tctgcgcctg cgtcccgaat tgcagcattt gaatgttgaa
     2941 gacattacgc cgctgcaccg cttggacaag gatacggcag gcgtgatgtt gttgtcgcac
     3001 aatcctgcca cgcgcggggc ttatcagacg atgtttcaaa acaaaacggt atggaaaacg
     3061 tatgaggcgc ttgcgctgac aaggacggat ttgccgtatc cgctcgatgt ggtttcgcgt
     3121 ttggtaaggg gtgaaaaatt ttttacaacg caagaggtgg aaggcgtgcc aaacgcacat
     3181 acgacggtcg aactgattga aaacaggggg gaattcagcc tttaccgcct tacgccgcat
     3241 accggcaaga aacaccagtt gcgcgtgcat atgatgggct tgggtatgcc gctgttgaat
     3301 gacgcgctct atcccgtgcc gtctgaagcg ggcagcgagg attatcggaa acctttgaag
     3361 ctattggcaa aaaagattgc gtttgcagat cctttgtcgg gtcgggaaag ggtgttttgc
     3421 agcggatttt gcctataatg agagggaacg caaacccgta tcggcggatg ccaccgatac
     3481 gggttttaca ttatcgatgc cgtctgaaag gggctttatc cgttcaggca tacgggcgcg
     3541 aagcggagga tggtgtcgcg caagacgatg agtttgccgt gaaagaaatg cgtggaaccg
     3601 gcgatggtaa tgacgggcaa atcttgcggt tccgcccatt tcagggcttt cccgatttcg
     3661 acgacttcgt cttccgcacc gtgtatcatc agggttttgg caacgttggg aacggcggac
     3721 ggttccggac ggtcggtata gtggcagact gccgcgccga tgagcagtaa caggtcgggt
     3781 atgcgcgctt gtgcggcaaa tgtggcgaca tagccgccga aggagaagcc ggataaggca
     3841 aattcggggg cttcgggatg ttgggcgcgg gcatagtcga tgacggcgag gcagtcttgc
     3901 gtttcgccgt gtccgtaatc gtgtgtgcct tcgctattgc ctacgccgcg aaggttgggc
     3961 aggtagcagt ggaagccgag tttgcttaag gctttggcgg cagtttggat gactttgttg
     4021 gtgtttgtcc cgccttgtag ggggttggga tgattgatga cggcaacacc gcgtgccgat
     4081 acttgttcgg acgggatatg gatggtttct aaaatgccgg caggaccgga tatgtgtatg
     4141 gtttcgggtt tcagcataat gatttcctct tgattttccg catgttccaa tgcggtcatg
     4201 aagatagttg cttaaaggta gaaatgcttg ccgttgttgg ggttggacgc tttcaggccg
     4261 gcaagcatgc ggtggaagtc caatccgtat gcgttgctca gtttgtcggc acgttttttg
     4321 agtttgtcta tgttttgctc tttggggctg ctttggaagg ccattaccgc gacattgccg
     4381 tggctttcgg caggaagttc caatacgcgc ccttcaaaaa cgctcaacaa ccgttcgatg
     4441 aagcgttgat agcgtttgtc gccactccac cagttggtaa cgaatatgcc gtctgaagag
     4501 agtgcgtttc ggcagtctcg gaagaacggt tcttcaacca gcgtatcgat gatttgttcg
     4561 ccgtcgaatc cgtccaccaa gatgatatca gtgttgtggc ggaagacttt gatgtactct
     4621 gcaccatccg cttcaataat ttcaaatttc tcactctcga aaggcaactc aaacaggttg
     4681 cgggcaatgg cgataacctg cgggttgata tctacggcag tttgacgcgt gtcgggcagg
     4741 taggtgtcta tccagcgcgc aaacgagccg ccgcccaagc cgatttgggt gatatgctgc
     4801 ggaagcgcgt cggtaaacag cagccatccc atcatcgcgc ggctgtaaga gagtaccagc
     4861 tcggacgggt ggtcgaggtt cattgagctt tgaacggtgt cgctgcccaa gtgaagcgaa
     4921 cggatattgc cttcttcgga aatgccgact tcgggaaagc cggattttgc aggacgcagg
     4981 cggcggtagg gatgtcttgc catcggtgtg aacggtcggt ttgaaaggcg gatattttat
     5041 cagaatgccg atgcttgtcc tgcttcaaat taatttcttt tcaaataaat tacttattcg
     5101 gatttgccgg ggctttcgga taaattcctt gccaaagtgt gaagttgcct gcataattcg
     5161 ccttctttgc cggtatagct cagttggtag agcacctgac ttgtaatcag ggggtcccga
     5221 gttcgactct tggtgccggc accagatttg acagtccgat tgtgtaaaac agtcgggctg
     5281 ttttgcattt gcggcacggt cggtggcagg gctgcgggca tttcactata atagcccgtt
     5341 tcaaactgaa aaggccgtct gaaaagggcg gggtaacaat atctgatgat tactgtgaac
     5401 acactgcaaa aaatgaaggc ggcgggcgag aaaatcgcta tgctgaccgc ttacgaatcc
     5461 agttttgccg cgctgatgga cgatgtcggc gtggatgtgc tgctggttgg ggattctttg
     5521 ggaatggcgg ttcaagggcg gcagtcgacg ctgcccgtca gcctgcgcga tatgtgttat
     5581 cacaccgaat gtgtagcacg cggtgcaaaa aatgcgatga ttgtcagcga tttgccgttt
     5641 ggtgcatatc agcagagtaa ggagcaggcg tttgccgccg ccgccgaact gatggctgcc
     5701 ggcgcgcata tggtcaaact cgaaggcggt gtgtggatgg cggaaacgac cgaatttctg
     5761 caaatgcgcg gtattccggt ctgtgcccac atcggtctga ccccgcaatc cgtgtttgcc
     5821 ttcggcggat acaaggttca ggggcgcggc ggcaaggcgc aggcgttgct taacgatgcc
     5881 aaggcgcatg atgatgcggg ggcggcggtc gtgctgatgg agtgtgttcc tgcggaactg
     5941 gcaaaaaagg taactgaatc cgtttcctgt ccgaccatcg gcatcggcgc gggtgtcgat
     6001 tgcgacgggc aggttttggt gatgcacgat atgctcggca ttttcccggg taagacggtg
     6061 aaattcgtca aaaactttat gcaggggcaa agcagcattc aggcggcggt tcgggcgtat
     6121 gttgccgaag tcaaagccaa aaccttccct gctgcggaac atatttttgc agactgaaca
     6181 aggtttgctg ccgatgccgt ctgaaagccg tttcagacgg cattttgttt tgccgtgcgc
     6241 ggcgcgtata atcggcgcgt tttgtcgggc aggaagcccg aaggataagg attaccgtta
     6301 tgcaaatcat acataccatt caagaactgc gcgcgtggcg taaaaatgcg ggaacggtgg
     6361 catttgtgcc gaccatgggc aatctgcacg aagggcatct tgccctcgtt cgcgaagcca
     6421 aaaaacgcgc cgacaacgtt gttgtcagca tattcgtcaa ccgcctgcaa ttcggtcagg
     6481 gcgaggattt cgacaaatat ccgcgtactt tgcaacagga tgcggacaag ctggaagccg
     6541 agggtgttgc cgttgttttc gcgcccgatg agaaagaact ctatccgaac gtggaacagc
     6601 gttacaacgt cgaaccgccc aatctgcaaa atgagttgtg cggcaagttt cgtccgggac
     6661 atttcctcgg ggtggcgacg gtggtgtcca agctgttcaa tattgtcgcg ccggatgttg
     6721 cctgtttcgg caaaaaagac tatcagcagc ttgccgtgat taaaggtttg accgaggatt
     6781 tgaattttga tgttgaaata gtgcctgtcg atacggggcg cgcggaagac ggtttggcac
     6841 tctccagccg caaccagtat ttgagtgcgg cggaacgcga cgaagcaccg cgcctgtacc
     6901 gcgaattaaa ggctgttgcc gaatccttgg cgcagggcag tttggattat gcaggtttgg
     6961 aaaaacgtgc cgtccaatcc ctgacagaat acggctgggt ggtcgattat gtcgaaatcc
     7021 gccgcgtcga tacgctcgaa gtggcgcggg cgggagataa gaaactggtg gtcttggccg
     7081 ccgcccgtct ggggacgacg cgcctgattg acaatttgga aataaaactc ccttaaaccg
     7141 caagcgtcgg gaatgccgtc tgaagcggat ttgcgtttca gacggcattt atttttttga
     7201 acggggtttc gcaaatctac aaacgattct gcttgtgata aagttacgcc tgattatatg
     7261 ccgtctgaaa gttcggacgg ctgtcggata aaggaagatt atgttacccg cccgtttcac
     7321 cattttatct gtgctcgcgg cagccctgct tgccgggcag gcgtatgccg ccggcgcggc
     7381 ggatgcgaag ccgccgaagg aagtcggaaa ggttttcaga aagcagcagc gttacagcga
     7441 ggaagaaatc aaaaacgaac gcgcacggct tgcggcagtg ggcgagcggg ttaatcagat
     7501 atttacgttg ctgggagggg aaaccgcctt gcaaaagggg caggcgggaa cggctctggc
     7561 aacctatatg ctgatgttgg aacgcacaaa atcccccgaa gtcgccgaac gcgccttgga
     7621 aatggccgtg tcgctgaacg cgtttgaaca ggcggaaatg atttatcaga aatggcggca
     7681 gattgagcct ataccgggtg aggcgcaaaa acgggcgggg tggctgcgga acgtgctgag
     7741 ggaaagagga aatcagcatc tggacggact ggaagaagtg ctggctcagg cggacgaagg
     7801 acagaaccgc agggtgtttt tattgttggc acaagccgcc gtgcaacagg acgggttggc
     7861 gcaaaaagca tcgaaagcgg ttcgccgcgc ggcgttgaaa tatgaacatc tgcccgaagc
     7921 ggcggttgcc gatgtggtgt tcagcgtaca gggacgcgaa aaggaaaagg caatcggagc
     7981 tttgcagcgt ttggcgaagc tcgatacgga aatattgccc cccactttaa tgacgttgcg
     8041 tctgactgca cgcaaatatc ccgaaatact cgacggcttt ttcgagcaga cagacaccca
     8101 aaacctttcg gccgtctggc aggaaatgga aattatgaat ctggtttccc tgcacaggtt
     8161 ggatgatgcc tatgcgcgtt tgaacgtgct gttggaacgc aatccgaatg cagacctgta
     8221 tattcaggca gcgatattgg cggcaaaccg aaaagaaggt gcttccgtta tcgacggcta
     8281 cgccgaaaag gcatacggca gggggacggg ggaacagcgg ggcagggcgg caatgacggc
     8341 ggcgatgata tatgccgaca gaagggatta caccaaagtc aggcagtggc tgaaaaaagt
     8401 gtccgcgccg gaatacctgt tcgacaaagg tgtgctggcg gctgcggcgg ctgtcgagtt
     8461 ggacggcggc agggcggctt tgcggcagat cggcagggtg cggaaacttc ccgaacagca
     8521 ggggcggtat tttacggcag acaatttgtc caaaatacag atgctcgccc tgtcgaagct
     8581 gcccgacaaa cgggaggctt tgagggggtt ggacaagatt atcgaaaaac cgcctgtcgg
     8641 cagcaataca gagttacagg cagaggcatt ggtacagcgg tcagttgttt acgaccggct
     8701 tggcaagcgg aaaaaaatga tttcagatct tgaaagggcg ttcaggcttg cacccgataa
     8761 cgctcagatt atgaataatc tgggctacag cctgctttcc gattccaaac gtttggacga
     8821 aggcttcgcc ctgcttcaga cggcatacca aatcaacccg gacgataccg ctgtcaacga
     8881 cagcataggc tgggcgtatt acctgaaagg cgacgcggaa agcgcgctgc cgtatctgcg
     8941 gtattcgttt gaaaacgacc ccgagcccga agttgccgcc catttgggcg aagtgttgtg
     9001 ggcattgggc gaacgcgatc aggcggttga cgtatggacg caggcggcac accttacggg
     9061 agacaagaaa atatggcggg aaacgctcaa acgtcacggc atcgcattgc cccaaccttc
     9121 ccgcaaaccc cggaaataat gcaggtccat cctttcagac ggcataaggt ttgccgggaa
     9181 gctgcggcat tcgggcaaac ggcacgcagt tcgcacgcgt tttgcacggc acaccgaacc
     9241 catcggccgg caggatggca tccgttaagg aaattctgat gaaacacact gtatccgcat
     9301 cggtcatcct gcttttgacc gcttgcgcgc aattacctca aaataacgaa aacctgtggc
     9361 agccgtccga acacacccgc agtttcacgg cagaagggcg gttggcagtg aaagcggaag
     9421 ggaaaggttc gtatgcaaat ttcgattgga cataccaacc gcccgtggaa accatcaata
     9481 tcaatacccc tttgggcagt acgctcgggc agttgtgtca agacagggac ggcgcattgg
     9541 cagtggacgg caaaggaaat gtctatcagg cggaaagtgc ggaagaattg agcaggcagc
     9601 tggtcggttt caaactgcca atccaatatc tgcatatctg ggcagatggc aggcgtgtgg
     9661 cgggcgcgcc ttaccgcatc ctgccggacg gcatattgga acaatacggt tggactgtcg
     9721 gcagaaccgc cgacagtggg gggcaagtcc gaacgttgca actgaataac ggaaatttga
     9781 acatcaggct ggttttcacc gaaatcggta tgccgtctga aaccgaaacc ccggaacgct
     9841 gtgcggcgcg cacgagataa ggcggacaga tgaatattgc ggacggacgg caggcgtttc
     9901 ccgcacctgc aaaactgaat ctcgatttga ggattaccgg caggcgggaa gacggttatc
     9961 acaatatcga aagcatattc tgcctgatag atttgcagga taccgtatat ttgaaaccga
    10021 gggacgacgg caaaatcatc ctgcacaatc ctgtcggcgg aataccgcag gaagccgatt
    10081 tgagctaccg tgccgcatcg ttgctgcaaa aatatgcgcg caaccccgcc ggcgtggaaa
    10141 tatggctgga caaaaaaatc ccgacagggg cgggtttggg cggcggaagc tcggatgcgg
    10201 caaccgtttt gctggtgttg aaccgttggt ggcagtgttc ccgaacgacg cagcagctga
    10261 ttgacttggg cgcaactttg ggtgcggacg taccattttt tattttcgga aaaaatgctt
    10321 ttgcaagcgg gataggtgaa aaactgatag gaatggatat tccgaaacag tggtatgtca
    10381 tcgtcaaacc gcccgtccac gtttccactg caaaaatttt cacacacgaa ggcttgacac
    10441 gaaattccgc ctcaagcata atgccgactt tccaaaacct gcaaccgttt agaaatgata
    10501 tgcaggcagt tgtatttaaa gaataccctg aagtttggaa agcctattcc gaattgtccc
    10561 gatatggatt tgccttaatg acaggttctg gtgcgtgtgt attcacggcg tgtcaagata
    10621 gggatagcgc atacaatata taccgacaag tttcaggttt gtacgaggca tatttggcag
    10681 agggtctttc aaaacatcct ttgttgtccg tataaacatt gttggggagt cgtcaagcgg
    10741 ttaagacact ggattttgat tccagcatgc gaaggttcga atccttcctc cccagccaag
    10801 ccaaacgagt tggggagtcg tcaagcggtt aagacactgg attttgattc cagcatgcga
    10861 aggttcgaat ccttcctccc cagccagccc tttttgggga gtcgtcaagc ggttaagaca
    10921 ctggattttg attccagcat gcgaaggttc gaatccttcc tccccagcca gataaaagcg
    10981 tgtaagcctg cttacacgct ttttatttca tagaaataaa aatattgaaa tgcctttgtt
    11041 tgtgtcggat gttgcaggta taatgtcggg cttggtacaa gcagagggaa gcattgtgtt
    11101 ttctgagcgg aagttaaaca taaaatcagg tgagaatatg gctgcgtacg acagtttgat
    11161 ggtatttaca ggcaatgcca atcccgaatt ggcacaacgt gttgtcaggc atttggacat
    11221 ttctttgggc aatgcttccg tatccaagtt ttcagacggc gaagttgccg tcgaactgtt
    11281 ggaaaacgta cgcgggcgcg atgttttcat ccttcagccg acctgtgcgc cgaccaatga
    11341 caacctgatg gaaatcctga cgatggcgga tgcactgaag cgtgcttcgg caggtcgtat
    11401 taccacagcc attccgtatt tcggctatgc gcgccaagac cgccgtccgc gttccgtccg
    11461 cgttccgatt tctgccaaac tggtggcaaa tatgctgtat tcggcaggga tcgaccgtgt
    11521 tttgactgtc gatttgcatg ccgaccagat tcaaggtttc ttcgatattc cagtggacaa
    11581 tatttatgcc accccgattc tgttgaacga catcaaacaa cagcggattg aaaatctgac
    11641 cgtcgtcagc ccggacatcg gcggtgtcgt ccgcgcccgc gccgtggcaa aatccctgaa
    11701 tgccgacttg gcaatcatcg acaaacgccg cccgaaagcc aatgtggcgg aagtcatgaa
    11761 catcatcggc gatattcaag gcagaacctg tctgattgtg gacgatatga ttgacactgc
    11821 aaatacgctg tgcaaagccg ccgtcgctct gaaagagcgg ggggcggaac gtgtcttggc
    11881 atatgccagc cacgccgtat tctccggaga ggcggtcagc cgtatcgcct catccgaaat
    11941 cgaccaggtg gtcgtaaccg ataccattcc tttgtctgaa gcggctaaaa actgcgaccg
    12001 tatccgtcag gtaacgattg ccggtctgtt ggccgaaacc gtccgccgca tcagcaatga
    12061 agaatccgtc tcatatcttt tcaatgaaga agtgatgaca ggcagtatgt tgctgccata
    12121 agcccgaagc cgtcttaagc tggtcgcggc cgatgacggc gattttacct aacttggagt
    12181 atttaacatg acttatgaaa ttcaagcctc tgttcgtgaa gcacaaggca ctggtgcgag
    12241 ccgccgcctg cgtcgcgaag gccaaatccc cggcattctg tacggtgaag gtcaagagcc
    12301 tgttgcaatc gctgtggatc acaaaaccgt attctacgca ttggaaaaag aatctttcca
    12361 taccgcgttg attaaattgt ctctgaacgg cgaaaccaaa gacgttatcg tccgtgattt
    12421 ccaaatgcac ccgttccgcc gcgaagttca acacatcgac ttccaagctg tgaaagccga
    12481 tcaacttgta cgcatccgtg ttcccctgca catcgttaac gctgaaaatt cccaagcggt
    12541 caaactgcaa ggcggccgtg tatctctgtt gaacacgact gttgaagtgc ttgcattgcc
    12601 tgccaatatc cctgctttct tggatttgga ttgtgccgaa gtggttgccg gcgacattct
    12661 gcatctgtcc gacatcaaac tgcctgaagg tgtagaaagc gtttccttga aacgtaacga
    12721 aaatctggct gttgccaccg ttaccggtaa aaaacgctaa ttgatttcag cagcagggcg
    12781 gcgcgtatgc aatacgtacc gccctgttgt tttatgccgt ctgaaccgtg tttcagacgg
    12841 catttcttta tttgttggaa aaacgggata tttgaaacgg cagattactg tcccgtcaga
    12901 cgcatccaaa gcctttgcca ccggcttctt ttttctacat tttccagtgc gacaatttct
    12961 ttttcggtaa tggtgtatcc gttttgcctg attttgattt ttcctaaaat ctgtcccttt
    13021 tttaccgggg cgggaatcgg ctgtatggtt tctagaattt gttctgccat tttcgcttcc
    13081 ttatgtggca gagtgatgta ggcttctttg aggaagcctg cgcggacggt ttttttgctg
    13141 cctccggaaa tttggatttg ggcaacggtt ttgcctttcg gatatatttt gggcgtatcg
    13201 aaggcctgca atgcccagtt cagcagcttg ctgttgtctg atgcgcgtgt ttccgccgat
    13261 tccgaaccca atgtgatgac aaggatgtgc ctgccgttgc cggagtatga cacggcaagg
    13321 ttgtagccgc cgctttctgt gtgtccggct ttcagaccgt ttacattgtt gtccctatat
    13381 aaaaggatat tgcggttgtt ttgctctata tttttgaatt tgaaagattt gatggaaaac
    13441 agcgggtaat attccggaaa gtcgcgcatc aatgcttcag acagctgggc gaggtctttg
    13501 gcggtggaaa cctgtccttc tctactcaag cctgtcgggt ttttgaatac agtgttcttc
    13561 atgcccaagc gtcgggcttc tttgttcatt tgttgcacaa aattttcaat cgagccgttg
    13621 cccagccggc cggcaagggt tagggcggca tcgtttgcgg atagggcaat catgcctttt
    13681 aagagtttgt cggtgctgac cgtatcgccg ggacgtacaa acattctgct tccttctgaa
    13741 gcccatgcgg attcgggtat ttttaagttt tcttcagatt ggatatttcc cgatttcatg
    13801 tttttgaaaa ccaaatatgc ggtcatcagt tgggttagtg ccgccggttc gacaggggta
    13861 ttgatgtttt tggcggataa agtctgtctg ctttgaaggt cgataacgat gtgtgccgct
    13921 gtgagggttt cgggtgtttg gagcgtgggg gcggcgtgtg ccgtcggtct gttgggcacg
    13981 ggcgatgcag ccgttgcgtg agaaatgcct aagatgatgg aaagcaggac gggcaggatt
    14041 ttatgtgctg tcatgaaata ttctaattgt gtgcgtgttt cagtctgccg attatacgct
    14101 tagggtgtct gatcgggcgg atttttcttg ctttcgcgcc gtcttgggcg tatggttttg
    14161 ggttttgcga ttttaataaa ccgattatcc catattgaat tatgaacacg ccccttcctt
    14221 attccaatta cctcatccgc atcctgacgg catctgtcta tgatgtcgcg gtcgaaacgc
    14281 ctttggaacc ggcacgcagc ctttctgtac gtttgaaaaa caacatcctt ttgaaacgcg
    14341 aagatttgca gccggttttt tcgttcaaaa tacgcggcgc gtacaacaaa atgtccaagt
    14401 tgccgaaaga tgcgctcgct tgcggcgtga ttgcggcaag cgcgggcaat catgctcaag
    14461 gcgtggcatt gtccgcacag cgtttgggct gccgtgccgt tatcgttatg ccggagacta
    14521 cgccgaaaat caaagtggat gcggttaaga gccgtggcgg cgaggtggtt ttgcggggag
    14581 tttcatacaa cgatgcctac gattatgcga tggagttggc ggaaaaagaa gggttaacct
    14641 atatcgcgcc gtttgatgat cctgatgtga ttgcgggaca ggggacggtg gggatggaaa
    14701 ttgtcagcca gcatcccgat ccaatccgcg ccgtattcgt accgataggc ggtggcggtt
    14761 tggcggcggg cgtggcggca tttatcaagc aggtccgtcc cgaaatcaaa gttatcggcg
    14821 ttcagaccaa cgattcctgc tgtatgaagc agtcggtcga agcgggtgaa atcgtccatt
    14881 tgaaagatgt cgggctgttt tcagacggca ctgcggtcaa agtcgtcgga aacgaaacct
    14941 tccgcctctg caaagaactt ttggatgaaa tcattacagt cgataccgat gcggtttgcg
    15001 gcgcggtcaa ggatattttc gatgacacgc gcagcattac cgagccggcg ggcgcgttgg
    15061 cgttggcggg tctgaaagcc tatatcgccc gagaaggcgc ggaaaaccaa accctgattg
    15121 ccgttaccag cggtgcgaat atgaattttc accgtttgcg ccatgtgtcg gagcgtagtg
    15181 aattgggcga gggcaacgaa ggtatttttg ccgttaccat ccccgaagaa cgcggcagct
    15241 tccttaagtt tgtcaatata ttgggaaata ggaatattac cgagttcaac taccgctacg
    15301 gagacgatga aaaagcgcat atctttgtcg gacttcaagc ggcaggtccg caggatttgg
    15361 cggttatcgg tagccggttg gatgaggcgg gattgcccaa tgtcgacctg accgatgatg
    15421 agattgccaa aatccatatc cgctatatgg tcggagggcg gacggacaaa gtagaaaacg
    15481 agcgtctggt cagttttgag tttccggagc gtccgggggc gttggcgcgt tttttgaacc
    15541 atatgcaggg cggttggaac attacgctct tccattaccg caaccacggt gcggattacg
    15601 ggcggatttt ggtcggtatc gatgtgccgc cgcacgatgc cgccgcattt gacggtttct
    15661 tggaaagtct gggatacagc tatcacgagg aaacgcaaaa tgccgcgtac aagctgtttc
    15721 ttgcctgacg cttgaaagca caatgccgtc tgaaagcctt tcagacggca ttgcgctttc
    15781 atggttaaat cgaatattca atcagttcgt tttgagagaa gacataaacc tgtttcggaa
    15841 tcagcttcaa ttctttgcct tcggcgattg ggtaacgcgc ggcatcgctg ccagccagcg
    15901 tgatatgcac gtcttgtttg ccgtgtttca ccaaaatatg cgtcaatgcc ccgacggcgt
    15961 ggactttttc gatttcggca caaatcatcg gtgtttcgtg ttcggcggcg atctgccatt
    16021 cgtgcgggcg gatatagccg gtggcggttt gttcctgcca tttgtattgt gcgtccaatt
    16081 tccacgcgaa gccgttataa tgccagaagc ctttttcgat acgtccttca aaagcgtcgg
    16141 tttcgccgag gaactcggta acgaaggcat tttcgggttt gcggtaaata gcttcggcgc
    16201 tgccggtttg ttcgattttg ccgtggttca tcacgacgat ttcgtcggaa acttcgaggg
    16261 cttcttcttg gtcgtgcgta accagaatgc tggttacacc caggttgtga tggatgtcgc
    16321 gcagccaggt gcgtaattct ttgcgtactt tggcgtccaa cgcgccgaag ggttcgtcca
    16381 aaagcaggag tttcggttcg accgcaagcg cacgggcgag ggcgatgcgc tggcgttgcc
    16441 cgccggagag ttggtgcgga taggattttg ccaaatgcga gagttgtacg agtttcagca
    16501 attcttcgac tttagtgcag atttgttctt tggacgggcg ttcggacttg ggcaatacgg
    16561 tcaaaccgaa agcgacgttg tcaaacacgt tcatgtggcg gaagagggcg tagtgttgga
    16621 acacgaagcc gactttgcgc tcgcggacgt gtttggcggt tacgtcttgc ccatcaaaca
    16681 gaatcttgcc gccgtcggcg ttttccagtc cggcgataat gcgtaaaagc gtggttttgc
    16741 cgcagccgga cgggccgagc agggaaacga gtttgccggt ggggacgttg aggttgatgt
    16801 ttttcagcgc gtgaaaattg ccgaagtgtt tgtttaagtt ttggatggtg atactcatac
    16861 tgcgttcctt tcggcggcgg cgagtttttt gtcttgtaat ttggtgatga tgttctgcac
    16921 cgccagcgtc gccagtgcca aaagtgccaa tacgccggag agggcgaatg cgccggtgaa
    16981 gttgtattcg ttgtagaaga tttcgaccaa aagcgggacg gtgttggttt cgccgcgtat
    17041 gtgtcccgat accacgctga ccgcgccgaa ctcgcccatc gcgcgggcgt tggtgaggat
    17101 gatgccgtag agtaacgccc atttgatgtt gggcagggta acgcgccaaa acatctgcca
    17161 gccgcttgcg ccgagtatca atgccgcctg ttcttcgctg tcgccctgag cctgcatcag
    17221 cgggatgatt tcgcgcgcga caaaggggaa ggtaacgaac agcgtcgcca gaataatgcc
    17281 ggggatggcg aagataatct gtatgccttg cgcttcgagc cagccaccca atgccgtgtg
    17341 cgcgccgaac aataagacga acattaaacc ggccaccacg ggcgatacgg aaaacggcaa
    17401 atcgagcagg gtagtcagca actgcttgcc gcgaaaatca aaacgggtca gcagccacgc
    17461 catcgccacg cccaagacgg cattgacggg gacgacaatc agcgcggtaa tcagcgtcaa
    17521 tttgatggca gaccacgctt cgggatcgtt taaggatttc aggtacaaat cccaaccgcc
    17581 ttttaaggct tcgtaaaata cggcgacgag cggcacgacc agcatcagca gcagaaagcc
    17641 cagcgcggcg gcaatcagca acacgcgcag ccgacgcggt tcggtcaggt tgggattggc
    17701 ggaatagggt ttcatggcgg tggtgttctc tggttggttt taaaatgttt ggaggtcgtc
    17761 tgaaaaactg tgtttttggg agcggattcg ttttcagaca accttttatt gattaaggga
    17821 ataaaaacgt ctagctaccg tcattcccgc gcaggcggga atccaccaca gggcaacagg
    17881 aaaacagaaa ataaataagg cagccgaaat tcaccaatgg attcccgcct gcgcgggaat
    17941 gacggtaaca ggtatttcag acgacctcaa cccttcgcgc ccgaacgcct gcccaacgcc
    18001 cactgcatca cgttcagcgc aaacagaatc acaaacgaaa ccagcagcat aaacaacgcc
    18061 accgccgacg cgccctgtac gtcgaactgt tccagcttgc ccgtaataat cagcggcagg
    18121 atttcagaaa ccatcggaat attgcccgcg ataaaaatca ccgagccgta ttcccccgtt
    18181 gcccgcgcga acatcattcc cgcgccagtc aagagtgccg gcgtgatttc cggcagcagc
    18241 acgcggcgga acgtcgtaaa gcggtttgcg cccaaagtcg ccgccgcttc ctcatattcg
    18301 cccgataatt cctccaacac cggctgcacg gcgcggacga taaagggcag gctgacgacg
    18361 accagcgcaa tccaaatgcc gacgggcgta aacgcgattt tgatgcccaa aggctcgaaa
    18421 aaacggccta tccaaccgtt gggcgcatac agggtcgcca acgcgatacc cgtaaccgcc
    18481 gtcggcagcg caaacggcaa atcgaccagc gcgttcgcca gacccttgcc cgggaattca
    18541 taacgcacca atacccacgc caccagcgtg ccgaacacga cattggtcag catcgcataa
    18601 aacgacatcc gcaaactcag ccagacggcc gccaagacat tgggttcggc aatcgtgttc
    18661 caaaagccgc cccagccgat ttccgccgcc ttcgccgcca tcatcgcaaa cggcaagacc
    18721 acaagcagcg acaggcacaa tacggtcaga ccaaggctga gtttgaagcc gggcagtacg
    18781 ccgggcgttt tgagcggtaa cataaaacaa tgctgaaaat aaggaaaagg aaggactact
    18841 ttaacgatgc cgtccgaaaa acggaaagaa tggaaagttt ggtgcaaaga cgaatttgtt
    18901 ataaagcggt tggcagtttc tcaagcgggc gcgatgtttt aaaatatagt ggattaacaa
    18961 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcgaggcaac
    19021 gccgtactgg tttaaattta atccactata acaccttgtt ttgacggaaa accatcatat
    19081 aaaggaacac ttatgcagat tttatctttt caaccggaca ttgcggaacg tatgctggaa
    19141 ggtacggaag gcgagtcggt caacgaaaac gcacaattcg tccgtacgga caacggctat
    19201 tggattgcgt ggcatgaagg cgtagcggca ctgcttgcgc ccgatacgcc gccgggcatt
    19261 ccctgttttt gggtggaagg cacggaaagc cttgaagagt tgtgcgtcat ggtggaacgc
    19321 ggcgagtttg acgaagtgga agagtttgac ggcgatgacg acgaatggct cgaaacggca
    19381 cagggttgcg ggcaccacgg cgaagcttgc gcctgcggac attaaaggca ttgcaggctt
    19441 gccgcaaggg gtgcaaggct ttgccgtttt ttaaataatc ggtggattgc atctgtttgc
    19501 aatgggcgga acgcttccct ttgtatttta ttgaataaaa aaacttatct tggtattata
    19561 attaaggcat catcaattat tttgggatgg caataaacgc aaagcattga tttgcgccga
    19621 ttgcagactt attatagcag gttgcggcgc ggacttaatg ggaattgttt atagagcatg
    19681 atggtctgaa acatcattaa ttaaaaatac cattaatccg atttatattt atttcaattt
    19741 caatggaaaa acatcaatga caatgatttt aagcatttta agcctgtttt ttatcatcag
    19801 actgttattt ttagccgtct ctattaaaca tgaaaaagcc ttgattgcca aaggggcgaa
    19861 acaatacgga aaaaccaatt ccacgctgct tgcggcagtt catacgcttt attatttggc
    19921 gtgttttgtt tgggtatggc tttctgacac tgcttttaat ggcatatcct tgattggtac
    19981 gctgacggtg atggcttcgt ttgtgatatt gtcattgatt attaagcagt tgggggagat
    20041 ttggacggtt aaaatctata ttttaccaaa tcatcaaatt aatcgttcgt ggttgtttaa
    20101 aacattccgc caccccaatt attttttaaa catcataccc gaactgattg gcatcgcctt
    20161 attatgtcaa gcgtggtatg ttttattgat tggcctgccg atttatttgc tggtcttatt
    20221 taagcgtatc cgacaagaag aacaggcgat ggcaacactt ttttaacccg tttcatcaat
    20281 tatagcggat taacaaaaac cagtacggcg ttgcctcgcc t
//
LOCUS       DBBZYD010000030        20157 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.030, whole genome shotgun sequence.
ACCESSION   DBBZYD010000030 DBBZYD010000000
VERSION     DBBZYD010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20157
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.030"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(35..250)
                     /gene="nqrM"
                     /locus_tag="ACJJDL_000884"
     CDS             complement(35..250)
                     /gene="nqrM"
                     /locus_tag="ACJJDL_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HGG7573628.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(276..1331)
                     /locus_tag="ACJJDL_000885"
     CDS             complement(276..1331)
                     /locus_tag="ACJJDL_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HGG7573629.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            complement(1484..2701)
                     /gene="nqrF"
                     /locus_tag="ACJJDL_000886"
     CDS             complement(1484..2701)
                     /gene="nqrF"
                     /locus_tag="ACJJDL_000886"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HGG7573630.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVSVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            complement(2715..3308)
                     /gene="nqrE"
                     /locus_tag="ACJJDL_000887"
     CDS             complement(2715..3308)
                     /gene="nqrE"
                     /locus_tag="ACJJDL_000887"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HGG7573631.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            complement(3312..3938)
                     /locus_tag="ACJJDL_000888"
     CDS             complement(3312..3938)
                     /locus_tag="ACJJDL_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HGG7573632.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            complement(3938..4714)
                     /locus_tag="ACJJDL_000889"
     CDS             complement(3938..4714)
                     /locus_tag="ACJJDL_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HGG7573633.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            complement(4707..5939)
                     /locus_tag="ACJJDL_000890"
     CDS             complement(4707..5939)
                     /locus_tag="ACJJDL_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HGG7573634.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGVQAFGALTPDLLQQNIANDWHYTLAD
                     ALGINMSSEASVLGKMLFGAIYFLPIYATVFAVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            complement(5942..7285)
                     /locus_tag="ACJJDL_000891"
     CDS             complement(5942..7285)
                     /locus_tag="ACJJDL_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HGG7573635.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAAPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVVALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            complement(7633..9054)
                     /locus_tag="ACJJDL_000892"
     CDS             complement(7633..9054)
                     /locus_tag="ACJJDL_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HGG7573636.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(9412..9771)
                     /locus_tag="ACJJDL_000893"
     CDS             complement(9412..9771)
                     /locus_tag="ACJJDL_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HGG7573637.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(9768..10373)
                     /locus_tag="ACJJDL_000894"
     CDS             complement(9768..10373)
                     /locus_tag="ACJJDL_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HGG7573638.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGILQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(10420..10902)
                     /locus_tag="ACJJDL_000895"
     CDS             complement(10420..10902)
                     /locus_tag="ACJJDL_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HGG7573639.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      11106..11203
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            11414..12514
                     /gene="gcvT"
                     /locus_tag="ACJJDL_000896"
     CDS             11414..12514
                     /gene="gcvT"
                     /locus_tag="ACJJDL_000896"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HGG7573640.1"
                     /translation="MITLKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYCIVSNGATREKDTAQFHKVGQEFGVSFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVNNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQQA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLDKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEVDVRVLKLPFVRNGQKQFD"
     gene            12675..13061
                     /gene="gcvH"
                     /locus_tag="ACJJDL_000897"
     CDS             12675..13061
                     /gene="gcvH"
                     /locus_tag="ACJJDL_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HGG7573641.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            13208..14455
                     /gene="hemA"
                     /locus_tag="ACJJDL_000898"
     CDS             13208..14455
                     /gene="hemA"
                     /locus_tag="ACJJDL_000898"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HGG7573642.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            14783..15304
                     /locus_tag="ACJJDL_000899"
     CDS             14783..15304
                     /locus_tag="ACJJDL_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
                     /protein_id="HGG7573643.1"
                     /translation="MSCFSIKRMSAFRARITAFFAAFVFLTAALPAYAERLPDFLAKI
                     QPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDVVNTRGYSSKPIDTLMALA
                     KDGTIAGAKLVDHHESIMLIGIPHLPAPGRAIRSNWLPAYIKPNFTSTNRLRLKGLPT
                     VLQPSKETGAGVP"
     gene            15193..16392
                     /locus_tag="ACJJDL_000900"
     CDS             15193..16392
                     /locus_tag="ACJJDL_000900"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HGG7573644.1"
                     /translation="MASGVYQTKLHIDKPITIEGPADRSATIEGDRSGRTIAVHAPDV
                     TLRNLTVTRSGMSLPAMDAGIYLEETAPRALIEHNNILDNSVGVYLHGSADAMVRENK
                     IVGDATLRVNERGNGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRF
                     AVHYMYTNDSEISGNISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIH
                     DNIINKAGKCVFAYNANYDKLSANHFENCQIGIHFTAAIEGTSLHDNSFINNESQVKY
                     VSTRFLDWSEGGHGNYWSDNSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSP
                     AISIVKWAQAQFPAVLPGGVVDSKPLMKPYAPKIQTRYQAMKDGLLKEAETRQLEWGR
                     AENGSLN"
     gene            16450..17064
                     /locus_tag="ACJJDL_000901"
                     /pseudo
     CDS             16450..17064
                     /locus_tag="ACJJDL_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            17159..17290
                     /locus_tag="ACJJDL_000902"
                     /pseudo
     CDS             17159..17290
                     /locus_tag="ACJJDL_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            17287..17781
                     /locus_tag="ACJJDL_000903"
     CDS             17287..17781
                     /locus_tag="ACJJDL_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HGG7573645.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(17869..19530)
                     /locus_tag="ACJJDL_000904"
     CDS             complement(17869..19530)
                     /locus_tag="ACJJDL_000904"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HGG7573646.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSETGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTKKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GVGKDGEPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGMKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMIAAEAVFPLLEHLEEAEGFDSGKEAADYQQRFEQSWLYRELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHYGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(19660..>20157)
                     /locus_tag="ACJJDL_000905"
     CDS             complement(19660..>20157)
                     /locus_tag="ACJJDL_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HGG7573647.1"
                     /translation="DLDFSCGAASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDM
                     RRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSL
                     GHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFTRSPKRQTEFAVGQVK
                     WWRAY"
BASE COUNT         4865 a         5096 c         5445 g         4751 t
ORIGIN      
        1 gtactggttt ttgttaatcc actatatttc ggcgttaacg gtcaacccgt atgccgcctg
       61 cctgtttttc ttcatccagt ttcttttgca gggtgtcgca aggtgtgtcg cagtcgcaca
      121 tttttttcat acccaaggca gtaatgccgc cgcaactgcc tttgatgctg cgtttggaga
      181 aaatatagcc gaccgccata ccgatgatga cggtcaggaa gatgccgaag gtaaggagca
      241 gggttttcat ggtgtttcct aatcggtttg tatgtttagc ggagcagttt ttcaaattcg
      301 gaagacatgg cggtgcggta gccgccttta tccctgacaa tcaggaaaac agcgagtttt
      361 tcgcgctctg ccagctttaa ggcttcggtt tcgcccaata cgaataatcc tgtggacaag
      421 ccgtccgccg tcatcgcact gtctgcgacc acgctgatgg aggcgaggtt gtggctgatg
      481 ggtcgtttgt tgttcgggtt gatgatatgg gagaggcgtt tgccgttttt atcgacgtgg
      541 aaaatacggt aatcgccgga agtggcaagc gaacggttgt tcagcgggac gataatctgc
      601 gtattgccgc cttggacgat attgggctgc tcgataccga tgcgccacgg ttcgccgcgc
      661 gcgtttttgc ctttgccgtg caactcgccg ccgatttcga ccagataatt ttgaatgccg
      721 tatttttcca gttcgcccgc aactttatca acgccgaagc ctttggcaat cgaagataaa
      781 tccaaatagg ccttggggtg ggttttgctc aaggaagcgt aatctttgcc ttgtttcaaa
      841 atgattttgt ctatgcccgt ataagatgcc gcctgtttga tttgttccgg cgacggttca
      901 cgggtaacgg atttgtcggg gccgaatccc caaaggttga ccaaggggcc gacggttacg
      961 tccagcgcgc cgtgtgtcag gcggttcagg cggacggctt cggcagtaac gtgtgcgaag
     1021 tcgcttgaaa tgcggagggg cttgccggct gtgtgttggt tgaaccggct gatttcggag
     1081 tcgggctgat aggtggacat ctgccggttg acttctttaa gcgcgtcatc gatgcgtttt
     1141 tgtatttcgg caggtgaggg gagtttgtcc cgattatttg aaaggtattt gacggtatag
     1201 gtcgtgccca tcgtttcgcc ttgcagggta acggtttgcg cggtttgttc cgaacaggcg
     1261 ttcaggaaga tgaaacccag ggcaaatatc aagacgcgga taaagttcgg caggcgtgtt
     1321 tcagacggca tagtgtttga cggttttggc aaatggtttg aattatatcg caaaacggcc
     1381 ggtatgtttc tatgccgatg ccgtctgaag ggtgttcgga tggcatcggc atagaaaaag
     1441 gaagaaaccg aggtttcttc cttttgtatt tgaagccgaa tatttaaccg ccgaaatcgt
     1501 ccaagaggat gttttcgtct tccacgccca agtctttgag cattttgatg acggactggt
     1561 tcataatcgg agggccgcac atataaaatt cgcagtcttc cggtgcttcg tggtttttca
     1621 ggtggttttc gtaaaccacg ttgtgaatga agcccgtgta gccgtcccag ttgtcttccg
     1681 gcagcgggtc ggacagggcg acgtgccacg tgaagttcgg gaactctgcc gcgagttggt
     1741 caaagtcttc gacatagaac atctcgcgtt tggaacgtgc gccgtaccag aaggtaatct
     1801 tacgtttgga gttcaaacgt ttcaactggt cgaaaatgtg ggaacgcatc ggagccatac
     1861 ccgcaccgcc gccgataaat accatttcgg catcggtgtc tttggcgaaa aattcgccga
     1921 acgggccgga aatcgtaact ttgtcgccgg gtttgagcga ccagatgtag gacgacattt
     1981 gtcccggagg cgcatcaggt acgcgcgggg gcggcgtggc gatacgcacg ttcagcataa
     2041 tgatgccttt ttcttcagga tacgaagcca tagagtaggc acgcaaaatc ggctcgtcca
     2101 ctttggaaac gtattgccac aaattgtatt tgtcccagtc ttcgtgatat tccttaggaa
     2161 tgtcgaagtc tttgtaggca acagtgtgag gaggagcttc aatttgaatg tagccgccgg
     2221 cgcggaaggg gacttcttcg ccttcgggaa tggcaagctt gagttcttta atgaacgtgg
     2281 ctttgttatc gttggagatg acggtgcatt cccatttttt cacgccgaac acttcttcgg
     2341 gcacttcgat gtccatgtcg gttttgacgc tgacttggca cgacagacgg cagccttcgc
     2401 gtgcttcgcg tttgctgatg tgggacagct cggtcggcag gatgtcgccg ccgccgcttt
     2461 ttacgacgac gcggcattgt ccgcacgaac cgcccccgcc gcaggcggag gggataaaga
     2521 tgccttcgtt ggcaagcgcg cccaagagtt tgccgccggc gggcatcgtc agctcttttt
     2581 cgccgttgac tttgatggtg atgtcgcctt cgctgaccag tttggatttg gcaaatagaa
     2641 tcatcagtgc caaaaccaaa acgatgacgg taaacatcac gatacctaaa ataatctcca
     2701 taccggtccc tttcttataa ctggatgccg gagaacgaca taaacgccat cgccatcagg
     2761 ccggcggcga taaaggtaat gcccaagcct ttgaggcctt tgggagcgtc cgaatatttc
     2821 attttttcgg taatgcccgc caaagcgaca atcgccaaca tccagcccaa gcccgcgccg
     2881 aagccgtata caacggactc gccgaagttg tattcgcgtt gcgccataaa cgatacggcg
     2941 ccgaaaatcg cgcagttcac ggtaatcagc ggcaggtaga tgcccaacgc gttatagagg
     3001 gcggggacga atttatccaa gaacatttcc aaaatctgca ccaaagcggc aatcacgccg
     3061 atgaaggtga tgaatttcaa aaaggtcaaa tccacgcctt cgacaatcgc gccgtctttg
     3121 agcagcgagt aaacgagttg gttgacaggg acggacagcc cgagtacgaa aattaccgcc
     3181 acacccaaac cgaatgcggt ggatactttt ttggataccg ccaaaaacgt gcacataccc
     3241 aaaaagaagg atagtgccat attttcaatg aagacggatt tgatgaagag gctcaaatag
     3301 tgttccatag cttattcctc cgcctgttcg ggtttccagg tacgcagtcc ccaaatcaaa
     3361 aagccgatga tgaagaacgc gctgggggcg agcaggaaca agccgttggt ctgataccag
     3421 ccgccgtcct gcacggtttg gaaaacggtg tagcccaaga gtttgcccga gccgatcagt
     3481 tcgcggacgg tggcgacgac aagcagcatc atcccgtagc ccgcgccgtt gccgatgccg
     3541 tcgatcaggc tttccagcgg cggctctttc atcgcaaatg cttcggcgcg gcccatcacg
     3601 atacagttgg taataatcag accgacgaat acggaaagct gtttggacaa ttcgtaggca
     3661 aatgcctgca agagttggtc gaccagcgta accagcgacg cgataatcgc catttgcacg
     3721 ataatacgga tgctgttggg gatgtagttg cgtaccagcg aaatgaagaa gctggaaaaa
     3781 ccggttacca aagctacgga aatacccatc acgatggccg tctgaagttt ggtggtaacc
     3841 gccaaagccg aacaaatacc caaaacctgc aaggcaatcg ggttgttgtc gataaagggt
     3901 gaaaacatca aatgtttcaa gcgtttcata tcagccatta ttgcgctcct gctgatttca
     3961 atttgttcag gtaggggata tagccgtttt cgccgaacca gtaggcgaac gaaccttgca
     4021 cgcctttgga tgtcagcgat gcgccggaga gggcatctac gccgtgttct ttgtccgaac
     4081 ccgcgccttt gccgacgtgc agggcgagtt tgccttgtcc gtcaaacagt tttttgccga
     4141 cgaatttttg ctgccacaac ggattgccga tttcgccgcc caagcccggg gtttcgcctt
     4201 gttcgtagta ggtaatgccg ttgatggtgt tgccgtcggg ctggatggcg acaaagccgt
     4261 acatgaccga ccacaaaccg ttaccgtgca taggcaggat gatttgcccg attttgccgt
     4321 cttcgccttt taccaaataa acctcggtgt atttggcacg gcttttgatg cctgccaaat
     4381 cgtcttcggg tttgatgcgg atgctttggg cagggtcttt gcctgcgatg cgcgcgctga
     4441 agtctttagg cgcatcggcg acgtattcgc cggtcgccaa atcgacaaca cgttgctcga
     4501 tacgctcggc aaaggtttta ccgatgtcgg tgtccttatc catcaaaccg gctacgctca
     4561 agatatagcc ttgtttgtct tggagttttt gtttctcttg gatgggtttc aagccgacga
     4621 ccgcaccggc aacgatgacc gagcaaatca ggctgaccgc caacacgaca atcagcgtac
     4681 cgctgaagct gtctttatcg aatttcttag ccattgctgc gcgcctttct gcgtttgatg
     4741 ttcgcttgtg cgacgaaata gtcgaaaatc ggggcaaaca ggttggcaaa cagaatcgcc
     4801 aacatcatgc cttcggggta agccggattg accacgcgga ttaatacgca catcacaccg
     4861 atcagtgcgc cgtaccacca tttgccgaca ttggtaaagg aagcggaaac ggggtcggtc
     4921 gccataaaca gcataccgat ggcgaagccg ccgacgacca aatgccagta ccaaggcata
     4981 gcaaacatag cgttggtgtc cgaaccgatg aagttgaaca gcgaagacat cgcaatcata
     5041 ccgatcatca cgccggcaat aatgcgccaa gaagcgatgc gggcaaacac gataaacgcg
     5101 ccgccgatta agagtgccaa agtggagact tcgccgatgg agccgggcag tttgccgata
     5161 aacgcgtcca tccaagtgat ggtttgaccg gttacggcgt ttttcaggcc gtctgcaccg
     5221 tgtgccgccc attgcgccag cgcggttgcg ccggaatagc cgtcaaccgc cgtccaaacc
     5281 gcatcgccgc tcaagttggc ggggtaggcg aagaacagga aggcgcggcc tgccagcgca
     5341 gggttcataa agtttttacc cgtaccgccg aatacttctt tcgcaaccac aacgccgaaa
     5401 gaaataccca aagccgcctg ccacagcggc agcgtgggcg gaacgattaa ggcaaacaga
     5461 atcgaggtaa caaagaaacc ttcgttgatt tcgtgtttgc gcacggtggc gaacaagact
     5521 tcccagaaac cgccgacggc aaatacggtc gcgtaaatcg gcaggaagta aatcgcgccg
     5581 aacagcattt tgcccaacac gctcgcttca gacgacatat tgatgcccaa agcgtcggca
     5641 agggtgtaat gccagtcgtt ggcgatgttt tgttgcagca aatcaggcgt taacgcaccg
     5701 aatgcctgta cgccgacgtt gtacataccg tagaacatgg cagggaacaa agccagccac
     5761 accaaaatca tcatgcgttt ggagtcgagc gcatcgcgga cgtgtgccgc tttgcgcgtt
     5821 accgcaccgg atgtatagaa aatcgtcgcc gcagcttcgt agagggcata ccatttttca
     5881 tgtttgccgc ctggcaggaa gtgcggttcg attttttcca gaaaatgttt caagcccata
     5941 atcagccttc cttctcaatg gtttccagca ccttacgcaa cagcgggccg tattcgtatt
     6001 tgcccgggca gacgaagctg cacaaagcga ggtcttcttc gtccaattcc aagcaaccca
     6061 atgcctgcgc gctgtcggta tcgccgacga ttaaatcgcg caaaagcagg gtaggcagga
     6121 tgtctagcgg cattacgcgc tcgtaagtac caatcggcac catggcgcgg tcgccaccgt
     6181 tgacggctgt cgtgaacttg aagagtttgt ttttcaggaa atgaccgagg gtcgtacgcg
     6241 tgatcgagta tttgtccggt tgtggcgcaa cccagccgaa cagttcttta ctgcggcctt
     6301 cttcgataac ggaaatctga ttgtggtagc gtcccaaata atcgtgcgcg ccttgtgcaa
     6361 tcgcgccgtt caataccgaa ccggaaatca cgcggttgtc tgcgtcaacc aattcgcccg
     6421 cagtaatttg cgatactttc gcacccaaaa cggtacgcaa gaggcgtggt ttgttgactt
     6481 gagaaccacc caaggcaacc acgcgctcgg tgttcagacg gcctgttgca aacaaacgtc
     6541 cgatggcaat tacatcttga taattgatgg tccaaacggt tttgttcgca ccgacaggct
     6601 caatgaaatg aatgtgcgtg ccactcaaac cggcaggatg cgggccgcca aattcatgag
     6661 tttcgatgtt ggcggcgttt tcagacggca cgtctgcgcc tgctgcttta cacacatgga
     6721 ttttacgctc ggtcaaacgg ctcaatacca gcaaacctcg tctgaaatcc tcggcggctt
     6781 ctttgatcac aaccacaggg tctgccgcca gcggattggt gtccatcgca ttgacgaaga
     6841 tggcgaacgg cgcggcatcg acggcaggga ttttgctgaa cggacgggta cgcagcgcag
     6901 tccacaaacc ggattggatc agattgcggc gcacttcttc gccgcttaag tttgccaacg
     6961 cttcgggtgc gtagcgttca aactcgattt cgtcgttgcc ttcaacggca atcacgactg
     7021 actgaagtac gcgcttttcg ccgcgatgga tggcggcgat tttgccagaa gccggcgcgg
     7081 taaacaccac gcccggattc tttttgtctt caaacagcac ttggcctttt ttgacggcat
     7141 cgccttcctt gactttcatc gaggggcgca taccggcata ttcttcgcca agcaacgcga
     7201 cttcggtaat ggccgggccg tcataaatga cttgctccgg tctgcccgcg atgggcaggt
     7261 ttagaccttt tttgatttta atcatatatt tgcattactt gtgatggtta aggtaaaaac
     7321 ggcgtgtttt gataccgtgt cgcgtggcat caaaagcatt gaataaatta atgtagcaaa
     7381 gtgttagatt ctatcaggaa ttgtacctgt ttgtcagatt tgctgctttt ttccttgcgg
     7441 aagccgtttt tatagtggat taaatttaaa ccagtacggc gttgcctcgc cttgccgtac
     7501 tatttgtact gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actataattg
     7561 tcggaagggg ggatattgat ttgattatgc cggaatttaa aatgccgtct gaatgttcag
     7621 acggcatagc gtttacagca gtttgaaaac gaaaaagata agggtatgta cgatgaagac
     7681 gggtgtcagg aaggcgaccg accacatcat atagccgaag aaagtcggca tcggtacgcc
     7741 gcgctgttcg gcaatggcct tgaccatgaa gttcggtgcg ttgccgatgt aggtcagtgc
     7801 gcccatgaat accgaaccca tagaaaccgc cagcagcgaa tgaaacaggg tacccgtcat
     7861 caaggcttgg gcatcgccgc ccgccatatt gaaaaaaacg agataagtgg gcgcgttatc
     7921 caagaatgcc gacaatatgc cgctcatcca aaaatacatc acattaatcg gatgacctgc
     7981 cgtatcgtga accagcgata ccaccccgcc cagcgcgcct gcctcgcctg ctttcagaat
     8041 gctcaggacg ggaaagatgg tgatgaagat gccgaggaag agtttgccca cttcggcgat
     8101 gggttcaaag ttgaattcgt tgcctgcgcg gacttgtttg ggcgtgattg ccatagatac
     8161 ggcggtcaat gcaatcagga tgacatcgcg gacgaggttt tgcagggcgt aacggctgcc
     8221 gaggatttca aatcccgggt gttcgggttt ccaaaggccg gacattagaa ccgcgccgac
     8281 cacgcccgaa agcaggagga agttccattt gccgaagatg gcgatttttt cgggtttttc
     8341 ctgttgtgcc ggcgtatctt gtgcaatgct ttcctgtttg aagaaacggt tgtcgatgaa
     8401 atagaaggcg gtcaacagga cagcggtgct gatcaggacg ggggcgaaca tatgtttgac
     8461 cgtccacatg aaatctacgc ctttgaggaa gccgaggaag agtggggggt cgcccaaagg
     8521 ggtcagaccg ccgccgatgt ttgcaaccaa gaaaatgaag aagatgacga tgtgcacgcg
     8581 gcgggtacgg ttttggttgg ctttcagcag cggacgaatc atcagcattg ctgcgccggt
     8641 cgttcccatg atagaggcaa gtgcagtacc gacggcaagc agggcggtgt tgagcttggg
     8701 tgtgccgttc aagtcgcccc aaaccaaaat gccgcctgaa atggtgtaca gggcaagcag
     8761 cagcaggatg aaggggatgt attcttcaac gagtgcgtgt gcgacggtat ggataccggc
     8821 ggacgcgcca aaaaccaaac tgaacgggat gaggaagagc aatgtccaaa aggcggtaat
     8881 tttgccgtaa tggtgatgcc aggtatgcga aaaaaacaag ggacccaatg cgatagacag
     8941 caaaatcagg gcaaagggca ggccccacag caggtttagg tttgcgccgt ccaaatctgc
     9001 ggcgtaaacc gatgctggga aaagcattag tgaaaacagg ggtaggtggc gcatcgtgtt
     9061 tcctcgattc aagcactgcc ttgcgcggcg cgtgggagtg atacaggcac cgtgccgccc
     9121 ggacataggc ggactgtgct gcctgtttgt ttttgaaaaa agttttccga ttgattgtaa
     9181 agtaaataat caggataaac cagtttccca aaccggaagg cggcgggaag gcggattgcc
     9241 gtgcttggga atatatgttc tttttgataa ataattttat ttaaaacaaa taaatatatg
     9301 tctttaataa ataatctatc gaaaacgaaa aatgaattta ttttaacata tatttgcaat
     9361 gaaacaggtt tgccccccgt ttgtttgccc ttatcccttt cagtacggca ttcaagattc
     9421 gggcctgcgc cacatccata tggcgacaag ggaacaaaaa accgatgaaa ccgccccgac
     9481 ccaccagcgt tggggaaact gccaaaacat tatcaggcag gatgcggtca tcatactgat
     9541 ggcgaatatt ttggctttgc gcggcactgc gccgttttgt tcccagttat gaaccatcgg
     9601 accgaaatag cggtgccggt gcagccagcg gtgaaagcgc ggggatgcct ttgcccagca
     9661 ggcggcggag agcagtacga acggcgtggt cggcaacagc ggcaaaaaaa tgccgatgat
     9721 acccaacagc agggaaatgc agccgcaggc aattaaaaga taacgtatca ttttgaaata
     9781 tttttcttat tgtgcggata agggcaggat gtgataccga gttttgccca gccttcatgt
     9841 cccatttttt ccagcagggc gatattgcgt tcgaatattg ccgaagcgtc gggaaaggct
     9901 tgtgcggctt tggcaatgct gtcttcgcgg atcagatgca gtgtcggata gggagaacgg
     9961 ttggtgtagt tgccgatgtc gtcgggttcg gtattctgaa agcggaattg gggatggaac
    10021 ggtgcgattt ggaggatgcc ttccaagccg ttttcgacaa cggcggcatc ggcaatatcg
    10081 agcatatcgt tgaatacgtc gaaatcgggg aatagggtcg ggtgaaccag cagggtggtt
    10141 tccagttcgg tggcgggtgt attgcccagt cgctgcagtt cttcgtccaa gtcttccaaa
    10201 aaaccgtcaa ggtgtttggc ttcgctgatc gcgatgcgga caaggttttt aacgtggggg
    10261 gctttggcaa agggacacag gttcagaccg atgacggctt tttccaacca ttgtccggtg
    10321 tgttcggcaa cagcatcttt attttcggaa gtattgatat tcattattgt catgtaaatg
    10381 tgtttgcaga ttgcacgtgc gggaaaatcg ggaagggcac tattccttca gcaggtggtt
    10441 gagtggcagg gaggtggtgt gtttgatttc ttttaaaaca aagctcgatt gggcatcctg
    10501 tacgccgtgg tgggacagga gcgtatccaa aacaaaatgg gaaaacgcgt tcatatcggt
    10561 aaaaaacgcc tgaagcaggt agtcggtttc ccctgtcagg gcgaagcagc tcaagacttc
    10621 aggccatttt cgaaccgatg cggcaaagtc ttcccgcgcg tcttttgctt tgcggatgga
    10681 aacgcggata aatgcctgaa gccccaggtt gacggattcc ggagacagca gcgcggcata
    10741 ttggcggacg atgccggcat cttccaactg cttcagacgg cgcaggcacg gagaaggcga
    10801 aagtgcgaca cgttcggaca gttcgacatt ggtcagcctg ccgttttcct ggagaacctg
    10861 taagatttta atatcggttt tgtctaaagt gagttggggc atatttgcgt tccgttttaa
    10921 ggaattcgga ttgtctgtcc gtatgtttgc ggcaatccgc acagatggag accatattaa
    10981 catataaaaa gttataccgt catccgggac aaattttgtt ttcggaaaat catgtgaaaa
    11041 cagaggcggt cggtttgcat ctcttttaag acggcttgcc caaaccgccg attcaagaca
    11101 taatcgggaa atgtgcagga gagtgttaca cccaactaca atgtaaccac cgaaggcgca
    11161 gacaccctta aatcgctcag gtatcaggga ctgcacattg aaacaaacaa tctggagagc
    11221 ggcgttggaa taacgtccac cgaaggggag aaggccgtct gaaccaccat tcagacaacc
    11281 gcgcaaagca gtgagcagac tggtttgcca tcatgcggat acggccgaaa atctcaggtt
    11341 caaggacaga tagggtcatc cgcgcacagg tgcgcgggtg gcatctgaac aaaaaatccg
    11401 gagaaacttg agaatgatta ctctgaaaac caccccattt catcaagccc atcaagatgc
    11461 aggcgcgaag ctggtagatt ttgccggctg ggagctgccc atccattatg gttcgcaaat
    11521 cgccgaacac gaagccgtgc gcaccgacgc aggtatgttt gacgtatccc atatgcttgt
    11581 taccgacgta gcaggcgcaa atgccaaagc ctttttccgc aaattgattg ccaacgatgt
    11641 cgccaagctc gcttttgtcg gcaaagccct ttattccgct ttgctcaacg acaacggcgg
    11701 cgtgattgac gacttgatcg tttaccgcac caatgaagcc gaaacccaat actgcatcgt
    11761 gtccaacggc gcgactcgcg aaaaagatac ggcacaattc cacaaagtcg gacaagagtt
    11821 cggcgtttct ttcaatccgc gctacgacct cggcatgctc gccgtacaag gcccgaaagc
    11881 catcgagaaa ctcctgaccg tcaaacccga atgggcagat gtcgtcaaca acctcaaacc
    11941 gttccaaggc gcggatttgg gcaacgactg gtttgtcgcc cgcaccggct acaccggcga
    12001 agacggcgtc gaagtcatcc tgcccggcac cgaagccgtc gcattcttca aagccctgca
    12061 acaagccggc gtacaaccct gcggcctcgg cgcgcgcgat accctgcgca tggaagccgg
    12121 tatgaacctc tacggcaacg atatggacga cgacaccagc ccgctcgaag caggcatggg
    12181 ttggacggtt gatttgaaag acgaaagccg cgattttgtc ggtaaagccg ccttgctggc
    12241 attgaaagaa aaaggcgttg ccgtcaaaca ggtcggtctg ttgctcgaca aaggcggcat
    12301 cctgcgcgcg catatggaag tgttgaccga caaaggcaaa ggcgaaacca ccagcggcgt
    12361 attctctcca agtctgaaac aatccatcgc catcgcccgc gtgccgaaag actttgacgg
    12421 cgataccgcc aaagttctga ttcgcggcaa agaagtggac gtacgcgtac tgaagctgcc
    12481 gtttgtgcgc aacggacaga aacagtttga ttgatgcggt ttcagacggc attttcattt
    12541 catatgccgt ctgaaagcag gttttaattg ttgtccgata cggacgtttg tagaaagcat
    12601 tgaacaaggc atctgtggat attgattcat gcagatgccg tctgaaaata acccctatca
    12661 atgagtatca aaccatgagc aacaacatcc cggccgaact gaaatacgtt gccagccatg
    12721 aatggctgcg ccttgaagaa gacggtacga ttaccgtcgg cattacccac cacgcgcaag
    12781 agctgttggg cgacatcgtg ttcgtcgagc tgcccgaagt cggcgcgaac cttgccgctg
    12841 aagagcaagc cggtgtggtt gagtctgtaa aagccgcgtc cgacgtgtac gcaccgattg
    12901 caggcgaagt cgttgccgtc aacgaagatt tgccaagtgc tccggaaact gccaacagcg
    12961 attcttacgg cgcaggctgg ttcttcaaaa tcaaacctgt caatcctgcc gattacgacg
    13021 gtctgctgac tgccgaacaa tacgcgggcg aagtggacta aatctctatc ctgataatgg
    13081 gatgactgat ttgagaaact gcactttcag acggcaagga tgcgtttgga agtgcagttt
    13141 ttgtctgtgt cttcaaagtt cagttaggct ataataacgg tctatattca tctttaccga
    13201 ttttttcatg caacttaccg ctgtcggact caatcatcaa accgcacctt taagcatacg
    13261 ggaaaagctg gcgtttgccg ccgccgccct gcctaaagcc gtccgcaatc ttgcccgaag
    13321 caatgcggca acggaggcgg taatcctttc tacctgcaac cgcaccgagc tttactgcgt
    13381 cggtgattcg gaagaaatca tccgatggct tgccgattac cacagtttgc cgattgaaga
    13441 aatccgtccg tatctgtacg cgctggatat gcaggaaacc gtgcgccatg ccttccgcgt
    13501 tgcctgcggc ttggattcga tggtgttggg cgagccgcag attttaggac agattaagga
    13561 tgcggtcagg gttgctcaag agcaggaaag tatgggtaag aaactcaatg ccctgttcca
    13621 aaaaaccttt tctgttgcta aagaggtccg taccgatact gccgtcggcg aaaactcggt
    13681 ttccatggct tccgcttccg tcaaattggc ggaacagatt tttcccgaca tcggcgattt
    13741 gaatgtcttg tttatcggcg caggcgaaat gattgagctg gttgccactt attttgccgc
    13801 caaaagtccc cggctgatga cggttgccaa ccggacgctg gcgcgtgcac aggagttgtg
    13861 cgacaagctc ggtgtcaacg ccgaaccgtg cctgctgtcc gatctgcctg ccattctgca
    13921 cgattacgac gtagtggttt cttcaacggc aagccagttg cccattgtcg gcaaaggcat
    13981 ggtggagcgt gcattgaaac aaaggcagag tatgccgttg ttcatgcttg atttggcagt
    14041 gccgcgtgac attgaagcgg aagtcggcga tttgaatgat gcctatcttt atacggtgga
    14101 cgatatggtc aacatcgtcc aaagcggcaa ggaggcaagg cagaaggccg ccgccgccgc
    14161 cgaaacgctg gtatccgaga aggttgccga atttgtcagg cagcagcagg gcaggcagag
    14221 cgtccccttg attaaagcct tgcgggacga gggcgagaaa gcgcgcaagc aggtgttgga
    14281 aaatgcgatg aaacagcttg ccaaaggcgc aacggcagaa gaggttttgg aacggctgtc
    14341 cgtccaactg accaacaagc tgctgcattc gccgacccaa actttgaata aggcggggga
    14401 agaagataaa gatttggttc atgccgtcgc gcagatttat catttggaca aataacggtg
    14461 cgccggaaaa ggatgccgtc tgaaggggtt tcagacggca tatttttgtg ctgtctgaca
    14521 acatcgtgaa atcccacatt atatcgatgt aatcacaaag tatagtggat taacaaaaat
    14581 caggacaagg cgacgaagcc gcagacagta cagatagtac ggcaaggcga ggcaacgctg
    14641 tactggttta aatttaatcc actatattat cccgtatgcg gattggtttt aagatttgta
    14701 aatttgattt gcatcaaaaa atcgccgata gatgattcat ataatatcaa tattaaagag
    14761 tatcggtata tcggggatag tcatgtcctg tttttcaatc aaacgtatgt ccgcgtttcg
    14821 ggcgcggata acggcgtttt ttgccgcctt tgtctttttg acggcggcac tgcccgctta
    14881 tgcggagcgt ctgcctgatt ttctggcgaa aatacagcct tcggaaattt ttccgggtgc
    14941 ggaccgttac ggcaagccgg aaggtaagcc tatggttgcc cgcgtttaca aaggcgatga
    15001 gcagctcggt ttggtctata tcacaaccga tgtggtcaat acgcgcggtt attcgagcaa
    15061 accgattgat acgctgatgg cgttggctaa agacggtacg atagccggag cgaaattggt
    15121 tgatcaccat gagtcgatta tgctgatcgg tatcccgcat ttgcccgcgc ccgggcgggc
    15181 gatacgctca aactggcttc cggcgtatat caaaccaaac ttcacatcga caaaccgatt
    15241 acgattgaag ggcctgccga ccgttctgca accatcgaag gagacaggag cgggcgtacc
    15301 atagccgtac acgcgccgga cgtaacgctc cgcaacctga ccgttacccg ttccggtatg
    15361 agcctgcccg caatggatgc cggtatttat ctcgaagaaa ctgccccgcg cgccctgatt
    15421 gaacacaata atattttgga taattcggtc ggcgtctatc tgcatggttc tgccgatgcg
    15481 atggtgcggg agaataaaat cgtcggcgac gcgactttgc gcgtgaacga gcgcggcaat
    15541 ggcgttaccg tttggaacgc gcccggcgcg caggtcgtcg gcaacgatat ttccaaaggg
    15601 cgggacggca ttttttccaa taccagcacg cacaacacct ataaaaacaa ccgcttcagc
    15661 gatttgcgtt tcgccgtcca ctatatgtac accaacgaca gcgaaatcag cggcaatatt
    15721 tccgtgggca acaatatggg ctatgtgctg atgttttccg agcggctcaa agtgtttgac
    15781 aatatcgccg tcggcagccg cgaccaaggc atcatgctca actatgtcaa ctattccgat
    15841 attcacgaca acattatcaa caaagcgggc aagtgcgttt ttgcctacaa tgccaactac
    15901 gataaactgt ccgccaatca ttttgaaaac tgccaaatcg gcatacactt taccgccgcc
    15961 atcgaaggca cgtcactgca cgacaattcc tttatcaaca acgaaagcca ggtcaaatac
    16021 gtcagcacgc gctttctcga ctggagcgag ggcggacacg gcaactattg gagcgacaac
    16081 agcgcgttcg atttgaacgg cgacggcttc ggagacagcg cgtaccgtcc caacggcatc
    16141 atcgaccaaa tcatctggcg cgcacccgta tcgcgcctct tgatgaacag tcccgcaatc
    16201 agcatcgtca aatgggcgca ggcgcagttt cccgccgttc tgcctggcgg cgtggtggac
    16261 agcaaaccgc tgatgaagcc ttatgccccc aaaattcaaa cccgttatca ggcgatgaag
    16321 gacgggctgc tcaaagaagc cgaaacgcgg cagttggaat ggggcagggc ggaaaacggt
    16381 tctttgaact agtctgtttc agacggcatc cggattcaaa tgccgtctga aaacacaaaa
    16441 ggaaaaacca tgaccacaca tcatgtcgaa ttgaggaatg taaccaaacg gttcggggcg
    16501 caaaaagcgg tcaaccaagt tgatttggtt ttgaaggcag gagaaagcgt cgggcttgcc
    16561 ggacacaacg gcgcgggcaa gtccaccatt atgaagctga tactcgggct gattaccccg
    16621 accgaaggcg aagtgatgct tttgggcgaa cgtaccggta gcaaagcggg ggcgcggctt
    16681 cgcagccaaa tcggctacct gcccgaaacc gttgcgctgc ccccttcgct gaccggcatc
    16741 gaaacgctgg atttttatgc caaacttaaa aaacagccgc tcacgcagaa ccgggggctg
    16801 cttgagcgtg tcggtatttc acaggcggca caccgccgcg tcggcactta ttctaaaggg
    16861 atgcgccaac gccttgcctt ggcacaagcc ctgctgggcg agcccaaagt cctgctgttt
    16921 gacgaaccga caaccggcct cgaccctgca tcacgacaaa tgttttacga agtcgtgcgc
    16981 gaactcaacg ggcgcggcgc gaccgtattg ctcagcaccc acgcccttgc cgagttggac
    17041 ggacacgccg accgcattat cgtggattaa atttaaacca gtacggcgtt acctcgcctt
    17101 gccgtactat ttgtactgtc tgcggcttcg ttgccttgtc ctgatttttg ttaatccact
    17161 atatgcgggt atggcgggtt tgagcggaca aatcagcctg accgtccccg ttttgctgac
    17221 cgctcaggtt ttatgggtta tcattccgct tgttttggca gccggaattt ttagaaagcg
    17281 acaaatatga aaaaaaccct gttggcaatt gttgccgttt ccgccttaag tgcctgccgg
    17341 caggcggaag agggaccgcc gcctttaccc cggcagatta gcgaccgttc ggtcggacac
    17401 tattgcagta tgaacctgac cgaacacaac ggccccaaag cccagatttt cttgaacggc
    17461 aaacccgatc agcccgtttg gttctccacc atcaagcaga tgttcggcta taccaagctg
    17521 cccgaagagc ctaaaggcat ccgcgtgatt tacgttaccg atatgggcaa tgttaccgat
    17581 tggacgaatc ccaatgccga cacggagtgg atggatgcga aaaaagcctt ttacgtcatc
    17641 gacagcggct ttatcggcgg tatgggtgcg gaagacgcgc tgccgttcgg caacaaggaa
    17701 caggctgaaa aatttgcaaa ggataaaggc ggtaaggttg tcggtttcga cgatatgcct
    17761 gatacctata ttttcaaata atattgaaaa aaccggccga aactttaaaa acgagtttcg
    17821 gtcggttttt cttttcttgt tcggtatagt gtcggcagga aagaaccttc acatcccgcc
    17881 gtaattcggc ccgctcgcgc cttcggggca aatccaagtg atgttttgcg tcgggtcttt
    17941 gatgtcgcag gttttgcagt gcacgcagtt tgccgcgttg atttgcaggc gcggattgcc
    18001 gttttcttca acaatttcgt acacgccggc cggacaatag cgcgtttcgg gcgaggcgta
    18061 ttctttgtag ttcacgtcta tcatcgtttg cggattgttc agcaccaaat ggtcgggctg
    18121 gttttcttcg tgcgcgagat tggcaaggaa gacgctgctc aagcggtcga aggtcaacac
    18181 gccgtcgggt ttcggataat caatcggttt gcacgcggcg gcttttttga gctgctcgtt
    18241 gtctttgccg taatgtttca aggtccacgg ggctttgcct ctgaaaatca tctggtcgat
    18301 gccggtatag attgagccga ggtaaacgcc ccatttgaat gacggacgga cattgcgcgc
    18361 ggcgtaaagc tctcgataca gccagctttg ttcaaaacgt tgctgataat ccgccgcttc
    18421 tttgccgctg tcgaaaccct ccgcttcttc aaggtgttcc aacaagggga acacggcttc
    18481 ggcggcgatc atagcggatt tcatcgcggt atggatgcct ttgatgcgcg gcatattgag
    18541 gaaacctgcc gcatcgccga ttaaaacgcc gcctttgaac gagagcttcg gcaaactttg
    18601 caaaccgcct tcaatcagcg aacgcgcgcc gtaagcaatg cggcggccgc cttcaaaggt
    18661 tttgcggatt tcgggatggg ttttgaaacg ttggaactct tcaaacggcg acagataagg
    18721 attttgatag tccaaaccga ccacgaagcc gacggcgact ttgttgtcgt cgaaatggta
    18781 aacaaacgcg ccgccgtagg ttttgctgtc cagcggccag cctgcgctgt gcaccaccaa
    18841 accgggctga tgctgttcgg acggcacttc ccaaacttct ttcatgccca agccgtaagt
    18901 ttgcggctgg ctgttttggt cgagtttgaa gcgttcgatg atttgtttgg aaagcgaacc
    18961 tcggcagccc tcggcaaaca gggtttgccg tgcccaaagc tccatgccgg gctggaatga
    19021 atcggtcggc tcgccgtctt tgcccacgcc catattgccg gtcgcaatgc ctttgaccga
    19081 accgtcttcg tgatacagta cttcggcagc ggcaaagcca ggatagattt ccacgcccat
    19141 attttccgcc tgctccgcca accagcgcac gacttcgccc aagctgacga tgtagttgcc
    19201 gtgattgtcg aaattcgggg taataggcag attgaacgcc tttttcttag tcaggaacaa
    19261 tactttgtcc tgcgttaccg tacgcgtcag cggcgcgcct ttttctttcc aatcgggaat
    19321 cagctcgttc agcgcaatcg gatcgataac cgcgcccgcc agcgaatgcg cgcccgtctc
    19381 agaacctttc tccaccacgc aaacgctgat ttcgcgcccg ttttgttcgg caagctgctt
    19441 gagtttgatg gcggcagaca aacccgacgg gcctgcgccg acaatcacga catcgtattg
    19501 catactgtcg cgggtgatgg attctgtcat ggcggttcct gtgtatttat tattgaattg
    19561 caaatccgta attatacaac gggaacatat agttaccaaa tacaacaaag gtcgtctgaa
    19621 aaccatattt tcggttttca gacgaccttt gtcgaaattt caataagcac gccaccattt
    19681 tacctgtccg accgcaaact ccgtctgacg tttcggactg cgtgtgaaaa acgccttatc
    19741 cccgccggca tccctccctt tcggcacaac cgccaaaatc ttacctgcca aatttccctc
    19801 acgggtttgc caagcatcca aaaactgcgc cctgctcatc gaaacatgac ccagcgacgg
    19861 gtcggcaagc aaaaccgtat tgccgtctat accgcgcaat accgagaaat gatcatcctt
    19921 acggtatttc agatacacga tgacggggat tttcaactgc gcgagctgct cgaaagacag
    19981 ggcatagcct ttcgcttcaa aacccaaatc tggcataatg cgccgcatat cctcaaacga
    20041 cgcgcgcatc tgctccttat ccagcttttt caacacttct tcttccgtca gcgtttgccc
    20101 gtaaaaattg ttcaaaagcg tcgccaccga agccgccccg caggaaaaat ccaaatc
//
LOCUS       DBBZYD010000031        19661 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.031, whole genome shotgun sequence.
ACCESSION   DBBZYD010000031 DBBZYD010000000
VERSION     DBBZYD010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19661
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.031"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(383..595)
                     /locus_tag="ACJJDL_000906"
     CDS             complement(383..595)
                     /locus_tag="ACJJDL_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HGG7573648.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWTEKTNAV"
     gene            complement(607..888)
                     /locus_tag="ACJJDL_000907"
     CDS             complement(607..888)
                     /locus_tag="ACJJDL_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573649.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDSEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(935..1138)
                     /locus_tag="ACJJDL_000908"
     CDS             complement(935..1138)
                     /locus_tag="ACJJDL_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573650.1"
                     /translation="MNIIEQEMKHSSLRKVDAEIAKIIADAHKINAESVKIAQESRWY
                     PMMAATGLVTAIAAVLALIFKFA"
     gene            complement(1218..1790)
                     /locus_tag="ACJJDL_000909"
     CDS             complement(1218..1790)
                     /locus_tag="ACJJDL_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HGG7573651.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            complement(1765..2109)
                     /locus_tag="ACJJDL_000910"
                     /pseudo
     CDS             complement(1765..2109)
                     /locus_tag="ACJJDL_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(2102..2977)
                     /locus_tag="ACJJDL_000911"
     CDS             complement(2102..2977)
                     /locus_tag="ACJJDL_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HGG7573652.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHGISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(3022..3312)
                     /locus_tag="ACJJDL_000912"
     CDS             complement(3022..3312)
                     /locus_tag="ACJJDL_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7573653.1"
                     /translation="MAESKRVQRLLRVFITLDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3324..3527)
                     /locus_tag="ACJJDL_000913"
     CDS             complement(3324..3527)
                     /locus_tag="ACJJDL_000913"
                     /inference="COORDINATES: protein motif:HMM:TIGR04111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7573654.1"
                     /translation="MLSQWERAIYGYTVEKLKENFAQNGQTLAQWARENGFKPRDVYL
                     VVGGQRKGNYGKGHEIAKKLGLK"
     gene            3617..3994
                     /locus_tag="ACJJDL_000914"
     CDS             3617..3994
                     /locus_tag="ACJJDL_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7573655.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            4023..4268
                     /locus_tag="ACJJDL_000915"
     CDS             4023..4268
                     /locus_tag="ACJJDL_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573656.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
     gene            4502..5470
                     /locus_tag="ACJJDL_000916"
     CDS             4502..5470
                     /locus_tag="ACJJDL_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573657.1"
                     /translation="MAKKTTKTIHYLRAQQNHSLFDLEVALRRVLSAAPTVQDTQIEQ
                     YNQLTQIMHRTLDPKDVKGNSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPP
                     SGYSFLRKEAFLYIVGHHVIFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFK
                     AVGNCDKLSLIQQHGVKSILLDASAYQLSRNRLYQDSRSTIAKALGKVGSVFTSELSD
                     EELEAQSEIHINLEVLLNGNSRASIEAQSLMQEQAEEIIDDETVNQGFSITTQQGEVI
                     QPSDVKLSKSVRIGRYDEANSLLPDSAFTAISEYFLELQSRNLTEQ"
     gene            5467..5949
                     /locus_tag="ACJJDL_000917"
     CDS             5467..5949
                     /locus_tag="ACJJDL_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573658.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNLIKSRKEEFKKLMEKKKPKI
                     "
     gene            6039..6542
                     /locus_tag="ACJJDL_000918"
     CDS             6039..6542
                     /locus_tag="ACJJDL_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HGG7573659.1"
                     /translation="MSDKFNQFINRVLSHEGGYANHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAISIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     AAADNAD"
     gene            6651..6983
                     /locus_tag="ACJJDL_000919"
     CDS             6651..6983
                     /locus_tag="ACJJDL_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573660.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAAVPQLAEVKKS
                     ANQEGGRQ"
     gene            6980..7390
                     /locus_tag="ACJJDL_000920"
     CDS             6980..7390
                     /locus_tag="ACJJDL_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HGG7573661.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            7395..7943
                     /locus_tag="ACJJDL_000921"
                     /pseudo
     CDS             7395..7943
                     /locus_tag="ACJJDL_000921"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            7959..8144
                     /locus_tag="ACJJDL_000922"
                     /pseudo
     CDS             7959..8144
                     /locus_tag="ACJJDL_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(8461..8823)
                     /gene="ssrA"
                     /locus_tag="ACJJDL_000923"
     tmRNA           complement(8461..8823)
                     /gene="ssrA"
                     /locus_tag="ACJJDL_000923"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(8886..9491)
                     /locus_tag="ACJJDL_000924"
     CDS             complement(8886..9491)
                     /locus_tag="ACJJDL_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HGG7573662.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
     gene            complement(9882..10067)
                     /locus_tag="ACJJDL_000925"
     CDS             complement(9882..10067)
                     /locus_tag="ACJJDL_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573663.1"
                     /translation="MPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKMPSE
                     AVGATILIWGALHQRGA"
     gene            complement(10073..11128)
                     /locus_tag="ACJJDL_000926"
     CDS             complement(10073..11128)
                     /locus_tag="ACJJDL_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7573664.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGSSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKATNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSIVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            complement(11234..11716)
                     /locus_tag="ACJJDL_000927"
     CDS             complement(11234..11716)
                     /locus_tag="ACJJDL_000927"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7573665.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            complement(11763..12899)
                     /locus_tag="ACJJDL_000928"
     CDS             complement(11763..12899)
                     /locus_tag="ACJJDL_000928"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HGG7573666.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADRHLCAPFDNQTALEELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKSWIRKAGLQTAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHRGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFRQQVRIMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            complement(12896..13442)
                     /locus_tag="ACJJDL_000929"
                     /pseudo
     CDS             complement(12896..13442)
                     /locus_tag="ACJJDL_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
     gene            complement(13439..14914)
                     /gene="trpE"
                     /locus_tag="ACJJDL_000930"
     CDS             complement(13439..14914)
                     /gene="trpE"
                     /locus_tag="ACJJDL_000930"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HGG7573667.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPASEWQETQNKARAVIRAAQMVQEGLDK"
     gene            complement(15025..15390)
                     /locus_tag="ACJJDL_000931"
     CDS             complement(15025..15390)
                     /locus_tag="ACJJDL_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573668.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            complement(15411..17321)
                     /locus_tag="ACJJDL_000932"
     CDS             complement(15411..17321)
                     /locus_tag="ACJJDL_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7573669.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGKIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENETVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILILDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     IFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            complement(17340..17984)
                     /locus_tag="ACJJDL_000933"
     CDS             complement(17340..17984)
                     /locus_tag="ACJJDL_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG7573670.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            complement(18147..18964)
                     /gene="opc"
                     /locus_tag="ACJJDL_000934"
                     /gene_synonym="opcA"
                     /pseudo
     CDS             complement(18147..18964)
                     /gene="opc"
                     /locus_tag="ACJJDL_000934"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
     gene            complement(19551..>19661)
                     /locus_tag="ACJJDL_000935"
     CDS             complement(19551..>19661)
                     /locus_tag="ACJJDL_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7573671.1"
                     /translation="RAAYFGLLKVSAQSHLKAMCLNLLKAANKLSAPAAA"
BASE COUNT         4529 a         4433 c         5269 g         5430 t
ORIGIN      
        1 cgcaaaccaa acgcaaccgg tatttgtcga agacccgtta tgtggttgaa caaagcttcg
       61 gtacgctgca ccgtaaattc cgctacgctc gggcagccta tttcggactg atttgcgccc
      121 gctgccgcct aaaaggcagc ccggatgcct gattatcggg tatccgggga ggattaaggg
      181 ggtatttggg taaaattagg aggtatttgg ggcgaaaaca gctgaaaacc tgtgtttggg
      241 tttcggctgt cgggagggaa aggaattttg caaaggtctc agagtgagtt tattttgggg
      301 cggcggcagg tcgggggcaa gcggtgtggg gcttggttgt ggtttttagg tttttggggg
      361 taaaaaatgc cgtctgaact tttcagacgg cgtttgtttt ttctgtccaa tcgaggaact
      421 gccgccattt ttccagcggc atatcggccc gccgcgtttc ggtatcgggt tcggcttccc
      481 agcggcctac ctgtatgtag tgcttcaccc cgacgatttg cgccaactcg gcctgtgtca
      541 gtttgcagcg gttgcgcagg gtgcgaaggt tgtaaggcgt gtagccgagt tccatgtcgt
      601 tgcggtttat tttgtttcgc atattttttt gactgcccgg cggcaggttt cggtaaggac
      661 ggcggcaaat cgggcttcgt ctgccggttt tccgtcgaaa aaaataaaat cgtaaagggt
      721 gatgccgttt tcggaatggc ggtaatgccc gcccgggcat tcgctgtctg tctgcctgtg
      781 gattttggca atcaggcggg gatagcggca atgggtaatg aaacggcttg cgccgtcttg
      841 cccgataatc cattcggggt agcggttgaa tagtgcggct ctgttcattt tgttcgggtt
      901 gttcggggga taaagcccct cgcggggctt gtggtcaggc aaatttgaat atcagtgcca
      961 acacggcggc gatggcggta accagcccgg tggccgccat catgggatac catcgggatt
     1021 cttgggctat ttttacggat tcggcgttga ttttgtgcgc gtctgcaatg attttggcga
     1081 tttcggcatc tacttttctc agactggagt gtttcatttc ttgttcgatt atgttcatcg
     1141 tacttccttt cgtttttggc ggttgccgcc gcttgtcgga tggtaggatg tctgccatgt
     1201 gtatatattg atacctttta ggttttattg caagtgtttt gggcggcggc ttcgtatgct
     1261 tggcggtggc ggcggctgta ccattcggcg agttcgcgcc gctcttggag gcggtagctg
     1321 tcggcggtca ggtagtggtg caggcttgag aagccggcgc gttggagggc ggcgcggctg
     1381 atgtggccga gggcgaggtc tgttgtgagg gtgtcttttc cggcggtcag gctgatgttg
     1441 gtgaagaggt ggcggaatcc gtgcattgtg tgtttggatt tgccgggggt gctgccgtca
     1501 tagcccagtc gtcggatggc gttgtgggcg aatttgatgc tgatgtggtc gggatggggg
     1561 gcgggtttgc gccgtgggcg gatgccgggg aaaaggtgga tgttgtcgcc ggtctgtgtg
     1621 tgcagctctc ggagtatttc taccgcccag tccgacagtg ggacggtaaa ggggtgtttg
     1681 gtcttcatgt cggcggcggg gatgtgccat aaccgggcgg tgaggtcgat gtcttgccag
     1741 cgggcggaaa gcagtgcgga gggacgggat gacttccccg gtttccccat caatccgcgc
     1801 cgcctcgatt tttccgttgg cgcgcagcat ttccaccgcc tgccgcaccg acatcaaccg
     1861 cttgccgttg cgcctcatcg cctccaccaa aaccgccgaa atcaatttgg cttcttccgg
     1921 tttaagctcc gtcttgcccg catcgctgcg ccgtttgcgc gtcggcttga cgctgaccgc
     1981 ctccagcttg cggtatagcg tggcaaggct gatgcccaat tcctgcgcct gctgcttaag
     2041 atatgcagag cgtgcgccgc gttccattgc ttccgcctga ttctcgactg ccttaagacg
     2101 ctcaatcatt gccggattca tcgccttctc ccgtttcacc gcccaaccat tccggcacat
     2161 tgtctgtcgg tgcttcagtc ggcagggcat agctttcgcg cagttgctcg cagtccaaaa
     2221 taatttgatt gagcgtgccg accatctttg cctgatggct gatcccgtgt gcctcactgt
     2281 gcgcattaag ttggtcgaac aaatctttca gacggctcac ttgactgcgg ataccgacct
     2341 caaggcttgt taactgcatc gccaactcgc tgcctacgtc ttccgccttc ggctctctga
     2401 caacggtttg cttcttagcc agcttctcgg ccagctcatc aattttggct gttttggttt
     2461 tcatcacttc gtctttggcg gcgaggtttt cgcggctttc gcgcagggcg acgcgcagct
     2521 cgcgcaccgt cattcggtcc acatcgtcaa aggtcatgcc gttgacttct tccccttcgg
     2581 ccaaacccac cagcgtaacg tcttcttcga ccaagagttc cagcagcttc gacttgccca
     2641 aatccatcag cttcggcgcg gctttctgca tttgcggggt cgcaaagcgg cgagtggctg
     2701 acatcagacg tgatgtttct gcgataccca gcccaaattg gcttttcaca atttccataa
     2761 accgtccgtg ttccgtatgc tcttttaaaa taatcagcgc acgtcccagt tcgaacatgc
     2821 cttccatcgt ctgccgtact gcttgacgac cgcgttcaac ccaacgctct tcgctataag
     2881 tctcgccgtt accccactgc tccatcacca gcacactgcg catcgctgcc tgattgctta
     2941 ctttgtcggt tgcgataatt tcaatttctg tattcatttt ttatctccaa agtttccgac
     3001 gtcggaaact ttcaaaatcc gttaatccac atcgacccgc ttgccgattt cggcaatctt
     3061 gctttgcagc cgttcatgct gctgcctgaa ccgctctgcg atttgcaggg ttttgatgcc
     3121 gtaggcgtag ttgccgtttt caagtttgat gaccaatccc gaggcaacca aatcatcaat
     3181 atccctgctg acttgcgatg gcgtcagccc cagtccgacc gataaatcct tattgctcag
     3241 accgataatc ggatgctcgt caagcgtgat aaagaccctc aatagccgtt gtaccctttt
     3301 actttctgcc atccgcatcc tccttatttc agtcccagct tcttggcaat ttcatgcccc
     3361 ttgccgtaat tgcctttgcg ctgtccgccg accaccagat acacatcgcg cggcttaaag
     3421 ccgttctctc ttgcccactg cgccagcgtt tggccgtttt gggcaaaatt ttcttttagt
     3481 ttttcaacag tatagccata gatagccctt tcccattgtg ataaaatagt gaactattta
     3541 tgcactagaa attaattagt gcattaccaa tgcgtgaatt atgagatttt aaaatctctt
     3601 ttacaaggat tattttgtga tttctaaatc tctttttggt aatcgtttga aagaaaaaag
     3661 aaagttttta gggcttaccc aagcacaagc tgctgaaaaa gcaggtattg agcgcgaaac
     3721 atggggcaaa tacgaacgtg gcgtatttat gcctagtgga gatgtattgc tctctttttt
     3781 gaatatggga atagatgtga gcagcttatt tgctgctgaa cagggaatta ggccgtctga
     3841 aaattctgaa attagtaagg aagagtcaga gttattaggg tattaccgcc aagccagcga
     3901 taacggcaaa tttgtcattc tcagtgtggc aaaaggcgca gagaaaaaag cagccgaaaa
     3961 tactcaagtt tcagccacgc ataaaacagc gtgattttta aatccaaaat ggagacagtc
     4021 ttatgtttga ctttgaacaa caaatcaaat ggggtgagcg agcggaagaa atcgttaaag
     4081 aggcagccac ccagaacaat atcgaaattc ccgaaccttt ggcttcggca ttagctaagg
     4141 cggtaaaagt gcattatcta agccaagctg gtgtgttttc tttggtagaa gcctatgcag
     4201 acacggtaaa tccaactgaa aaagaagtag attaccaagc aatcggcaaa gagctatttg
     4261 aaaaataaaa aatgccgtct gaaattttca gacggcattt aggacactcc gacagtcggg
     4321 ctgctccggt gttctgaaac ggatattaag caattgaagc ggccgtgcat tttaaaacgc
     4381 attaaaaact accccgacat acaggtcatc gggcaggtgg ttcaggtgtt gaaagatttg
     4441 aattgatgcc gtctgaattt attttttcga cacagatatt aaaagagaaa ggactgtaca
     4501 aatggcaaaa aaaactacta aaactattca ttatttacgt gcgcagcaaa accatagctt
     4561 gttcgattta gaggtagcat taagaagggt tttgtcagct gctcctactg ttcaagatac
     4621 acaaattgaa caatacaatc agcttaccca aatcatgcat agaactttgg atcctaaaga
     4681 tgtaaaaggc aattcaattg gtggattact gatacacatt ggcagcggta caaaagatga
     4741 acatatccgc actatgagca atagacctgt acagcaagat gatcatggtg gaacacaagc
     4801 tcctccaagt ggatattcct ttttgcgtaa agaggctttt ttgtatattg ttggacacca
     4861 tgtaattttt tgcggacatg gttttttgtc agcatcaacg gttgcttctt atttaagttt
     4921 acttagcaat aaattgagag agaacaatcc ggatattgtt caatttaata ttgaattcaa
     4981 agcagtaggc aattgcgaca agttgtcatt gatacaacaa catggggtaa aaagtattct
     5041 tttagatgct tcggcatatc aattatccag aaacagactg tatcaagata gccgttcaac
     5101 cattgctaaa gcattaggga aagttggtag tgtatttaca agcgaattga gtgatgagga
     5161 attggaagca caatccgaaa ttcatatcaa tttagaagtc ttgctaaacg gtaattcgag
     5221 agccagtatt gaagcgcaat cgctgatgca ggagcaggca gaggaaatta ttgatgatga
     5281 aacggttaat caaggatttt ccattaccac gcaacaaggt gaagtgattc agccctctga
     5341 tgtaaaactg tctaaatctg ttagaatagg acgatacgat gaagccaact cgttactccc
     5401 tgactcggca tttacagcaa tcagtgaata tttcctagaa ctccaaagca gaaacttaac
     5461 tgaacaatga aaaaatatct gcccttacta cgttttttgt tgattgcttg tatatcagca
     5521 tttttagcat ggaaagggca accttttgtt catgggaacg agaaggccgt tgatttaatt
     5581 attaacgtat ttgcaatctt agccggtttt ttaattgcca ttatgacatt gtttagtgat
     5641 atgaggtttg atgaagatgc aaattggcga caaattcaaa ttcgtgaagg cgtacaagaa
     5701 caacggtata taaaacattc cttacttttt tacacatatc ttgccgtatt agtttgtgtt
     5761 tttattgtca tcttgttggc tcataaagaa gaatacaaaa atggaccagc cattttttgg
     5821 cttgaacgga gctatttatt tttagcctgt atttccattt tttattctgt attcttacct
     5881 gggaatttaa ttaaaagccg aaaagaagag tttaaaaaat taatggaaaa gaagaaaccc
     5941 aaaatctaga acgagtttta acccccttta aaatcccatt cagacgacct tttctaaaat
     6001 ccctgtattg atttttaatt caatacaggg atttttccat gtcagacaag ttcaaccaat
     6061 tcatcaaccg cgtcctctct cacgagggtg gttacgccaa ccatcccaaa gaccccggcg
     6121 gcgaaaccaa ttggggcatc actaagcgca ccgcacaggc aaacggctac aacggctcca
     6181 tgcgtgccat gacgcgtgaa caggcaatca gcatttaccg taaagcgttt tgggagcgtt
     6241 accgcgccga ccaaatgccc gaagcggtcg cttttcaatt ttttgatgcc tgcgtcaacc
     6301 acggttacgg caatgccgcc cgtatgctcc aacgcgccgc aggcgtgccg gacgatggaa
     6361 tcatcggcga aatcagcctc aaagccatca attcccttcc cgaaaacgac cttttattgc
     6421 ggttcaacgc cgagcgtctg gtcttttata ccaagctggg tacgttcacc tctttcggca
     6481 agggctgggt acgccgtgtg gcgcaaaacc tgattcacgc cgccgcagac aatgccgatt
     6541 gaggagcaaa ccatgtcaaa aaagtccatt ctcgccctga tggccgcagc catgcagccc
     6601 gatttcagcc acagcgacct aggcattcgc tacgccatgc cgactcaggg atgttggacg
     6661 caagcccacc gcaagagcgg ggtagccgcc gcgaaacgcg cagccaaaaa aaagcgtcac
     6721 aaataaccgc ctttttccga tggctgggcg gcttggtctc taatccggcc acagggaaaa
     6781 tcagccatac caaactttgg gcaaacgtcg ccgcagccgc catgacttgg aagttcgtgc
     6841 aggcggcgga cgcgcccgaa tggctttggt gggcatacgg cgcgatggtc ggcgggtatg
     6901 cattaatcaa acgcggcatc gccgccgtac cgcagttggc ggaagtcaaa aaatccgcaa
     6961 atcaggaagg ggggcggcaa tgattgaatt tgtccgagcc aaaaaacggc tgctttgggc
     7021 atttgtgctt ttgcttgtgt ggacgtgcgg ttaccgatac gccgccgaca aggccgaagc
     7081 ggaacaaacc gccctgattg ccacctatcg gcattcttct atggttgcgg cggaacaata
     7141 tgccttgcag cttaaaaaag cgcaggacga aaggcagcgg tggtacgact tttcccaaaa
     7201 acaaggaaga aagcccgtga aaaaacagta tccgccgcaa acgaaaaaag ccggctatct
     7261 gaaaaccaag gaagaactgc ttgcggaatt ggcttgcctt acagcggaaa tggctgccct
     7321 aaaaaagccc gatgccttaa tccatgggaa agaagtgcgg cagaaagaac gcaactcgtc
     7381 gcagggttaa ggcaatgcca tccgttgaac tgctgttgga gattgtcgga ctgccacgcg
     7441 gcaccttcta ttaccaattg gccgtccaat cggcagaaga caaatatgcc gatttgaaac
     7501 ggcatatcca tgatatttat cgacgacata agggaagata cggctaccgg aggattgcgg
     7561 cagccatccg tcacgcagga acaccggtca atcacaagaa agtcagccgt ctgatggcga
     7621 agacggggct gaaggcagtg atacggcggc gcaaataccg ctcgttcaaa ggagaagtcg
     7681 gcaaaattgc gccgaatatc ctgcgacgct gtttccatgc agaaaagccg aatgagaaat
     7741 gggtaacgga cgttaccgag ttcaatgtag gcggagaaaa gatatacctt tctccgatta
     7801 tggatttgtt taacggggaa atcgtcagtt accgtattca aatccgcccg actttcgatt
     7861 tggccggcga gatactgaaa ggtgcgccgg agaaaccggg atcgtctgaa aagccgatac
     7921 tgcattcgga tcaaggttgg caatatcaga tgttttttta tagtggatta aatttaaatc
     7981 aggacaaggc gatgaagccg cagacagtac aaatagtacg gcaaggcgag gcaacgccgt
     8041 actggtttaa atttaatcca ctatacaaca acgatagaat caagttgaaa ttaaaagggc
     8101 tgagccttgt tcagtacaga attcagtccc tgaaagccgc ttgattaaac tgtccgactt
     8161 tttggggtca gttcggcttc ggcatttttt tatccgtttg ggggtaactt gtttggaaag
     8221 ctgcaagctt ataaataaag gattacattt aagttttggg taaccttttt aaaaaaatgc
     8281 gtgatgactt ttgcattttt aaggcgtttt ttggggtaat tcgtgaaaag ttaccccaaa
     8341 agttacccca taaatggcga aaactcaagc atacgccagc atcctgcaac acaaaaaagc
     8401 cttgaaactg ttgaagttca aggctttttt gtgttgcagg atgctgctga aaatagggta
     8461 tggtggaggc ggggggaatc gaacccccgt ccgaaagtcc tctacaaagc gttctacata
     8521 cttagttgtg tctatttgaa aatcttattt ccatcatgcc gaccaacagg ccttttggaa
     8581 accagttacc ttaagtctta tttcctgcca agtaacccgg taggaaacca gtcaatgtaa
     8641 gatgacgttg cggtggcttt cgccacacag cccattgacc gactgctgca acggctagcc
     8701 ttaagcggct aaagcgtaag tttcgtcgtt tgcgactatt tgaattcagt gttttacggg
     8761 aatctgagac cccggtatgc ccgcatctgc ttcgcaaccc tcgtcgaaac caaggtcgcc
     8821 cccagaaatg gtttgcaaat tatacggata ttgtgcggtg ctgccaagtc tgtcggagaa
     8881 atttgtcagt cttgctgcct taatttgcgt ttgagcagga tgcggacgca gccgtcgttg
     8941 ccttcccggg gttcggcgta ggcgagtacg tcggggtgtt gcatcagcca gtttcgggtc
     9001 atatttttca gaacgggttt gtagcctttg gaacctaatc cgctgccgtg gatgatttcg
     9061 ccgcatacgc cgcgtttttg ggtgaatgcg atgaattcgt tgaggacttt ttgggcttct
     9121 tcctgtgtgt agccgtgcag gtcgacatcg gtaacgacgg gatagtatcc gtttttcagg
     9181 cgttggatgt cgttttttcc ctgtccgttt ttgctgaagc tggcgggcgg gtcgttgtat
     9241 gtgctgccga tgtagaagta gttttcttcg tcggcgcggt tgtctttggg acggactttg
     9301 atgggggttt tgtcgggcgg cgcataatat tgctgccggt tttttaatgg ggagacttgt
     9361 ccgactgctt gtgaaaaatc gaaatcctgt tcttgttttt gcttgttttt ttcggctgcc
     9421 tgtttttctg ccgcttcttt ttgggcttgt ttgcccagtt gtttgaggat gttttggaag
     9481 tcggtattca tattttttcc tgttatttgt ccgatggctg tttcgggcgg ggttttaatt
     9541 tgccggaatg tttaccaatc gggggaggat gattttgttg cctgcgtatg ttttttgaaa
     9601 gtgtgattgt atatcaaaaa gaaatgcggc aaccgtcggc agtgttgatt gccggaaatg
     9661 cggaccggtc gaaccgatat gcccgaacgc ctgataaagt tttaaaaacc tgccttgcga
     9721 agcaggctga cgtgttttgc caatcttgaa ttgccggaaa cgcgaaacac ggaaatctga
     9781 tgttttataa atgttccgat acgaactgca aaatattggt tttgtttctg acaggcaaaa
     9841 gcactgttta tttggctgtc aaaagggatg gttaaggaaa gttatgcgcc cctttgatga
     9901 agcgcgcccc agataaggat ggttgcgccg acggcttcag acggcatttt ggcggcggtg
     9961 ttgggttttg tatccggttt gccgttgtgt cttgtgatga tgattttggg cgcggttttt
    10021 ctgttttgat gtgtggaatg ccgtctgaaa ggcggttcag acggcatagc ggtcattttt
    10081 gtgcggtcag gcggtcgaat atgccgccgt cggcgaagta ggttttcatg atgttgtccc
    10141 atccgccgaa tttttcttcg ggagagaatg tgtctaagtc tgggaagtcg gctttgtgtc
    10201 ttgccaatac ttcggggttg cgggggcgca ggtagagtga ggcggcgagt tcttgcgccg
    10261 gttcgctcca aaggtattcg agataggcgc gggcggtttt ttgcgtgcct tttttcgcga
    10321 cgatgctgtt gacgacggcg acggggcttt cggcggaaat ggtgtagctc ggatagacga
    10381 tttcaaactg tccttgggtc agttttttgc tgacgtagtt ggcttcgttt tcaaaagtaa
    10441 tgagtacgtc gccgatgttg cgttgtgtga aggtggtggt ggcggcgcgt ccgccgtttt
    10501 caaaaacggg ggtgtttttg aggatggatg cgacgagttt ttgggcttcc tgttcgttgc
    10561 cgttggtggc tttcagaccg taaccgtatg cgccgaggaa ggcgtagcgt ccgttgcccg
    10621 aggttttggg attggcgatg acgatgttaa cgccgtcttt ggcaaggtcg ttccaatcgc
    10681 ggatctgttt ggggttgttt tttcggacaa ggaaaaccat agtgctggtg tagggcgcgg
    10741 cgtggtcggg gagggcttgt tgccagcctt tttctaccag tccttttttt tcgagcaggt
    10801 cgatgtcgga ggattggttc atggttacga catcggcttg aaggccgttg gctacggata
    10861 atgcctgttt gctggagctg ccgtgggact gttggatgct gacggatgtg ccggggtgtt
    10921 cggattggta tgttttgata aataaggggt tgtattcttt gtaaaaatcc cgtgccacat
    10981 cgtatgaggc gttgagcagg gtaatgtttt ttccgtcgga ttcggtattg gccggggcat
    11041 tttgtccgga cggatggttt gaatcggctg cggggctgca ggcggtgagc agggctgcgg
    11101 tatagagtgc cggtgcgtag gttttcatat gcttgtcctg tcggttggta gatggggcaa
    11161 ctttatacgg ctgtctgcgc ttgtggaaat aatgtttgat ttgaagatta tcagttttgg
    11221 ttataaggac ggatcagagg tgtttccgca tcagttcgca tttgattttg atgctggggt
    11281 caagctgcaa tactgccgaa ccgagcgatt cgtagcggtt gagaaggtaa aacgggacgg
    11341 agttgagcga tgcgtagagt ttcagaaagc tcaaaccgga tttgtgggcg atggtttccg
    11401 cctgatgaag cagggcagtg cccagtccga ggttgtggaa cagggggtgg acgtaaagcg
    11461 catcgagttg tgcttcttgg cagtcgattt ggaaaaatcc ctgtatgttg cctttgtatt
    11521 cggcaaccca aagtgctttg tcgggatctg aaatggtcgg caggtagctt tctgtgttta
    11581 acaagccttc ccatactttt agggcgtgtt cgttgtagct gaggatgcag gtgtattgga
    11641 cggagtgcag gtggactttg aagatgtctt tgcagtcttg cacggtggcg gggcgtaaca
    11701 gtgtcagcag gttcatggca gtatgtcggc ggcttcagac ggcatctgtg ccgttggtcg
    11761 gattataggg actgatgcag tttttttgct tcttgaaatg cggtgtccga atcggtggtt
    11821 aaaacggtaa agtgtcccat tttccgccct ttgtgcgcgg tttttttacc gtaaaggtgc
    11881 aggtgcgcgt ccggccggct ttgcagggga aaccaatccg gttcgccgcc gtcttcctgc
    11941 caaacgtcgc ccaaaatatt cgccatacag catgaagaaa gcaacttggt atcggcaggc
    12001 ggcaggttgc acataatgcg tacctgttgc cggaactggt ctgccgcgca ggcatctatc
    12061 gtatggtggc cggagttgtg cggacgcggc gcgatttcgt tgacgaccaa ttcatgtgtg
    12121 tcaccgacaa caaacatttc taccgccaat acgccgacat aatccaattc gtccgccaaa
    12181 cgctgcgcca tttgtcgcgc ctgttgctga atgtcggcac tcagtcgggc tgggacgatg
    12241 gagtaggcga ggataccgtt ttcgtgaatg ttttcggcag gatcgaaagt ttgcacgttg
    12301 tcattgttca gacggcatac gataacggaa atttcgccgc gcaagtccac cattttttcc
    12361 aaaacacaat ccacgccgcg gtgttcggca aacgcggctt tgagttcatc caccgttttg
    12421 acgcggattt ggcctttgcc gtcatagccc aatgtagcgg ttttcaggat gccgggcaga
    12481 aattgtatgc tttcttcagt gatgtcttcg gctttgcaaa ttgcttgata cggcgcggtt
    12541 tgcaggcctg ctttgcgtat ccatgacttt tcctgaatgc ggttttgcgc gatggcaacg
    12601 cagtcgccgc tgggggaaac attggtatgt ttggcgagaa aacgcatcgc atcggcattg
    12661 acgttttcga actcggtcgt aacagccgca cattttgcca attcttccaa agcggtttgg
    12721 ttgtcaaacg gcgcacacaa atggcggtcg gcaaattccg ctgccggcgc gtccggatcg
    12781 gggtcgagaa cggtgacttt gtagcccatg gttttggcag caacagtaaa cattctgcct
    12841 aattgtccgc cgccaagaat gccgagcatg gcgggcggag aaagagatat gtttttcatg
    12901 ctgactcttc aaattgtaca agttgatagc tataactaat tcttgacgga tgtcttgtat
    12961 cgctggaatt accagtttca gaaatacaga atactttttc cataaatttt tctgctttta
    13021 gaaattccag tattctgttt ttttcatcct tataagcact gcggtctgta ccccatgcaa
    13081 gaataatcat atcagcatct tccaaacatc ctttaaattt ggaaaaatcg gtttgggtgt
    13141 ttgccctaat tcctgtttgc tgtgtagagt aactggaaaa aatatttaac attttgaagt
    13201 tggtaaaacc gtacatatcc aagaaacgtg caagttgggt aagggttttg tcgcttcttt
    13261 catcatttgc tttacttgga ttaattccta tagcaacagc tgagaaattt ttaggatttt
    13321 ctgtgttgcc gctccatcta accgttagga tttctcgatt ttttttcatt atctgtatag
    13381 agaccgtctt tggtagtcgg tctgagtgtt tggcgaagct cataaagttt ttcataagtc
    13441 atttatccaa cccttcctgc accatctgcg cggcgcgtat aacggctcgg gctttgtttt
    13501 gtgtttcctg ccattcggag gccggatcgg agtcggcaac cacgcccgcg ccgctttgga
    13561 cgtatagcgt gttgtttttt actacggcgg tgcggatggc gattgccaaa tccatgtcgt
    13621 tgttgaaacc ccatacgccg acggcaccgc cgtagatgcc gcgtttgctc ggttcgactt
    13681 cttcgatgat ttccatggcg cggactttgg gtgcgccgga gagtgtgccg gcagggaagg
    13741 tagcggcgag gatgtccatg ttggtcatgc cgtctttcag acggccttcg acgttggaaa
    13801 cgatgtgcat tacatgggag tatttttcaa tcaccatttt gtcggtaact ttgacttcgc
    13861 cggttttact gatgcggccg acgtcgttgc gtcctaaatc gatgagcatg acgtgttcgg
    13921 cgatttcttt ggcatcgctt aacaaatctt gttcgttggc aaggtcttcg gcgggggttt
    13981 tgccgcgcag gcgcgtgccg gcgatggggc ggacgatgac atcgtcgcgt tcgcggcgga
    14041 cgaggatttc gggcgaggag ccgacgatgt ggaaatcgcc gaaatcgtag taaaagagat
    14101 aaggcgaagg gttgagcgta cgcagggcgc ggtagagggc gagcgggctg tcggtgaatt
    14161 ccatgctcat gcgctggctg gggacaacct gcatgcagtc gcctgcgaag atgtagtctt
    14221 tgattttgtt aacgcaggct ttgaacggct cttcgccgaa ttcgctgacg gcttcggtgt
    14281 gtttgctgcc gagcgagagc gggatggcgc agctttggcg caactgggtg cggatgtctt
    14341 cgaggcgttc gcgggcgcgt tcgtagccgt cgggctgcga cggatcggcg taaacgacga
    14401 gatggatttt gccgctcaaa ttgtcgatca ccgccaattc ttgcgacagc atcagcaaga
    14461 tgtcgggcgt gccgagcggg tcggctttgg tggtgttttt caggcggtgg gcgaagtgtt
    14521 cgaaattgta gatggtttcg taaccgaagt agccgaccag tccgccggta aagcgcggca
    14581 ggcttgggat ttcgggtgtt ttgaagcggt tgtggaaggc ttcgataaag ggcagggggt
    14641 tgccgtcgtg ttgctcgaca atttcgccgt tttgataaac atcgacgtgt ttgccgctgg
    14701 ctttgagata gtggctgcaa ggcaggccga taaaagaata gcggccgaaa cgttcgccac
    14761 cgacaacgga ttcgagcagg taggtatagg ggcggttggc gagtttgaga tagagggaaa
    14821 gcggcgtatc caaatcggca aggagttctt gcacgagcgg gatgcggttg tagccttggg
    14881 cggcttgggc ttggtattct tgtttgctga tcatttctgc tttcccaaag ggcggtttcg
    14941 gacggcgcgg caacgggcgc gagtatagca ttttatcgga attgttgaca gtctgaccgg
    15001 agatgccgtc tgaaaaggac gggcttacgg ctttgttttg cgctgccggt attgtttcca
    15061 tttaaacaga taacctgcgg ttacgggaat cagggctaag atggttttga acgtccatga
    15121 tgcataccaa ggtaaagaac cgggtgcgac cgattgattc agatacggcc accaacaggc
    15181 agtcaggcag ccgagtagca gcggccagat atgccggctg aggttttttt gccaaaggag
    15241 gaatgatgcg gcagaccaaa gcagggtaag ggcagtgatt tttaacacgg tataagcatc
    15301 cgctccaaac agggcggcga gaaaatacgt accggcaatc cagaggacgg caagtatcag
    15361 gacaatgatt tcttcaggtc gtttgaacat ttttttcttc ctgtttgatt tcagacggca
    15421 ttgccgttct gtttggtttc cagcagctcc cagcgttcca gcttttccaa aagcagcatt
    15481 tcgatttctt cggcgcggct ttgcagtgcg ccggcttttt cgtaatcttt gaagatttcg
    15541 ggatcggaaa gctgcgcgtt gatttctgcc tgttcggctt ccaaggcggc gatttcgtcg
    15601 ggcagggcgt cgagttcgcg ctgttctttg taggacagtt tgaccgtgcg gttggctttg
    15661 ggtttttctt tcaccggttc ggcatcggct gttttgggtg cggattccgt ctgaatcttc
    15721 gcttcgcgtg attttgcgtc gatgtagtcc tgatagccgc cgatatattc ttttaacctt
    15781 ccatttcctt caaaaataat gctttgggta atcacgttat cgaggaacat acggtcgtgt
    15841 gagacaagga ataccgtgcc ttgataatcg cgcagcaaat cttcaagcag ctcttgggta
    15901 tcgatatcca agtcgttggt cggttcgtcc aaaatcaaaa tattagcagg acgggtaaag
    15961 agttttgcca gcaaaaggcg gttgcgttcg ccgccagaga gtgaagaaac aggactttgc
    16021 gcgcgggcag gggggaacag gaaatcttct aaatagctca tcacatgctt tttcttaccg
    16081 ccgacttcaa cgtaatcatt gccctgtccg agcgtgtaaa acacggtttc gttttcattc
    16141 aacgcgctgc ggaactggtc gaaataggcg acttcctgct tgctgccgat acggattctg
    16201 ccgtaggtcg gctgcaattc gcccaaaatc agcttgagga aggtggtttt gccgataccg
    16261 tttgggccga ttaagccgat tttgtcgcca cgctgcaaga tggcggagaa tttgtccata
    16321 atgactttgc cgccataggc aaacgaagcg tgttccaatt cggcgatgat tttgccgctt
    16381 ttctcaccgc tatcgagctt aaagttgacc tgtccctgca cgttgcggcg ttctgcacgt
    16441 tggcggcgca gctcttccaa acggcgcacg cgtccttcgt tacgggtacg tcgcgcttcg
    16501 atgcctttgc gtatccacgc ttcttcctga gcatgaaatt tgtcaaacaa gcggttatgt
    16561 tccgcctcga ctgccaactc ttgcgctttt ttctcactgt atttagagaa cgagccggga
    16621 taggaacgta gaatgccgcg gtcaagttcg acaatccgcg tagcgatatt atccaaaaaa
    16681 cggcggtcgt gggtaatcac gaccaagctg ccttcaaacg ccttgagcag gttttccaac
    16741 cagataatcg cgtcaatatc caaatggttg gtcggttcgt ccagcagcaa tacgtcgggc
    16801 ttctgcaccc aagcctgcgc caaggcgaca cgctttttct gaccgccgga aaggttgccg
    16861 attttttcgt tttccggcaa accgagttcg cccaaagtct gcttgactgc cgcatccagc
    16921 ttccagccgt ccttcgcttc gatttcaagt tgtaattcgt tgagttcttt caacaaagcc
    16981 tcacccgaac cgttttccaa ctcatgaccg acgcggtggt aacggcgcaa taaatcgcga
    17041 attttaccca aaccttcggc aacggtatca aatacggttg cgtccttatc aaaaaaggat
    17101 tcctgcggta cataaacgat tttgaggttg ttttgaacaa taatctgccc gtcgtcgagc
    17161 ttttgcacgc cggcgaggat ttttaaaaac gaagacttgc ctgcgccgtt gcgtccgatc
    17221 aagccgactt tttcgccgct gtcgagttga aaagaagttt tgtcgagcaa ggcaacgtgg
    17281 ccgatggcaa aagaagcgtt ttctacagat aatatattca tgatacaaat tctcaacagt
    17341 taccgtttgg attttaccgc aagtttggcg cgggcaattt caaccgcacc cggcaggacg
    17401 gaaacaataa tgatgccgcc catcaccaag cccagattgt tttttacgac ggggaagttg
    17461 gcaaagaaat agcccgcgta agaaaacagg ataacccaca acaagccacc gatgatgttg
    17521 tagcggataa atttggcata gtgcattttc cccataccgg cgacaaaggg ggcgaaggtg
    17581 cggacgatgg gcacgaagcg cgcgatgata atcgttttgc cgccgtgttt ttcgtaaaaa
    17641 cggtgggttt tatcgagata ttcgcgtcgg aagattttag aatcgggatt ggcgaacagc
    17701 ctgccgccga aatatttgcc gacggtaaaa ttgagcgcgt cgccgagtat ggcggcaagg
    17761 cttaataatg caaccatcaa atgaatatcc ataccgccca gcgcggcaat accgccggcc
    17821 gcaaacagca gcgaatcgcc gggcagtaag ggcgtaacaa tcaggccggt ttcgcaaaaa
    17881 acaatcaaaa acagaatcgc ataaatccac acaccgtatt gcgccgacag cgcgagcagg
    17941 tgttggtcga tatggaggat gaagtcgatg gcggaggcaa gcacggcgcg ttcctaaaaa
    18001 aacaaaccgc gtattttaac cgattggaaa aatgccgtct gaaattttca gacggcatcg
    18061 gctattcaaa ttcatttcac gtaaaaaccg caaaccaaaa tagtttgcgg tttggcattt
    18121 aaagcgacaa tgatgatttc aaatcatcag aattttatgc cgacgcgcaa gccgtattca
    18181 cgaatactgg ttttcgggat ggtgagcgat acgtcgccac tcttggttgg tacactaaac
    18241 tcgccggatt ctttgtaagt acgttgtttg tagaacggcc ccgcctcgat gctggcggat
    18301 tcgcccagtt ttttaccaat atttgcaccc aatccaaagc cccagccgtt ggttttttga
    18361 ttgatgtctt ttttgagact ggtaacgccg gtgtttaatt tatagcggga cttgaggtca
    18421 aatttcactt cagaccaagg gttgatatac cagccgttac ccagttggga aagcaaatcc
    18481 gcgtgaactt tggctgacca cgactgacgg ctgctgtgaa gcgtatgctt ggtggtttta
    18541 atgctgtctt ttgaagattc aaaacccaag ccggcaccca cacggaaatt taaagaatca
    18601 cttaacgttt gggtgtaggt gtagcctgtg taaagatcga tacggttttc aggaacgccg
    18661 gtgggcagtt ttacattttt agtcttaccc agcttgttct catctgtttc caaattaata
    18721 atattttttt gctgcgcccg aaaccggctt ccaagcggat gccttggttg gcatcaaaag
    18781 gaatatcagc acgtacgccg atgtgtttgg cagctttgtg tttttctttc aggaaagcac
    18841 gagttgaaga aatggaagag aggtcggtgt ggacggtaaa ctcattagcg gtttgaagct
    18901 cttgtgcagc ggcggcagta ccggtcaggg caatcatggc acatgtaaaa actgtttttt
    18961 tcatagttaa aatctccaaa atttggattg tagtcggata tggtaacata acgtaaataa
    19021 tcgttacgct tacaattata ttcttaagct ttcggggggg ggattttaca tatattaata
    19081 aaaattaaca aatagttatt tgtttacaac gaattgttat tctcacttgg ttttctgttt
    19141 tttatgggaa tgacgaaatt ttaggtttct gatttcggtt ttctgtttta agggaatgac
    19201 gagacttgag atggcggcat ttatcgggag caactgaaac cactctgccg tcattcccgc
    19261 gaaagcggga atctaggttc gtccggtttc ggttatttcc gatagattcc tgccgcgttg
    19321 ggggtctgga ttcccgcctg cgcgggaatg acgaatttca ggttgctgtt tttggttttc
    19381 tgtttttgtg aaaataacag gatgagatct ttgcaaaatt cctttccctc ccgacagccg
    19441 aaacccaaac acaggttttc gtctattttc gccccaaata cctcctaatt ttacccaaat
    19501 acccccttaa ccctccccgg atacccgata atcaggcatc cggtctcctt ttaggcggca
    19561 gcgggcgcac ttagcttgtt ggcggctttc aacaggttca aacacatcgc cttcagatgg
    19621 ctttgcgcac tcactttgag cagaccaaaa taggctgccc g
//
LOCUS       DBBZYD010000032        19381 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.032, whole genome shotgun sequence.
ACCESSION   DBBZYD010000032 DBBZYD010000000
VERSION     DBBZYD010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19381
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.032"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..124)
                     /locus_tag="ACJJDL_000936"
     CDS             complement(<1..124)
                     /locus_tag="ACJJDL_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7573672.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQ"
     gene            complement(187..1005)
                     /gene="hslO"
                     /locus_tag="ACJJDL_000937"
                     /pseudo
     CDS             complement(187..1005)
                     /gene="hslO"
                     /locus_tag="ACJJDL_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
     gene            1250..2005
                     /locus_tag="ACJJDL_000938"
     CDS             1250..2005
                     /locus_tag="ACJJDL_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HGG7573673.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPAQRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            2024..2242
                     /locus_tag="ACJJDL_000939"
     CDS             2024..2242
                     /locus_tag="ACJJDL_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573674.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            2387..2731
                     /locus_tag="ACJJDL_000940"
     CDS             2387..2731
                     /locus_tag="ACJJDL_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HGG7573675.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            2731..3423
                     /locus_tag="ACJJDL_000941"
     CDS             2731..3423
                     /locus_tag="ACJJDL_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HGG7573676.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            3490..4710
                     /gene="argJ"
                     /locus_tag="ACJJDL_000942"
     CDS             3490..4710
                     /gene="argJ"
                     /locus_tag="ACJJDL_000942"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HGG7573677.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLSFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            4770..6172
                     /locus_tag="ACJJDL_000943"
                     /pseudo
     CDS             4770..6172
                     /locus_tag="ACJJDL_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            6361..7752
                     /gene="hrpA"
                     /locus_tag="ACJJDL_000944"
     CDS             6361..7752
                     /gene="hrpA"
                     /locus_tag="ACJJDL_000944"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HGG7573678.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     RRLAALPKPEFDNTLPVHEKLEEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARHGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            7853..8980
                     /locus_tag="ACJJDL_000945"
     CDS             7853..8980
                     /locus_tag="ACJJDL_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HGG7573679.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            9158..10734
                     /gene="lpt3"
                     /locus_tag="ACJJDL_000946"
                     /pseudo
     CDS             9158..10734
                     /gene="lpt3"
                     /locus_tag="ACJJDL_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
     gene            10836..13916
                     /locus_tag="ACJJDL_000947"
     CDS             10836..13916
                     /locus_tag="ACJJDL_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HGG7573680.1"
                     /translation="MDARSNPVNVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRPPEIRQLTSSESQGDQDLAAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAR
                     EIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYHERLP
                     NFYTADAVSDDLHPTNPQQTAPSPVGEGWGEGKTVAAQTNFSATAANPLPNPLPQERE
                     QSAAASAVSNDLHPANPQQTAPSPVGEGWGEGKTVAAQTNFSATAANPLPQEGEQSAA
                     ASALSDDPQPQKQPASQKGRLKPLPLADIRTFQAWLKTAERENPRLLFLSRDDLMQHA
                     AAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPG
                     MLREKIQLLIKALPKQIRRICVPVPDFITKFLESNPDRQAAIIPQLAHFIAKSAGDMR
                     IFEQIDQDAWAVQELPEHCYLNLRIIDDGGQELAGGRKLHELQQQLGQAAATTFRDNT
                     QEFERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRLCDTIEAAEQAH
                     RQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGED
                     ELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRL
                     QTLLAPSFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEK
                     TDSLVKQGLPISDGLAGFKWMIEELRVSLFAQELKTPYPVSVKRLMKEWERLNK"
     gene            13975..15582
                     /locus_tag="ACJJDL_000948"
     CDS             13975..15582
                     /locus_tag="ACJJDL_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG7573681.1"
                     /translation="MKSENNYERIVQNSKKFQHSQKNEMQKRITDLLQQLTNGIHERD
                     QIMAVSLLGAIAGHNTFLFGPPGTAKSLISRRLACAFENPQYFEYLMNRFSTPEEVFG
                     PVSIKALKEDRYLRKIEGYLPTADFAFLDEIWKSSPAILNNLLTIINEHIFKNGDERF
                     NVPLKALIAASNEIPPENQGLEALYDRFIIRLLVPPIEQEENFNRLLDSKPSSDKPEI
                     SEDLRISYHELAKWREQLHKVRLSTDTLLIIKYIREELAAQFDKLGVYVSDRRWQRAA
                     VLLKASAFCNGRKETNHSDVILLKYCLWTTPENRESVEQIVMNAIKSCGFDTGIDLAE
                     LDREKESLDKEINKELYHSQDVYETVEMSGKKYFPVQAVFKNVHNSHANKELKIYVPY
                     SKFRSKEKFYPIDSTGNEIQEIECEFDGQGCCKLELKVRGGHWNEQYKPLKFKPNILF
                     HKGDKKSDVNERLIHSLTQSISDIRKQLIDTQKQVEKKYEKYQQYLQSPFVAQADIDV
                     AISGILDQIDKLNLRIKDCERLESLCR"
     gene            15573..17033
                     /locus_tag="ACJJDL_000949"
     CDS             15573..17033
                     /locus_tag="ACJJDL_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HGG7573682.1"
                     /translation="MSLNRKLSEQIRWIKASLQIDYADLFKQHGSLNGQIQQRLSDWQ
                     YQAKLALLQKNPFILHEEKLKKHQQTEIFNQQSVDDYRYFCKLAGVPFEKEFWQQELT
                     QSKNSKPNKQNLPLKLLTGKWQQQLDYAKSQWYLKQLNQLRQEFIDKLKQELDTIRQL
                     AEQLEQFGFEAGLWFDNSIGNLSQQNIEEMKRWLNYLTQDKNAQQIAELLGKMRQIEQ
                     SEKIEQVKQTVYTKSPQIDVNSREEIIGLRLGKDLEYVLPSELALMADEETSTLFDLK
                     FLESKLMCFELQGMTYCDAPTEIIVEQKSQEDEKLGPMILCVDTSGSMVGLPENIAKA
                     MALFLGAKAKSENRSCFVINFSTGIETFELTSKTGISNLIAFLRQSFHGGTDAAPALR
                     HALKMMEQEIYQKADLLMISDFVMNSLPDDLLASIEIQRETGNQFNSLVIGDAFMSKR
                     LKTHFDREWIYNPNVQTIQELVQFKKDIFNKQVVNS"
     gene            complement(17387..17860)
                     /locus_tag="ACJJDL_000950"
                     /pseudo
     CDS             complement(17387..17860)
                     /locus_tag="ACJJDL_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            18092..18304
                     /locus_tag="ACJJDL_000951"
     CDS             18092..18304
                     /locus_tag="ACJJDL_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger domain-containing protein"
                     /protein_id="HGG7573683.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            18488..18756
                     /locus_tag="ACJJDL_000952"
                     /pseudo
     CDS             18488..18756
                     /locus_tag="ACJJDL_000952"
                     /inference="COORDINATES: protein motif:HMM:NF017953.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
     gene            complement(18846..19295)
                     /locus_tag="ACJJDL_000953"
     CDS             complement(18846..19295)
                     /locus_tag="ACJJDL_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HGG7573684.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT         5149 a         5356 c         4495 g         4381 t
ORIGIN      
        1 tttgacggtt caggtattgt tcgatcggct gccaatcaat cacctggtcc aacttcaata
       61 gcgggaaacg gtcgatgtgt ttggcaatca tggcttgggc ggtttgttga aagaaggtgc
      121 tcatgagaaa tcccctaaat gtcttggtgg gaatttaggg gattttgggg aattttgcaa
      181 aggtctcttg ctgtggcaga aatcgcaatc gacttcgatg ctgccttgtt ccaccaccac
      241 gccgccgact tcttccccgc ccagcatcag cagcatatcg ctgactttgc cgcgcgaaca
      301 ggtgcatgaa aattcaaacg tttccggctc gaacacgcgc ggcggcgttt cgtggaacag
      361 gcggtacaaa acatgttgcg catccaattc tgccagctcg tccgccgtca gtgtacgcgc
      421 cagcgtactg acgtgttccc atgcctcttc atccaacacc gcttcaggca gacgctgcac
      481 cagcagaccg cccgccgctt cgtcgcttgc agacaggacg atgtgcgtat cgatttgttc
      541 ggaacgcttc atatagttcg ccaacatttg cgcgataccg ccgccttcca aaggcactac
      601 gccctgccag ggttcgccgt ctttgggctg cagcgtcagc acgaatacgc cgccctcgcc
      661 caaaaggtcg ccgaggcttt cgtcatcggc tatttctgcg gtttcgtccc aacgcgcggt
      721 tgcacggacg gtacggtcgg aagccgcttc cgcaaccagc attttcagcc gcccccgccc
      781 ctgaacctgc acaatcagcg tgccttcgtt tttgaggttg cccgacagca acacacccgc
      841 cgccaacaac tcacccaaag cgcggcggat ggcggcggga tagtttttct gttttacaat
      901 gtgctgccac acgttttcca gacggacgtg cagcccgcgc acgggcatat cgtcgaagat
      961 aaagcgggta cgcacatcgg cgcggttgat ggcggtttga ttcatgattt tctctgactg
     1021 attgttcgga tggcggctat atggttgcgg tcggcgcgaa aacaagacgg acggcggatg
     1081 cgcttcccaa attatcaata aattatataa aaatcaacat attaactcaa tctaacaagc
     1141 cgttttttgc caaacagccg tttttttata tacaatcaac aagatatttt cgactgatac
     1201 agcataacat cgcacggcgg cacgatgcct cctgcgcgga aacaccgata tggattcttt
     1261 tttcaaaccg gcagtttggg cggttttgtg gctgatgttt gccgtccgcc ccgcccttgc
     1321 cgacgagttg accaacctgc tcagcagccg cgagcagatt ctcagacagt ttgccgaaga
     1381 cgaacagccc gttttaccca tcaaccgagc ccccgcccgg cgggcgggca atgccgacga
     1441 actcatcggc agcgcgatgg ggcttaacga acagcccgtt ttacccgtca accgagtccc
     1501 cgcccagcgg gcgggcaatg ccgacgaact catcggcaac gcgatggggc ttaacgaaca
     1561 gcccgtttta cccgtcaacc gagcccccgc ccggcgggcg ggcaatgccg acgaactcat
     1621 cggcaacgcg atgggacttt tgggtattgc ctaccgctac ggcggcacat cggtttctac
     1681 cggttttgac tgcagcggct tcatgcagca catcttcaaa cgcgccatgg gcatcaacct
     1741 gccgcgcacg tcggcagaac aggcacggat gggtacgccg gttgcccgaa gcgaattgca
     1801 gcccggagat atggtgtttt tccgcacgct cggcggcagc cgcatttccc atgtcggact
     1861 ttatatcggc aacaaccgct tcatccacgc gccgcgcacg gggaaaaata tcgaaatcac
     1921 cagcctgagc cacaaatatt ggagcggcaa atacgcgttc gcccgccggg tcaagaaaaa
     1981 cgacccgtcc cgctttctga actgatttcc caaggaatac gcaatgagta tgcccgaaat
     2041 gcccaaatgg tacgacgatg acggacagat cgtgtcctgt accgaaaagg tcaaagtgat
     2101 gtccgaaaat atggccgagc tgtatcagac ggcacaagac gcgtttgaag acgcgctgct
     2161 gatgggttgc ggcgaacgtc aattgcgcga ttacctgctc gcgctgattg aaggtttgga
     2221 aaatccctac cgcaaagtct gaacacgccc cggttgctgc ggcacggttt atccgtgccg
     2281 tttttgcgtt tgtgcgcggc ttcggctttt cagacggcat atttgacgtt atgattaaac
     2341 agttaacaag atttatcaca acgccgtcaa aagacagaca cacaacatga acatcatccg
     2401 cgcgctcctc atcatcctcg gctgcctcgc cgccggcgaa accgccgttt tcctagcagg
     2461 catcaaactg cccggcagca tcgtcggcat gggcgtgctg tttgcgcttt tgcaggcggg
     2521 ttgggtcaaa acgtcttggc tacaacagct taccgacgcg ctgatggcga atctgacgct
     2581 gtttctcgtg ccgccctgcg tggcggtcat cagctatttg gatttgattg ccgacgattg
     2641 gttttcgata ctggtttccg cctccgccag cactttgtgc gtactgctgg ttacaggcaa
     2701 ggttcaccgc tggatacgga gcattatctg atgaacgaaa tcctcaggca gcccagcgtt
     2761 ctgcttttcc tcacgcttgc cgtgtacgcg cttgcgatta tcgtgcgcac gcgcacgggc
     2821 aatatcttct gcaaccccgt actcgtcagc actatcgtgc tgattgccta cctgaaaatc
     2881 ctcgacatcg attatgcggt gtaccacaac gccgcgcaat tcattgattt ttggctgaaa
     2941 cccgccgtcg tcgtgcttgc cgtgccgctc taccaaaacc gccgtaaaat cttcaaccag
     3001 tggctgcccg tcatcgtttc acagcttgcg ggcagcgtta cgggcattgt tacggggatg
     3061 tattttgcca aatggctggg cgcggaacgc gaagtcgtcc tctcgctcgc gtccaaatct
     3121 gttaccaacc ccatcgccat tgaaatcacc cgctccatcg gcggcattcc cgccattacc
     3181 gccgccaccg tcatcattgc cggtctggtc ggacagattg ccggttacaa aatgctgaag
     3241 aacacagtcg tcatgccctc gtccgtgggt atgtcgctcg gcacggcttc gcacgcgatg
     3301 gggattgccg cctcgctcga acgcagccgc cgtatggcgg catacgcggg actggggctg
     3361 acgttcaacg gcgtactgac cgcgctgatt gcgccgctgc tcatccccgt tttgggattt
     3421 tgaacccgtt tcagacggca tttcagccca tgctgtctga acgccgacac actcgcaagg
     3481 agaaccgtta tggctgtcaa cctgaccgaa aaaaccgccg aacaactgcc cgacatcgac
     3541 ggcattgccc tctacaccgc ccaagcaggc gtgaagaagc ccgggcatac cgacctgaca
     3601 ctgattgccg tagccgccgg cagcaccgtc ggtgcagtct tcacgaccaa ccgtttctgt
     3661 gccgcgcccg tccacatcgc caaatcgcac cttttcgacg aagacggcgt gcgcgccctc
     3721 atcatcaaca cgggcaacgc caacgcgggt acgggcgcac agggcagaat cgatgctttg
     3781 gcagtgtgtg ccgccgccgc ccggcaaatc ggctgcaaac cgaaccaggt gctgcccttc
     3841 tccaccggcg tgattctcga accgctgccc gcagacaaaa tcatcgccgc gctgcccaaa
     3901 atgcagcctg ccttctggaa cgaagcggca cgcgccatca tgaccaccga caccgtgccc
     3961 aaagccgcct cgcgcgaagg caaggtcggc gacaaacaca ccgtccgcgc cacgggcatc
     4021 gccaaaggct cgggcatgat tcatcccaat atggcgacca tgctcagttt catcgccacc
     4081 gatgccaaag tttcccaacc cgtcctccaa ctgatgacgc aggaaatcgc cgacgaaacc
     4141 ttcaacacca tcaccgttga cggcgacacc agcaccaacg acagcttcgt catcatcgcc
     4201 accggcaaaa acagccaaag cgaaatcgac aacatcgccg acccgcgtta cgcccaactc
     4261 aaagaattgt tgtgcagcct cgcgctcgaa ctcgcccaag ccatcgtccg cgacggcgaa
     4321 ggtgcgacca agttcatcac cgtccgcgtc gaaaacgcca aaacccgcga cgaagcccgc
     4381 caagccgcct acgccgtggc acgttcgccg ctggtcaaaa ccgccttttt cgcctccgac
     4441 cccaacctcg gcagactgct cgccgccatc ggttatgccg gcgttgccga cctcgatacc
     4501 gacctcgtgg aaatgtatct cgacgatatt ttggttgccg aacacggcgg acgcgccgca
     4561 agctacaccg aagcacaagg gcaggcggtg atgtcgaagg ccgaaatcac cgtccgcatc
     4621 aagctgcatc gcggacaagc cgccgccacc gtctatacct gcgacctgtc gcacggatac
     4681 gtttccatca acgccgacta ccgttcctga cccgacacgg cttcagacgg catacataaa
     4741 atgccgtctg aaccgccgga caacatacca tgacctccac attcccccgc cgcctcgccc
     4801 gcaaaatccg ccaaacccgc cgcctgtcgc gcaaaagcat cgcctttctg ttccttttgg
     4861 caggttcggc actcgtcgcc ctgaccgcgc tgttttttgc ccatcttgcc gattttgcgc
     4921 tggaactgaa cgccaaactg gttcaacaat acccgtggtt cgcgtgggtc gcgcttcctt
     4981 tgggtttacc gcttattgcg tggctcacac gcaaattcgc ccccttcacc gccggcagcg
     5041 gcatcccgca ggtcatcgcc tcactgtcgc tgccctacgg cgcacagaaa acgcggctga
     5101 tccgcctcgg gcagacactg ctgaagattc cgctgacctt tttgggtatg ctgttcggcg
     5161 cgtccatcgg acgcgaaggt ccgtccgtgc aggtcggcgc ggcagtgatg ggcgcgtggg
     5221 gcgcgtggtg caagaaacac ggcttggcat tcaaagggat gcaggaaaac gatttgatgg
     5281 cggcgggcgc ggcgggcggt ttggcagccg cgttcaacgc gccgctggcg ggcgtgattt
     5341 tcgccattga ggaactcggg cgcggcatca tgttgcgctg ggaacggcag attctgctcg
     5401 gcgtactcgc cgccggtttc atacaggtcg ccattcaggg caacaacccg tatttttccg
     5461 gcttcaacgg cggcgtattg gaacatatct ttctgtgggt cgcactgtcc ggcctggttt
     5521 gcggcgcggc gggcgggctg ttcggacgtt tgctctatcg cggtgcggcg gcgtttgcac
     5581 cgcgcaagat acgcggcttc atccgcaacc gtccgctgct gctggcggca ctgatggggc
     5641 tgctgctcgc cctgctcggc acgttctacc aaggcaaaac ctacggcacc ggctaccacg
     5701 aagccgccca agccctgcac ggcatctacg aagccccctt cggactcacc gccgccaaat
     5761 ggctcgccac cgtattcagc tattgggcag gcattccggg cggcattttc actccctcgc
     5821 tgaccatagg cgcggttttg ggcgagcata tcgccgccat cgccgacata tcgcagggtg
     5881 caaacatcat cgtcctcatc tgcatggcgg catttctggc gggcgcgaca caatccccga
     5941 ttacttccgc cgtcgtcgtc atggaaatga cgggcggaca aagcctgctg ttttggatgc
     6001 tgattgcctg cattttcgcc tcgcaggttt cgcgccagtt ttcgccgcgt ccgttctacc
     6061 acgcatcggg aatgcgcttc cgccagcgcg tgcttcaaga aaccgccgcc caaaccggca
     6121 atgcgcccgc aagaccgcaa acagcaaaac gggaatgccg tctgaaaatt aaaacgcccc
     6181 cgatcaaacg ccggcagccg ccttgattcg aataccgttc cgccgccgct tgaaatttca
     6241 gcaacaatgc cgtctgaacg acagaatgcg gttttcagac ggcatttccc catcccgata
     6301 ttgcctaaac aaaaccgaag cgtttgctat aattgcactt tttaccgcac acgcacgccc
     6361 atgtttcccg atttctccca aaccctctcc aaagaccgcc acttcctgca atccgccttc
     6421 aaaaatccca acaaatacgg cggtttgtcc aaagtcgaag aaaaataccg aaaatcgcac
     6481 gaaatctttt tgaggcgttt ggccgcattg cccaaacccg aattcgacaa caccctgccc
     6541 gttcacgaaa aactcgaaga aatcaaaaaa accgttgccg aacatcaggt aacgattatt
     6601 tgcggcgaaa ccggttcggg caagaccact cagttgccca agatttgttt ggaactcggg
     6661 cgtggggcgg cggggctgat cgggcatacc cagccgcgcc gtttggccgc gcgctccgtg
     6721 gcagagcgga ttgccgaaga gctgaaatcc gaaatcggca gcgcggtcgg ctataaagta
     6781 cgcttcaccg accacacctc gcgcgatgcc tgcgtcaagc tgatgaccga cggcatcctg
     6841 ctggcggaaa cgcagaccga ccgttatctc gccgcctacg acacgattat catcgacgaa
     6901 gcgcacgagc gcagcctgaa catcgacttc cttttgggct atttgaaaca actcctgccg
     6961 cgccgccccg atttgaaagt catcatcacc tcggcaacga tagacgcaga acgcttctcc
     7021 cgacacttca acggcgcgcc cgttttagaa gtgagcggac ggacgtatcc cgtcgaaatc
     7081 ctctaccgac cgctgaccgg caaagacgaa gacgacgcag aagtggagtt gaccgacgcg
     7141 attgtcgatg cggcggacga attagcgcga cacggcgaag gcgatatttt ggtattcctg
     7201 ccgggcgagc gcgaaatccg cgaagccgcc gaagccctgc gcaaatccac gctgcgccgc
     7261 aacgacgaaa tcctgcccct gttcgcacgc ctgtcgcacg ccgagcagca caaaatcttc
     7321 cacccctcag gcgcgaaacg ccgcatcgta ttggcaacca acgtcgccga aacctcgctt
     7381 accgtgccgg gcatcaaata cgtcatcgac accggcctcg cgcgtgttaa acgctattcc
     7441 gcacgggcga aagtggagca gcttcatatc gaaaaaatct cccaagccgc cgcccgccaa
     7501 cgatccggcc gctgcggacg cgtctccgca ggcgtgtgta tccgactgtt ttcagaagaa
     7561 gatttcaaca gtcgccccga atttaccgac cccgaaatcg tccgcagcaa cctcgccgcc
     7621 gtcatcctgc gcatggcatc gctgaaactc ggcgacgtag cggcattccc atttttagaa
     7681 atgcccgatt cgcggtatat taatgatggg tttcaggtgt tgctggaatt aggggcggtg
     7741 gaggccgcct gaaaacaagt aggatataca cttctacctg acaaagacca acaaacgata
     7801 aaactacggc acatctagat gcccaaccta caacattgca cacggtaaaa acatgaaaca
     7861 cttactcatc gattttgaaa acgtccagcc gcaaaactta gacaaattac taaccgaaaa
     7921 tacccatatt tggctattta taggtgtatt acacaaaatg ttacctatta gtctggtgca
     7981 atccctacta cgtttcggcg aacgtgtcca tcttgtccag ttacaaaaaa cagggaaaaa
     8041 cgcattggat ttttacctgt cctattacct cggacaaatt accgccacag accccaatgc
     8101 ccaaatcggc atactctcgc gtgatggagg atacgatgtt ctggtcgaac atattttgaa
     8161 aaaccaccag gcgaagggta tcgtgcgcct agccaatata gatgaagtac aacatcagaa
     8221 aattactacc gaaccgccgt cagcattgct ggaaaacact cctcagcctg aaaccaccct
     8281 caaaccacag caaccattaa cttcctattt ccaagcagcc ctaactgcac tgcgccgccc
     8341 cgacgctttc cgcccctgcc gcctgcataa cctgcgacaa aatctgcgta agcatatttt
     8401 gagtgatttg tttaaagaaa aaaccgatga agaatgcgaa ataaccactg ctaacgttat
     8461 caataaactc aaagcacaaa acttcatcag cattgatgaa caggaaaccg tttcctacca
     8521 tctcagtgat aatgatttgt tacaaagaat ccaacgccat attttaagcc aacgtcccaa
     8581 aacctacgct gattttcaag ccgtcgtgca aaaccgagca gatgcacttc acttaacagt
     8641 cggtaccaac gacattcaat cctttgcgcg acatttgcgc gaccaaaacc tgatccgcca
     8701 aaacaatggg aaaattgaat atgcaccgtt tactgaacct aaaccacagc caacgcccaa
     8761 gcagcctaaa aaaaccgcat gggaacctga tgaaattatt tggaaaaaag tgattgccgc
     8821 gttatcgtta aagaaccgtc ctaataaaac caaaacttta cgcaatacaa tccaggcact
     8881 cacaaaatcc aatgcacaag aaactgacaa actgctacaa catttacaag atacccaagt
     8941 cctacgtatt gacggtacta aaattgtgta tatcaagtag gatgggcatt tatgcctgac
     9001 ctacaaaacc aaaaacaacc taccaccctt aatcaactcc acaaaccctt ttcagacaac
     9061 ctcgtttttt gaaaaacaat ctgtaaacag atagctgctg aagaataccg ttgccgagcc
     9121 ccaaaacccg tcctgcaact tttattgtga acttcccatt atgaaaaaat cccttttcgt
     9181 tctctttctg tattcgtccc tacttactgc cagcgaaatt gcttatcgct ttgtattcgg
     9241 aattgaaacc ttaccggctg caaaaatggc ggaaacgttt gcgctgacat ttgtgattgc
     9301 tgcgctgtat ctgtttgcgc gttataaggc gacgcgtttg ttgattgcgg tgttttttgc
     9361 gttcagcatt attgccaaca atgtgcatta cgcggtttat caaagctgga taacgggcat
     9421 taattattgg ctgatgctga agagattacc gaagtcggcg gcgcgggcgc gtcgatgttg
     9481 gatcagttgt ggctgcctgc gttgtggggc gtgttggaag tcatgttgtt ttgcagcctt
     9541 gccaagttcc accgtaagac gcatttttct gccgatatac tgtttgcctt cctaatgctg
     9601 atgattttcg tgcgttcgtt cgacacgaaa caagagcacg gtatttcgcc caaaccgaca
     9661 tacagccgca tcaaagccaa ttatttcagc ttcggttatt ttgtcggacg cgtgttgccg
     9721 tatcagttgt ttgatttaag caggattccc gcctttaagc agcctgctcc aagcaaaatc
     9781 aggcagggca gtgttcaaaa tatcgtcctg attatgggcg aaagcgaaag cgcggcgcat
     9841 ttgaagctgt ttggctacgg acgcgaaact tcgccgtttt taacccggct gtcgcaagcc
     9901 gattttaagc cgattgtgaa acaaagttat tccgcaggct ttatgactgc agtgtccctg
     9961 cccagttttt tcaatgcgat accgcacgcc aacggcttgg aacaaatcag cggcggcgat
    10021 accaatatgt tccgcctcgc caaagagcag ggctatgaga cgtattttta cagtgctcag
    10081 gctgaaaacc aaatggcaat tttgaactta atcggtaaga aatggataga ccatctgatt
    10141 caaccgacgc agcttggcta cggcaacggc gacaatatgc ccgatgagaa gctgctgccg
    10201 ttgttcgaca aaatcaattt gcagcagggc aagcatttta tcgtgttgca ccaacgtggt
    10261 tcgcacgccc catacggcgc attgttgcag cctcaagata aagtattcgg cgaagccgat
    10321 attgtggata agtacgacaa caccatccac aaaaccgacc aaatgattca aaccgtattc
    10381 gagcagctgc aaaagcagcc tgacggcaac tggctgtttg cctatacctc cgatcatggc
    10441 cagtatgttc gccaagatat ctacaatcaa ggcacggtgc agcccgacag ctatctcgtg
    10501 ccgctagtgt tgtacagccc ggataaggcc gtgcaacagg ctgccaacca ggcttttgcg
    10561 ccttgcgaga ttgccttcca tcagcagctt tcaacgttcc tgattcacac gttgggctac
    10621 gatatgccgg tttcaggttg tcgcgaaggc tcggtaacgg gcaacctgat tacgggtgat
    10681 gcaggcagct tgaacattcg cgacggcaag gcggaatatg tttatccgca atgagtggcg
    10741 taaaaaccaa taaagacaaa tttagatgat gtcggggaag atgcccgacc gacaagacta
    10801 tgcaaaatat gaaaaaccaa gtacgcggat caggcatgga tgcccgatcc aatccggtca
    10861 atgtttcaga cggcctgcaa aacagttcgg gtcatatcgg taccaacacg cgttaccgcc
    10921 tgaccaaact cggcgaacaa atggcgcgcc tgcccatcga cccgaaaatc gcgcgcattt
    10981 tgctggcggc gaagaaacac gactgcatgg cggaaatatt ggtgatagcg tccgcgctgt
    11041 cgattcaaga cccgcgcgag cggccgttgg aagcgcgcga tgccgccgcc aaggcacacg
    11101 agcgttttac cgacaagcaa tccgacttcc ttgcctatct gaacatttgg gacagcttcc
    11161 agcgcgagcg cgacaaaggt ttgtccaaca agcagttggt gcaatggtgc cgtcaatatt
    11221 tcctgtcgca cctgaggatg cgcgagtggc gcgagttgca ccaccagctt gcccaaaccg
    11281 cgattgaaat gggtttgacc accaaggaag cggctttcag acggcctccc gaaatcaggc
    11341 agctcacgtc gtctgaaagc caaggcgacc aagatttggc ggccaaactc aaacaaaaac
    11401 aactggataa gaagcaacac cgcgcccaaa tccgcgccgc caaagaagcg ggctacgaac
    11461 aaatccaccg cgccctgctg accggcctta tcgccaacgt cggcatgaaa tcgcccgacg
    11521 gcaacgacta caccggcgca cgcggcagcc gttttcatct tttcccggca tcagccctgt
    11581 tcaaagccaa gcccaaatgg gtgatggcgg cagaattggt tgaaaccacg cgcctttacg
    11641 cgcgcgacgt cgccgttatc cagcccgaat ggatagagca ggaagcgccg cacctcgtcc
    11701 gctatcatta tttcgagccg cattgggaac aaaaacgcgg cgaagtcgtc gccagcgaac
    11761 gcgtgacgct ttacggtctg accgtattgc cgcgccgccc cgtgccttac ggcaaagttg
    11821 cgcccgaaga agcacgcgaa atctttatcc gcagcgcatt ggtggcgcag gaatgcgatt
    11881 tgaaagcgga tttttttgtc cacaacaaaa agctgattaa agaaattacc gaactcgaac
    11941 acaaatcgcg caagcaagac gtattggtcg acgacgaagc cctgtttgcg ttttatcacg
    12001 aacggctgcc caatttttat acggcggacg cggtttcaga cgacctgcat cctacaaatc
    12061 cgcagcaaac tgccccctcc cccgtggggg agggctgggg agagggcaaa acagttgccg
    12121 cacaaaccaa cttttccgca accgcagcaa accctctccc taaccctctc ccacaggaga
    12181 gggagcagag tgccgcagct tcagcggttt caaacgacct gcatcctgca aatccccaac
    12241 aaaccgcccc ctcccccgtg ggggagggct ggggagaggg caaaacagtt gccgcacaaa
    12301 ccaacttctc cgcaaccgca gcaaaccctc tcccacagga gggggaacag agtgccgcag
    12361 cttcagcact ttcagacgac cctcaacccc aaaagcagcc agcatctcaa aaaggccgtc
    12421 tgaaacccct ccccctcgcc gacatccgca ccttccaagc ctggctcaaa accgccgaac
    12481 gcgagaaccc gcgcctgctg ttcctcagcc gcgacgattt gatgcaacac gccgccgcac
    12541 acattaccga agaacaattc cccaaattct ggcaaaccgc agacggcaaa ttcaaactca
    12601 gctaccgctt cgagccgcac cacccgctcg acggcgttac cctcaccctg ccgctcaccg
    12661 tgctcaaccg catcagcccc gccgccctcg aatggctcgt gcccggtatg ttgcgcgaga
    12721 aaatccagct gctgattaaa gcactgccga agcaaatccg ccgcatttgc gtgcccgtac
    12781 ccgatttcat taccaaattt ctcgaaagca atcccgaccg ccaagcggcc atcattcccc
    12841 agttggcgca ctttatcgcc aaaagcgcag gcgatatgcg gattttcgag caaatcgacc
    12901 aagacgcatg ggcggtgcaa gaattgcccg aacactgcta tctgaatctg cgcattatcg
    12961 acgacggcgg acaagagctt gccggcggcc gcaaactgca cgaattgcaa caacagctcg
    13021 gccaagccgc cgccaccacc ttccgcgaca acacccaaga attcgagcgc gacaacgtta
    13081 ccgcatggga catcggcacc ctacccgaat ccatcaaatt cgcacgcggc aaacaacagc
    13141 tcaccggcta tctcggtctg caaaaagaaa aagacggccg catcgccctg cgcctgtgtg
    13201 acaccatcga agccgccgag caggcacacc gtcaaggcgt catcgaattg atgaagctgc
    13261 aattaaaaga gcaggtaaaa gacctgaaca aaggcatcca aggcttcacc caagccgcca
    13321 tgctgctcaa acacatcaac gccgacaccc tgcgcgacga cctcacccaa gccgtctgcg
    13381 accgcgcctt tatcggcgaa gacgagctgc cgcgcaacga aaaagccttc aaagaacaaa
    13441 tcaaacgcgc ccgcagccgc ctgcccgccg tcaaagaagc tctcagtcgt tacctgcagg
    13501 aaaccgccgc cgcctatgcc gaactgaacg gcaaactcgg caaacacccg ctcacccatc
    13561 tcctaagact acgcctgcaa accctgcttg cccccagctt cgccacccgc accccgtggg
    13621 cacaatggcc gcgcctcccc atctatctca aagccatgac cctgcgcctc gaaaaataca
    13681 gcagcaaccc cgcccgcgac gcagcccgcg aagccgatat ccaagagctg gaacaaatgt
    13741 ggcaggaaaa aaccgatagc ttggtgaaac aaggattgcc catttcagac ggccttgcag
    13801 ggtttaaatg gatgattgaa gaattgaggg tgtcgctgtt tgcgcaggaa ttgaagacac
    13861 cgtatccggt gtcggtgaag cggctgatga aggagtggga gaggttgaat aagtagtgat
    13921 attatccaat acatttacag gaaaatttct aacttacata aaaggtacaa ctcaatgaaa
    13981 agcgaaaata attatgaacg tattgttcaa aattctaaaa aattccaaca ctctcagaag
    14041 aatgagatgc agaaacgcat aacagatttg ctgcaacaac tcacaaatgg cattcatgaa
    14101 cgcgaccaaa ttatggcggt ttccctactt ggtgcgattg ccggacataa tactttccta
    14161 tttggaccgc cgggaaccgc gaaaagtctg atttcccgcc gtttggcatg tgcatttgaa
    14221 aatccgcaat actttgaata cttgatgaac cgtttcagca cacctgaaga agtattcgga
    14281 cctgtatcta ttaaggcatt gaaagaagac cgatatctcc gaaaaatcga aggctatttg
    14341 ccaactgccg attttgcatt tttggatgaa atttggaaat ccagtcctgc aattttgaat
    14401 aacctgctga ccattatcaa cgagcatatt tttaaaaacg gcgatgagag gtttaatgtg
    14461 ccacttaaag ccctgattgc ggcttccaac gaaattccac ctgaaaatca aggtttagag
    14521 gcactgtatg accgctttat tatccgtctg cttgtgccgc cgattgaaca agaagagaac
    14581 ttcaaccgtt tgctggatag caaaccaagc agcgacaaac ctgaaatcag tgaagattta
    14641 cggattagtt atcatgagct tgccaaatgg cgtgaacaac tccacaaagt caggctaagt
    14701 acagatacat tactgattat taagtatatc agagaagaat tagcagccca gtttgataag
    14761 ttaggcgttt atgtatccga ccgacgttgg caacgtgcag ccgtattatt aaaggcttct
    14821 gctttttgca atggacgcaa agaaaccaat catagcgatg tgatcttgct gaaatattgt
    14881 ctgtggacaa cacctgaaaa tcgagagtca gtggaacaaa ttgtgatgaa tgccattaaa
    14941 tcctgtgggt ttgatacagg tattgatctg gctgaattag atagagaaaa agagagtttg
    15001 gataaggaaa taaataagga actttatcat tcacaagatg tttatgagac ggttgaaatg
    15061 agtggaaaaa aatattttcc agtacaggct gttttcaaaa acgtacataa tagtcatgct
    15121 aataaagaac ttaagattta tgttccatat agcaaatttc gtagtaaaga aaaattttat
    15181 ccaatagata gtacaggaaa tgaaattcaa gaaattgaat gtgaatttga tgggcaaggt
    15241 tgctgtaaat tggaattgaa agtgcggggt ggtcactgga atgagcaata taagccatta
    15301 aaatttaaac ccaatatctt atttcacaaa ggagataaaa aatcagatgt taacgaacgt
    15361 ctaattcatt cactaaccca atctatatct gatattcgca aacaattgat tgatacacag
    15421 aaacaagttg agaaaaaata cgaaaaatac cagcagtacc tgcaaagccc ctttgttgcc
    15481 caagcagata ttgatgttgc tatatcaggt attctagacc aaatcgataa actcaatttg
    15541 cggattaaag actgcgaacg tttggagtct ttatgtcgtt aaacagaaaa ttatccgaac
    15601 aaataagatg gattaaagct tctctacaaa tagattatgc agatttattt aaacagcatg
    15661 gttcgttaaa tggacagatt cagcaacgtt tatcagattg gcaatatcag gccaaactgg
    15721 ctttgttgca gaaaaaccca tttatattac atgaagaaaa gctaaaaaaa caccaacaaa
    15781 cagaaatttt taatcaacag tctgttgatg attatcggta tttttgcaaa ttagcaggcg
    15841 tgccatttga aaaagaattc tggcagcagg aattaacaca aagcaaaaat tcaaaaccca
    15901 ataaacagaa tttgcctttg aaattgctaa caggaaaatg gcagcagcaa ttagactatg
    15961 ccaaatctca atggtattta aagcaactta atcaattacg acaggaattt atagataagt
    16021 taaaacagga actcgacact atccgacagc ttgcagaaca gttagagcaa tttggttttg
    16081 aagcagggct gtggtttgat aacagtatcg gcaatttaag ccagcaaaat attgaagaaa
    16141 tgaaacgctg gctgaattac ttgacccaag ataagaatgc ccaacagatt gctgaattac
    16201 taggcaaaat gcgccaaatc gaacaatctg aaaaaatcga acaggtaaaa cagactgttt
    16261 acacaaaaag cccacaaatt gatgtgaatt cgcgtgaaga aattatcgga ttacgtttag
    16321 gtaaagattt agagtatgta ttgccgtctg aattggcttt aatggcagat gaagaaacat
    16381 cgactttatt tgatttgaag tttttggaat ccaaattaat gtgttttgaa ttgcaaggaa
    16441 tgacctattg cgatgcccca actgaaatta tagttgaaca aaaaagccaa gaggatgaaa
    16501 agctcggacc aatgatttta tgtgtagata ccagtggttc aatggttggt ctacctgaaa
    16561 atattgccaa agcaatggct ttatttttag gagcaaaagc taaaagcgaa aaccgttctt
    16621 gttttgttat caatttttcc actggaatag aaacttttga attaacaagt aaaacaggga
    16681 tttccaattt gattgctttt ttacgtcaat cctttcatgg tggtacagat gctgccccag
    16741 ctttacgtca tgcgctaaaa atgatggagc aagaaatcta tcaaaaggca gacttattaa
    16801 tgatttccga ttttgtgatg aacagcttac ctgatgattt gttggcatca atcgaaatac
    16861 aacgagaaac cggtaatcag tttaattctt tggttattgg tgatgctttt atgagtaaac
    16921 gcctaaaaac acattttgat cgtgagtgga tatacaatcc taatgttcag acaattcaag
    16981 aattagtaca gttcaagaaa gatattttca ataaacaagt tgtcaactca taacactatc
    17041 ctactcatat gtatttttgg aagataccac cctatacaac ttggaatcca tacgcagaat
    17101 atgtgtggac tttctaaact actccccttt ccaccctaaa aaaggtcgtc tgaaacccat
    17161 tttcagacga cctttttcca cttcgcaaaa caagaattcc cacccctctc cccaaacgtc
    17221 gcccgaacca gtaaactccc catatttcaa caacttcttg gaagccaacc atgccccgta
    17281 tccaccctcc tcacctgttc ccgccccata tcgccgaacg cggccttttg tattttcagc
    17341 agggcaaggt tcgcgatgtc cgaaaaactt ccgccgggcg ttatcgggcc tggcgccgtt
    17401 tgctgccggc ggtctgaata atggtggcgt caacgacggc agcggatgct ttctctactt
    17461 ttaggttttt ttcggtcagt tggcggttaa tcagtttgag caattcggac agggtgtcgt
    17521 cttgcgccag ccagttgcgg taacggcata aggtgctgta atcggggatg ctcagttcgt
    17581 caaagcggca aaacaggttg aagtcgatgc gggtgatgag gctgtgctcg agttcgggat
    17641 cggagaggct gtgccattgt ccgagcagaa cggctttgaa catggacaac agcgggtagg
    17701 cgggacgacc gcggtggtct cggaggtaac gggttttttg acggttcagg tattgttcga
    17761 tcggttgcca atcaatcacc tggtccaact tcaatagtgg gaaacggtcg atgtgtttgg
    17821 caatcatggc ttgggcggtt tgctgaaaga aggtgctcat gagaaatctc ctaaatgtct
    17881 tggtgggaat ttaggggatt ttggggagtt ttgcaaaggt ctcagtcttt ttaaaccaca
    17941 gcccttccca actaaaccaa aaggtcgtct gaaccctatt ttcagacgac cttttgccac
    18001 tttgtaaaac aaatcttccc accatcctct ccccaaacat cgcccgaacc agtaaacttc
    18061 tcatatttca acaacttctt ggaagcaaac catgccccat atccacccgc tccacctgtt
    18121 cccgccccat atcgccgaac gcggactgct ctattttcag cagggcaaag ttggtgctgt
    18181 ccaaaaaact tccaccgggc gttatcgggc ggaggtatgc ggtttggaaa actattgggt
    18241 atggctgaag ctggatagtg atttgtatat taaagacgaa agctgcgatt gcccttatgt
    18301 ctaaaggtgc aaacatacct taaattacta tattacatag gcaaaataca agcctataac
    18361 gaattggaaa caaaatgccg tctgaaagca ttataaaatc tgttcacctt ttcagatgag
    18421 taatgtacac ccctatacaa tttttgctac tttaccccat aaatccacgg ctaaagatat
    18481 ccttattatg tcctatgatt tatcgaaacg acttgtaatc ggcttagcat caagtgccct
    18541 attcgactta tccgaatcgg ataatatatt tagaatggaa ggggcagaaa cctataggca
    18601 atatcagaga gaaaaacaaa accatcccct aaaaaaggcg ttgtctttcc atttattaaa
    18661 aaacttctgt caatcaatga aataaaccca aacgacccaa cgattgggtt tattctttta
    18721 tccagaaaca atccagatac agattacgag tcataactat aggcttaata ttacacgatt
    18781 ctcattccat caaggcggaa aaccgcacaa atactgaaac actatcgatc gatttgtaaa
    18841 caagcctact taagtaactt gcagtcctta tcatttcctt taaaataatc cagcccgtca
    18901 ctacacgaac tggcggactt cttgcaaata aaggttacta gattttcatt catcttaata
    18961 ataaaaggat ttttatcttt atctatggct accgccttca acatgaattt actgtctaag
    19021 gccccgcgcg cgattccatt caaacggata caaaagcctt ctgcctcttt aatcggcaaa
    19081 cttggccatt tggtagatgt ttgtttaaat ctcccattct gcagataaaa cttttccata
    19141 aaatgtgcat tttctaacaa ggctgcccgc actgcattta tctttgcttt ctcaacataa
    19201 ttgcgatagc tcggataaac aattaaagca agtacagaca atatcaagac cactgatatt
    19261 aattcaacca gcgtaaaccc ccgattatca gtcattactt tacttccaat aagaacagat
    19321 tattcaacat atttctttga acagacttac tatcccattc agcagtatgc atatttccca
    19381 c
//
LOCUS       DBBZYD010000033        18837 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.033, whole genome shotgun sequence.
ACCESSION   DBBZYD010000033 DBBZYD010000000
VERSION     DBBZYD010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18837
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.033"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     regulatory      64..167
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            234..1460
                     /gene="cytX"
                     /locus_tag="ACJJDL_000954"
     CDS             234..1460
                     /gene="cytX"
                     /locus_tag="ACJJDL_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HGG7573685.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARRTGGLKTVSMLLMLLAV
                     LWLSVEVFASSGTNAAPAVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATL
                     TATLAYTLTSCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDA
                     YSAGVSANNISAKLSETPIAVAVAVVGTLLAVLLPVTEYENFLLLIGSVFAPMAAVLI
                     ADFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVL
                     VRLFFKKTQSLQRNPS"
     gene            1457..2557
                     /locus_tag="ACJJDL_000955"
     CDS             1457..2557
                     /locus_tag="ACJJDL_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HGG7573686.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVIKLGRQSIPLWRGIRCRLKTPAMMQENGSLIVWHGQDKPL
                     SNEFVRHLKRGGVADDEIVRWRTDDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTVWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSRKRRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            2578..3195
                     /gene="thiE"
                     /locus_tag="ACJJDL_000956"
     CDS             2578..3195
                     /gene="thiE"
                     /locus_tag="ACJJDL_000956"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HGG7573687.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKALHGDE
                     LKREIARCVAACQGSHTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYIASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
     gene            3617..3811
                     /gene="thiS"
                     /locus_tag="ACJJDL_000957"
     CDS             3617..3811
                     /gene="thiS"
                     /locus_tag="ACJJDL_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HGG7573688.1"
                     /translation="MNIILNGEPAELHGTTVADLIAQTAPQKPFAVAVNTGFVAKGAY
                     AETVLNENDKIDIVRPVVGG"
     gene            4025..4813
                     /locus_tag="ACJJDL_000958"
     CDS             4025..4813
                     /locus_tag="ACJJDL_000958"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HGG7573689.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRIAQPAMITVSLRR
                     AGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(5576..6400)
                     /locus_tag="ACJJDL_000959"
     CDS             complement(5576..6400)
                     /locus_tag="ACJJDL_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HGG7573690.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(6513..8291)
                     /locus_tag="ACJJDL_000960"
     CDS             complement(6513..8291)
                     /locus_tag="ACJJDL_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HGG7573691.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            complement(8288..8794)
                     /locus_tag="ACJJDL_000961"
     CDS             complement(8288..8794)
                     /locus_tag="ACJJDL_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HGG7573692.1"
                     /translation="MVDAWSVPDFESKICPPEALSERLARLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKDGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            complement(8930..9005)
                     /locus_tag="ACJJDL_000962"
     tRNA            complement(8930..9005)
                     /locus_tag="ACJJDL_000962"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8970..8972),aa:His,seq:gtg)
     gene            complement(9033..9109)
                     /locus_tag="ACJJDL_000963"
     tRNA            complement(9033..9109)
                     /locus_tag="ACJJDL_000963"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9073..9075),aa:Arg,seq:tct)
     gene            complement(9134..9211)
                     /locus_tag="ACJJDL_000964"
     tRNA            complement(9134..9211)
                     /locus_tag="ACJJDL_000964"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9174..9176),aa:Pro,seq:tgg)
     gene            9434..10288
                     /gene="folD"
                     /locus_tag="ACJJDL_000965"
     CDS             9434..10288
                     /gene="folD"
                     /locus_tag="ACJJDL_000965"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HGG7573693.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            complement(10350..10931)
                     /locus_tag="ACJJDL_000966"
     CDS             complement(10350..10931)
                     /locus_tag="ACJJDL_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG7573694.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            11108..12223
                     /gene="asd"
                     /locus_tag="ACJJDL_000967"
     CDS             11108..12223
                     /gene="asd"
                     /locus_tag="ACJJDL_000967"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HGG7573695.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMQEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKTNF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIETILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLEMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            complement(12316..12846)
                     /locus_tag="ACJJDL_000968"
     CDS             complement(12316..12846)
                     /locus_tag="ACJJDL_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7573696.1"
                     /translation="MESFELEDLTLWLVRDADEAEMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLQTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHAFQRVRCPCRAALVVPEHGGVPHGWAQRQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(12856..13200)
                     /locus_tag="ACJJDL_000969"
     CDS             complement(12856..13200)
                     /locus_tag="ACJJDL_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573697.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPIWALVWLLICLPCLLIASKCLGWKGWRLLANVLACLAVRTLLSVPAT
                     LLIAFTLQDLLK"
     gene            complement(13187..13966)
                     /locus_tag="ACJJDL_000970"
     CDS             complement(13187..13966)
                     /locus_tag="ACJJDL_000970"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG7573698.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            complement(14137..15558)
                     /gene="cysS"
                     /locus_tag="ACJJDL_000971"
     CDS             complement(14137..15558)
                     /gene="cysS"
                     /locus_tag="ACJJDL_000971"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HGG7573699.1"
                     /translation="MTTIYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            complement(16246..17295)
                     /locus_tag="ACJJDL_000972"
     CDS             complement(16246..17295)
                     /locus_tag="ACJJDL_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG7573700.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            complement(17378..18532)
                     /gene="obgE"
                     /locus_tag="ACJJDL_000973"
     CDS             complement(17378..18532)
                     /gene="obgE"
                     /locus_tag="ACJJDL_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HGG7573701.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTG
                     ENVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
BASE COUNT         4259 a         5337 c         4852 g         4389 t
ORIGIN      
        1 atgcgccgtg ccgccgaaaa tgtaagaatt ttgccaacgc acgttgcttt gtgtaaactt
       61 aaagctttct tgtcggagtg ccgccgccgg gcggctgaga ttgcgaaagc agaatccgta
      121 gaacctgtcg gggtaatgcc tgcgtaggaa acaaaccgtc aaatgcctta tcgggcttcc
      181 gttccctttt ccgcacttcc ccgcccacct tccttctttt taaaggacgt catatgtcgg
      241 gcaatgcctc ctctccttca tcttccgccg ccatcgggct gatttggttc ggcgcggcgg
      301 tatcgattgc cgaaatcagc acgggtacgc tgcttgcgcc tttgggctgg caacgcggtc
      361 tggcggctct acttttgggt catgccgtcg gcggcgcgct gttttttgcg gcggcgtata
      421 tcggcgcact gaccggacgc agctcgatgg aaagcgtgcg cctgtcgttc ggcaaacgcg
      481 gttcagtgct gttttccgtg gcgaatatgc tgcaactggc cggctggacg gcggtgatga
      541 tttacgccgg cgcaacggtc agctccgctt tgggcaaagt gttgtgggac ggcgaatctt
      601 ttgtctggtg ggcattggca aacggcgcgc tgattgtgct gtggctggtt tttggcgcac
      661 gcagaacggg cgggctgaaa accgtttcga tgctgctgat gctgcttgcc gtgttgtggt
      721 tgagcgtcga agtgttcgct tcgtccggca caaacgcagc ccccgccgtt tcagacggca
      781 tgagcttcgg aacggcagtc gaactgtccg ccgtcatgcc gctttcctgg ctgccgcttg
      841 ccgccgacta cacgcgccac gctcgccgtc cgtttgcggc aaccctgacg gcaacgctcg
      901 cctacacgct gacgagctgc tggatgtatg ccttgggttt ggcagcggct ctgtttaccg
      961 gagaaaccga tgtggcaaaa atcctgctgg gcgcaggttt gggtgcggca ggcattttgg
     1021 cggtcgtcct gtcgaccgtt accaccactt ttctcgatgc ctactccgcc ggcgtaagtg
     1081 ccaacaatat ttccgccaaa ctttcggaaa cacccatcgc cgttgccgtc gccgttgtcg
     1141 gcacactgct tgccgtcctc ctgcccgtta ccgaatatga aaacttcctg ctgcttatcg
     1201 gctcggtatt tgcgccgatg gcggcggttt tgattgccga ctttttcgtc ttgaaacggc
     1261 gtgaggagat tgaaggcttt gactttgccg gactggttct gtggctggcg ggcttcatcc
     1321 tctaccgctt cctgctctcg tccggctggg aaagcagcat cggtctgacc gcccccgtaa
     1381 tgtctgccgt tgccattgcc accgtactgg tgcgcctttt ctttaaaaaa acccaatctt
     1441 tacaaaggaa cccgtcatga cccgtatcgc catcctcggc ggcggcctct cgggaaggct
     1501 gaccgcactg cagcttgcag aacaaggtta tcagattgca cttttcgata aaggctgccg
     1561 ccggggcgaa cacgccgccg cctatgttgc cgccgccatg ctcgcgcctg cggcggaagc
     1621 ggtcgaagcc acgcctgaag tcatcaaact gggcaggcag agcatcccgc tttggcgcgg
     1681 catccgatgc cgtctgaaaa cacctgccat gatgcaggaa aacggcagcc tgattgtgtg
     1741 gcacggacag gacaaacctt tatccaacga gttcgtccgc catctcaaac gcggcggcgt
     1801 agcggatgac gaaatcgtcc gttggcgcac cgacgacatc gccgaacgcg aaccgcaact
     1861 cggcggacgt ttttcagacg gcatctacct gccgaccgaa ggccagctcg acgggcggca
     1921 aatattgtct gcacttgccg acgctttgga cgaactgaac gtcccctgcc attgggaaca
     1981 cgaatgtgcc cccgaagacc tgcaagccca atacgactgg ctgatcgact gccgcggcta
     2041 cggcgcaaaa accgtgtgga accaatcccc cgaacacacc agcaccctgc gcggcatacg
     2101 cggcgaagtg gcgcgggttt acacacccga aatcacgctc aaccgccccg tgcgcctgct
     2161 gcacccgcgt tatccgctct acatcgcccc gaaagaaaac cacgtcttcg tcatcggcgc
     2221 gacccaaatc gaaagcgaaa gccaagcccc cgccagcgtg cgttcagggt tggaactctt
     2281 gtccgcactc tatgccgtcc accccgcctt cggcgaagcc gacatcctcg aaatcgccac
     2341 cggcctgcgc cccacgctca accaccacaa ccccgaaatc cgctacagcc gcaaacgccg
     2401 cctcatcgaa atcaacggcc ttttccgcca cggtttcatg atctcccccg ccgtaaccgc
     2461 cgccgccgtc agattggcag tggcactgtt tgacggaaaa gacgcgcccg aacgtgacga
     2521 agaaagcggt ttggcgtata tccgaagaca agattaaagc cgtctgaaag gaaccccatg
     2581 accttcccgc cactcaaatc cccgctcaaa ttctacgccg tcgtccccac cgccgattgg
     2641 gtggggcgca tggtcaaagc aggtgccgac acggtgcaac tgcgctgcaa ggccctgcac
     2701 ggcgatgaat tgaaacgcga aatcgcccgc tgtgtcgccg cctgtcaggg cagccatacg
     2761 cagcttttca tcaatgacca ctggcgcgag gcaatcgaag caggcgcgta cggcgtgcat
     2821 ctcggacaag aagacatgga caccgccgac cttgccgcca tcgccgccgc cggtttgcgc
     2881 ttgggtttga gtacgcactc cgttgccgaa ctcgaccgcg ccctgtccgt acaccctagc
     2941 tacatcgcca gcggcgcgat tttcccgacc acgaccaagc aaatgcccac cgccccgcaa
     3001 ggcttggaca aactgtgcga atacgtcaaa caggcaggcg gcacgcccgt cgtcgccatt
     3061 ggcggcatcg atttgaacaa cgcccgagcc gtactcgcca ccggcgtttc ctcactcgcc
     3121 gccgtccgcg ccgtaaccga agcggcaaat cccgaagcgg tggttaaagc gtttcaggct
     3181 ttgtgggatg gataaaaccg aaagaagaaa attcaattgc cgtgtaggca aaacttagcc
     3241 cgttatcgca aacatactta actttaaatg tggcatatca tcaaattccg tcattcccgc
     3301 gcaagcggga atccgcctta aaacttgaga aaccatcatt tgaaaaacag tttccgaatt
     3361 tcaaaaatgg attcccgcct gcgcgggaat gacggcaacc ggccggttgc gtatcaaaaa
     3421 ataaagtaat tcggctagat atagtggatt aacaaaaatc aggacaaggc gacgaagtcg
     3481 cagacagtac agatagtacg gaaccgattc acttggtgct tcagcacctt agagaatcgt
     3541 tctctttgag ctaaggcgag gcaacgccgt actggttttt gttaatccac tataaataca
     3601 gaaacatcga gaaaccatga acatcatctt aaacggcgaa cccgccgaac ttcacggcac
     3661 gaccgttgcc gacctcatcg cccaaaccgc gccgcaaaag ccttttgccg tagcggtgaa
     3721 taccggattt gtcgccaaag gcgcgtatgc ggaaaccgtt ttgaacgaaa acgacaaaat
     3781 cgatatcgtg cggccggtgg tcggcggcta ggcggttttg ccttttcaga cgacccctgt
     3841 ccccaaaaca acgttatggt ggattaactt taaatcagga caaggcgacg aagccgcaga
     3901 cagtacaaat agtacggaac cgattcactt ggtgcttcag caccttagag aatcgttttc
     3961 tttgagctaa ggcgaggcaa cgccgtactg gtttttgtta atccactata caaaggaacc
     4021 cattatgctc accctatacg gagaaacttt cccttcacgg ctgctgctcg gcacggctgc
     4081 ctacccgacc cctgaaatcc tcaaacaatc cgtccgtatc gcccaacccg cgatgattac
     4141 cgtctcattg cgccgcgcgg gaagcggcgg cgaggcgcac ggtcaggggt tttggtcgct
     4201 gcttcaagaa accggcgttc ccgtcctgcc gaacacggca ggctgccaaa gcgtgcagga
     4261 agcggtaacg acggcgcaaa tggcgcgcga agtgtttgaa accgattgga taaaattgga
     4321 actcatcgga gatgacgaca ccttgcagcc ggatgtgttc cagcttgtcg aagcggcgga
     4381 aatcctgatt aaagacggct tcaaagtgct gccttattgc accgaagacc tgattgcctg
     4441 ccgccgcctg ctcgacgcgg gctgtcaggc gttgatgccg tgggcggccc cgatcggcac
     4501 gggtttgggc gcggttcacg cctacgcgtt gaacgtcctg cgcgaacgcc tgcccgacac
     4561 gccgctgatt atcgacgcgg gcttgggttt gccctcacag gcggcacaag tgatggaatg
     4621 gggctttgac ggcgtgcttt tgaatactgc cgtttcccgc agcggcgatc cggtcaatat
     4681 ggcacgcgcc ttcgcactcg ccgtcgaatc cggacggctg gcatttgaag ccggaccggt
     4741 cgaagcacgc gacaaagcgc aagccagcac gccgacagtc ggacaaccgt tttggcattc
     4801 ggcggaatat tgaaaaaggc ggcaaaaatg ccgtctgaag gcttcagacg gcatcgcggt
     4861 ccaaaacggc ggcggcctga aacggacaaa ccgccattcc ccggcatcac ggctttgtcg
     4921 gaaaaaatgg aaaaaccggc cgaaaaacct tgccgcccgt cccgatgccg caaccaacga
     4981 aacactcggc ctccacggtg tgcaggctgc cgcgcaagcc ctaaatacgg caatagaaga
     5041 agcgttttgt tgttgtttga atacacttaa aaatacctaa agccgtccgt aagccttcat
     5101 ccgcaacggt tttaccgctt tcgcatcccc gaatccacgc tcaaacaccc ccgaatgaca
     5161 accctgtccg cgccaaatcg gacggatgtt caaacacggc aggcttattt ccgtcaggca
     5221 cgaagccctc agctatgact gccgaccccg atttgtccga cacaatgaaa gtttgccgac
     5281 ccgaatcaca aacatcggcg gacaggttaa tttgtttatt tttcatcgta ttacaaaaaa
     5341 tccgcattta tttttaaatt tttattgata attattatta ttagcgtata atcaaaacca
     5401 ctcggaagtc gtccattccg aaccattaaa cactgtattc cctcacaatt cactttcaca
     5461 cttggagtcg gcatatacga gacatacatt ccctttttat atatcagata ctcaaaaccg
     5521 aaacgccaaa cccaccttcg cggtgggttt ggcgtttatc gtccggcttt cgcgcctatt
     5581 tgcaagactt gaggttcagt ttgccgtata gggacgtgat tttacgaatt tcgtccgcat
     5641 cggcggcatt cacgccggta aacaaaaccg tcatacgcga cacgctcaaa gaatcgtcct
     5701 gcctgtcggc ttcggcaaag tgttcgacaa tatgcgcccc gccgaatccg gcgccggcaa
     5761 gccggttttg cagggcttgg gcgttttccc ggctgttgcc gacacccaaa ctcaatgcgc
     5821 cgtcaaacgg tatggggttg aaacctttgg cagacagctc cgccgcctga ttttcggcat
     5881 cggcggaaac gggcaggacg acgcggtagg ttttgtcggc aggtttggct ttggcggtgc
     5941 gtttttcgac gctcctgctg gcaacgtgcg accatttgcc caaaagccct ttgatgcggt
     6001 ggtagtcgtc ttcgtccatc gtgaggcttg cctgcgcggc gcataaggca tccgccgcgc
     6061 cgttttcgcg ttccgcctgc gccttttcgg cggcgagttt ttcgcggcgg gctttttctt
     6121 cacgctgttt tttctccctc agttttttct gttccgcttc ctttttcaag cgcaactgct
     6181 cggcctgctc ttcggtcagg atgtcgcccg gtttgagcag tgccgccgta tcctccacgg
     6241 atgccgccgc attgtcggcg gcgggcgttg cggggggcgt gttttcgacg gcccggtttt
     6301 ccggcacgcc gcccgtcgct ttaacggcca atttatagcc caccgtgccg ccgaatacgg
     6361 caatattgag taccgccaaa agggtgaaga gccatttcat tagaatttcc tcaatgtttg
     6421 aaaccccgcc cgcctgggcg gcagtctgtc gggcggcaga atccggacgg attcggacgg
     6481 atgccgcccc gtgttgaaaa agggtgtatt ttttaagtat gttccgattc cccgccttcg
     6541 gcggcaatca ggttcagcag cccgtgaatg acgaggttgt ccgccacgcg cacggtattt
     6601 tccgccaaaa atgcaggcgg cagggcttcg gcaacttttg ccgcgccgcc gccggtaatg
     6661 atgacatcga caggcttgcc cgccccggtt ttttctttca aacgcccgtg catcatcata
     6721 accgagccgc aaaccgcatc catcatgccg ctggcgacgg cattgcccgt tgtggtcggg
     6781 aaaggataac gcttaccggc gtgccggttg aggttggcgg ttcggacggc gagcgattct
     6841 ttcatcaggt ggaaaccggg catgatggtt cccccgagat aatgtccgtc atcggtgagc
     6901 gcgtcaaccg ttaccgccgt gccgcaactg acgacgacgc aggcgttgcg gctgaagcgg
     6961 cggctgccca aggcgttgaa ccagcggtcg gaaccgtgtt cttcggggtg gcggtagtgg
     7021 ttgcgtatgc ccaaagcctg tgcggaagac ggcagccact cgatttttcg ggcgagctgt
     7081 tcctgcactt gtgccttttt gaattctccg cacacggcgc aaccgacgat gcggacattt
     7141 ccatccgcct tttccgccca ctccgcgccc aaaggcgaca aatcgcggta cggcgcgcta
     7201 ccgacggttg cgaacgtgcc gttttccacc cacgcccact tgagccggct gttgccgccg
     7261 tccaacagca gaaaacgttc cgaatcccgc cgcttcggca cggaaaccgg cctgtcgtcg
     7321 gaccgcaggc tgatttcgcc gctgacgacc gtctgtttgc cctctgccgt ttccaagtgc
     7381 aaaacgcctt gtccgtccac gcctttaacc gtgccttcga acacggtttc gccgtcgcgc
     7441 aacagcaata ccgccttgcc gtggtcgcgg ttggcagcct gatattccgc cacaaaaggc
     7501 gcaaatccgt cccgcgcata ttgcaacaac accgcatcaa gttccgccaa cagcgtttcc
     7561 agcaacacgg cggcatcggc attgccccgc cgcgatgccg tctgaaacag cgattgcacg
     7621 gaagcggcat tttctacttc cttgggcagg acaaaattga tgccgatacc gaccacggca
     7681 accgttttgc cgcccgtcct gaccgtttca atcagaatgc cgcccaattt gtcgcgtccg
     7741 acaaccaaat cattgggcca cttaatctgc acatccaaac ctaaacgcga caaggcgcgc
     7801 cgacacgcca ctgccgcaac aggcgacagc gaacccaact catactgcgg ccggtcaaac
     7861 acccagccaa aactgaacat cagacactcg cccaaacggt gcgaccactt ccgcccctgc
     7921 cgccccctgc ccttactttg caggtgggtc acacatatgg ttttgtgcgc cttgtccggc
     7981 gcaatccgcg ccaattccag tatctcgtcg ttgctggacg cgcactcgtg cttcaatgcc
     8041 gtctgaaaac ccgacctttc ccccagctcg cgcaaacctt cggcatcgaa aaccgccaat
     8101 gggcgcacca gccgccaata gccgtcgtgt tggcgcaaca gcccgcgtat gtgcgccggc
     8161 atctgctgcc aaaaaccgtt gagctgctgc ggcttcatat ccgccatacg cgccagttgc
     8221 gagacgtgtt gcggcaaacc gtcggcaagc tccgccaaca cccgccagtg cgaaagcttc
     8281 aaaaccgtca ttttccgccc tctgccgcac ggatttttgc caaagtcttc gttgtcgaag
     8341 tctggtgcag aaacggaatt gaaaacacct gaccgccgcg cgccaacgtt tctgccgcac
     8401 cgacaatctt atccgcagcc caatcgccgc ccttgaccaa aatctcaggt ttgaccgcct
     8461 caatcaacgc cgccggcgta tccccgtcaa accacgttac caaatccaca ctttccaaag
     8521 cggcggcaac ggcggcacgg ttctccaaag gattaatcgg gcggtcgccg tccttgccca
     8581 aacgccgcac cgaagcatcg gtattcaacg ccagcaccaa cgccgcccct gccgaacgcg
     8641 cctgcgccag ataagtaacg tgccccctgt ggaggatgtc gaaacagccg ttggtaaaca
     8701 ccagcgggcg cggcaaccga gccaaccgtt cggacaatgc ctcgggcgga cagattttcg
     8761 attcaaaatc agggacagac caagcgtcaa ccatcaaagc ctccgacaaa aaccataaaa
     8821 gacagaaaaa cccacatgat acagaagcat atgcgaaagg caaagccggc ggcgcggaca
     8881 gtacgcgcaa acgggaaaag acccgtaccg aaaagtacgg gcctttatct ggggtggctg
     8941 atggggctcg aacccacgac aaccggaatc acaatccggg gctctaccaa ctgagctaca
     9001 gccaccataa aaacggtttt caatcaaatt cttggcacgc ccgacaggaa tcgaacctgt
     9061 aacccccgac ttagaaggtc ggtgctctat ccggttgagc tacgggcgct catgccgatt
     9121 cgtgctgatt gattggtcgg ggcggtggga ttcgaactca cgaccctctg ctcccaaagc
     9181 agatgcgcta accgggctgc gctacgcccc gacttgaaga agcgaactat acaactcagg
     9241 gaaagatgcg tcaacattta ttttcaagac accaagatga aaaatatagt tttttgattt
     9301 gaaaaaatat ttaatccgtc caaacagccg tattttattt cagggcaaat ttattttcgg
     9361 catcctgctg taaaaacaaa cggaaaatgc gataattttc agcattttct acctgtttaa
     9421 caaaaggacg gatatgtcgg cacaactgat caatggtaaa gaagtttcgc aaaaacgcct
     9481 gcaggcggtt gccgaagcgg tggcgcaacg ccaacaggac aatctgcaca tgccttgcct
     9541 ggccgtggtt ttggtcggag gcgaccctgc cagcgcggtt tatgtccgca acaagaaaac
     9601 tgcctgccaa aaatgcggca tcaaatcact gtcttacgag ctgcccgaat caacatcgca
     9661 ggaagaactg ctggcactgg tcgaccgcct gaatgccgat tccgaagtgg acggtattct
     9721 ggttcagcta ccgctgccga agcacctcga cagccaggcg gttttggaac gtatttcgcc
     9781 ggataaggac gtggacggct tccatcctta caatgtcggc aggctggcgg tcaaaatgcc
     9841 gctgatgcgc ccgtgtacgc ccaagggcgt gatgacgctt ttggaagctt acggcattga
     9901 tccgaagggg aaaaaagcgg tcgtggtcgg cgcgtcgaat atcgtcggcc gcccgcaggc
     9961 tttggaactg ctgctggcgc gcgcaacggt aacggtctgc cacagcgcaa ccgaaaatct
    10021 gacagacgag gttgccggag ccgatatttt ggtggtcggc gtaggcattc cgaactttgt
    10081 caaaggcgaa tggatcaaac ccggcgcggt cgttatcgat gtgggcatca accgtttgga
    10141 cgacggcagc ctgtgcggcg acgtggaatt tgaaacggca aaagaacggg cggcgatgat
    10201 tacgcccgtt cccggcggcg tgggtccgat gacgattgcc acattgatgg aaaacaccct
    10261 gcacgcggct tcactgcacg atgcttgagc ggttctgaag ataaaaatgc cgtctgaaag
    10321 gctttcagac ggcattttgc cgtgtccgtt tatttgggca gcttgacgac aaccgtatcc
    10381 gccagtatgt cgtaaagcgt gcggcggtcg cgtttgacca taaagagcag gacaaagttg
    10441 gcaaggaatg ccagcaggtt gatggcgttt tctccgttgt cacctactgc aagaccgata
    10501 acggcggcaa taatggcaac caaaaccgac catgcgattt cgcgtaccaa aaccgtgccg
    10561 acaaaacccg gattgcggcc gtcggttttc aacaccctga ttctcatgat cttcttaccc
    10621 aatgactgcc cgtcccgact catatagtag atttgaacga cggtataaac caaaatgccc
    10681 gccagtccta cccaaaagga agtcatgccc aaaagcagcc cgaatatttc ctcactgccg
    10741 ccaatcctgc cttcattctt gatggcgaaa gcaatcagtc cggcaaacgg caccaacaaa
    10801 accaaaaagg taaacaattg gttcagcagc gcggcaagta tccggtcgcc tgcgccggca
    10861 attccgactt caatttcctg cccgttgcgg ttgtcggatg ccgcgtcggt gtagtcgttt
    10921 ttttcttcca tatccgttcc tgataattgt tcttaactga ccccgattct accgccacga
    10981 caccgaaaac gccaatactt aaagaaatcc cgataaagaa ctttacattt tcccaatacg
    11041 gcgttaaaac gcttccttta cgccatacat aattttgtta acgatttttt cctcaaggag
    11101 caacacaatg aaagtaggtt tcgtcggctg gcgcggcatg gtcggttcgg ttttgatgca
    11161 gcgtatgcaa gaagaaaacg acttcgccca cattcccgaa gcgtttttct ttaccacttc
    11221 caacgtcggc ggcgcagccc ctgatttcgg tcaggcggct aaaacattat tggacgcgaa
    11281 caacgttgcc gaactggcaa aaatggacat catcgttacc tgccaaggcg gcgattacac
    11341 caaatccgtc ttccaagccc tgcgcgacag cggctggaac ggttactgga ttgacgcggc
    11401 atcctcgctg cgtatgaaag acgacgcgat tatcgtcctc gaccccgtca accgcaacgt
    11461 catcgacaac ggtttgaaaa acggcgtgaa aaactacatc ggcggcaact gcaccgtctc
    11521 cctgatgttg atggctttgg gcggcctgtt ccaaaacgat ttggtcgaat gggcgaccag
    11581 tatgacctat caggccgctt ccggcgcggg cgcgaaaaat atgcgcgaac tcatcagcgg
    11641 tatgggcgcg gttcacgccc aagtggcgga cgagcttgcc gatcctgccg gctcgattct
    11701 cgacatcgac cgcaaagtat ccgatttcct gcgcagcgaa gactatccga aaaccaactt
    11761 cggcgtaccg ctcgccggca gcctgattcc gtggattgac gtggatttgg gcaacggcca
    11821 gtccaaagaa gaatggaaag gcggcgtgga aaccaacaaa atcctcggcc gcagcgacaa
    11881 tccaaccgtg attgacggcc tgtgcgtccg cgtcggcgcg atgcgctgcc acagccaagc
    11941 catcactctg aagttgaaaa aagacctgcc tgtttccgaa atcgaaacga ttttggcagg
    12001 cgcgaatgac tgggtgaaag tcatccccaa tgaaaaagaa gccagcatcc acgagctgac
    12061 tcctgccaaa gttaccggca cgctgtccgt ccctgtcgga cgcatccgca aactggagat
    12121 gggtggcgaa tacatcagcg cgttcactgt cggcgaccag ctcttgtggg gcgcggccga
    12181 gccgctgcgc cgcgtgctgc gtatcgtgtt gggcagcctg taagccctgt ttgaatggaa
    12241 atgccgtctg aagcctgttt cagacggcat tttccttgca accccagtta accgaaattc
    12301 cgataaggca agcgttcacg ccagcaacat ttcctgcatc agcttcatac cccactgcca
    12361 gccgccgagc ataccgttca aactgcccga atgcggggaa accaacaggc gggcgttcca
    12421 caaatccgcc tgtctttgcg cccaaccgtg cggcacgccg ccgtgttcgg gtacaaccaa
    12481 tgcggcacgg cagggacagc ggacgcgttg gaaagcgtgt tccgcatcgt cgggaaaaat
    12541 atcgggacgc tgcggtacaa ggatgatgtt ggcaattttc ttccgtgtca ggatgtctgc
    12601 ctgatacagc cacgccaaaa atgcggccgc gcccgcaccg tgtgcgacaa cggcgacgta
    12661 tttgccgcgt atgcgttcaa atgccgtctg aagccctgcc tgccattccc ctatgctttg
    12721 accggccgac gcttcggaca tctgcacgac gggataactg atcgcccagc ggtctatcca
    12781 catttccgct tcatccgcat cgcgtaccag ccacagcgtc aaatcctcaa gctcgaaact
    12841 ttccattgtc cgcgcctatt tgagcaggtc ttgcagcgtg aacgcaatca gcagcgtggc
    12901 aggcacactc aacagggtgc gcacggcgag gcaggcaaga acgtttgcca acagccgcca
    12961 gcctttccaa cccaaacatt tggacgcaat cagcaggcag ggcaggcaaa tcagcagcca
    13021 caccaacgcc catatcgggt ttgccttggt cggcgcaagc cagccttgca tccgcgacaa
    13081 cataaatatc gcccacacca atatgggcag gataaacgca gcgacaaccc atgccgcgcc
    13141 tattcctgtt tttccgtcca cattccaatc atatttaccc aaaactttat tcggcagcat
    13201 agtcatactc cacgaccagc ggcgcatggt cggaaaattt ttcatcttta taaacgtgtg
    13261 cggacacggc tttggcggca agttcgggcg taaccatctg ataatcgatg cgccacccga
    13321 catctttcgc atacgcctgc cctcggttgc tccaccaagt gtagcccggc acatcgggat
    13381 aaagcgtgcg ccacatatcc gtccaaccga gcttgtggat aaccttgcct atccactcgc
    13441 gctcttcagg caggaaacct gaatttttct ggttgccttt ccagtttttc aggtcgatgt
    13501 tttggtgggc gatgttccag tcaccgcaaa cgacaatgtc gcgcccttcg tttttcatcg
    13561 cttcgagcat agggtaaaac gcatcgagga aacggtattt cacctgctgg cgttcttccg
    13621 cgctgctgcc gctgggcaag taaagcgaaa taacgctcaa cctgccgaaa tcgcaacgca
    13681 caaaccgccc ttcgcggtcg aattcttcaa tgcccatacc gatttgcaca ttgtcgggtt
    13741 tgcgtttgct gtacaccgcc acgccgctgt aaccgcgctt ctcggcacaa tgccaatggc
    13801 cgtgcatccc gtgcggattt ttcatatcgg cagacaaatc agcctcctgc gctttgagtt
    13861 cctgcacgca gacaatgtcc gcgcccgatg cggcgatgta ttcgtaaaaa ccttttttgt
    13921 aggcggagcg gatgccgttg acgttggcgg aaatgatttt aagcataata aaaataagtt
    13981 ctcacaatgt tcccatacac aaaacggcac ctggtgcgcc gcccggcatt tcccattcaa
    14041 ccctgcctgc tgaaaacggc ggggcttcaa gcgggaaatg ccgtctgaaa acggaaaaag
    14101 agcaaaaggc ggtacttttg ccctttccga tacagttcaa ccgcgccgcc aagtcgtgcc
    14161 gccggcgttg tcttccaaaa tgattttgtg ttcgttcaga aggtcgcgga tgcggtcgga
    14221 ttccgcccag tttttatcgg cgcgcgcctg tttccgccgg gcgatcaagt cttcgatttc
    14281 ttcgttggag aggccgtctg aagccgcgct gccttgcagg aactcggtcg ggtcgcgttg
    14341 cagcaggccg atgatgccgc ccaaggcttt caggcagccg gcgagctgtg cgtcattggt
    14401 tttgttcact tcgcctgcca gttcgaacaa cacggcaacc gcttcgaccg taccgaaatc
    14461 gtcgttcatg gcggcgtaga agcggcgggt gtagccgttg gcgttttcgg ataaatcaaa
    14521 ctcagccgcc ggcgtgtttt tcaaggtggt gtacagacgg gtcagcgcac cttttgcatc
    14581 gtccaaatgc gcgtcggaat agttcaacgg gctgcggtag tgggcgcgca ggatgaagaa
    14641 gcgcacgact tcggggtcgt attgtttcaa cacttcgcgg atggtgaaga agttgcccag
    14701 tgatttggac attttttcgc cgtccacgcg gataaagccg ttgtgcagcc aatatttgac
    14761 gtggctggcg atgctttgcc cgtggtgggt ttgcgcgtga tgatgaccgc aggtatgccc
    14821 cgtcgcgccg acgctttggg cgatttcatt ttcatgatga gggaactgca aatccgcgcc
    14881 gccgccgtgg atgtcgaagg tatcgccgaa caggttttca ctcatggcag agcattcaat
    14941 gtgccaaccc ggacggccgt tgccccacgg gctttcccac gccggttcgc ctgctttcgc
    15001 cgctttccac aatacaaaat caagcggatc gcgtttgaaa ccgtccactt ccacgcgttc
    15061 gcccgcgcgc aggtcgtcca acgatttgcc cgacagttgt ccgtaagcgg caaactcgcg
    15121 cacggcgtag taaacgtcgc catttgcggc aggatatgcc ttgccgtttt gaatcagggt
    15181 ttcaatcatg gcaatcattt gcggaatgtt ttccgttgcc ttcggctcaa tatccggacg
    15241 caacacgccc aaagcatcgg catcttcgtg catagcctga atgaaacgcg cggtcagttc
    15301 gccgatagtc tcgccgtttt cagccgcacg ggcaatgatt ttatcgtcga tgtcggtgat
    15361 gttgcgtaca taagtgagcg gatagccgca ctcgcgcaac cagcgggcaa tcatgtcaaa
    15421 caccaccatc acacgggcat ggcctaagtg gcaatagtcg taaacggtca tgccgcaaac
    15481 gtacatacgc acgtttttcg gatcgatggg ggcgaagagt tctttttgac gggtaagggt
    15541 gttgtagatg gtggtcatgg gattatggat taatctttgt tgctcggatg ataatttctg
    15601 ttctgttcct gtagatacgg accaaggaac attacgcagt tgcggattat taatatggct
    15661 gatatttgtg aaaattggtt ctgcataaca gtttgcaaaa ttttttgtaa attctgataa
    15721 tttaaactta tcttttaata agtttgctaa atctgatgac gagggataaa gtttacttct
    15781 tatactaggc atttcaatat gaaggactat ttttatttcg ttacaatcta aagccaagcg
    15841 agaaaaatct ttttcttcct gtttttctgc tttaaattta gcagaaacca atcctgccaa
    15901 tgaatctcga atttttcttg cgattaaata tggtaggtca gaaagttttt catctattga
    15961 ttgggcattt ggctcaagcc caagtcggta ataatcttta atttcgatta gccaaagtgt
    16021 cgattcatga agggctatta tatctacacc tgagctgcca ttatcgtcat ctacactttg
    16081 atttatcccg ttctttccct tttcatttgt atcaatttta ttacgtaaat tacaactgtt
    16141 ctgaaaaatt ttataatgtt cccattcgtc atacttggta acgtaataat cttcaggaaa
    16201 agcaaaggtt aatctctttt ctgtgattgt agtcatagct tagcctcaaa tattcaaata
    16261 cctgtctgcc tgcataatgt tttcatctaa caatatcaat gtgttcaaat cattaatact
    16321 gttcccttgc tccacttttg ttccatcatc ggaagcaatc aacgagaaaa aacgtacagg
    16381 taaatccgtg ttattttcaa gcttcaaaag ttccaattct ctcaataaga ataaagagtg
    16441 tgttgcaata aaaacctgaa taccctgttg agataaagac caaataatac gggcagccac
    16501 tttgatcaat ttaggattca gattagcttc cggttcatcc caaaatagat agcctttatc
    16561 cagcaatgcc cctgttgcga ttaaccgggc aatcatgaca aatttccgca aaccctctgc
    16621 taccaaaggt gcttcaatct taccgcccgt atttgtcagc gatagataaa accttccttg
    16681 ttcttcagat acttttccgc ccatcgcgtt ctcaataggt tcgagcaatt ctcgaatttt
    16741 tgtttctctg gggcctttgg caagcgggtg atttaattgc atacaggtat caaaccaagt
    16801 ttcttcgaaa gggatgcttt ggttttgata caaagaagtg aaccaagggc aaagtgtaat
    16861 taattcgcgg ctgggtaaga agataggtgt cggagtatat tcattttctt tcaatccgat
    16921 gctttgaaca ttgacttgcg atgatgagtt actggaaaaa ttcagactac tatgcgtagt
    16981 gccgttttgc agttttaaaa cgatttccgt acgcccgcgc ccctgcaaac gtttgctcaa
    17041 cctgcccaag gaatcgggac ggaaaacatt cagtaattta tcggcaaaac ttttttgcaa
    17101 ttctgttttc agtaatctgt ttttggtgtt agatgttact tctagcaggc tgtataaaat
    17161 ttttaacaaa tgtgttttgc cacaaccgtt ttcggcaaca ataacattga gattttcaga
    17221 aaattcaaaa gtatcgtttg gaagaacggt aaagtttgtc aactcaagcg actggatata
    17281 ttggttagat gacattttta atccatttca atcttgcttt aaaattgttt caaacaacct
    17341 tttgtagaac aaatatcgtc tgaaaccctt tcttttttca ctccggctta aacacgcccg
    17401 tatccgtttt aggctgctgt tcgataattt caacatttgc cgctgctttc tccgcttcgg
    17461 ctttttcagc ttcgatacgt tttttctcgg tcaggtattg gttgatttgg tgtaccaatt
    17521 cctgcgtgcc ttggtgggtc agcgcgctga tttggaagag gcgcggggtt tccatgtcaa
    17581 attggaaacg gtcgtcgggt ttggggtagt cccagccgac ggcttcgagg aaggcggcag
    17641 tgcgcgtttg ggcttcttct tcgtcaagca tgtcgagttt attcagcacc agccagcgcg
    17701 gtttgccgta aagttcttca tcgtatttgc gcaattcgtt gatgatagca agtgcttctt
    17761 cggccgggtt gacggtttcg tcgaagggcg ccaaatcgac gacgtgcagc aataatccgg
    17821 tgcgcgataa gtgtttgagg aaacgatgcc ccaaacccgc gccttctgcc gcgccttcaa
    17881 tcaggccggg gatgtcggcc atcacgaagc tgtggttttc gtcgatgcgt accacgccta
    17941 agtttggatg cagggtggtg aaggggtagt tggcgatttt ggggcgtgcg gcggatacgg
    18001 cggtaatcag ggtggatttg ccggcgttgg gcatacccaa taagccgaca tcggcgagga
    18061 ctttgagttc gagttgcagg gaacgggctt cgccttcttc gccgggcgtg gattgttttg
    18121 gggcgcggtt gacggaggat ttgaagtgga tgttgcccaa gccgcctttg ccgcctttgg
    18181 caaggcagac gcgctgtccg tgataagtga ggtcggcaac gttttcgccg gtgtcgaggt
    18241 cgcggataag ggtgccgacg ggcattttga ggacgatgtc gtccgcacct gcgccgtaac
    18301 ggtcggaacc gtggcctttt tcgccgtttt tggcttggta gcgtttaacg aagcggtatt
    18361 cgacgagggt gttggtgttt tcgtcggctt ctgcccaaac gctgccgcct ttgccgccgt
    18421 cgccgccgtc cggaccgccg cgcggtacga atttttcgcg gcggaaactg gttgcgccat
    18481 taccgccttt gcctgcggcg acttcgattt ttgcttcgtc gatgaatttc attcaatgct
    18541 cttgtttgtt ggtttcaaat gggggttcag acggattacc gtgtgttttg atgccgtctg
    18601 aacagaattt cggacgctat tataagggat aagcggtatt tcaacacgcc gtacccaaac
    18661 tatttgttcc gcccatctta atgaattttt aagcaaatct tcagcctgca aacaaaatta
    18721 tgtccaactt ctttggtaca atcgcgcctt tttgacattc cgacccgacg gaatgtccgt
    18781 tcaaaccgtt acatataata agttttgggg ctgtcctaga taactaggat aaactcg
//
LOCUS       DBBZYD010000034        18728 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.034, whole genome shotgun sequence.
ACCESSION   DBBZYD010000034 DBBZYD010000000
VERSION     DBBZYD010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18728
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.034"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(105..1892)
                     /gene="lpdA"
                     /locus_tag="ACJJDL_000974"
     CDS             complement(105..1892)
                     /gene="lpdA"
                     /locus_tag="ACJJDL_000974"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7573702.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAPAAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAK
                     SRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAATTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1969..3552)
                     /gene="aceF"
                     /locus_tag="ACJJDL_000975"
     CDS             complement(1969..3552)
                     /gene="aceF"
                     /locus_tag="ACJJDL_000975"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HGG7573703.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAASAAAAPVAAGGATVQV
                     AVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAVFLKVG
                     DKVSEGSAIIEVETVGSAAAAPAQAAQAAAPAAAPPPTAAAAPAAAPAPSAPAAAKID
                     EAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGAAKPAA
                     AGASLGSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEAD
                     MTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFN
                     IGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACFTISSL
                     GGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAG
                     MRFTVFLAKLLKDFRRITL"
     gene            complement(3702..6365)
                     /gene="aceE"
                     /locus_tag="ACJJDL_000976"
     CDS             complement(3702..6365)
                     /gene="aceE"
                     /locus_tag="ACJJDL_000976"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HGG7573704.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSDFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVVT
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALSA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7059..8771
                     /locus_tag="ACJJDL_000977"
     CDS             7059..8771
                     /locus_tag="ACJJDL_000977"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HGG7573705.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDSYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVRSPLTMASPAAIVEQFGANGG
                     SLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVVRVTA
                     LLNG"
     gene            8834..9490
                     /locus_tag="ACJJDL_000978"
     CDS             8834..9490
                     /locus_tag="ACJJDL_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HGG7573706.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGTGEGKDILGCVAGYGVGLDLTA
                     RDIQCRLKEKGLPWLKAKGFRHSACVSDFAAAGRIGNPENVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9500..9955)
                     /gene="ruvX"
                     /locus_tag="ACJJDL_000979"
     CDS             complement(9500..9955)
                     /gene="ruvX"
                     /locus_tag="ACJJDL_000979"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HGG7573707.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(9948..10496)
                     /locus_tag="ACJJDL_000980"
     CDS             complement(9948..10496)
                     /locus_tag="ACJJDL_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HGG7573708.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10498..11058)
                     /locus_tag="ACJJDL_000981"
     CDS             complement(10498..11058)
                     /locus_tag="ACJJDL_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HGG7573709.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11386..13176
                     /locus_tag="ACJJDL_000982"
     CDS             11386..13176
                     /locus_tag="ACJJDL_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG7573710.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKSVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKAQI
                     SRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKALAV
                     QEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLEQKGNE
                     QQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEMSNL
                     TAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYSTA
                     PATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIG
                     SSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13303..14787
                     /locus_tag="ACJJDL_000983"
     CDS             13303..14787
                     /locus_tag="ACJJDL_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HGG7573711.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLINSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
     gene            15116..17143
                     /gene="uvrB"
                     /locus_tag="ACJJDL_000984"
     CDS             15116..17143
                     /gene="uvrB"
                     /locus_tag="ACJJDL_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HGG7573712.1"
                     /translation="MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIAQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVMRDRIRNIKESLLFGAE"
     gene            17189..18457
                     /locus_tag="ACJJDL_000985"
     CDS             17189..18457
                     /locus_tag="ACJJDL_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT domain-containing protein"
                     /protein_id="HGG7573713.1"
                     /translation="MKLSKTRIDKSGLALAKQQYKDEIDFIELEECFDLYRQSHLSPL
                     SKTTIDIQNILREYIGEYYIAQRLKRKPQIIRKLNRLSVRLTQLQDIGGCRIIVPTNR
                     DVDKIYKFLSSKKDNLDFLIKKVTDYREKGRDDSGYRALHIIIERENLNFELQIRSRI
                     QHYWAESIEKTSVVYGYYLKEQEGDRDVINYFKELSDVFYEIESGRKPTTIQKLNLED
                     LRKRCEVIIQKSDTHKILNSYVNEGIISALIEKEKRNTNSLNNWILIFDWNAGVFVSW
                     DVVAQDPKQAVEVYVNYENQYPSLEGFEVVLIGSSDIASVQKTHSHYFGIASYENILE
                     TLDESIFCFAKKDDIDIGARRILAAMVRHKFWGTKTVTSETLKNHFCQNLFGFDYSLR
                     DLIRKELIKYGRDKDLSLNIAKKMEIESYL"
BASE COUNT         4745 a         4598 c         5010 g         4375 t
ORIGIN      
        1 gtcggagaag atattttaat ccgctgtaaa atagaaaatg ccgtctgaac atttcagacg
       61 gcatttgctc aaataaacct tatcggctgt ttattcagtc ggatttattt tttcttttgc
      121 ggaggcaggt cggtacaagt acccaatgcc acttccgccg ccataccgat ggattcgccc
      181 aaggtcgggt gcgggtggat ggttttgccg atgtctgccg cgtcgcagcc catttcgatg
      241 gcaaggcaga cttcgccgat catgtcgcca ccgttcggac cgacaatgcc gccgccgatg
      301 atgcggccgg tttcggcatc aaaaatcagc ttggtaaagc cgttgtcgca accgttggca
      361 atcgcacggc cggaagccgc ccacgggaag ttggctttgg tgattttgcg gccggatgct
      421 ttggcggaca actcggtttc gcccacccac gccacttcgg gggaagtgta ggcaacgccc
      481 ggaatcacgc gcgcgtcgaa gtaggctttg tggccggcgc agttttcagc agcaacgtgg
      541 ccttcgtgaa cggctttgtg tgccaacatt ggttgaccga cgatgtcgcc gatggcgtag
      601 atgtgcggca cattggtacg catttgtttg tccacttcga tgaagccgcg atcggtaacg
      661 gcaacgcctg ctttttccgc gctgatgagt ttgccgttgg gcgcgcggcc ggcggcaacc
      721 aatacggcat cgtaacgttg cggctcttta ggcgcatttg caccttcaaa ggtaacgtaa
      781 acgccgtctt ctttcggctc gactgcaacg gttttggtgt tgaccataat gttgtcaaaa
      841 cggtattcgt tttgtttttg ccatactttc accaagtcgc ggtctgcgcc ttgcatcagg
      901 ccgtccatca tttcaaccac atccaaacgc gaacccagcg tgctgtaaac cgtacccatc
      961 tcgaggccga taatgccgcc gccgataatc agcagtttgc ccggtacttc tttcagagcc
     1021 aatgcgccgc tggaatcgat gatgcgcgga tcttcaggaa tgaaaggcag tttggttacg
     1081 cggctgcctg ctgcaatgat acagtttttg aaggcaacga tttttttctc gccggtagtg
     1141 gctgcctgtt cgtacgcgtc gccggcagtc agcgacactt ccaagtggtg cgggtctaag
     1201 aattgcccgt cgccttggat aacgtccact ttacggcttt tcgccatacc tgccaaaccg
     1261 cccgtgaggc gggaaactac gccgtctttg taggcgcgaa gcatatcgat gtcgagttcc
     1321 ggctcggggt atttgatacc gttggcagcc aagtggcgca cttcgtcgat aacggcggca
     1381 ttgtgcaaca aggctttgga agggatacag ccgacgttca ggcaaacgcc gcccaaagtt
     1441 ttgtaacgtt cgacgatggc gactttcaag ccttcatcgg cagcggcaaa tgcagcggag
     1501 taaccgccgg gaccgccacc caatacgacc acgtcgtact cggcatcggc agaaccgccg
     1561 aattgcgcgg cttgcggagc aggagcagca gctttagggg cttcttgcgc cggggcggca
     1621 gcaggtgctt cagctttggg agcggctgcc gtgccttcag cttcaacgac gacaatcaag
     1681 ccgccttcgg agattttgtc gccgactttg actttcactt ctttgaccac gcccgcaact
     1741 tcggcaggca cgtccatcgt cgctttgtcg gtttccaggg taatcagggt atcgtcaacg
     1801 gcgatggtgt ctcctacgtt cacttcaact gcgataatat ctacattttc gtgtccgcca
     1861 atgtcgggca ctttcaattc aactaagctc atgtctcatc tttctgaatg atgttcaaac
     1921 ttccttttca gacggcacag gccgctatgc cgtctgaagc cgatcgggtt acagggtaat
     1981 gcggcggaag tctttcaaca gcttcgccaa gaatacggta aagcgcatac cggccgcacc
     2041 gtcgatgacg cggtggtcga aagacaggct caacgggcac atcaggcgtg gggcaaattc
     2101 tttgccgttc caaaccggtt tgatttggga tttgcacacg cccaagatgg cgacttcggg
     2161 agcgttcaca atcggcgtga aacctgtgcc gccgataccg cccaagctgg aaatggtaaa
     2221 gcacgcgcct tgcatttctt gcggtttgag cttgccttcg cgggcttttt tagacaattc
     2281 ggtcagctct tggctgattt gtttcaagcc tttttgatcc acgtctttga tgacgggaac
     2341 aaccaagccg ttcggcgtat cggctgcgaa accgatgttg aagtagtttt tcagcaccag
     2401 gttgtcgccg tccagagaag cgttgaattc ggggaaggct ttcagcgcgg aaacggaggc
     2461 tttgatgatg aacgctagag gagacagttt cacgccttcg cgttcccatt ctttgttcag
     2521 ttgtttgcgg aattcttcca gctcggtcat atctgcttct tcgtgtacgg taacgtgggg
     2581 aatcaccacc cagttgcgag acaggttttg accggagatt ttcttaatgc gggacaattc
     2641 tttaacttcg acattgccga atttggagaa gtccacttta ggccacggca gcaagtccag
     2701 accgctgccc aaagatgcgc cggctgcggc aggttttgcc gcgccaccct gcattacgga
     2761 tttcacaaag gctttgatgt cgtcgcccac gatgcggcct ttcaagccgg tacctttgac
     2821 ttggcccaaa tccacgccca attcgcgcgc cagtttgcgt gcggaaggac cggcgtgtgc
     2881 tttggcgaaa gcggcctcgt cgattttggc agcggcaggt gcagaaggtg caggcgcggc
     2941 ggcgggtgcg gcggcagcag tcggaggcgg agcggcagcc ggtgcggcag cttgagcggc
     3001 ttgagcaggg gctgctgcgg cagagccgac ggtttctact tcgataatgg cagagccttc
     3061 ggacactttg tcgccgactt ttaagaatac ggctttaacg acaccggcag cggtacaagg
     3121 tacgtccatt gtcgctttat cggtttccaa agtaatcagc gtgtcgtctt cggcaacggt
     3181 gtcgcccact ttgatttcaa cggcgattac atccacatcg gtatggccgc cgatatcggg
     3241 aacggctact tgaacggttg caccgcctgc ggcaacgggt gcggcagcag ccgaggcggc
     3301 ttcggcagcg gcggcaccgg tttcaacggt caaaattacg ccgccttcgg agattttgtc
     3361 gccgactttg acttttactt ctttcacgac accggcagca tcggcaggca catccatcgt
     3421 ggctttgtcg gtttccagtg taatcagggt gtcgtcaacg gcgatggtgt cgcccgcttt
     3481 aacttctacg gcgatgatgt cgacgttttc gtgaccgccg atatcgggga ctttgatttc
     3541 tacgatactc atttgagttc ctttaatctt gttcagttgg atgccgtctg aaagctgctt
     3601 caggcggcat cggtacggtt tgtctgctca aaccattcgg gcattcggtt ttcagacggc
     3661 ctgatgtcgg aatggggcaa acagaccgtc tgaaacatca atcagcgttt ccagctagga
     3721 gctgaatcgg ctttgatgcc gtatttctca atggcttgtt gaacggtttc tttgctgact
     3781 ttgccttgtt ccgccaatgc gctcaatgct gccacggcaa cgttgtagcg atccacttca
     3841 aagaagcggc gcaggttggc gcggctgtcg gagcggccga agccgtcagt acccaagacg
     3901 tggtagtcgt tcgggatgta ggcgcggata cggtcagcat agctgcggat atagtcggta
     3961 gcggcaataa ccggaccgtc atgaccttgc aatttggaag taacgaaagg tactttttcg
     4021 gcttccagcg gatgcaggcg gttgaagcgt tctacctcga cagcgtcgcg gtgcagcagg
     4081 ttgaaggatg ggcaagacca aatgtctgct tccacgccga agtcggcttt cagcagctcg
     4141 gcaccggtaa ccacttcttg caaaatcgta ccggaaccca tcagttggac tttcttgtcg
     4201 cctttgccgc cggctttcag caggtacata cctttcaaga tgtcttgttc cgcaccttcg
     4261 ggcatatccg gatgggtgta gttctcgttc atcagggtga tgtagtagaa cacgtcttca
     4321 ttattggcat acatacggcg cagaccgtct tgtacgatga cggcgacttc gtattggaaa
     4381 gtcgggtcat aagatacgca gttcggaatc aggtcggcct ggatgtggct gtggccgtct
     4441 tcgtgttgca ggccttcgcc gttcagcgtc gtacggccgg cagtaccgcc cagcaggaag
     4501 ccgcgcgcgt gcatatcgcc cgccgcccaa gccaagtcgc cgatacgttg gaaaccgaac
     4561 atagaatagt aaatgtagaa cggaatcatc gcgaagtcgc tgttggcgta gctggttgca
     4621 gccgcaatcc agtcggccat cgcgcccggt tcgttaatac cttcttgcaa gatttgaccg
     4681 tcaacggatt ctttatagaa catcagttgg tctttgtctt gaggggtata ttgctgacct
     4741 ttcggattcc aaataccgta ttggcggaac ataccttcca tgccgaaagt acggctttcg
     4801 tcgggaacga taggtacgac gcgtttgccg atttttttgt ctttcagcaa agtggacagg
     4861 atgcggacga atgccatcgt ggtcgagaac tcgcgttcac cgctggattt gagttgtgcg
     4921 tcgaatgctg acagctcggg cacttccaat acttcctgcg tcggtttgcg ttgcggcagg
     4981 tagccgccca aagcatcgcg gcgtgcgtgc aggtatttgt attcttccgt atcgggggca
     5041 aaagtcaggt aaggcagatc gccgctttcg atttgttcgt cggtaaccgg aatgtcaaag
     5101 cggtcgcgga attgtttcag ggacgctttg tccatttttt tggcttggtg ggcaacgttc
     5161 tgaccttcgc cggatgcgcc cataccgtaa cctttaatgg ttttcgccaa gatgacggta
     5221 ggtttgccgt cggcatggtt cgctgcgcgg tcgtaggcgt tgtacacttt ttgcgggtcg
     5281 tggccgccgc ggttcaatgc ccagagttgc tcatcggtca tatcggcaac caatgctttc
     5341 agttcgggcg tattgaagaa gtgttcgcgc acatacgcgc cgtctttgga tttgtaagtt
     5401 tggtagtcgc cgtccaaaca ttcttccata cgttggcgca ggataccgtc tttgtctttc
     5461 gccaagaggc ggtcccagcg gcggccccaa atgactttga cgacattcca gccggcgccg
     5521 gcaaagttgc cttccaattc ttggatgatt ttgccgttgc cgcgtaccgg accgtccaag
     5581 cgttgcagat tgcagttgat gacgaaaatc aggttgtcca agccttcgcg tgcagccagt
     5641 gcgattgcac cttgagattc gggttcgtcc atttcgccgt cgccgcagaa acaccatact
     5701 ttacggcctt tggtttttgc caaaccacgc gattccaagt atttcaggaa acgcgcctga
     5761 taaatcgcca tgatgggccc caagcccatg gatacggtcg ggaactgcca aaagtcgggc
     5821 aagaggtggg ggtgcggata ggaaggcaga ccgtgtccgt ccacttcttg gcggaagttg
     5881 ttcagctggt cttcggtcag acggccctcg acgaatgcgc gtgcatagat gcccggggcg
     5941 acgtgacctt ggaagaagac caaatcgcct tcttcgcctt cgcctttggc tttccaaaag
     6001 tggttgaaac cgacttcgta catggtggcg gcagattgga aagatgcgat gtgcccaccc
     6061 agttccaaat ctttcttgcc ggcgcgcaat acgatggcgg cggcgttcca gcgcacgaat
     6121 gcgcggatgc ggtgttcgat gttttggtcg cccggaatgc ctttttcgtt ttcaaccgaa
     6181 acggtattca aatacggtgt ggtcgtgccg tgtggcatac gtacgccctt gtcgcggcag
     6241 tatttgacca ggttttccaa gaggtattgc gcgcgttcgc cgccttcata ttcgaggacg
     6301 gagcttaacg cgtccagcca ctcttgggtt tcgatagggt caacatcgtg taattgggtg
     6361 gacatagtat ctatccttta tgttgagtgt ttaatcggca gggagggtgt agccaacccc
     6421 tttattttcg tttgtgaaaa ataataagca aaaacgaaaa tttctaaatc aaaccgaaaa
     6481 aaataattta agtttaatgt tttcaaaaaa ttataaaagt tttggaaaca agggaaaact
     6541 tgaaaaaaat gttcgatctg ctccacacga aatcctatca gcaatcgggt ctgctggcaa
     6601 ataaccatgc ctgtaaaagc aggttttata ctgaagttgg cgtttggtaa ggtcaagtct
     6661 ttttgatttc gaaatattct gtttgatttt ggcgatattt tttcggaatt gtggtatatc
     6721 gaatcattat gtctctgtcg gcaattttcc tattgtagaa aatctataca caagctttgt
     6781 ggataaccgt gttgataagc cacggcttgt gttaaaaaag tcttacgcaa caaatgtacg
     6841 cttattttga ttaaaaaata ggcacattta aatctataaa aatcatgtgc ttatgttcaa
     6901 tatgatgttt ctggtcatgt ttttgccgtc tgttatggga tttctcccgc gcttggggca
     6961 gggggtgaat tttggaggtt ggtgcaaaac ctgctttttt cgcgttacaa tctgcacccg
     7021 atttactttt gaatttgcct gtttggaaaa atacttttat gaaagccagc caattcttta
     7081 tctctacttt aaaagaagcc cctgccgaag ccgcgcttgc cagccacaag ctgatgattc
     7141 gcgccggtct gattaaagcc aacgcgtccg gcctttatac ttggatgccg atggggctgc
     7201 gcgtgttacg caaagtcgaa aacgtcgtgc gcgaggaaat ggcgcgcgcg ggcagcgtgg
     7261 agctgctgat gccggtggtg cagcctgccg agctgtggca ggaatccggc cgctgggaat
     7321 tttacggtaa agaactgctg cgcctgaaag accgccacga ccgcgatttc tgcatgggcc
     7381 cgacctgcga ggaagtcatc gccgacatcg tgcgcaaaga aatcaacagc tacaaacagc
     7441 tgccgaaaaa cttttaccac atccaaacca aattccgcga cgaagtgcgc ccgcgtttcg
     7501 gcgtgatgcg cgcgcgcgag ttcgtcatga aagacgctta ttccttccat gccgactacg
     7561 cctcgcttca gacgacctat gatgccatgt atgactctta ctgccgcatc ttcacccgtc
     7621 tgggcttggc attccgcccc gtcgccgcag acaccggcag catcggcggt acgggttcgc
     7681 acgagtttca agtgttggcg gaaagcggcg aagatgttat tgcgtacagc gacacttccg
     7741 attacgccgc caatatcgag ttggcaccga ccttgccgct taaaggcgaa cgcgccgctg
     7801 ctcaggctgt gttgaccaaa gtacatacac caaacgtcaa aaccattgag tctttggttg
     7861 aattcctgaa tattccggtt gaacaaaccc tcaaatccat cgtggtcgaa ggcgaaaacg
     7921 aaggcgaaat cgtcttatta ctgttgcgcg gcgaccatga gttcaacgac atcaaggcag
     7981 aaaaactcgc aggcgtgaga tcgccattga cgatggcaag tcctgccgcg attgtcgaac
     8041 agttcggcgc aaacggcggc tcgctgggtc cggtcggctt tgcaggtaaa gtttatgccg
     8101 atttcgccac tgaaaaaggc gcggactggg tcatcggtgc gaacgaagac ggctaccact
     8161 ataccggctt caacttcggg cgcgatgccg ccgagcctga attcgtcgat ttgcgtaatg
     8221 tggtcgaagg cgacgaaagc cccgacgggc aaggccgtct gaaactggcg cgcggcattg
     8281 aagtcggaca cgtcttccag ttgcgcgaca aatacaccca agccatgaac gtaagcttcc
     8341 ttgacaacaa cggcaaatcg caaattatgg aaatgggctg ctacggcatc ggcatcaccc
     8401 gcgtcgttgc cgccgccatc gagcagaata acgacgaaaa aggcatcatc tggaccaaag
     8461 caatggcgcc gtttgaagtc gttatcgtgc cgatgaacta caaaaaatca gacaccgtac
     8521 gcgaagccgc cgacaaaatc tatgccgaat tgctggcggc aggcgcggat gtgctgctgg
     8581 atgaccgcga cgaacgcgca ggcgtattgc tgaacgattc cgagctgttg ggtattccgc
     8641 accgcatcgt catcggcgac cgcgctttga aagaaggcaa tgtcgaatac gccgaacgcc
     8701 gcaacaacga agcgcaggca gttgcaatcg gagaaattgt tgtgcgtgta acagctttat
     8761 taaatgggta agcttggtca aatgccgtct gaaaataatt tcagacggca tttttatttg
     8821 gggagaaagt gaagtggctt cagtattttt agaaggagaa gcagtcgagg tcggcaatat
     8881 tttctgtatc ggcaggaact atgccgcaca tattgaagag ttaaaaaacg aaataccttc
     8941 cgaacctgtg gtgtttatga agccgtcagg cagcattttg aacagcggcg gtacaatctt
     9001 gctgcccgag tttagtaggg atgtgcagtt tgagtgcgaa ctcgtgctgc tggtcggtaa
     9061 ggattcagac ggcacgggcg agggtaaaga tattttggga tgtgtcgcag gatatggtgt
     9121 agggctggac cttacggcac gggatatcca atgccgtctg aaggaaaaag ggctgccctg
     9181 gctgaaggca aaagggttca ggcattccgc gtgcgtgtcg gattttgcgg cggcaggcag
     9241 aatcggcaat cccgagaatg tgttgttttc attaaaacaa aacggcgtat tgaaacagcg
     9301 cggggatacc ggtttgatga tttacccgat tcgggaaatt ttacacaaac tggcggcaga
     9361 ttacggtttg gggaaagggg atttggtgtt taccggaacg ccctccggcg tgggcgcaat
     9421 cggtgcgggg gacaatttgg cattggagct ggacggcttg gtgcgcgcct ctttcacggt
     9481 agggtgttaa ccgcgccgct taaccctcac gcccgttgaa acattccgcc ggaccgccct
     9541 cgaaaaaacc gtgcaagatg gcttgcgccg ccacttggtc gagcaccgat ttgcgttttt
     9601 tgccgaagac ctgtgcttcc gaaagcaggc tttcggcata gacggacgac agccgttcgt
     9661 caacccaata gacggggaga ttgaacctgc cgttcagcct gcgtccgaac ttgcgcgaca
     9721 ggtgcgtcat ttcatgtttc gtgccgtcgg tatgcacggg cagtccgacg acaaaataac
     9781 gcggctgcca ttcttgaacc agcttggcga ttgccgcgaa cttttcatcg ttgctgccgc
     9841 cggtaacggt gctcaaagga tgggatagcc ctaattccgc gtctccttgt gccacgccga
     9901 tacgcgcttc gccgaagtcg aatgccagtg ccgttccttt tggaatttta tgcatggccg
     9961 gctcccgaaa acagggcgag cgggtcgatg ccgagtttgg cgaatgcggc ggcgtaacgg
    10021 tgttcgtagg ggatgtcgaa caggatgtgt tcgtcggcgg gaacagtcag ccacgcattg
    10081 tcggcaagtt cgcgttcgag ctggcctttt ccccagcttg aatagcctat gctgatcaag
    10141 gctttgtcaa ccgcaccttc gcgtgaaata ttttcaatca cgtctcggga agaagttagc
    10201 gcgatattgt ctgaaacgcc gatactgctt tgccagttgc cgatcggggt atgcacgaca
    10261 taacctcgct cgacttgcac cggcccgccc atcatcacgc tgtcgtgctg catccgcatg
    10321 gggatgtttt tgccggtggc ggaaaaaatc atgtccatcg taatcggaga gggtttgttg
    10381 atggcgatgc cgagtgcgcc gtcttcatcg tgtttgcaga tatagacgac cgattgtgaa
    10441 aaaaacgcgt cttccatatc gggcatggcg acgagaaagt ggttggagag gttcatatca
    10501 gcgtttgtcg ggattttcta tcgggttgga aatcatgcag gcgccggcaa gcaggttgcc
    10561 ggaagtatcg gcttgcaccc catcggtttg cggtatgccg ccgccgaaac aggaaaccgc
    10621 gcttaaggaa tttttcggcg agccttggat gattttatcg ctgtacacca aataggcgaa
    10681 ggttttgcgt ttggggtcgt aataacggac aatctgccgg ctcttgaacg cgaagctcgc
    10741 accgtgtttg aaaacttctt tcggtttgcg cacggcggtt tcgtcaaaag aaatcgaaga
    10801 tgccgtctga acgcacgaaa ccgatgcgtc ggacgcgtcc tcttccaaat tgaccatttc
    10861 cttcaagccg cctttttttg catacgaaat ataacaggca accccttgaa cgtcgggatc
    10921 gtcgaatcct tccacttcga tacggtcgtt tttgcccagt atgttgaaaa cggtacttgc
    10981 ccgtccgatt ttatcggttt cgccgctgcc gcaggcagtc agcaggacgg cggcagacag
    11041 cagtagcagt ctgttcatca aaatttcctt atcggttgaa tccccgtttt ccgtgaaggc
    11101 ggcagggctt gctttgtttg gaggggcgca cgttcccaaa atcgggcaac atacggtatg
    11161 cggcttaatg tgctaccctg tgtgtcggaa cacaatatcc gttgcggcat tgaaaatatg
    11221 acgcacaata taaggctgtt tgagccgatt gcaagtatcc gcgcaaagaa ggcgcaagat
    11281 tgggcaaacg gcattttcag acggcataac tgacagtata atccaaacgt ccggctgctt
    11341 tcgtgcagcc ttcagtatta tccaactttt tccgaaggtc gaaccatgcg ctacaaaccc
    11401 cttctgcttg ccctgatgct cgttttttcc acgcccgccg ttgccgccca cgacgcggca
    11461 cacaaccgtt ccgccgaagt gaaaaaacag acgaagaaca aaaaagaaca gcccgaagcg
    11521 gcggaaggca aaaaagaaaa aggcaaaaat ggcgcagtga aagataaaaa aacaggcggc
    11581 aaagaggcgg caaaagaggg caaagagtcc aaaaaaaccg ccaaaaaccg caaagaagca
    11641 gagaaggagg cgacatccag gcagtctgcg cgcaaaggac gcgaagggga taagaaatcg
    11701 aaggcggaac acaaaaaggc acatggcaag tccgtgtccg gatccaaaga aaaaaacgca
    11761 aaaacacagc ctgaaaacaa acaaggcaaa aaagaggcaa aaggacaggg caatccgcgc
    11821 aagggcggca aggcggaaaa agacactgtt tctgcaaata aaaaagtccg ttccgacaag
    11881 aacggcaaag cagtgaaaca ggacaaaaaa tacagggaag agaaaaatgc caaaaccgat
    11941 tccgacgaat tgaaagccgc cgttgccgct gccaccaatg atgtcgaaaa caaaaaagcc
    12001 ctgctcaaac aaagcgaagg aatgctgctt catgtcagca attccctcaa acagcttcag
    12061 gaagagcgta tccgccaaga gcgtatccgt caggcgcgcg gcaaccttgc ttccgtcaac
    12121 cgcaaacagc gcgaggcttg ggacaagttc caaaaactca ataccgagct gaaccgtttg
    12181 aaaacggaag tcgccgctac gaaagcgcag atttcccgtt tcgtatcggg gaactataaa
    12241 aacagccagc cgaatgcggt tgccctgttc ctgaaaaacg ccgaaccggg tcagaaaaac
    12301 cgctttttgc gttatacgcg ttatgtaaac gcctccaatc gggaagttgt caaggatttg
    12361 gaaaaacagc agaaggcttt ggcggtacaa gagcagaaaa tcaacaatga gcttgcccgt
    12421 ttgaagaaaa ttcaggcaaa cgtgcaatct ctgctgaaaa aacagggtgt aaccgatgcg
    12481 gcggaacaga cggaaagccg cagacagaat gccaaaatcg ccaaagatgc ccgaaaactg
    12541 ctggaacaga aagggaacga gcagcagctg aacaagctct tgagcaattt ggagaagaaa
    12601 aaggccgaac accgcattca ggatgcggaa gcaaaaagaa aattggctga agccagactg
    12661 gcggcagccg aaaaagccag aaaagaagcg gcgcagcaga aggctgaagc acgacgtgcg
    12721 gaaatgtcca acctgaccgc cgaagacagg aacatccaag cgccttcggt tatgggtatc
    12781 ggcagtgccg acggtttcag ccgcatgcaa ggacgtttga aaaaaccggt tgacggtgtg
    12841 ccgaccggac ttttcgggca gaaccggagc ggcggcgatg tttggaaagg cgtgttctat
    12901 tccactgcac cggcaacggt tgaaagcatt gcgccgggaa cggtaagcta tgcggacgag
    12961 ttggacggct acggcaaagt ggtcgtggtc gatcacggcg agaactacat cagcatctat
    13021 gccggtttga gcgaaatttc cgtcggcaag ggttatatgg tcgcggcagg aagcaaaatc
    13081 ggctcgagcg ggtcgctgcc ggacggggaa gaggggcttt acctgcaaat acgttatcaa
    13141 ggtcaggtat tgaacccttc gagctggata cgttgatcgg attgccgaaa cggtaggctt
    13201 tatgcaaatc gtgccgatat ggtgcgctgt tccgtgaagt ttgccgtttg ccgtacctgt
    13261 attttccggt ttttggaaat caagagagaa agttaaagaa gaatgtcgaa acctgttttt
    13321 aagaaaatcg cactttatac tttgggtgca atcagcggcg tggccgtcag tctggcggtg
    13381 cagggttttg ccgccgagaa ggacaggcgg gataacgaag tcctgccggt gcaatccatc
    13441 cgcacaatgg cggaggttta cggtcaaatc aaggcaaact actatcagga caaacccgat
    13501 gccgatttgt ttgaaggtgc gatgaagggt atggtggccg gtttggatcc gcattccgaa
    13561 tatatggata aaaaaggtta tgccgagata aaggagtcca ccagcggcga atttggcggc
    13621 ttggggatgg aaatcgggca ggaagacgga tttgtcaaag tggtttcgcc gattgaggac
    13681 acgcctgcgg aacgggcggg ggtgaaaagc ggcgatttca ttgtgaaaat cgataatgtt
    13741 tcgacacgcg gcatgacggt cagcgaagcg gtgaagaaaa tgcggggcaa gccgggtacg
    13801 aagattactt tgacgctgtc gcgcaaaaat gccgacaagc cgatagtcgt caacctgacc
    13861 cgtgccatta ttaaagtgaa aagcgtccgc catcacctga tcgaacccga ttacggctat
    13921 atccgcgtgt cgcagttcca agagcggacg gtcgaaagcg tcaataccgc cgcaaaagag
    13981 ctggtaaagg aaaataaagg aaaaccgctc aaggggctgg tgttggattt gcgcgacgac
    14041 cccggcgggc ttttgactgg cgcggtcggc gtgtcggcgg catttctgcc gtctgaagca
    14101 gtcgtcgtca gcaccaaggg acgcgacggc aaagaccgca tggtactgaa agccattcct
    14161 gaagattatg tgtacgggat gggcggcgat tcgttggcgg gcattcctgc cgagttgaaa
    14221 accataccga tgacggttct gattaattcg ggttcggctt ccgcgtcgga gattgtcgca
    14281 ggtgcattgc aggatcataa acgcgcggtc atcgtcggta cgcagagctt cggcaaaggt
    14341 tcggttcaga ctttgattcc tttgtccaac ggcagcgcgg tcaagctgac aacggcactg
    14401 tattatacgc cgaacgaccg ttctattcag gcgcagggga ttgttcccga tgtcgaagta
    14461 aaagataagg aacgcatttt tgaaagccgc gaggcggatt tggtcggaca catcggcaat
    14521 cctttgggcg gcgaggatgt gaacagtgaa acccttgccg tgccgcttga aaaagatgcg
    14581 gataagcccg ctgtaaaaga aaaaggtaaa aagaaaaagg acgaggattt gtcttcaagg
    14641 cggattccca accctgccaa agacgaccag ttgcggaaag ctttggattt agtcaagtcg
    14701 cccgagcagt ggcagaagtc tttggggctg gcggcgaaaa agccggtttc aaataaagat
    14761 aagaaagata aaaaagataa gaagtaggtt ttgacgatgc cgtctgaaag gatttcagac
    14821 ggcatattat gtttgaaagg acaggttatg agcgattttt taccggaatt tgaaccgtgc
    14881 ggcatttata gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaaa
    14941 tagtacggca aggcgaggca acgccgtact ggtttttgtt aatccactat acttgggtag
    15001 cgattgggtt tcagacggca tacattcagg atttcaccgc cttatgccgt ctgaaagacg
    15061 tttccgaccc atccctacta cacactttgt ccgcaaacgc atcacaggca agattatgga
    15121 agttatccaa tacccaaatt cccccttcaa actccaccaa cccttcccgc ccgcaggcga
    15181 ccagcccacc gccattgcag gcctgctcga agggctttca gacggccttg cctatcaaac
    15241 cctgctcggc gtaaccggtt cgggcaaaac ctacaccatg gcgaacgtca tcgcccaaag
    15301 cggccgcccc gccatcatca tggcgcacaa caaaaccctt gccgcccagc tttacgccga
    15361 aatgcgcgaa tttttccccg aaaacgcagt ggaatatttc gtctcctact acgactatta
    15421 ccagcccgaa gcctatgtgc ccagccgcga cttgttcatc gaaaaagaca gcgcgatcaa
    15481 tgaacacatc gaacaaatgc gcctttccgc caccaaaaac ctgatgacgc gcgacgacgt
    15541 gattatcgtc gccaccgtgt ccgccattta cggtatcggc gacccgaccg agtatcaaca
    15601 aatggtgttg tccgtcaaag aaggcgatac catagcccag cgcgacatca tcgccacgct
    15661 cgtttccatg cagtacgaac gcggcgattt ggacttcaaa cgcggcagct tccgcgtgcg
    15721 cggcgacgtg attgacgtgt accccgccga aagctccgaa aacgccttgc gtatcagcct
    15781 gttcgacgac gaaatcgacc gcctcgatat gttcgacccg ctttcaggca gccttattca
    15841 acgcgtcggc cgctacaccg tcttcccgtc cagccactac gttaccccgc gcgacaccgt
    15901 attgcgcgcc tgcgagtcca tcaaagaaga attgcgcgaa cgcatcgaat ttttcgcccg
    15961 cgaacaacgc cccgtcgagc aacaacgcat cgaacaacgc acccgcttcg acctcgaaat
    16021 gctctacgaa atgggcttct gcaaaggcat cgaaaattat tcccgccact tctccggcaa
    16081 aaaagaaggc gaaccgccgc ccacgctgat ggactatctg cccgacaacg ccatcatgtt
    16141 catcgacgaa agccacgtta ccgttaccca aatcggcggc atgtacaaag gcgacgcatc
    16201 gcgcaaacaa aacctcgtcg actacggctt ccgcctgcct tccgcccgcg acaaccgccc
    16261 gctcaaattc cacgaatttg aaaaagtcat gccgcaaacc gtcttcgttt ccgctactcc
    16321 cgccaaatac gaagaagaac acgccggaca agtggtcgaa caagtcgtcc gccctacagg
    16381 gctggtcgac ccccaaatca tcatccgccc cgtcgccacc caagtcgatg acttaatgag
    16441 cgaaatcaac gaccgcatcc aaaaaggcga acgcgttctc gttaccaccc tcaccaaacg
    16501 catggcggag caactcaccg actattacag cgaactcggt atcaaagtgc gctacctgca
    16561 cagcgacatc gacaccgtag agcgcgttga aattattaga gatttgcggc ttggactgtt
    16621 tgacgtactt gtcggcatca acctcttgcg cgaaggcttg gacatccccg aagtctccct
    16681 tgtcgccatc ctcgacgccg acaaagaagg cttcctgcgc tcgcaccgca gcctgattca
    16741 aaccataggc cgcgccgcgc gcaacgtgaa tggcgttgca attttgtatg ccgacaaaat
    16801 caccgactcc atgaaagctg ccatcgacga aaccgaacgc cgccgcgaaa aacaaattaa
    16861 attcaacgaa gaacacggca tcgtgccgca gcagattaaa aaacaggtca aagacatcat
    16921 cgacggcgtg taccacgaag aagacagcgg caaaggccgt agacaaggca aaaacaaagt
    16981 taaagtcggg gagattcata acgaagaaga cgcgattaaa gaaatcgcca aactggaaaa
    17041 agccatgcag caggcggctc gggatttgca gtttgaggaa gcggcggtta tgcgtgatag
    17101 aatacggaat attaaggaaa gcctgttgtt tggggcagag taatgaaata gtttaatatt
    17161 ctcagcttaa tgtataaagg ataattttat gaaattgtca aaaacaagaa tagataaatc
    17221 tggcttagca ttggctaaac aacaatataa agatgaaatt gattttattg aattggaaga
    17281 atgttttgat ttgtataggc aatcacatct ttcaccatta tctaaaacaa ctattgatat
    17341 tcaaaatatt cttagggaat atattggtga gtattatata gctcagcgac taaaaagaaa
    17401 accacagata atcagaaagt taaataggct tagcgttaga ctaactcagt tgcaagacat
    17461 tggtggttgt agaattattg ttccaacaaa tagagatgtt gataagatat ataagttttt
    17521 atcaagtaag aaggataatc ttgatttttt aataaaaaaa gtaaccgatt accgtgaaaa
    17581 aggtagagat gattcagggt atagagcttt acatataatt atagaaagag aaaatcttaa
    17641 ctttgaatta caaattagaa gtaggataca acattattgg gcagaaagta tagagaaaac
    17701 ctctgttgtt tatggatatt acttaaaaga gcaagaaggg gatagagatg taattaacta
    17761 ttttaaagaa ttatcagatg ttttttatga aattgaatca gggagaaaac caactactat
    17821 acaaaagtta aatcttgaag atttaagaaa aagatgtgaa gttattattc agaaatcaga
    17881 tactcataaa atattaaata gctatgttaa tgaaggtata attagtgcgt tgatagaaaa
    17941 ggaaaagaga aatactaatt cattgaataa ctggatacta atttttgatt ggaatgcagg
    18001 ggttttcgtt agttgggatg ttgtagctca agatccgaag caagccgttg aggtatatgt
    18061 taattatgag aatcagtatc catctttaga ggggttcgag gttgttttga taggatcatc
    18121 cgatatcgct tctgtacaaa aaacacatag tcattatttt ggcatagcct catatgaaaa
    18181 tattctagaa acacttgatg aatcaatttt ttgctttgct aaaaaagatg atattgatat
    18241 tggggcaaga agaatattgg cagcaatggt aaggcataaa ttttggggaa caaaaacagt
    18301 aacatcagaa actttaaaaa atcatttctg ccaaaatctt tttggatttg attattcttt
    18361 aagggattta ataagaaaag aattaataaa atatggaaga gataaagatt tatcattgaa
    18421 tatagcaaag aaaatggaaa tagaatcgta tttataagca agcgcagctt gtatccccat
    18481 caaccgtgtg cgtggctacg ccacacacct tacctgcgta tggcacaaaa actttaaaac
    18541 cgaggtgtag ggtgtgtgcg gtacgcacgc acgcgttctt tgtagtgcaa accactgctt
    18601 caaactttca gacgacctca aacgccgtct gagaatctat ggcataaagg ccgtctgaaa
    18661 aaatggtttc agtacaactg ccactggttg taacttgatt aaaaccaccc tttcagacag
    18721 cctgccgt
//
LOCUS       DBBZYD010000035        18359 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.035, whole genome shotgun sequence.
ACCESSION   DBBZYD010000035 DBBZYD010000000
VERSION     DBBZYD010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18359
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.035"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..183
                     /locus_tag="ACJJDL_000986"
     CDS             <1..183
                     /locus_tag="ACJJDL_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7573714.1"
                     /translation="KKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQNHIN
                     GIENFWNQAKRVLRKL"
     gene            complement(420..1523)
                     /gene="dnaN"
                     /locus_tag="ACJJDL_000987"
     CDS             complement(420..1523)
                     /gene="dnaN"
                     /locus_tag="ACJJDL_000987"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HGG7573715.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERASILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(1758..3314)
                     /gene="dnaA"
                     /locus_tag="ACJJDL_000988"
     CDS             complement(1758..3314)
                     /gene="dnaA"
                     /locus_tag="ACJJDL_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HGG7573716.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     VSEGMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRQAAGSASRPESVA
                     VAKARTDVQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            3606..3740
                     /gene="rpmH"
                     /locus_tag="ACJJDL_000989"
     CDS             3606..3740
                     /gene="rpmH"
                     /locus_tag="ACJJDL_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HGG7573717.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            3743..4108
                     /gene="rnpA"
                     /locus_tag="ACJJDL_000990"
     CDS             3743..4108
                     /gene="rnpA"
                     /locus_tag="ACJJDL_000990"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HGG7573718.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVHRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            4173..4394
                     /gene="yidD"
                     /locus_tag="ACJJDL_000991"
     CDS             4173..4394
                     /gene="yidD"
                     /locus_tag="ACJJDL_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HGG7573719.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            4566..6203
                     /gene="yidC"
                     /locus_tag="ACJJDL_000992"
     CDS             4566..6203
                     /gene="yidC"
                     /locus_tag="ACJJDL_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HGG7573720.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRTQGEVVS"
     gene            complement(6284..7009)
                     /locus_tag="ACJJDL_000993"
     CDS             complement(6284..7009)
                     /locus_tag="ACJJDL_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HGG7573721.1"
                     /translation="MSEGMVSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAE
                     KTARAHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVA
                     DPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLK
                     ALEQRSRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQSVVSKTVA
                     DWRRMKEMPNLKKRPTIFVMYAG"
     gene            complement(7056..7646)
                     /locus_tag="ACJJDL_000994"
     CDS             complement(7056..7646)
                     /locus_tag="ACJJDL_000994"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HGG7573722.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLAGRFPEALIVGADQVAWCDGRQWGKPMNLANAHKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEAL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            7794..8297
                     /locus_tag="ACJJDL_000995"
     CDS             7794..8297
                     /locus_tag="ACJJDL_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HGG7573723.1"
                     /translation="MSDPNLIDSEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            8331..8510
                     /gene="rpmF"
                     /locus_tag="ACJJDL_000996"
     CDS             8331..8510
                     /gene="rpmF"
                     /locus_tag="ACJJDL_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HGG7573724.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            8685..9212
                     /locus_tag="ACJJDL_000997"
     CDS             8685..9212
                     /locus_tag="ACJJDL_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HGG7573725.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            9300..10355
                     /gene="plsX"
                     /locus_tag="ACJJDL_000998"
     CDS             9300..10355
                     /gene="plsX"
                     /locus_tag="ACJJDL_000998"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HGG7573726.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENADGL"
     gene            10491..10742
                     /locus_tag="ACJJDL_000999"
     CDS             10491..10742
                     /locus_tag="ACJJDL_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HGG7573727.1"
                     /translation="MKTLEKRMKALDKQMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            10769..11184
                     /locus_tag="ACJJDL_001000"
                     /pseudo
     CDS             10769..11184
                     /locus_tag="ACJJDL_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11204..11407
                     /locus_tag="ACJJDL_001001"
     CDS             11204..11407
                     /locus_tag="ACJJDL_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573728.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPVHGNLHLKTICIPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            11434..12396
                     /locus_tag="ACJJDL_001002"
     CDS             11434..12396
                     /locus_tag="ACJJDL_001002"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HGG7573729.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDATGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGTVVLSASDKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            12443..12814
                     /locus_tag="ACJJDL_001003"
     CDS             12443..12814
                     /locus_tag="ACJJDL_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HGG7573730.1"
                     /translation="MKRQAFFKPIACAAFLSAISLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLILIDYFVPPELFVKLGQHL"
     gene            12840..13766
                     /gene="fabD"
                     /locus_tag="ACJJDL_001004"
     CDS             12840..13766
                     /gene="fabD"
                     /locus_tag="ACJJDL_001004"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HGG7573731.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFTGQAVVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVKQICAESTQGEVVEAVNFN
                     SPGQVVIAGNTAAVERAMLAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQVAAFIEAH"
     gene            13905..15770
                     /gene="msbA"
                     /locus_tag="ACJJDL_001005"
     CDS             13905..15770
                     /gene="msbA"
                     /locus_tag="ACJJDL_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HGG7573732.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            15870..17435
                     /gene="guaA"
                     /locus_tag="ACJJDL_001006"
     CDS             15870..17435
                     /gene="guaA"
                     /locus_tag="ACJJDL_001006"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HGG7573733.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRDIFDDAPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAKEKKLTNAKWLAQGTIYPDVIES
                     AGAKTQKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            17497..18243
                     /gene="fabG"
                     /locus_tag="ACJJDL_001007"
     CDS             17497..18243
                     /gene="fabG"
                     /locus_tag="ACJJDL_001007"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HGG7573734.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         4638 a         5548 c         4369 g         3804 t
ORIGIN      
        1 aagaaaatca tgccggacag cattgtttat accgatagtc tgagcagctg cgacaagttg
       61 gacgtgagcg gttttatcca ttaccgcatc aaccattcca aggagtttgc agaccgtcag
      121 aaccacatta acggcattga gaatttttgg aatcaggcaa aacgcgtctt gcgaaaatta
      181 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacga
      241 aaccgattca cttggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcgagg
      301 caacgccgta ctggtttttg ttcatccact atacctttcc gacagccgaa caaaaccccg
      361 aatccgtctg cacggttcgg ggtatatctc caatacgggc atcgtgttcc ggaaaaccgt
      421 caaatccgca tcggcatcac aatatatttg aaattcggat tgttcggcac ggtaaacagc
      481 gtcgagcggt tggcatcgcc gaaggcaagc tgcatatcgt cggaatggat gttgcgcaac
      541 acgtccatca gatagccgat attgaaaccg acttcgagtt cgccgccctg ataggcgatt
      601 tcgatttctt cgcgcgcttc ttcctgctcg ttgttgctgc acacaacgct caacaggccg
      661 ggttgcaaaa acaatcgcgc accgcggaat ttttcattgg caagaatcga tgcacgttcc
      721 aacgcgccca acaattctgc cctcgacaac acgaaaatct tgtcgttgtc caaaggaatc
      781 acgcggttga aatcggggaa tttgccgtcg atgaccttgc tgacgatggt cgtgccgttg
      841 cattggaaac gcacctgttt gtccagcagc tcgatttgaa tcggatcgtc ggggttgttc
      901 aacagtttga acagttccag caccgttttg cgcggcaaaa tcacttcggc gcgcggcaaa
      961 tccgcatcaa tcgcgcaggc tgcataggca aggcggtgtc cgtcggtcgc cacaaggcgc
     1021 aactggctgc cctcaacctg catcagcaga ccgttgagat aatagcggat gtcctgcacc
     1081 gccatgctgt actgcacttg cgacagcatg gttttgaaac gctcctgctc cagcgagaaa
     1141 gtcgcgctga tgtcctcgcc gacattcatc atcggaaaat cggcggcagg cagggtctgc
     1201 agggcaaaac gcgatttgcc cgccttcagc gtcagacggc tgtcgtccca atccagcgac
     1261 accagcgcac cggcaggcag cgcgcgcaaa atgtcctgaa atttcttggc attggtggtg
     1321 atgcggaagt cgcccgcgcc gccctcggga cccgcagtgt cgatttggat ttccaaatcg
     1381 gttgccaaga gtttggtctg accgcctttt ccctcaatca ggacgttgga caggatgggc
     1441 agggtgtggc ggcgttcgac aatgccggta acggcttgca acggcttgag caggctgtcg
     1501 cgctcggctt gtaaaatcaa catgttcgct cctttaaatc ggtttgtata gtggattaaa
     1561 tttaaatcag gacaaggcga cgaagccgca gacggtacaa atagtacgga accgattcac
     1621 ttggtgcttc agcaccttag agaatcgttc tctttgagct aaggcgaggc aacgccgtac
     1681 tggtttaaag ttaatccgct atatctttac ccttcggacg gcatgggcaa tatcatgtcg
     1741 tctgaaaacg ttttccatca gttttgaatc agaatcagca gcttttcata atcctgagcc
     1801 aattccggat cttcttcgcg cagtttcgcc actgccctga tgccgtgcat aacggtcgta
     1861 tggtcgcgcc caccaaacga atcgccgata gacggcaggc tcaaagtagt cagttctttg
     1921 gtcaggctca tcgccacctg gcgcggacgg gcaatgtttc gtgtccgttt cttaccgagc
     1981 acatcgctga ttttgatgcg gtaatatttc gccaccgcat cgatgatgat gtcggcggtg
     2041 atgactttgt gcttctcggc aataatgtcc tgcaaagcgg tacgcgccaa atcgatgtcg
     2101 atgacgggac ggttcataaa gcggctgctc gctccgacac gattaaacgc gccttcaagc
     2161 tcgcgcacgt tggaacggat cagattggca atgaacagcg cggcttcgtc ttcgatactg
     2221 atgcccgccg cttccgcctt tttctgcaaa atggcgatgc gcatttccaa ttcgggcggc
     2281 tcgagttcca aagtcagtcc ccatgaaaaa cgggatttga ggcggtcgtc catgccttcg
     2341 attttcgcag gcaacacatc gcaagtgagg atgagctgtt ttttctcgtt gtggaaatgg
     2401 ttgtacagat agaaaaactc ttccatcgta cggtctttgc ctttgatgaa ctggatgtcg
     2461 tcgataatca gcaggtcgta ttgcttgtat tgctgcttga acacgtcgta agtgttgttg
     2521 cgaaccgcct tcataaagct gcggatatag tcatccgaat gcatatagcg cactttggca
     2581 tcgggacggt ttttcagcag ctcgttgccg accgcctgca caaggtgggt tttgcccaaa
     2641 cccgtactgc catagaggaa gaacgggttg taactctgcc ccgggctttc cgcaatcgcc
     2701 tgcgccgcag ccgccgcaag gcggttgccc ttaccttcta ccaacgtatc aaacgtgtaa
     2761 tccggagaca ggttggtctg ctcgtaacgc gcctcttccg catcgcgctg cacgtccgtc
     2821 cgtgctttgg caactgccac cgattccggc cgggaagcag acccggcagc ctgacgcggc
     2881 tcgtgcggca ggtttttcat acgttccgcc aaaatatccg ccgccgtttt cgacgcagcg
     2941 ggtttgacag gctcttcaga cggcagctcg tccaacagaa cctcctgcac gggcattccc
     3001 tccgacaccg catgcaagga cggctcggca ggttcgacag caccttcaac cgccgccatc
     3061 tcataacgca cgccttctcc cggtttgaat acgaaggcgg aacggccggc agccaactct
     3121 tccctcaccg cttctatttt tccggcaaac tggctcttga gcatattgca ggcaaactgg
     3181 ttcttgccgt acaccaccca tacgccaccc tcctcaccaa cggtaagggg cgcaatccat
     3241 tgcgcaaact gcccttgagg caacatatcg tgaagacggc ggaggcacag cggccaaaac
     3301 tctgctaatg tcatggataa gctcgaatcg gtaaaaatga aatcgaaaac aaagaaaata
     3361 taatattttc aaaaagaaaa caaatctgtt gaacgcacat cggttcaaaa cgcgactgcc
     3421 cgattatacc gactcacgaa tattttatcc acaacccgtg caaaaattta tccacagaaa
     3481 ggcggcggaa atccgcaggc aatcgggcaa tcttcctgca aagtttctat attgattgac
     3541 aaaagcggca aattggagtg taattcacgg tttaattatc tacccattct attttaggaa
     3601 acatcatgaa acgcacttat caaccttccg ttaccaaacg caaacgcacc cacggcttcc
     3661 tggtgcgctc caaaacgcgc ggcggccgcg cagtattggc cgcacgccgt gccaaaggcc
     3721 gcaaacgcct ggcggtataa ttttggacta ccgcttcgga aggcagtacc gcttgttgaa
     3781 aacggatgat ttttcatccg tttttgcatt cagaaaccgc cgcagccgcg acctgctgca
     3841 agtttcgcgc tcaaacggca acgggctggg ccatccccgc atcggtctgg tggtcggcaa
     3901 aaaaaccgcc aaacgcgcca acgaacgaaa ttatatgaag cgcgttatcc gcgactggtt
     3961 tagattgaac aaaaaccggc tgccgccgca ggatttcgtc gtgcgcgtcc accgtaaatt
     4021 cgacagggct accgcaaaac aggcaagggc ggaactggca caactcatgt tcggcaaccc
     4081 cgcaaccgga tgcaggaaac aggcatgatc agaacggtac tctgcaggca aggttcagac
     4141 ggcaacgggt ttcccataca aggaacatcc cgatgaactt cctattgtcc aaactcctgc
     4201 tgggactgat acggttctac caatattgca tcagcccgct gattccgccg cgctgccgtt
     4261 atacgccgac ctgttcgcaa tacgcggtcg aagcggtcaa aaaatacggc gcattcaaag
     4321 gcggccggct cgccatcaag cgcattgcac gctgccaccc tttcggcgga cacggacacg
     4381 accccgttcc ctgacccgac gcaatattca aattgcacgc tttcctttta tttcccatcg
     4441 gtttctatat aatgccgtct gaagcttcgg gcaggcggca cgaccgccgg gtatgaagcc
     4501 cgcccttatt ccccgtctat cggaacacgc aacctgcggc atttccgacc attcaggaaa
     4561 ctcttatgga ttttaaaaga ctcacggcgt ttttcgccat cgcgctggtg attatgatcg
     4621 gctgggaaaa gatgttcccc actccgaagc ccgtccccgc gccccaacag gcagcacaac
     4681 aacaggccgt aaccgcttcc gccgaagccg cgctcgcgcc cgcaacgccg attaccgtaa
     4741 cgaccgacac ggttcaagcc gtcattgatg aaaaaagcgg cgacctgcgc cggctgaccc
     4801 tgctcaaata caaagcaacc ggcgacgaaa ataaaccgtt catcctgttt ggcgacggca
     4861 aagaatacac ctacgtcgcc caatccgaac ttttggacgc gcagggcaac aacattctaa
     4921 aaggcatcgg ctttagcgca ccgaaaaaac agtacagctt ggaaggcgac aaagttgaag
     4981 tccgcctgag cgcgcctgaa acacgcggtc tgaaaatcga caaagtttat actttcacca
     5041 aaggcagcta tctggtcaac gtccgcttcg acatcgccaa cggcagcggt caaaccgcca
     5101 acctgagcgc ggactaccgc atcgtccgcg accacagcga acccgagggt caaggctact
     5161 ttacccactc ttacgtcggc cctgttgttt atacccctga aggcaacttc caaaaagtca
     5221 gcttctccga cttggacgac gatgccaaat ccggcaaatc cgaggccgaa tacatccgca
     5281 aaaccccgac cggctggctc ggcatgattg aacaccactt catgtccacc tggatcctcc
     5341 aacccaaagg cggacaaagc gtttgcgccg ctggcgactg ccgtatcgac atcaaacgcc
     5401 gcaacgacaa gctgtacagc accagcgtca gcgtgccttt agccgccatc caaaacggcg
     5461 cgaaagccga agcctccatc aacctctacg ccggcccaca gaccacatcc gttatcgcaa
     5521 acatcgccga caacctgcaa ctggccaaag actacggcaa agtacactgg ttcgcttccc
     5581 cgctcttctg gctcctgaac caactgcaca acatcatcgg caactggggc tgggcgatta
     5641 tcgttttaac catcatcgtc aaagccgtac tgtatccatt gaccaacgcg tcctaccgtt
     5701 cgatggcgaa aatgcgtgcc gccgcgccca aactgcaggc aatcaaagag aaatacggcg
     5761 atgaccgcat ggcgcaacaa caggcgatga tgcagcttta cacagacgag aaaatcaacc
     5821 cgctgggcgg ctgcctgcct atgctgttgc aaatccccgt cttcatcgga ttgtattggg
     5881 cattgttcgc ctccgtagaa ttgcgccagg caccttggct gggttggatt accgacctca
     5941 gccgcgccga cccctactac atcctgccca tcattatggc ggcaacgatg gtcgcccaaa
     6001 cttatctgaa cccgccgccg accgacccga tgcaggcgaa aatgatgaaa atcatgccgt
     6061 tggttttctc cgtcatgttc ttcttcttcc ctgccggtct ggtattgtac tgggtagtca
     6121 acaacctcct gaccatcgcc cagcaatggc acatcaaccg cagcatcgaa aaacaacgca
     6181 cccaaggcga agtcgtttcc taaatgccgc agcatgaaaa atgccgtctg aaacctgttc
     6241 agacggcatt tttattgttc accccctatc ggggcggaaa tcttcaacct gcatacatca
     6301 caaaaatcgt cgggcgtttt ttcagattgg gcatttcctt catcctgcgc caatccgcaa
     6361 ccgttttact gaccaccgac tgagtcggca acgtcaaatc cgtagccgtg cacaagcgcg
     6421 tttcaggatg caggttttcc accgcatccg ccaacaacac atcgttgcga tacggcgttt
     6481 cgataaacag ctgcgtttca ttctgctggc gcgaacgttg ttccaaagcc ttcaaactct
     6541 gaatccgctc atttttttca gacggcaaat aacccttaaa cgcaaagttc tgcccattcg
     6601 cacccgaagc catcagcgcc agcaacaagc tggacggacc gaccaaaggc cgtacttcaa
     6661 aaccgtgttt atgcgccaat gccaccaaat tcgcacccgg atcagccaca gccgggcaac
     6721 ccgcctcgct gacaatgccc atactgcgcc cttcttgcaa aggtttcagc aattccggca
     6781 aagtcttcaa atccgtgtgt tcgttcagcg tttgcaaatt cagttcgcgg ataggcattg
     6841 tcacgcccaa atgtttcaaa tgcgcgcgcg ccgttttttc cgcttccacg acaaaatccg
     6901 tcagcccgac aatcgcctgt tgttcatgcg gcaacaggca cggcgtgtca ggcgtaccca
     6961 aaggcgtagg aatcaaatac aaaacaggag acaccattcc ctcactcatc ggttaaaaat
     7021 gccgtctgaa cccttcagac ggcataaacg ggcagttaca gaacctccac gccctcattt
     7081 ttcaaaaaat caaccagacg gaaaaccggc aaaccgatta aagcattcgg atcggtactc
     7141 tcaatccttt cgatcaacaa tgcacccaaa gcctcgctct tcaacgcaca cgagcaataa
     7201 accgcatcag gctcgcgctc caaatagcgg aggatgtgta gctcgtccaa cttcctcatc
     7261 acgaccaccg tcttatcgat atgccgctgc atcctgcccg taaccgtatt tagcagaacg
     7321 accgcgctgt aaaactcaat ctccctgccg ctcaaatgca tcaacatctt gtgcgcatta
     7381 gcaaggttca tcggcttgcc ccactgcctg ccgtcgcacc acgccacctg gtccgcaccg
     7441 acaatcaacg cctctgggaa acgcccggcc aacgaccgcg ccttaccctc ggcaaggcgc
     7501 aatgccgtct gaggggcgga ttcccccaac atcggcgttt cgtcaaaatc gggggacgcc
     7561 gcctgaaagg caatgccgag cctttccatc tgttcgcggc ggaaaaccga actcgtaccc
     7621 aaaatcaaag gcagttccaa acccatccca tcctccttac cgttgaaaac acgcccgaag
     7681 gggcagtaaa atccagccat gcgccgaaac acggataccc gccttcggcg taccgcaaca
     7741 tttttcttaa aaatattgac gttagaacat ctaaattata tcatatcccg tttatgtcag
     7801 accctaattt gattgactcg gaaatttttg ccgccgaagg gcagaacctg caaggcagtt
     7861 ttctgctgga agaattggat gaacgcgtca gttcgcacga ttatcccgcc gacaggcaga
     7921 ccaaaatatc gtttacactg accggcggtc gcgaccggct gcaacgcctg ttcctcgacc
     7981 tgaacgtcaa agccgatatg cccctgattt gccagagatg tatcaaaccc atgccgttca
     8041 tgcttgatga aagcagccgt atcgtcctgt tttccaacga agagtccttg gacgaatcca
     8101 tgcttgccga cgaagaactc gaaggcatac tgattgaaaa agaactcgac gtgcgcacat
     8161 tggtagaaga ccaaatcctg atgtccctgc ccttttcgcc gcgacacgaa gactgcggcg
     8221 acaatgggac actggaagaa gtcaatcggg acaaacccaa cccctttgct gttttggcag
     8281 gtttgaaaag caattgatta ggacacagtt tatttatcta ggagcttgaa atggccgttc
     8341 aacaaaacaa aaaatcccct tccaaacgcg gtatgcaccg ttcgcacgac gcgctgaccg
     8401 cgcccgcact gtctgtcgac agcacaaccg gcgaagtaca ccgcccgcac cacatttccc
     8461 ccaacggtat gtaccgcggc cgcaaagtgg tcaaagccaa aggcgaataa tccctattcg
     8521 actgactgaa aaagccagaa cattgccatg caattactgg ctttttttgc attggacgca
     8581 ccatccgtcc aaactttcgc catacgtcaa cacacagggg caaagcgttc cgtataataa
     8641 cccgtgaaaa tattccaaaa gccccaacca ccaaggaaat tccgatgaaa cagaaaatct
     8701 ggtacaccta cgatgacatc caccgcgtca tcaaagcatt ggcagaaaaa atccggaacg
     8761 ccgacatcaa atacgatgcc atgattgcca tcggcggcgg cggctttatt ccggcacgta
     8821 tgctgcgctg ttttctggaa attccgattt atgccgtaac caccgcctat tacgacagcg
     8881 acaacgaagg acaggttaca gaagaagtca aaaaagtcca atggctcgac cccgttcccg
     8941 aagccctgcg gggcaaaaac gtactcgtcg tcgatgaagt ggacgacagc cgcgtaacca
     9001 tggaattttg cctgacagag ctgctcaaag aagacttcgg tacgatcggc gtcgccgtac
     9061 tgcacgaaaa aatcaaagcc aaagcaggca aaatccccga aggcattccc tatttcagcg
     9121 gcatcaccgt agaagactgg tggatcaact atccgtggga cgcactcgac atcgacgaac
     9181 acaaccgcct tgccgaggcc ggccgaggct gaccctttca gacggcatat tttccgaacc
     9241 gatgccgtct gaagcccgca cgacccctgc cgcagaccga aaacctaccg gagaacccta
     9301 tgattacact tgccgtagat gccatgggcg gcgaccaagg acttgccgtt accgtacccg
     9361 gcgcaaccgc attcctccaa gcacaccccg atgtccgcct gattatgacc ggcgacgaaa
     9421 cgcaactgcg ccaagccctg accgcggcag gcgcaccgat ggaacgcatc gacatctgcc
     9481 ataccaccca agttgtcggc atggatgaat cccctcagtc cgccctaaag aacaaaaaag
     9541 actcctccat gcgcgttgcc atcaaccaag ttaaagaagg caaagcccaa gccgccgtat
     9601 ccgcaggcaa cacgggcgca ctcatggcaa ccgcacgttt cgtcctcaaa accattcccg
     9661 gcatcgaacg ccccgccatc gccaaattcc ttccttccga caccgaccac gttaccctcg
     9721 ccctcgacct cggcgcaaac gtcgactgca cgcccgaaca gctcgcccaa tttgccgtta
     9781 tcggcagcga actcgtccac gcactccatc ctcaaaaagg acagccgcgt gtcgggctgg
     9841 tcaacgtcgg cacggaagac atcaaaggta cggacaccgt caaacaaacc tacaaactgc
     9901 tgcaaaacag caaactcaac tttatcggca acatcgaaag caacggcatc ctgtacggcg
     9961 aagcagatgt cgtcgtcgcc gacggctttg tcggcaacgt catgctcaaa accatcgaag
    10021 gcgcggtcaa attcatgagc ggagccatcc gccgcgaatt ccaaagcaac ctgttcaaca
    10081 aacttgccgc cgttgccgcc ctacccgccc tcaaagggct gaaaaacaaa ctcgatccgc
    10141 gcaaattcaa cggggccatc ctgctcgggc tgcgcggcat cgtcatcaaa agccacggcg
    10201 gcacagacga aaccggtttc cgctacgcac tcgaagaagc ctaccacgaa gccaagtccg
    10261 ccggcctttc caaaatcgaa caaggcgttg ccgaacaact cgccgcactc gaaactgcca
    10321 aagccgtcca aaacgaaaat gccgacggtc tgtaacacac acgatgccgt ctgaacgccc
    10381 ccgccccttt cagacggcat ccgcccgcac caaacctgcg ggcgcggacg gcgatgcgcc
    10441 tgtccggcac ttcccaaata cttccctgta aaataaggag tatttgaaaa atgaagacat
    10501 tagaaaaacg gatgaaagct ctagacaaac agatgatgaa gttcggaaaa tcccttgaag
    10561 gcaggcttga tgcccgtctg attgaatccg cattggatta tattcattat tcggaacgtt
    10621 ttttggcttt tgaaatcctg tgtacttata tcgaagattt cgatgtccgg ctgacggaac
    10681 aagaatcccg ggaaatttct tttatcaaca aggaatttga gatagaaagc acgtccgatt
    10741 aaccaataaa gccaatgggt tgataaacat gaaaacatcg acggtcgttt ttggcggatt
    10801 ttttatggca gacaacggag agcgaatcca aatccccgtt ttggaaaatc ctgacattag
    10861 ggaaatcaat cacttttttc cgtatcaaat tttgagaaaa aagccggcgt ccttgttttc
    10921 agaatcatcc ccgagccgga atttggcgat accgaattaa ctatctattt tgaaaaagga
    10981 tattatttgc caatgattca aacaatttta gaagacgggg atattgaagt caaaaacctt
    11041 aaaacagaaa attacagcgg gaaggcaagg gaaatcttgg gagattccta ccctattgag
    11101 catatctcta aaaatatttc tacaattcaa aatataattt ctgaatttat gatacaaaaa
    11161 caaacaccgg caccaataat ttgatggaaa accaacaatc aaaatgccgt ctgaagcatg
    11221 tttggttttc agacggcatt tccttcgctt aaaacagcgt atcggcaacc ccgccctgcc
    11281 tgtccacggc aatctgcatc tgaaaaccat ctgtatccca aaccacaccc ccatccctgt
    11341 ttccgtcatt tgcaccctgc ccgtattggg caatcatcgg tttttcgctt acaatagccg
    11401 aatctgaacc aactctctaa aaaggccgtt cccatgcagt atgcaaaaat ttccggcacg
    11461 ggcagctatc ttcccgccaa ccgcgtcagc aatgacgacc ttgcccaaaa ggtagatacc
    11521 tctgacgagt ggattaccgc gcgtacgggc atcaagttcc gccatattgc agccgaaaat
    11581 gagaaaacca gcgatcttgc cgccgaagca gcccgccgcg cactggatgc aaccggatta
    11641 gacagcggcg aaatcgattt aattattgtg gcgacggcaa cgccggatat gcagtttcct
    11701 tctaccgcca ccatcgtcca acaaaaactg ggcatcacca acggctgccc cgcgtttgac
    11761 gtacaggcgg tgtgtgcggg ctttatgtac gcgctgacca cggcaaacgc ctacatcaaa
    11821 agcggcatgg caaaaaacgc gctggtcatc ggcgcggaaa ccttcagtcg cattgtagac
    11881 tggaacgacc gcacaacctg cgtattgttc ggcgacggtg cgggcacggt ggttttaagc
    11941 gcgtccgaca aaccgggcat catccacagc aaactcaaag ccgacggcaa ttatctgaaa
    12001 ctcttaaacg tccccgggca aatcgcctgc ggcaaagttt ccggttcgcc gtacatttcg
    12061 atggacggtc ccggcgtgtt caagtttgcc gtcaaaatgc tgtccaaaat cgccgatgac
    12121 gttatcgaag aagccggtta taccgccgct caaatcgact ggatcgtgcc gcatcaggca
    12181 aaccgccgca ttatcgaatc gaccgcgaaa catttaggtt tgagtatgga caaagtcgtc
    12241 ctgaccgtcc aagaccacgg caacacatcc gccgcatcga ttccgctggc tttggatacg
    12301 ggcatccgca gcggacaaat caaacgcggt caaaacctgc tgctcgaagg catcggcggc
    12361 ggtttcgcgt ggggcgcggt attgctgcaa tattgaatac catgccgtct gaagcaggtt
    12421 ttcagacggt atttcccata tcatgaagcg gcaggctttc ttcaaaccaa ttgcgtgtgc
    12481 ggcatttctg tctgccattt cgctgcgcct ccccgtattg ggcgcgtgtt acgcaatatt
    12541 gtccctctat gcgtttgcac tttacggcat cgacaaacgg cgtgccgtgc ggggaaaacg
    12601 ccgcattccc gaacaccgcc tgctgctgcc tgccttgttc ggcggttggg cgggcgcata
    12661 cttgggcagc aggatattca ggcataaaac ggcgaaaaag cgttttgttg tgctgttccg
    12721 tctgactgtt tcaggtaatg tcctggcgac cctcatcctg attgattatt tcgttccgcc
    12781 cgaacttttt gtcaaactcg ggcaacatct ctgacaatcc aaccaaacaa aggaatacca
    12841 tgtcttttgc attcttcttt cccggacaag gttctcaaag cctcggcatg atgaacggct
    12901 ttacagggca ggccgtcgtc aaaaacacat ttgacgaagc atccgccata ttgggtcaag
    12961 acttgtgggc gatgattaac ggtagcgatg ccgaaatcat cggtcaaacc gtcaataccc
    13021 aacccatcat gctcgccgcc ggcgttgccg tttaccgcgc ctatttggaa gcgggcggca
    13081 aaacgcctgc cgccgttgcc ggacacagcc tcggcgaata taccgcactc gttgccgccg
    13141 gcgcattgga ttttgccgac gcggtcaaac tcgtgcgcct gcgcgccgaa ctgatgcagt
    13201 ctgccgtacc gcaaggcgtg ggcgcaatgg cggcgattct cggcttggaa gatgaacagg
    13261 taaaacaaat ttgcgccgaa tccacacaag gcgaagtggt tgaagccgtc aacttcaact
    13321 cgcccggaca agtcgtgatt gcaggcaata ccgccgccgt cgagcgcgct atgcttgccg
    13381 ccaaagaagc cggcgccaaa cgcgccctgc cgctgcccgt gtccgtacct tcccattgca
    13441 gcctgatgaa acccgccgcc gacaaactcg ccgaagccct gaaaaccgtt gaaatcaagc
    13501 agccgcaaat ccgcgtcatc cacaacgccg acgttgccgc ctacgatgat gccgacaaaa
    13561 tcaaagacgc gctcgtccgc cagctttaca gccccgtacg ctggacagaa accgtcaacg
    13621 cccttgtttc agacggcatt gccgaatccg ccgaatgcgg cccgggcaaa gtgttggcgg
    13681 gcttggcaaa acgcatcaac aaggccgccg cgtgcagcgc actgaccgat gccggacagg
    13741 ttgccgcctt tatcgaagcg cactgacttc gttccgcaaa aagcagcctg ccctcttcag
    13801 gctgcttttc acgtccgaac ggcaaacagc cgcatatttg cgctataatt gatgacgacc
    13861 aaaccaccga cagcggctgc cgttgcagtt cccgccctac cgatatgata gaaaaactga
    13921 ctttcggact gtttaaaaaa gaagacgcgc gcagctttat gcgcctgatg gcgtacgtcc
    13981 gcccctacaa aatccgcatc gttgccgccc tgattgccat tttcggcgtt gccgccaccg
    14041 aaagctacct tgccgccttc atcgcccccc tgattaacca cggcttttcc gcacctgccg
    14101 cgccgcccga gctgtctgcc gccgccggca tcatttccac cctgcaaaac tggcgcgaac
    14161 agtttaccta tatggtttgg gggacggaaa acaaaatctg gaccgtcccc ctcttcctca
    14221 tcatcctcgt cgtcatccgt ggcatctgcc gctttaccag cacctatctg atgacttggg
    14281 tctccgtgat gaccatcagc aaaatccgca aagatatgtt tgccaaaatg ctgacccttt
    14341 cctcccgcta ccatcaggaa acgccgtccg gcaccgtact gatgaatatg ctcaacctga
    14401 ccgaacagtc ggtcagtaac gccagcgaca tcttcaccgt cctcacgcgc gacacgatga
    14461 tcgttaccgg cctgaccatc gtcctgcttt acctcaactg gcagctcagc ctcatcgttg
    14521 tcctgatgtt ccccctgctc tccctgctct cgcgctacta ccgcgaccgt ctgaagcacg
    14581 tcatttccga ctcgcaaaaa agcataggca cgatgaacaa cgtgattgcc gaaacccatc
    14641 agggacaccg cgtcgtcaag ctgttcaacg ggcaggcgca ggcggcaaac cggtttgacg
    14701 cggtcaaccg caccatcgtc cgcctcagca aaaaaatcac gcaggcaacg gcggcacatt
    14761 ccccgttcag cgaactgatt gcctcgattg ccctcgccgt tgtcatcttc atcgccctgt
    14821 ggcaaagcca aaacggctac accaccatcg gcgaatttat ggcattcatc gtcgcgatgc
    14881 tgcaaatgta cgcacccatc aaaagccttg ccaacatcag catccctatg cagacgatgt
    14941 tcctcgccgc cgacggcgta tgtgcatttc tcgacacccc gcccgaacag gacaaaggca
    15001 cgctcgcgcc gcagcgtgtc gaagggcgta tcagcttccg caacgtcgat gtcgaatacc
    15061 gttcggacgg catcaaagcc ctcgacaact tcaacctcga catcagacaa ggcgaacgcg
    15121 tcgccctggt cggacgttcc ggcagcggca aatccaccgt cgtcaacctg ctgccccgct
    15181 ttgtcgaacc gtctgccggc aacatctgca tagacggtat cgacatcgcc gacatcaaac
    15241 tcgactgcct gcgcgcccaa ttcgccctcg tctcccaaga cgtattcctg tttgacgaca
    15301 ccctgtttga aaacgtccga tacagccgtc ccgacgcagg cgaagccgaa gtcctgtccg
    15361 ccctccaagc cgccaacctg caaagcctga ttgacagctc cccgctcgga ctgcaccagc
    15421 ccatcggatc gaacggcagc aacttgtccg gcggacagcg gcaacgcgtc gccatcgccc
    15481 gcgccatttt gaaagacgcg ccgatattat tattggacga agccaccagc gcattagaca
    15541 acgaatccga acgcctcgtc caacaagcgc tcgaacgcct gatggaaaac cgcaccggca
    15601 tcatcgtcgc ccaccgcctg accaccatcg aaggggccga ccgcatcatc gtaatggacg
    15661 acggcaaaat catcgaacaa ggcacacacg aacaactgat gtcccaaaac ggctactaca
    15721 cgatgttacg caatatctca aacaaagatg ccgccgtccg gacggcataa acaaaatgcc
    15781 gtccgaaatg gtataatcgc cccgaccctt tcagacggca ctatatccgc cgacccatcc
    15841 gattatcttc aatcactgta aaacccatta tgacccaaga caaaatcctc atcctcgact
    15901 tcggttcgca agttacccag ctgattgccc gccgcgtgcg cgaagcccac gtttactgcg
    15961 aactgcattc cttcgatatg cctttggacg aaatcaaagc cttcaacccc aaaggcatca
    16021 tcctttccgg cggccctaat tccgtttacg aatccgacta tcaggccgat accggtattt
    16081 ttgatttggg cattccggtt ttgggcatct gctacggaat gcagtttatg gcgcaccact
    16141 tgggcggcga agtgcagccc ggcaaccagc gcgaattcgg ttacgcgcaa gtcaaaacca
    16201 tcgacagcga actgacccgc gatattttcg acgacgcgcc caacacactc gacgtatgga
    16261 tgagccacgg cgacaaagtg tccaaactgc ccgacggctt cgccgtcatc ggcaacaccc
    16321 cgtcctgccc gattgccatg atggaaaacg ccgaaaaaca attctacggc atccagttcc
    16381 accccgaagt tacccacacc aaacaaggcc gcgccctgtt gaaccgcttt gtcttggata
    16441 tttgcggcgc acaaccgggc tggacgatgc cgaactacat cgaagaagcc gttgccaaaa
    16501 tccgcgaaca ggtcggcagc gacgaagtga ttttaggttt gtcaggcggc gtagactctt
    16561 ccgtagccgc cgcgctgatt caccgcgcca tcggcgacca actgacctgc gtgttcgtcg
    16621 atcacggttt gttgcgcctg aacgaaggca aaatggtgat ggatatgttc gcccgcaact
    16681 tgggtgtgaa agtgattcac gtcgatgccg aagggcagtt tatggcgaaa ctcgccggcg
    16741 ttaccgaccc tgagaaaaaa cgcaaaatca tcggcgcgga atttatcgaa gtatttgatg
    16801 ccaaagagaa aaaactcacc aacgccaaat ggctggcgca aggcacgatt taccccgacg
    16861 taatcgaatc cgcaggcgcg aaaacccaaa aagcccacgc catcaaatcg caccacaacg
    16921 tcggcggtct gcccgaaaat atgaagctca agctgcttga gccgttgcgc gacttgttta
    16981 aagacgaagt gcgcgaactg ggcgttgctt tgggtctgcc gcgcgaaatg gtgtaccgcc
    17041 atccgttccc cggccccggt ttgggcgtgc gcatcttggg cgaagtgaaa aaagaatacg
    17101 ccgacttatt gcgtcaagca gacgatattt ttattcaaga attacgcaac accaccgacg
    17161 aaaacggcac gtcttggtac gacctgacca gccaagcctt cgccgtgttc ctgcctgtga
    17221 aatccgtcgg cgtaatgggc gacggacgca cttacgacta cgtcgtcgca ctgcgcgcag
    17281 tcatcaccag cgactttatg accgcacatt gggctgagtt gccttactca ctgctcggac
    17341 gcgtgtccaa ccgcatcatc aacgaagtca aaggcatcaa ccgcgtggtg tacgatgtca
    17401 gcggcaaacc gcctgccacc atcgagtggg aataaccagc aaacagggct gcaccgtccg
    17461 gcgcagtctt tcgattatcg gaaaaaagga aaaaatatga gcacacaaga tttaagcggc
    17521 aaaatcgctt tggtaacagg cgcctcgcgc ggtatcggtg cagcaattgc cgacacactg
    17581 gcggcagccg gtgccaaagt catcggtacg gcgaccagtg agagcggtgc ggcggcgatt
    17641 agcgagcggt tggcgcaatg gggcggcgaa ggccgcgtat taaattccgc cgaacccgaa
    17701 accgtcgaaa acctgattgc cgacatcgaa aaaacgttcg gcaaactcga tattctggtc
    17761 aacaacgccg gcatcacccg cgacaacctc ctgatgcgta tgaaagaaga agagtgggac
    17821 gacatcatgc aggtcaacct caaatccgtc tttcgcgcct ccaaagccgt cttgcgcggc
    17881 atgatgaagc agcgcgccgg ccgtatcatc aacatcacat ccgtcgtcgg cgtgatgggc
    17941 aatgccggtc aaaccaacta tgccgcggca aaagcaggct taatcggttt ctccaaatcc
    18001 atggcgcgcg aagtcggcag ccggggcatt accgtcaact gcgtcgcccc cggctttatc
    18061 gataccgaca tgacccgcgc cctgccggaa gaaacccgcc aaacctttac cgcccaaacc
    18121 gccttgggca gattcggcga cgcgcaagac attgccgatg cagtcttgtt cttggcttcc
    18181 gatcaggcaa aatacattac cggccagacg ctgcacgtca acggcggcat gctgatgccc
    18241 tgacggacag ccgtgccgac aatgccgtct gaagcccttt cagacggcat ttgcattccc
    18301 aaacaaaatg aacacacgcc acaccccgcc ctgcccctgc ggatcaggca caagctgag
//
LOCUS       DBBZYD010000036        17641 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.036, whole genome shotgun sequence.
ACCESSION   DBBZYD010000036 DBBZYD010000000
VERSION     DBBZYD010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17641
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.036"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..366
                     /locus_tag="ACJJDL_001008"
     CDS             <1..366
                     /locus_tag="ACJJDL_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7573735.1"
                     /translation="HECTHLSPLLEGIAEGTTVYADKGYDSAENRQHLKEHQLLDGIM
                     RKACRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLK
                     AMCLNLLKAANRLSAPAAA"
     gene            complement(697..1626)
                     /locus_tag="ACJJDL_001009"
     CDS             complement(697..1626)
                     /locus_tag="ACJJDL_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7573736.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAEWDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1757..2506
                     /locus_tag="ACJJDL_001010"
     CDS             1757..2506
                     /locus_tag="ACJJDL_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HGG7573737.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            2629..3210
                     /gene="petA"
                     /locus_tag="ACJJDL_001011"
     CDS             2629..3210
                     /gene="petA"
                     /locus_tag="ACJJDL_001011"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HGG7573738.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            3229..4578
                     /locus_tag="ACJJDL_001012"
     CDS             3229..4578
                     /locus_tag="ACJJDL_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HGG7573739.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            4593..5381
                     /locus_tag="ACJJDL_001013"
     CDS             4593..5381
                     /locus_tag="ACJJDL_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HGG7573740.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5720..7504
                     /gene="rmuC"
                     /locus_tag="ACJJDL_001014"
     CDS             5720..7504
                     /gene="rmuC"
                     /locus_tag="ACJJDL_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HGG7573741.1"
                     /translation="MELMTVLLPLAALLSGVLFTWLLMKSRFQGVLAVLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYEHLQDENYALGNRFSAAEKQIAYLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAAAVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQSSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTEHANETTALSESLEYAAEDEAV"
     gene            complement(7711..8343)
                     /locus_tag="ACJJDL_001015"
     CDS             complement(7711..8343)
                     /locus_tag="ACJJDL_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HGG7573742.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTRKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFSPNRWLEEGETLTVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            8435..9259
                     /locus_tag="ACJJDL_001016"
     CDS             8435..9259
                     /locus_tag="ACJJDL_001016"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HGG7573743.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQTKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     IGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            9328..9891
                     /locus_tag="ACJJDL_001017"
     CDS             9328..9891
                     /locus_tag="ACJJDL_001017"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HGG7573744.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9972..10409
                     /locus_tag="ACJJDL_001018"
     CDS             9972..10409
                     /locus_tag="ACJJDL_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HGG7573745.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            10478..10747
                     /locus_tag="ACJJDL_001019"
     CDS             10478..10747
                     /locus_tag="ACJJDL_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HGG7573746.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            10747..12522
                     /gene="ptsP"
                     /locus_tag="ACJJDL_001020"
     CDS             10747..12522
                     /gene="ptsP"
                     /locus_tag="ACJJDL_001020"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HGG7573747.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLENEIAKIVRCEDE
                     EKAEKLIKQINSVSVEEEADFKGRK"
     gene            complement(13016..13225)
                     /locus_tag="ACJJDL_001021"
     CDS             complement(13016..13225)
                     /locus_tag="ACJJDL_001021"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573748.1"
                     /translation="MPSENLSDGIFLPKQPYFLSGLQNLSETTETTLPSFPQKRESRT
                     QHGKNLSEATTIFSSSFPRRRESRT"
     gene            complement(13242..14180)
                     /locus_tag="ACJJDL_001022"
     CDS             complement(13242..14180)
                     /locus_tag="ACJJDL_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7573749.1"
                     /translation="MLELNGLCKRFGNKTVADDICLTVGRSKILAVLGRSGCGKSTLL
                     NMIAGIIRPDGGEIRLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAESLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVAHLMGLPNTDDDRHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMRYAGAVSGKDTVRIHIEEREIVRFR"
     gene            complement(14189..15064)
                     /locus_tag="ACJJDL_001023"
     CDS             complement(14189..15064)
                     /locus_tag="ACJJDL_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HGG7573750.1"
                     /translation="MPTVRFTESVSKQDLDALFEWAKASYGAKSCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWTDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNTAAGGVSSGELPSETVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAILPETFLPENQDGEVACFEKMDIGGLLDAMLSENMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(15253..15329)
                     /locus_tag="ACJJDL_001024"
     tRNA            complement(15253..15329)
                     /locus_tag="ACJJDL_001024"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15293..15295),aa:Met,seq:cat)
     regulatory      15479..15578
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            15671..17572
                     /gene="thiC"
                     /locus_tag="ACJJDL_001025"
     CDS             15671..17572
                     /gene="thiC"
                     /locus_tag="ACJJDL_001025"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HGG7573751.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTRPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         4312 a         4553 c         4879 g         3897 t
ORIGIN      
        1 catgagtgca cacacctgtc gccgttgttg gaagggatag ctgaaggtac gaccgtctat
       61 gccgacaaag gctatgacag tgcggaaaac cggcaacatc tgaaagaaca tcagttactg
      121 gacggcatta tgcgcaaagc ctgccgcaac cgtccgctga cggaagcgca aaccaaacgc
      181 aaccggtatt tgtcgaagac ccgttatgtg gtcgaacaga gcttcggtac gctgcaccgt
      241 aaattccgct atgcgcgggc agcctatttc ggactgatta aagtgagtgc gcaaagccac
      301 ctgaaggcga tgtgtttgaa cctgttgaaa gcggccaaca ggttaagtgc gcccgctgcc
      361 gcctaaaaag cagcccggat gcctgattat caggtatccg ggcaggatta agggggtatt
      421 tgggtagaat taggagatat ttggggcgaa aacagctgaa aacagctgaa aacctgtgtt
      481 tgggtttcgg ctgtcgggag ggaaaggaat tttgcaaagg tctcagattg ggcaaaaatc
      541 aaaaacagta tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca
      601 aatagtacgg caaggcgagg caacgctgta ctggtttttg ttaatccact atacatgaaa
      661 aaatagaaaa actgccgggt atggttgaat aaggggtcag accggttcca attcgctcag
      721 tccgggcaaa tctgcaaaac cgcgttcgcg tatgatttgg caaaaattgt tcagatagct
      781 cttgtccgta tcttcggtac ggatggcggc atacagtttg ctttgcaatc cgtcggcagt
      841 aatttggcgg tggacgacat agcctttttc aaggtagggc atgactgtcc aatagggaag
      901 ggcggcaatg ccacgtctgc tggcaaccag ttggataatg gcgatggtca gttcgctgtg
      961 tcggcgcggc gggttgatgt ttttcggaat caggattttt ttgggcaaat ccagcatctc
     1021 gtcgggaacg ggataagtaa tcagggtttc cccgataaag tcttccgccg tccaaacgtt
     1081 tttggcggca agcggatggt ctggtgcgca aatgccgacc atttcgtagg caaacagcgg
     1141 ttggaaagaa atatcgtttt gtttttccgc ttcggaaaca atggcaaggt cggcacggtg
     1201 ttgcagcagc agtccgacgg gatccgcttg gaatcccgat acgatatcca attcgacttg
     1261 gggccacatc gggcggaatt cgcccatggc gggcatcagc cagtcgaaac aggtatggca
     1321 ttcgacggca atccgcagct ctcccgcctc tccttccgtg attcgcgcca aatcccattc
     1381 tgcaacagca acttgaggta taagttcgtg ggcgaggcgc agcagccttt cgcccaccgg
     1441 ggtaaagcgc aagggcgtgg atttgcgttc gaacagcggc gtgccgtagt ggttttcgag
     1501 catacggatc tggtgggaaa gagcggattg ggtaaggaaa acccgtttgg cggcaaggga
     1561 gacgctgccg gtttcttcaa gtgccagcag ggtcttgagg tggcgcagtt cgataatgga
     1621 atccatgggg cttcagacgg catattgaac cggcgcatat taaaataatt catatgcggg
     1681 tgcaaatcgg aaaaatgtga attccggaca ttttgcgatt agaatgcccg cttgtttaaa
     1741 gcgattagga aaaaagatgg tattgcgcag ggattttctg acttggtgta atgaaacatt
     1801 gcagacagcg ttgtttaaag attacgcccc taacggtttg caggttgaag ggagggaata
     1861 tatagggaaa atcgttacgt cggtaacggc aagcagggca gcgattgatt ttgctgtgga
     1921 gcagaaggca gatttgcttt tggtacatca cggtatgttt tggaaaaacg agttgccgac
     1981 cgttactggt tggaaaaaag aacggattgc cgcactgtta cggcacgaca tcaatatggc
     2041 aggctaccat ctgcccctgg atgcacatcc cacactgggc aacaatgccc aactcgccga
     2101 cagattgggt tttgcgacag aaaaacggtt cggcgaacaa aacctgctca actcgggcag
     2161 cctgaaacaa gccaagacac tcggcgcatt ggcggcgcat attgaaacag ttttgcaacg
     2221 taagcctgtc gtcatcggca aacccgaacg cgaaatccga cgggttgcat ggtgcagcgg
     2281 cggggcgcag gggttttttc agacggcaat agacgaaggt gtcgatctgt atctgacggg
     2341 ggaaatctct gaagcccaat accatctcgc caatgaaacg ggtacggctt tcatttcggc
     2401 agggcatcac gcgacggaac gttacggcgt acgcgcactg gcagaatcgg cggcagaggt
     2461 tttcgggttg gaagtgtgcc attttgacga aaacaatccg gcttgagtct tgagaaatat
     2521 cataaaactt taccttattt taaataatgc tttgagtatc actgcaaact gggtaaaatt
     2581 gcaacgttta atggctcggt attcccaaaa tattaggacg actgaataat ggataatcaa
     2641 gaaatcaaca acggccgccg ccgtttcctg acactcgcga cctgcggcgc gggcggagtg
     2701 gcagcattgg gtgtggcaac gccgtttgtg gccagttttt tcccttcgga aaaagccaag
     2761 gccgccggtg ctgccgtcga ggtggatgtc agtaaaatcg aagcgggtca gctgctgacc
     2821 gccgagtggc aaggcaaacc gatttgggtg ctcaaccgta cagatcagca gcttaaagac
     2881 ctgaaaggcc tgaacggcga acttaccgat cccaattccg atgcggaaca gcagccggag
     2941 tatgctaaaa acgagacccg ttcgattaag ccgaacatcc ttgtcgccat cggtatctgc
     3001 acccatttgg gctgctcgcc caccttccgt cccgacattg cccctgccga tttgggtgca
     3061 gactggaaag gcggcttctt ctgcccctgc cacggttcga aattcgactt ggccggccgc
     3121 gtatataaag gtgttcctgc cccgaccaac ctggttgtcc cgccatataa atacttgagc
     3181 gacacaacta tcttggtggg cgaagactaa gaataaggaa cgataattat ggcaaaccaa
     3241 accaatagca aagcaaaagc attgttaggc tggatggacg ctcgtttccc cctgtctaaa
     3301 atgtggaatg agcatttggc tcaatactac gcaccgaaaa actttaattt ttggtactac
     3361 ttcggctctt tggccctgct tgtcctcgtg attcaaatcg tcagcggcat tttcctgacc
     3421 atgaactaca aacccgacgg caacctgaac gcctaccatc tgcctgctgc ctttactgca
     3481 gtcgagtaca tcatgcgcga cgtgtccggc ggttggatta tccgctacat gcattccacc
     3541 ggcgcatctt tcttcttcat tgttgtttat ctgcacatgt tccgtggttt gatttacggt
     3601 tcgtacaaaa aaccccgtga gttggtgtgg attttcggtt ctctgatttt cttggcattg
     3661 atggcggaag cctttatggg ctacctgctg ccttggggtc agatgtcctt ttggggtgcg
     3721 caggtaatta ttaacctgtt ctccgccatc cctgttatcg gtccggattt gtccacttgg
     3781 attcgcggcg acttcaacgt ttccgacgtt accctgaacc gcttctttgc cctgcacgtt
     3841 atcgcggtac ctttggtatt gctcggcttg gttgtggcgc acatcatcgc cctgcacgaa
     3901 gtgggttcta acaaccctga cggcgttgaa atcaagaaaa acaaagacga aaacggtatc
     3961 ccgcgcgacg gtatcccatt ccatccttac tataccgtta aagacatctt gggtgtggtt
     4021 gtattcctga ttgtcttctg tgccgtattg ttcttcgcac cggaaggcgg cggctacttc
     4081 ctcgaagcgc cgaacttcga tgcggcaaat gcgctgaaaa cacctccgca cattgcgccg
     4141 gtatggtatt tcacaccgtt ctacgccatt ttgcgtgcga ttccctcgtt cttgggaacg
     4201 caggtttggg gtgtaatcgg tatgggcgcg gcggtcgtgt tgattgccct gctgccttgg
     4261 ctggataggg gcgaggtgaa atccgtccgt taccgcggcc cgattttcaa aaccgcattg
     4321 gtcttgttca tcatttcctt tatcggtttg ggtattttgg gcgcgatggt ggcaaccgat
     4381 acgcgtactt tggtcgcgcg catcctgtcc ttcgtctatt tcgcattctt cctgggtatg
     4441 ccgttctata ccaagctgga taaaaacaaa ccggttcccg aacgcgtaac catgagcacc
     4501 gccaaacaaa aaatcatgtt ctttgtttac gtcggcatta ccgccgtggg tgcttacctg
     4561 tttgcaacca acatctgatg agggcagtca aaatgaaaca agctatgaaa aattggtttg
     4621 ctgccttgct gttggcagta cccatgggtg cggcatttgc ttcgggcggt catgcacact
     4681 atgagaaagt cgatatcgat ttgcgcgacc aagtcagcct gcagcgcggc gcacaaatct
     4741 ttaccaacta ttgcctgtcc tgccactcgg caagcggtat gcgtttcaac cgtttgaaag
     4801 acatcggttt gactgacgaa gaaatcaaga aaaacctgat gtttaccacc gataatgtcg
     4861 gcgatgtcat gcattcggcg atgaacccga aagatgcggc aaaatggttt ggtgctgctc
     4921 cgcccgattt gacattgatt gcgcgttcca aaggtgcaga ctacctttac gcttatatgc
     4981 gcggcttcta taaagatccg acccgtccga gcggctggaa caatactgta ttcgataaag
     5041 tcggtatgcc ccacccgttg tgggaacagc aaggcgttca agccgttgag ttggatgcca
     5101 aaggtcagcc ggttatggta aaagacgaac acggcgagat gaagcctaag ctgtattggg
     5161 aatctaccgg tttgcacagc cgccgtctgc ctaacggcaa agtgatccaa aaagagtacg
     5221 acgcatatgt acgcgatttg gtcaattacc ttgtgtacat gggcgaacct gcacaactgc
     5281 aacgcaaacg tataggctat gtcgtgatga ttttcctatt tgcggttatg ctgcctttgg
     5341 cgtatttcct gaaaaaagaa tattggaaag acgtacacta agcgtttgga acaaaagggc
     5401 aaatccttta gggtttgccc ttttttcatt ttgcctgccg tttgaaaagc ctgaatccgt
     5461 atgccgtctg aacatagctg caacatttca gacggcatca ttctaaaaat gtcagacatc
     5521 gggaacttaa tcagggtttg tggcagattg atattgaatt aggaaaaggt ctgaaaccgc
     5581 aagcagcatg gtaaggcgat gtcgaacagg tttaaagcca atccgctata ttttttggag
     5641 ctatgtcgaa caaacaggta gaatcggaat aagcggcggt tttgtccggt gtgaaaatgt
     5701 ttgaatatta ggataattga tggaactgat gactgttttg ctgcctttgg cggcgttgct
     5761 gtcaggcgtg ttgtttacat ggttactgat gaagagccgg tttcaaggtg tattagccgt
     5821 attgaacgcg cagttggcgg aaaaggcggc aagatgtgat tttgttgaac aggcacacgc
     5881 agaaattgca tcggaattgg ccgttttgga tgggaaatac gagcatttgc aggacgaaaa
     5941 ttatgctttg ggcaaccgtt tttccgcagc cgaaaagcag attgcttatt tgcaggaaaa
     6001 agaggcggaa tcggttcggc tgaagcagtc gtatatcgag ttgcaggaaa aggcacaggg
     6061 tttggcggtt gaaaacgaac gtttggcaac gcagctcgga caggaacgga aggcgtttgc
     6121 cgaccaatat gccttggaac gccaaatccg ccaaagaatc gaaaccgatt tggaagaaag
     6181 ccgccaaact gtccgcgacg tgcaaaacga cctttccgat gtcggcaacc gttttgccgc
     6241 agccgaaaaa cagattgccc atttgcagga aaaagaggcg gaagcggagc ggttgaggca
     6301 gtcgcatacc gagttgcagg aaaaggcaca gggtttggcg gttgaaaacg aacgtttggc
     6361 aacgcaaatc gaacaggaac gccttgcttc tgaagagaag ctgtccttgc tgggcgaggc
     6421 gcgcaaaagt ttgagcgatc agtttcaaaa tcttgccaac acgattttgg aagaaaaaag
     6481 ccgccgtttt accgagcaga accgcgagca gctccatcag gttttgaacc cgttgaacga
     6541 acgcatccac ggtttcggcg agttggtcaa gcaaacctat gataaagaat cgcgcgagcg
     6601 actgacgttg gaaaacgaat tgaaacggct tcaggggctg aacgcgcagc tgcacagcga
     6661 ggcaaaggca ctgaccaacg cgctgaccgg tacgcagaac aaggttcagg gtaattgggg
     6721 cgagatgatt ctggaaacgg ttttggaaaa ttccggcctt cagaaaggac gggaatatgt
     6781 ggtgcaggcg gcggctgtcc gcaaagaaga agacggcggc acgcgccgcc tgcagcccga
     6841 cgttttggtc aacctgcccg acaacaagca gattgtgatt gattccaagg tttcgctgac
     6901 ggcttatgtg cgctatacgc aggcggcgga tgcggatacg gcggcgcgcg aactggcggc
     6961 acacgttgcc agcatacgcg cgcatatgaa aggcttgtcg ctgaaggatt acaccgattt
     7021 ggaaggtgtg aacactttgg atttcgtctt tatgtttatc cccgtcgaac cggcctacct
     7081 gttggcgttg cagaatgacg cgggcttgtt ccaagagtgt ttcgacaaac ggattatgct
     7141 ggtcggcccc agtacgctgc tggcgacttt gcggacggtg gcgaatattt ggcgcaacga
     7201 acagcaaaat cagaacgcac tggcgattgc ggacgaaggc ggcaagctgt atgacaagtt
     7261 tgtcggcttc gtacagacgc tcgaaagcgt cggcaaaggc atcgatcagg cgcaaagcag
     7321 ctttcagacg gcattcaagc agcttgccga gggacgcggg aatctggttg gccgcgccga
     7381 gaaactgcgt ctgttgggtg tgaaggcaaa caagcagctt gcacgcgatt tgaccgaaca
     7441 tgccaatgaa acaacggcgt tgtcggaatc tttggaatat gcggcagaag atgaagcagt
     7501 ctgacttgtg cggaaaaata ttgtttcagc cggagcggga atgccgaaag cgtggcgtaa
     7561 ctgtaccggt tctgatttgg ggtttgtttg aagtacttac caaagccttg tctggcgagg
     7621 tacaccggca aggcagcggt tgtctgagcc ttttgtgttt cagacggcat cagtgcagat
     7681 gatgccgtct gaagaccgta gtgaaagcgg ttagaaaaac ggattgtgcc gtttttcgtg
     7741 tccgatggaa gtcatacgcc cgtgtccggc gacaacttgc acggtttcgg ggagggcgaa
     7801 taatttgttg cggatattat tgattaagtc ggcgtggttg ccgcgcggaa aatcggttct
     7861 gcctatggtt tcgtaaaaca gcacgtcgcc cgcaatcagc aattccgcct cggcgcaata
     7921 aaagacgaca tgtcccggcg tatggcccgg aatatgcagc acttgaaagg catagcgtcc
     7981 gaccgtgagc gtttcgcctt cttcgagcca acggttcggc gaaaatgcgg gcgagacggg
     8041 aaatccgtat tgcgcggtag tttgcggcag cgattggagc aggaattcat cgtccggatg
     8101 cggcccgagg acgggaactt tacgcgtttt cagcatttcg accacgccgc ctgcatgatc
     8161 gagatgaccg tgcgtcagcc agattgccgt gagcgtaagt ttgcggtttg ccaacgcttg
     8221 cagcaggaac ggcacgtcgc cgccgacatc ggtcaggacg gcttcgccgc tttcgtcgtc
     8281 ccaaatcagg gtgcagtttt ggcggaaggg ggtaacgggg aagatttcgt aacgtagggt
     8341 catcggcgtg ttcctaaacg gtttttcaga cggcatcggg tttgccgttt gttttatggc
     8401 ggtttgccgc ccgttttgat attgggggaa tcagatgatt aagaagacaa tcggcggcat
     8461 cataccgatt tttacggcgg ttttcatccc tgcatcggca ggcgcggcgg atttgatgct
     8521 ggcgcaggaa tacaaagggc aggatattgc cggctgggca atgagcgaga aactcgacgg
     8581 cgtgcgcgcc tattgggacg gaaagcacct gataagccgt cagggctacg cgtttacgcc
     8641 ccccaaaggc tttaccgcgc agtttccgcc ttatcctttg gacggcgaat tgtatagcgg
     8701 acgtggtcag ttcgagcaga tttccgctac cgtgcgttct gtttcttcag actggcgcgg
     8761 catccgcctg cacgttttcg atgtacccaa ggcgcagggc aatctctacc aacgtttggc
     8821 agtcgcaacg cagtggctga aaacgcatcc gaacgcgccg attaccatca tcccgcaaac
     8881 caaagtgcgc gaccggcagc acgcgatgga ctttttaaaa caaatcgaag cgcagggcgg
     8941 cgaaggcgtg atgctgcgtc agcccgaatc ccgttacagc ggcggcagga gcagccaatt
     9001 attgaagctg aaaagccaat acgacgacga atgcacggta acgcggcact atgagggcaa
     9061 agggcgaaac gccggacggt tgggcgcgat cggctgcaaa aaccggcacg gcgaattccg
     9121 catcggcagc ggtttcaaag acaaagaccg cgacaacccg cccaaaatcg gcacactgat
     9181 tacctaccgc taccgtggtt ttacgcggaa aggcacgccg aaatttgcca catttgtgcg
     9241 cgtgcgtacc gaccgctgag caggacggtt cagacggcat ccgatacttt ggtttataat
     9301 tttcctttta ccgaccgatt ccgacatatg accgatttag aaaccaaacg ccttgaaaca
     9361 caggcgatgc ttgaaaacgc cgatcttttg ttcgaccaag gccaatgccg tgccgcactg
     9421 caaaaagtgg cggacgagat tacgcgcgat ttgggcggca aatatccgct gctgctgccc
     9481 gtgatgggcg gcgcggtggt gtttacgggg cagttgctgc cgctgttgcg ttttccctta
     9541 gattttgatt atgttcacgt ttcccgttac ggcgacaagc tggagggcgg cgcgttcaac
     9601 tggaagcgta tgcccgatgc ggaacaaatc cggggcaggc acgtcgtcgt gctggacgat
     9661 attttggacg aagggcatac gatgtccgcc attcaagcca aacttttgga aatgggtgcg
     9721 gcaagctgcc gtgcggcggt gttcgccaac aagctgattg acaaacccaa gcctatccga
     9781 gccgattatg tcggactgga tgtgccgaac cgttatgttt tcggttacgg catggatgcg
     9841 gcgggctgct ggcgcaattt gggcgagatt tacgcattgg acggaaaata aggacgcgat
     9901 gccgtctgaa ggctgttcag acggcattgc gcccatacgc cggcaggaca acgaggaaca
     9961 ggacgcataa tatgataggg cttttaatca tcacacacga aaccataggc gaagcctacc
    10021 gcaagctggc acatcatttt tttccgggcg gactgcctga aaacgtccgc atactcggcg
    10081 tgcagccgac ggaagaccaa gacgacatca tcaacaacgc cattgccgcg cttcaggagt
    10141 ttcccgacaa cgacggcgtg ctaattatga ccgatatttt cggcgcgacc ccctgcaatg
    10201 cagcccgccg cctcgtgcgc gaaaacaaat cggcgatttt gaccgggctg aacgcgccga
    10261 tgatggttaa ggccgtccaa tattcgccgg cggcggaaga ccttgccgcc tttaccgaat
    10321 gcgtcaggga ggcggctgta aaaggcattt tcgccatcac gtccgcgccc gaagatttgg
    10381 tgtgccggcg cagcggcgat gccgtctgaa gaagcggcag ggcaggaaaa cattttaaac
    10441 ggcgtctgct gccgatatac ataacacggg aaccgaaatg ctcaaacaat ccatcgaaat
    10501 catcaacaaa ctcggactcc acgcccgcgc gtccaacaag ttcacccaaa ccgcgtccca
    10561 attcaaaagc gaagtctggg ttacgaaaaa cgacagccgc gtcaacggca aaagcattat
    10621 ggggctgatg atgctcgccg ccgccaaggg tacggtcatc gaactggaga cggacggcgc
    10681 ggacgaggcg gaagcgatgc gcgccctgac cgacttaatc aacggctact tcggcgaggg
    10741 cgaataatga gtatcgtgct gcacggcgtg gcggcgggca aaggcattgc cgtcggttgc
    10801 gcccacctga ttgcgcgcgg tacggaggaa gtgccgcagt atgatgttgc ggaggcggac
    10861 accgatgccg aagccgaacg tttcgatgcc gccgtcaaag ccacgcgcaa agagttggaa
    10921 cagctccgca gcgcgattcc cgaaaacgcc ccgaccgagt tgggcgcgtt catctcgctg
    10981 cacctgatgc tcttgaccga tgttaccttg tcgcgcgaac ccgtcgatat tttaagggaa
    11041 caaaaaatca acgccgagtg ggcattgaag cagcagagcg acaaactcgc cgcccaattc
    11101 gacaatatgg acgatgccta tttgcgcgaa cgcaagcagg atatgctgca agtcgtccgc
    11161 cgcatccaca acaacctgat cgggcagggc aacgagttgg aagttgccga caacctgttt
    11221 gacgaaaccg ttctgattgc aaacgacctt tcgcccgccg acacggtttt gtttaaagag
    11281 cagcgcattg ccgccttcgt taccgatgcc ggcggcccca ccgggcatac ggcgattttg
    11341 ggcaggagct tggacatccc gtccgtcgtc gggctgcaca acgcgcgcaa actgattacc
    11401 gaaggcgaaa cggtcattgt ggacggtatc aacggcgtgt tgattatcgc gccggatgag
    11461 tcggtgttga acgaataccg ccgccgtgcc cgcgaatacc gcagccacaa acgcgatttg
    11521 aacaagctca aaaaaaccgc cgccgccacc gccgacgggg tctgcatcga gcttgtgggc
    11581 aatatagaat ccgccgaaga cgtgaaaccg ctgcacaacc tcggcgcaga cggcatcggg
    11641 ctgttccgca gcgagtttct ttacctgaac cgcgatacga tgccgtctga agacgagcag
    11701 tacgaagtgt acagcgcgat tgtcaaaaaa atgaaaggca aaagcgtaac gatacggaca
    11761 gtcgatttgg gtgtggacaa aaacccgcgc tggttcggga aaaacagcac gcccaacggc
    11821 agcctcaacc ccgcgctggg catgaccggc atccgcctgt gccttgccga accggtcatg
    11881 ttccgcaccc agatgcgcgc catcctccgt gcggcggtac acggccccgt gcggatgatg
    11941 tggccgatga ttacctcagt atccgaagtg cgccagtgcc tcatccacct cgacaccgcg
    12001 caacgccagc ttgccgaacg cggcgatgcc ttcggtaaag tcggcatcgg ctgtatgatt
    12061 gaaattccgt ctgccgcgct gaccgtcggc agtattttga aactggtcga tttcatctcc
    12121 gtcggtacca acgacctgat tcaatacatc ttgtccgtcg atcgcggcga cgacagcgtc
    12181 agccacctct accagcccgg ccatcccgcc gtgctgaaaa tgctgcaaca cgtcatccgt
    12241 accgccaacc gcatggacaa agacgtatcc gtatgcggcg agatggcggg cgataccgcg
    12301 tttacccgcg ttttattggg tatggggctg cgccgttttt ccatgaaccc caacaacatc
    12361 ctgcccgtca aaaacatcat tctgcacagc aatgtcggac agctcgaaaa cgagattgcc
    12421 aaaatcgtcc gttgcgagga cgaggaaaag gcggaaaagc tgatcaaaca gatcaacagc
    12481 gtgtctgtcg aggaagaagc cgacttcaag gggcggaaat aaatacggca ggtaaaaaat
    12541 agaaatactt aacaatgccc gcaatctgaa attttgccat tcttgcaaaa tagaaaaccg
    12601 aaacagaaac ccaaaatcgg ccattccctc aaaaacagaa aaccaaaatc agaaacctaa
    12661 aatccgtcat tcccgcgcag gcgggaatct aggtctgtcg gcacggaaac ttatcgggta
    12721 aaacggtttc tttagatttt acgttctgga ttcccgcctg cgcgggaatg acgatgaaaa
    12781 gattgttgtc gcttcggata aatttttgcc gtgttgggtt ctagattcct gcttttgcgg
    12841 gaatgacggc agggtggttt cagttgctcc cgataaatgc cgccatctca agtctcgtca
    12901 ttcccttaaa acagaaaacc gaaatcagaa acctaaaatc ccgtcattcc cgcgcaggcg
    12961 ggaatctagg tctgtcggca cggaaactta tcgggtaaaa cggtttcttg agattttacg
    13021 ttctggattc ccgcctgcgc gggaatgacg atgaaaagat tgttgtcgct tcggataaat
    13081 ttttgccgtg ttgggttcta gattcccgct tttgcgggaa tgacggcagg gtggtttctg
    13141 ttgtttcgga taaattttgc agccctgata aaaaatatgg ctgctttggt aaaaaaatgc
    13201 cgtctgaaag gttttcagac ggcatttgtt tttaagaagc atcagcggaa gcggacgatt
    13261 tcccgttctt cgatatggat gcgtaccgta tccttgcccg ataccgcccc ggcgtaccgc
    13321 atatcgaggt tcagccatag gatgccgtgt tccggatgga ggacggacag gctgaacgat
    13381 tcgggcaaac aggtacggga taatacgcgg cactccatgc cgtcttggtc gaaacgcacc
    13441 gcatgttgcg gaatatggcg gtcatcgtcg gtattgggca gccccatcag atgggcgacc
    13501 tgcacgccgg caggcgtttg aaccaaggtt tcgggcgtac cgcattgaag gattttcccc
    13561 tcgtgcatga cggcgatttc gtctgccgcc gtgcaggcct cttcgggcga atgcgttacc
    13621 aaaacggcag ggatgccgcc cttgcggata cgttcggcag tcatgcggcg cagccggtcg
    13681 cgcaaatgcg tgtccaaact ggaaaacgat tcgtccaaca gcagcaggga agggcggaca
    13741 accaaagcgc gcgccagtgc caaccgttgc ttttcgcctc cggaaagttt ttcaggcttg
    13801 cggtgcgcct cgttttccag tccgacttcg gcaagtgccg ccatggcgag gctttcggct
    13861 tcggctttcg gcattttttg cattttcaaa ccgaatgccg cattttccag tgcactcata
    13921 tggggaaaca gcgcgtaatc ttgaaacatc agcgaaatac ggcgtttttc gggcggcata
    13981 cgggtaatgt tttccccgtt cagccgaatt tcgccgccgt ccggacggat aatccccgca
    14041 atcatattca gcagggtgga ttttccgcag cccgaccgtc ccaaaacggc aagtattttg
    14101 ctgcggccga cagtcaggca gatgtcgtcg gcgacggttt tattgccgaa gcgtttgcag
    14161 agtccgttca gttcaagcat ggcgtatcct ataaacgtat gccgtccagc cactcggaca
    14221 gcggatgggc ggcatcaatc agaccgtaac ggcaaaacgc gtccagcgta accagttgcg
    14281 cgtcgtgcat catgttttcc gacaacatgg catccaacag accgccgatg tccatctttt
    14341 caaaacacgc aacctcgccg tcctgatttt caggcaggaa ggtttcgggc aggatggcat
    14401 cgaatacata caggatttca ttgtgcacac cccggctgac ggggcgcagg ctgtgcagcc
    14461 gagataccgg acggataaac gggaacagcg ttttatccaa accggcttct tcgctgcttt
    14521 cgcgacacac ggtttcagac ggcaattcac cgctggaaac accgccggcg gcagtattgt
    14581 cgagtttgtc gggatcgact gctttgtgcg gactgcgcct gcctatccag aaatgccatc
    14641 ggccgtccga ttcggtcaga ccgttgagat ggacggcgcg gctgagtagt ccgaacgggc
    14701 ggaaagcggc gcgttcgagc gtgaacaagg ggttgccgcc gccgtcggtc aggtcgaaac
    14761 actcgttgcg ccagccgtga agcagccccg ccttgttcca tgtgcgggcg aggtgctgca
    14821 agcgtccgcc catatccgtc cagccgtccg cattcagaaa aatgccgtct gaagactccg
    14881 agcagcctgc ctcccagtct tttttgacgc gctccgccca ttccggcgac agattgccca
    14941 aaggcagacg gttcagatac agcgttttcc agcaactttt tgcaccgtaa cttgcttttg
    15001 cccactcgaa cagggcatca aggtcttgtt tgctgacgga ttcggtaaaa cggacggtcg
    15061 gcatagtcgg ctttcttgaa cataatgcgg aagattgtag ccaaaccgcc tgaatttgca
    15121 accgcaaaca gacggcgggc tgccgttccg atattgcggc aggaaggaaa atccggcaaa
    15181 aaacggaggc ggcaggaaac aggaaacagg caaaacaaaa cccctcggca ttgaaccgag
    15241 gggtttaata tttggttgcg ggagcaggat tcgaacctac gaccttcggg ttatgagccc
    15301 gacgagctac catgctgctc catcccgcgt cagaagatgg aactatacgg cagatttttt
    15361 atgttgtcaa acattatttc cgcgaaaaat cataaaattt tgccgtccgg cggtttatgc
    15421 ctgatttgaa atatcatttt ctttacaaaa gttcatgttc gtgatttaat tttggttaac
    15481 attgaaacag gggtgctgca tgatgttcag gcggctgaga aatacccttt acacccgatc
    15541 tggataatac ctgcgtgggg agttttcacg gattctgcct ttcagacggc attttttgat
    15601 actcgggccg tttgaaaaag caaagtgctc ctgtttcttt attctaaacg agaaaacagg
    15661 agcatttttt atgactacgc caaaaaaaac tgccaaaact tccggcaacg aagcgcgcga
    15721 acttgccgac ttgagcgaag acatcggcat ccgcttcaaa tatccgaact cggagcgcgt
    15781 gtatctgcaa ggcagccgcg acgacatccg cgtgcctttg cgcgaaatcc gtcaggacga
    15841 cacctacacg gcgcaaggca cggaagccaa cccgccgatt cccgtctatg acaccagcgg
    15901 cgtgtacggc gatccggcgg cgcacatcga cctgaaacaa ggtctgccgc acatccgcac
    15961 ggcgtggctg gacgaacgcg gtgataccga aatcctgccc aagctttcca gcgaatacgg
    16021 catcgaacgc gcacacgatc cgaaaaccgc ccatctgcgc ttcaaccaaa tcacccgccc
    16081 gcgccgcgcc aaagccggcc gcaacgtaac ccagctccat tacgcccggc aaggcattat
    16141 cacgccggaa atggaatttg tcgccatacg cgaacgtttg aaattagacg aattgtccca
    16201 aaaaccggaa tacgccaaac tcttgaagca acacgcgggg caaagtttcg gcgcgaacat
    16261 cccgacccgt cccgatcaaa tcacacccga attcgtgcgc cgggaaatcg ccgccggacg
    16321 tgcgattatt cccgccaaca tcaaccatcc cgaactcgaa ccgatgatta tcggccgcaa
    16381 cttccgcgtc aaaatcaacg gcaacttggg caattccgcc gtcacttcca gcctgaccga
    16441 agaagtcgaa aaaatggtgt ggtcgctgcg ttggggcgcg gacacaatta tggacttatc
    16501 cacaggcgcg cacatccatg aaacgcgcga atggattatc cgcaacgcgc ccgtccccat
    16561 cggcaccgtg cctatttatc aggctttgga aaaaaccggc ggcattgccg aagatttgac
    16621 ttgggatttg ttccgcgaca ccttaatcga gcaggcggaa caaggcgtgg actatttcac
    16681 catacacgcg ggcgtgttgc tgcgttatgt accgatgacc gccaaccgcc tcaccggcat
    16741 cgtctcgcgc ggcggttcga ttatggcgaa atggtgtttg gcacatcatc gggaaaactt
    16801 cctctacacg catttcgacg aaatctgcga aatcatgaaa gcgtatgatg tgtcgttcag
    16861 cctcggcgac ggcctgcgcc ccggctgcat tgccgatgcc aacgacgaat cccaattcgc
    16921 cgagctgcac accttgggcg aattgaccga taaagcgtgg aaacatgacg tacaagtcat
    16981 gatcgaaggc cccggccatg tgccgctgca acgcgtcaaa gaaaacatga ccgaagagct
    17041 gcaacactgc tttgaagcac ctttttacac actcggcccg ctcgttaccg acatcgcacc
    17101 cggctacgac cacatcacct cgggcatagg cgcggccaat atcggctggt acggcacggc
    17161 gatgctttgt tacgttaccc ccaaagaaca tttggggctg cccgacaaag aagacgtgcg
    17221 caccggcatc atcacctaca aactcgccgc ccacgccgcc gatctcgcca aaggctggcc
    17281 gggcgcacaa ttacgtgaca acgccctgag caaggcgcgt ttcgagttcc gttggcgcga
    17341 ccaatttcgc ttaagccttg accctgaacg tgccgagagc ttccacgacg aaaccctgcc
    17401 tgccgaaggc gcgaaaatcg cccacttctg ctcaatgtgc ggccccaaat tctgctcgat
    17461 gaaaatcacg caggaagtgc gcgactacgc cgacaagcaa aaagcccaac ggcagggcat
    17521 ggaggaaaaa gcggtcgagt tcgtcaaaaa aggcgcgaag atttacagtt gaaacgtcaa
    17581 gcaaaaaatg ccgtctgaaa cccggaaaaa aggcttcaga cggcattctt tcgcttgtga
    17641 a
//
LOCUS       DBBZYD010000037        17433 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.037, whole genome shotgun sequence.
ACCESSION   DBBZYD010000037 DBBZYD010000000
VERSION     DBBZYD010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17433
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.037"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            241..1305
                     /locus_tag="ACJJDL_001026"
     CDS             241..1305
                     /locus_tag="ACJJDL_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HGG7573752.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIVHD
                     DVPTGPGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKEGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1446..1769
                     /locus_tag="ACJJDL_001027"
     CDS             1446..1769
                     /locus_tag="ACJJDL_001027"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HGG7573753.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1841..2164
                     /locus_tag="ACJJDL_001028"
     CDS             1841..2164
                     /locus_tag="ACJJDL_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HGG7573754.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2211..2414
                     /gene="tatA"
                     /locus_tag="ACJJDL_001029"
     CDS             2211..2414
                     /gene="tatA"
                     /locus_tag="ACJJDL_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HGG7573755.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2418..3104
                     /gene="tatB"
                     /locus_tag="ACJJDL_001030"
     CDS             2418..3104
                     /gene="tatB"
                     /locus_tag="ACJJDL_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HGG7573756.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKEIGTDMEGNLHDISNGLKPWEKLP
                     EQRTPADFGVDENGNPLPDAANPASDGISDVMPSERSYTSAETLGDDRQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSR
                     AKPKLRVRKS"
     gene            3118..3888
                     /gene="tatC"
                     /locus_tag="ACJJDL_001031"
     CDS             3118..3888
                     /gene="tatC"
                     /locus_tag="ACJJDL_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HGG7573757.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTEQLKRARPYVIVGAFVIAAVITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3941..4546
                     /locus_tag="ACJJDL_001032"
     CDS             3941..4546
                     /locus_tag="ACJJDL_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HGG7573758.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPADINETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAATFLNLL
                     SGTGHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4562..4915
                     /locus_tag="ACJJDL_001033"
     CDS             4562..4915
                     /locus_tag="ACJJDL_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HGG7573759.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4905..6719
                     /locus_tag="ACJJDL_001034"
     CDS             4905..6719
                     /locus_tag="ACJJDL_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
                     /protein_id="HGG7573760.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALKLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACKSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPL
                     LQNLIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVLLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIHDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6909..7586
                     /gene="misR"
                     /locus_tag="ACJJDL_001035"
     CDS             6909..7586
                     /gene="misR"
                     /locus_tag="ACJJDL_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HGG7573761.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7599..9005
                     /gene="misS"
                     /locus_tag="ACJJDL_001036"
     CDS             7599..9005
                     /gene="misS"
                     /locus_tag="ACJJDL_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HGG7573762.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9123..11549
                     /locus_tag="ACJJDL_001037"
     CDS             9123..11549
                     /locus_tag="ACJJDL_001037"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7573763.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHSLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKNLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALAAANPSLLAEAL
                     HLPPYRHTTHNAVQFQFDSHPLYGDILTARCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTIIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     YPKTLSLRNNTTVTITPILPEDAEAKQQFVRSLGPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLRTDHKIT"
     gene            11594..11839
                     /gene="rpsP"
                     /locus_tag="ACJJDL_001038"
     CDS             11594..11839
                     /gene="rpsP"
                     /locus_tag="ACJJDL_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HGG7573764.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11855..12364
                     /gene="rimM"
                     /locus_tag="ACJJDL_001039"
     CDS             11855..12364
                     /gene="rimM"
                     /locus_tag="ACJJDL_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HGG7573765.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNGELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12364..13113
                     /gene="trmD"
                     /locus_tag="ACJJDL_001040"
     CDS             12364..13113
                     /gene="trmD"
                     /locus_tag="ACJJDL_001040"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HGG7573766.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHPKAAEL
                     AELPHLILLCGRYEGIDERLLQTSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLETIRQEQREIQS"
     gene            13129..13494
                     /gene="rplS"
                     /locus_tag="ACJJDL_001041"
     CDS             13129..13494
                     /gene="rplS"
                     /locus_tag="ACJJDL_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HGG7573767.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13815..14540
                     /locus_tag="ACJJDL_001042"
     CDS             13815..14540
                     /locus_tag="ACJJDL_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HGG7573768.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLSRQDIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFK
                     GINTAQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPSTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPDWCAS"
     gene            14575..15450
                     /locus_tag="ACJJDL_001043"
     CDS             14575..15450
                     /locus_tag="ACJJDL_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HGG7573769.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15527..16441
                     /locus_tag="ACJJDL_001044"
     CDS             15527..16441
                     /locus_tag="ACJJDL_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HGG7573770.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSSDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEFDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALINAMKQ"
     gene            complement(16721..>17433)
                     /locus_tag="ACJJDL_001045"
     CDS             complement(16721..>17433)
                     /locus_tag="ACJJDL_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7573771.1"
                     /translation="LVQQSTDGSDRLYAYQSGNTLNGGLGDDYLYGADGDDLLNGDAG
                     NDSIYSGNGNDTLNGGEGNDALYGYNGNDVLNGGEGNDHLNGEDGNDTLIGGAGNDYL
                     EGGSGSDTYVFGKGFGQDTVYNYHVDKNSDTMHFKGFKAADVHFIRSGSDLVLSASEQ
                     DNVRISGFFYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQSMSVFGSNTAATGGN
                     VDANTQSVQQPLLVTPSA"
BASE COUNT         4553 a         5525 c         3809 g         3546 t
ORIGIN      
        1 ccgtactggt ttttgttaat ccactataaa tgccatctga agccgattcg gttttcagac
       61 ggcatcatta tttgacctga cgcaaacaga aagccttccg cgtgcttaaa cacatctctt
      121 gtagtaaaat atctaaacag attcaactgg aaacggtcag gcttcttcac gccattccca
      181 tttcaaccgc cgcctgccag attcagacgg tattcctact tgaaaacaag gagcgttaca
      241 atgaaagcag cacgttttta cgacaaaggc gacatccgca tcgaagacat ccccgaaccg
      301 accgtcgccc ccggcaccgt cggcatcaat gttgcctggt gcggcatctg cggtaccgac
      361 ctgcacgaat tcatggaagg cccgattttc attccgcctt gcggtcatcc gcacccgatt
      421 tccggcgagt ccgcacccgt cacgatggga cacgagttct ccggcgtggt ctatgccgtc
      481 ggcgaaggcg tggacgacat caaagtcggt caacacgtcg ttgtcgagcc ttacatcgta
      541 cacgacgacg taccgaccgg cccgggcagc aactaccacc tctctaaaga catgaacttc
      601 atcggcttgg gcggctgcgg aggtggcttg tctgaaaaaa tcgctgtcaa acgccgttgg
      661 gtgcatccga tttccgacaa aatcccgttg gatcaagccg ctttgatcga accgctgtct
      721 gtcggacacc acgcctatgt acgcagcggc gcgaaagaag gcgatgtcgc attggtcggc
      781 ggtgcaggcc cgatcggttt gctgttggct gccgtgctga aagccaaagg catcaaagtc
      841 atcatcaccg agttgagtaa agcacgcaaa gacaaagcgc gcgaatccgg cgttgccgac
      901 tacatcctcg acccgtccga agtcgatgtt gtcgaagaag tgaaaaaact gaccaacggc
      961 gaaggcgtgg acgtggcatt cgaatgtacc agcgtgaaca aagtgttgga tactttggtc
     1021 gaagcctgca aacctgccgc caatttggtt atcgtatcca tctggagcca ccctgcaacc
     1081 gtcaacgtcc acagcgtcgt gatgaaagag ctggatgtgc gcggcacgat tgcctactgt
     1141 aacgaccacg ccgaaaccat caaactggtc gaagaaggca aaatcaacct cgaacccttc
     1201 atcacccagc gcatcaagct ggacgaactg gtttccgaag gcttcgagcg tctgatccac
     1261 aacaacgaat ccgccgttaa aattattgtg agtccaaacc tgtaagcaaa ttacatttgc
     1321 aacagcacaa atgccgtctg aaacgctcag acggcatttt ccaacgaagc gcaacaggcg
     1381 tattgcccga gagcagccgt ttagcctatc attccgaaca aacagaaaca aacagaagga
     1441 aaatcatggg agattccgta ctatccgcca tccaacaaac catcacccag cgaaaatctg
     1501 ccaatccgtc cgaatcttac gtcgcacagc tcttgcataa gggcgaagac aaaatcctaa
     1561 aaaaagtgat tgaagaggcg ggcgaagtgt tgatggcatc caaagacaaa aacccgtccc
     1621 acctggttta cgaagttgcc gacttatggt ttcacaccat gattcttctg acacaccacg
     1681 acctgaaggc ggaagacgta ttggacgaac ttgcgcgccg ccaaggtttg tcgggcttgg
     1741 ccgaaaaagc cgctcgcaca gaatcttgaa tttatattaa aatccgcact ttcccacatt
     1801 caatccgtct gaccgctttt cagacggcat cggagccgtt atggacaact gtattttctg
     1861 caaaatcgcc gccaaagaca ttccggcgca aaccgtctac gaagacggcg aaatggtttg
     1921 tttcaaagac atcaaccccg ctgctccggt tcatctgctg ctgattccca aagtccattt
     1981 cgattcgttg gcacacgccg cgcccgaaca tcagcccctt ttgggaaaaa tgatgctgaa
     2041 agttcccgaa atcgccaaag cggcaggact ggcagacggc ttcaaaaccc tgatcaacac
     2101 cggaaaaggc ggcggacaag aggtcttcca cctgcatata cacatcatgg gcacacccgt
     2161 ataaaccgtt atttcacaat caacccctaa tacttactta aggatacatc atgggcagtt
     2221 tttctctgac gcactggatt atcgtactga ttatcgtcgt tttgatattc ggcaccaaaa
     2281 aactgcgcaa cgtcggcaaa gacctcggcg gtgcggttca tgacttcaaa caggggctga
     2341 acgaaggcac agacggcaaa gaagcccaaa aagacgatgt aatcgaacac aaaaaagacg
     2401 aagacaaagc gtaatttatg tttgatttcg gtttgggcga gctggttttt gtcggcatta
     2461 tcgccctgat tgtcctcggc cccgaacgcc tgcccgaggc cgcccgcacc gccggacggc
     2521 tcatcggcag gctgcaacgc tttgtcggca gcgtcaaaca ggaatttgac actcaaatcg
     2581 aactggaaga actgaggaag gccaagcagg aattcgaagc tgccgccgct caggttcgag
     2641 acagcctcaa agaaatcggt acggatatgg agggtaatct gcacgacatt tccaatggtc
     2701 tgaagccttg ggaaaaactg cccgaacagc gcacgcctgc tgatttcggt gtcgatgaaa
     2761 acggcaatcc gcttcccgat gcggcaaacc ccgcatcaga cggcatttcc gacgttatgc
     2821 cgtccgaacg ttcctacact tccgccgaaa cccttggaga cgacaggcaa accggcagta
     2881 cagccgaacc cgcggaaacc gaccaagacc gcgcatggcg ggaatacctg actgcttctg
     2941 ccgccgcacc cgtcgtacag accgtcgaag tcagctatat cgataccgct gttgaaaccc
     3001 ctgttccgca taccacttcg ctgcgtaaac aggcaataag ccgcaaacgc gatttgcgtc
     3061 ccaaatcccg cgccaaacct aaattgcgcg tccgtaaatc ataaagaggg caatccggtg
     3121 tccgaaacac aaaacgaaca acccgtccaa ccgcttgtcg agcatctcat cgagctgcgc
     3181 cgccgcctga tgtggacggt tgtcggcatc ttagtctgct ttttcggcct aatgccgttt
     3241 gcccaacaac tctatacttt tatcgccgac ccgctgatgg caaacctgcc caaagacacc
     3301 agcatgattg ccaccgatgt catcgcaccg tttttcgtgc cggtcaaagt taccctgatg
     3361 gcggcatttt taatttcgct gccgcatacg ctctaccaaa tctgggcatt tgtcgcgccc
     3421 gcactctacc aaaacgaaaa acgcctgatt acgccgctcg tcctctccag cgtcagcctg
     3481 tttttcatcg gcatggcatt tgcctacttt ttggttttcc ccgtcatttt caaattcctt
     3541 gccagcgtta cccctgtcgg tgtcaatatg gcgacagaca tcgacaaata cctctccttc
     3601 atcttgggga tgtttgtcgc attcggtaca acgtttgaag tccccattgt cgttatcctg
     3661 ttaaccaaaa ttggtgtggt aacaaccgaa cagctcaaac gcgcccgccc ctatgtgatt
     3721 gtcggcgcgt ttgtcattgc cgcagtcatc acaccgcccg atgtgatttc acaaaccctg
     3781 cttgccattc cgctgattct cttatacgaa gcaggtattt ggttcggacg ctttttcacg
     3841 ccacgttcag aacaggatgg cgacatacag ccgcctgcaa caacctgaca ctatgccgtc
     3901 cgaacctccg cctcataccg caacagatta aggaatacct ttgaataccc tctatttagg
     3961 ttcaaacagc ccgcgccgaa tggaaatcct gacacagttg ggctatcagg tcgtcaagct
     4021 gcctgccgac atcaatgaaa cggtcagaca gaacgaagac cctgcccgtt acgttcaaag
     4081 gatggcagaa gaaaaaaacc gaaccgccct gaccctcttt tgcgaaacca acggcacaat
     4141 gcccgatttc cccctgatta ccgccgacac ctgcgtcgtt tcagacggca tcatattggg
     4201 caaaccccgc tcccaagctg aagcggcaac ctttctaaac ctgctgtcgg gaaccgggca
     4261 taccgtcctg actgctgtct gcattcatta tcgcggcaaa acgtcaagcc gcgtccaaac
     4321 caaccgcgtc gttttcaagc ccctgagttc ggaagaaatt tccgcctatg tccaaagcgg
     4381 cgaaccgatg gacaaagccg gcgcctacgc cgtacaaggc ataggcggca tctttatcca
     4441 atctatcgaa ggcagcttca gcggcattat ggggctgccc gtttatgaaa ccgtttcgat
     4501 gttacaggat ttgggatacc gtaccccacc tttcatccga gcctaacccg taaagaccgc
     4561 cgtgaacaga caaaccgctt acctccttac ctctttcagc ctgatcgcac tgataatcct
     4621 gtccctttcc tgggaactgt ggattgcacc gttgcgcccg ggcggctcgt ggctcgcgct
     4681 caaagccctc cccctctgtc tgccgctttc aggcatcttg aaaaagaaaa tctataccta
     4741 ccaatacagc tccatgctgg ttctgattta ctttgccgaa gccgtcatgc gcctgttcga
     4801 cgcctatccc gcagaacaga tttgcgccgc gctttccgca gtattcagca tcatcttctt
     4861 catatcctgc ctgtcgttcg tcaaacaata caaggaaaca aacaatgccc gctgaaacga
     4921 ccgtatccgg cgcgcacccc gccgccaaac tgccgattta catcctgccc tgcttccttt
     4981 ggataggcat cgtccccttt accttcgcgc tcaaactgaa accgtcgccc gacttttacc
     5041 acgatgccgc cgccgcagcc ggactgattg tcctgttgtt cctcacggca ggaaaaaaac
     5101 tgtttgatgt caaaatcccc gccatcagct tccttctgtt tgcaatggcg gcgttttggt
     5161 atcttcaggc acgcctgatg aacctgattt accccggtat gaacgacatc gtctcttgga
     5221 ttttcatctt gctcgccgtc agcgcgtggg cctgcaagag tttggtcgca cacttcggac
     5281 aagaacgcat cgtgaccctg tttgcctggt cgctgcttat cggctccctg cttcaatcct
     5341 gcatcgtcgt catccagttt gccggctggg aagacacccc cctgcttcaa aacctcatcg
     5401 tttacagcgg gcaaggcgta atcggacaca tcggacagcg caacaacctc ggacactacc
     5461 tgatgtgggg catactcgcc gccgcctacc tcaacggaca acgaaaaatc ccgcccgcct
     5521 tgggcgcaat ctgcctgatt atgcagaccg ccgttttagg tttggtcaac tcgcgcacca
     5581 tcttgaccta catagccgcc atcgccctca tccttccctt ctggtatttc cgttcggaca
     5641 aatccaacag gcggacgatg ctcggcatag ccgcagccgt actcctaacc gcgctgttcc
     5701 aattttccat gaacaccatt ctggaaacct ttaccggcat ccgctacgaa actgccgtcg
     5761 aacgcgtcgc caacggcggt ttcacagact tgccgcgcca aatcgaatgg aataaagccc
     5821 ttgccgcctt ccagtccgcc ccgatattcg ggcacggctg gaacagtttt gcccaacaaa
     5881 ccttcctcat caatgccgaa cagcacaaca tacacgacaa cctcctcagc aacttgttca
     5941 cccattccca caacatcgtc ctccaactcc ttgcagagat gggaatcagc ggcacgcttc
     6001 tagttgccgc aaccctgctg acgggcattg ccgggctgct gaaacgcccc ctgacccccg
     6061 catcgctttt cctaatctgc acgcttgccg tcagtatgtg ccacagtatg ctcgaatatc
     6121 ctttatggta tgtctatttc ctcatcccct tcggactgat gctcttcctg tcccccgcag
     6181 aggcttcaga cggcatcgcc ttcaaaaaag ccgccaatct cggcatactg accgcctccg
     6241 ccgccatatt cgcaggattg ctgcacttgg actggacata cacccggctg gttaacgcct
     6301 tttcccccgc cactgacgac agtgccaaaa ccctcaaccg gaaaatcaac gagttgcgct
     6361 atatttccgc aaacagtccg atgctgtcct tttatgccga cttctccctc gtaaacttcg
     6421 ccctgccgga ataccccgaa acccagactt gggcggaaga agcaaccctc aaatcactaa
     6481 aataccgccc ccactccgcc acctaccgca tcgccctcta cctgatgcgg caaggcaaag
     6541 ttgcagaagc aaaacaatgg atgcgggcga cacagtccta ttacccctac ctgatgcccc
     6601 gatacgccga cgaaatccgc aaactgcccg tatgggcacc gctgctaccc gaactgctca
     6661 aagactgcaa agccttcgcc gccgcgcccg gtcatccgga agcaaaaccc tgcaaatgac
     6721 ccgcgccggc ggatgcggat accgcccgaa atgtaaagct ccatgcaaga cattgcaaaa
     6781 aacagcaaac cggtagggaa atacgctatc aaaaaacatt gcagccgtgt taagataaac
     6841 cgtcaaacaa tcttttcacg ccccgcccga aacagggtcg gggcataccc ttacgaaaag
     6901 gaaacaccat gagccgcgta ttactcgtag atgacgatgc cctgctaacc gaactgctga
     6961 ccgaatacct gagcgccgaa ggtctgaacg tccgcagcgt tcccgacggg gaagcaggcg
     7021 tacaggaaat cctgagcggg cagtacgatg tagtcgtatt ggattccatg atgcccaaaa
     7081 tgaacggctt ggatgtcttg aaaaacgtac gcgcccgaag caccgtcccc atcatcatgc
     7141 tgaccgccaa aggcgacgac atcgaccgaa tcatcggctt ggaaatgggc gcggacgact
     7201 atgtccccaa accctgcaca ccacgcgaac tcttggcacg catcaatgcc atcctgcgcc
     7261 gcgcacaaca cagcggcgaa cagaacaacg cacccaacag catctccgtc agcgatgtcg
     7321 tcctgtaccc cgccaaacgc caggcatccg tcaaagacat gccgctcgaa ctgaccagca
     7381 ccgaattcaa cctgctcgaa gtcctgatgc gccatgccgg acaggtagtc agcaaagaaa
     7441 ccctgtccgt cgaagcactc gaccgcaagc tggcaaaatt cgaccgcagt atcgacgtac
     7501 acatctccag catccgccac aagttgggcg atgcctctct gattcaaacc gtacgcggct
     7561 tgggctacct gtttgtcaaa aactgaagca acgggcaaat gaaactgttc caacgcattt
     7621 tcgccacatt ttgcgcagtt atcgtctgtg caatctttgt ggcgagtttt tctttttggc
     7681 tggtgcagaa cacccttgcc gaaaaccagt tcaaccaacg ccgcaccatc gaaaccactt
     7741 tgatgggcag catcatttcc gcattccggg cacgcgggga cgcgggcgcg cgcgaaatcc
     7801 tgacggaatg gaaagacagc cccgtctcat cgggcgtgta cgttatacag ggcgacgaga
     7861 aaaaagatat cctgaaccgg tatatcgaca gctacaccat cgaacgcgcc cggcttttcg
     7921 ccgccggaca cccgcattcc aacctcgtcc atatcgaata cgaccgcttc ggcgaagaat
     7981 acctgttctt caccaaagac tgggacaaac tccaagcccg ccgcctgccc agccccctgt
     8041 tgatccccgg tctgccgctc gccccgattt ggcacgaact catcatattg tccttcatca
     8101 tcgtcgtcgg actgctgatg gcgtacatcc tcgccggcaa tatcgccaaa cccatcagaa
     8161 tcttaggcaa cggcatggac agggtggcaa acggagaact tgaaacccgt atctcccaac
     8221 aggtcgacga ccgcgacgac gaattgtccc atcttgccat ccaattcgac aaaatggtgg
     8281 aaaaacttga aaaactcgtt gccaaagaac gccacctgct ccatcacgtc tcccatgaaa
     8341 tgcgttctcc ccttgcgcgc atgcaggcaa ttgtcggact gattcaggcg cagccccaaa
     8401 aacaggagca atatctcaaa cggctggaag gcgaactgac ccgcatggat acgctggccg
     8461 gggaactgtt aaccctgtcc cgtctcgaaa cttccaatat ggctttggaa aaagaaagcc
     8521 tgaaactcct gcccttcctg ggcaacctgg tagaagacaa tcaaagcatt gcccagaaaa
     8581 acggacaaac ggttaccctg tctgccgacg gaaaaatccc cgaaaataca accatccttg
     8641 ccaacgaaag ctacctgtac cgcgccttcg acaacgtcat ccgcaacgcc gtcaactaca
     8701 gtcccgaagg cagcaccatc ctgatcaaca tcggacaaga ccacaaacac tggataatcg
     8761 acgttaccga caacggcccc ggcgtggacg aaatgcagct cccgcacatc ttcaccgctt
     8821 tctaccgtgc agactccagt gcgaacaaac ccggaacagg actggggctt gcattgaccc
     8881 aacatattat tgaacagcac tgcggaaaaa tcatcgccga aaacatcaaa ccgaacggtc
     8941 tgcggatgcg cttcatcctg cccaagaaaa aaaccggttc caaaacagaa aaaagtgcga
     9001 actgaccata atgccgtctg aaccggcttc agacggcatt gcacaaacag ttaccccaaa
     9061 acaaacacac agcgggtgca tctccaacaa tcacgcacat accgtccgca aaggaatata
     9121 tcatgtcggc acaaaccgat ccgggctact ttttcatgcc caaccacatt attctgatag
     9181 gcgcgagcga acgtccgtac agcctgggcg aacgcgtact cagcaacctg ctgagtacgc
     9241 cctttcaagg aaaaatcacc cccgtaaacc cgcgccacca caccatagcc gggcttcccg
     9301 cctacaccag cctcaacaaa atccccggca atgcagacct gattattgcc gttaccctac
     9361 ccgacagtta cgacaccctc ttcaaaacct gccgcaaaaa gcagctccga cacatcatcc
     9421 tcatacagga ctgggacagc ctgtctgccg cagaactgca caccgccgaa actgccatcc
     9481 gcaaacacca cggcaacgga cttaacatca ccgcctgcac caccgcaggc atccaactgc
     9541 cctcactcgg actcaacatc agtacccaag acggatacgc cgcaggccat accgccatac
     9601 tgaccggcaa tgccgccgtc agccgtcaaa tcgacaacat cctgaacaaa ctccgtcaag
     9661 gcacatcccg ccacatcagc ctgcatcccg gcatcagccc catcacatcc gccgattggc
     9721 tcaaccgctt cggacacagc ctgcacacca aaaccgccgt cctacaccac aaccctgaag
     9781 aagaccagcg caaactgttc agcgcaatcc gccaatttac ccgccatacg ccgctgattc
     9841 tccacatcac ctgccgcacg acagaaaccg accgtgccgt actgcacagc ctcgcccgac
     9901 actgcaactt cctcatcagt ttcaacgccg acgacctcga agccgcactg cgcgcccaac
     9961 tgtccgacct tcctcccctg tcccgactcg acatcctgtc cgacacgcct gccgaatggc
    10021 tgaacgcgca cgcgccaaaa aacctcgccc tccactttcc caaccttccc caccacatcc
    10081 gcaacggaca cctgaccggc acacccacac cctcaatctg ccacgacatc gcctcacgtc
    10141 agcttgcccg ccccgacacc caagccgtcc taaccatcct cagtccctcc ggacacgagg
    10201 attacaaaaa aacagcacgc gcccttatcc gcctgtccga acagaccgcc aaacccctgc
    10261 tcgtcagcag ccccttttca gacggcataa cacatttcga cacccccact caggcaatcc
    10321 gcaccctttc ctaccgcaac accgccgccg ccctgaaaca ggcacagctc gacattgcac
    10381 cgccgcagcc atgccgtctg aaaacaccgc aaccccaaaa catcaaaaaa gcccttgcag
    10441 cggcaaaccc ctccctgctc gccgaagccc tgcacctccc cccctaccgg cacaccaccc
    10501 ataacgccgt acaattccaa ttcgacagcc accccctcta tggcgacatc ctgaccgcac
    10561 gctgcaacgg acaaaccact gccgtactcc cgccgtttac cacgctcgac agccgccacc
    10621 ttgcccgctt tgccgaactc gacggcacac aaaccctcga ccagttcctg cacacactga
    10681 ccatcattcc cgaataccgc caacacattc tcggcatcac cctcaaccta aacggcggac
    10741 aatacagcag cgatttcatc ttaaagacac ccgaaacaca cgacacgccc aaacgcaaga
    10801 acacaggcaa agccgcccaa accctcgaac atgccgccgc aaaaatgcag agtgccgccg
    10861 catacctgaa acacaaaaac ccgacagccg ccgaatttct ccgccacaca agcgaagccg
    10921 ccgcagaact gctcggcagc aaaaccgaaa ccggagcagc cgtacccaac gtacttgccc
    10981 cctatcccgc agcatacccc aaaacactgt ccctaagaaa caacacgacc gttaccatta
    11041 cccccatttt gcccgaagac gcagaagcca aacagcagtt cgtccgcagc ctcggtcccg
    11101 aagcacggta cacacgcttc atgacccaca ccaacgaact gcccgcagcc acgttggcac
    11161 gcctgtgcaa ccccgattac cactgtgaag ccgcatggac ggcaaaggat gccgacagca
    11221 acatcgtcgc cgtcgtccgc cacagccgcc tgaatcgcaa cgaatgcgaa ttcggcatca
    11281 cactggcgga acatatgcgc ggcagcggac tggcacagaa aatgatggaa ctcatcatcc
    11341 aaaccgccgc acagcaaggc taccggacta tgagtgccga cattctcaaa accaataccc
    11401 ccatgatcaa acttgctgaa aaatcaggat ttaccctcaa ggaatcggac accgaaaaaa
    11461 acctgtaccg cgcatatctg aaccttgcgg cagacaaaac aacagaaaaa acaaataaaa
    11521 acttgcgcac cgaccacaaa ataacctaaa atcggcagtt tccatatatc cgattttctc
    11581 aaaaggactc aaaatggtag ttatccgttt ggcacgcggc ggctcgaaac accgcccctt
    11641 ctacaacgtc atcgttactg actcacgcag ccgccgcgac ggccgcttca tcgaacgcgt
    11701 aggcttctac aaccccgtag ccaacgaaaa acaagagcgc gtccgcctca atgcagaccg
    11761 cctgaaccac tggattgcac aaggcgcgca agtcagcgac tccgttgcaa aactgattaa
    11821 agaacaaaaa gccgcctaat ccgcatttgc cgccatgaca gacactcaaa accgggtagc
    11881 catgggctac atcaaaggcg tattcggcat aaaaggctgg ttgaaaattg ccgccaacac
    11941 cgaatattcc gacagccttt tggactaccc cgagtggcat ttggtcaagg acggcaaaac
    12001 catcagcgtt acccttgaag ccggaaaagt cgtcaacggc gaactccaag tcaaattcga
    12061 aggcataaac gaccgcgact tggcattctc attgcgcggt tacaccatcg aaataccccg
    12121 tgaagcattc gccccgacag aagaagacga atactactgg acagacttgg tcggcatgac
    12181 cgtcgtcaac aaagaccata ccgttttagg caaggtaagc aacctgatgg aaaccggcgc
    12241 aaacgacgta ttgatgattg acggagaaca cgggcagatt ctgattccgt tcgtttccca
    12301 atatatcgaa accgtcgata ccggcagcaa gattattact gccgactggg gtttggacta
    12361 ctgatgctta tccaggcagt taccattttc cccgaaatgt tcgacagcat tacccgctac
    12421 ggcgtaacgg gacgcgcgaa cagacaggga atctggcagt ttgaagcagt caatccccga
    12481 aagtttgccg acaacagatt gggctacatc gacgaccgcc cgttcggcgg cggcccggga
    12541 atgattatga tggctccgcc gcttcatgca gcaatagaac acgccaaagc acaatcttcc
    12601 caagctgcaa aagtcattta cctcagcccc caaggaaaac cgctgacaca cccaaaagcg
    12661 gcagaactgg cagaacttcc gcatctgatt ctgctgtgcg gacgctatga gggaatagac
    12721 gaaagactgc tgcaaaccag cgtcgatgaa gaaatcagca tcggagactt cgttgtttcc
    12781 ggcggagagc ttcccgccat gatgctgatg gatgcggtat tgaggctcgt acccggcgta
    12841 ttgggcgata tgcagtctgc cgaacaagat tcgttctcaa gcggcatttt ggactgcccc
    12901 cactacacca aacccttaga atttcaaggc atggctgttc cggaagtatt acgttccggc
    12961 aatcatggct tgatagcgga atggcggttg gaacaatcgc tgcgccgcac cttggagcgc
    13021 agacccgatc ttttggaaaa gcgcgtttta atcccaaagg aatcccgcct cttagaaacc
    13081 atccggcaag agcaacggga aatccaatca taatttagga aaaaaacaat gaacctgatt
    13141 caacagctcg agcaagaaga aattgcccgc ctgaataaag aaatccccga attcgcaccg
    13201 ggcgacaccg tagtcgtatc cgtacgcgtc gtggaaggta cccgcagccg tctgcaagcc
    13261 tacgaaggcg tggttattgc ccgtcgcaac cgtggtctga acagcaactt catcgtccgc
    13321 aaaatctcca gcggcgaagg tgttgaacgt actttccaac tgtactctcc gaccgtcgaa
    13381 aaaatcgaag tcaaacgccg tggcgacgta cgccgtgcca aactgtacta cctgcgcggc
    13441 ctgaccggta aagctgcacg catcaaagaa aaactgcctg cacgcaaagg ttgattcaaa
    13501 ccgttttccc caatgccgtc tgaaccttct gacggcattt cttattgccg caacatccgc
    13561 aacggaacag caccaagaag cacacccctt ccggcacatc ccgaatcccc gtccgaaccg
    13621 aacaaaattt acagaccaaa cgttatacag tatcatatca gccatataat aataaccgct
    13681 ttaccgcttt ccctttcaaa accgcaaatc atcatgacac cttccctttt actatcagga
    13741 ttgaccttcc gcctcgtcct tgccctgatt gccgtatccc ttttatgggg cgtttacttt
    13801 tgggcagtat ccgcatgagc atcattgtcg aaaacctgac cgtcagctac cgccgccgtc
    13861 ctgccgtaca ccacgttgac attacttttg aagaacatag tatgtgggcg gttttcggtc
    13921 ccaacggcgc agggaaatcc acctttctca aatccttgat gggattgcag cctatcgata
    13981 caggcagcat ccggctggat ggattgagcc gccaagacat cgcctacctt ccccagcagt
    14041 ccgatatcga ccgctcccaa cctatgactg ttttcgactt ggcggcaatg gggctttggt
    14101 atgaaatcgg ctttttcaaa gggataaata ccgctcaaaa acaacgcgtt cacgaagcct
    14161 tggagcgtgt aggaatgcgg cagtttgcac gccgccaaat cgcccacctc tcaaacggac
    14221 aattccaacg cgtccttttt gcccgaatgc tggttcaaaa tgcaaaattc ctgcttttgg
    14281 acgaaccttt caacgccgtt gatgcacgga cgacctacga acttctcgac gtattgcaga
    14341 aatgccattg cggcggacac gctatcattg ccgtactgca cgattacgaa caagtccgtg
    14401 cctactttcc cagtaccctg ctgctcgccc gagaaaaaat tgcggcaggc gcaaccgaga
    14461 ccattctgac agaaccctac ctcgcccaag ccaacgccaa aatgcagcaa caggaaagcc
    14521 ccgactggtg cgcctcataa atactgcccg aaaccacgcc ccacaccaga caccatgaat
    14581 ctctacgacc tgctccttgc cccctttgca gaattcgact ttatgcgcta cgccctcgca
    14641 tccgtcttct gcctgtccct cagtgccgca cccgtcggcg tattcctcgt catgcgccgt
    14701 atgagcctga taggcgacgc attgagccac gccgtcctgc ccggtgccgc cgtcggctac
    14761 atgtttgccg gcttgagcct gcccgccatg ggtttgggcg gcgtagccgc aggcatgctg
    14821 atggcactgc ttgccggact cgtcagccgc ttcaccaccc tgaaagaaga tgccaacttt
    14881 gctgcctttt atctcagcag cctcgccatc ggcgtagtcc tcgtcagcaa aaacgggagc
    14941 agcgtcgatt tgctccacct ccttttcggc tctgtacttg ccgtcgatat tcctgccctg
    15001 cagctcatcg ccgccgtctc cagcctcacg ctcattaccc ttgccgtcat ctaccgcccg
    15061 ctcgtactcg aaagcatcga ccccctgttt ctcaaatccg tcggcggcaa aggcgggctt
    15121 tggcacgtcc tctttctcgt cctggtcgtc atgaacctcg tatccggctt tcaagccctc
    15181 ggcacactca tgtccgtcgg actcatgatg ctgccagcca ttaccgcccg cctgtgggcg
    15241 aagcacatgg gcgcactcat cctcctatcc gttctgacag ccctgctgtg cggcttgagc
    15301 ggactgctca tttcctacca catcgaaatt ccctccggtc ccgccatcat cctctgttgc
    15361 agcgtccttt atctcttttc cgtcatactc ggcaaagaag gcggcattct gaccaaatgg
    15421 ctcaaaaacc accgccacca caccacctga ccccgcaagc cgcttgaaca aacaggcagc
    15481 ttgttttacc ataacagatg ttacgttata tcacaggaga acagttatga aacacctcaa
    15541 actcaccctt attgccgcat tgctaaccac cgccgcaact gccgcccccc tgcccgtcgt
    15601 aaccagcttc agcattttag gcgacgttgc caagcaaatc ggcggagagc gcgtatccat
    15661 acaaagtttg gtcggagcca accaagatac tcatgcctat cacatgacca gtagcgacat
    15721 taaaaaaatc cgcagtgcaa aactcgtcct gctcaacggc ttaggacttg aagctgccga
    15781 tgtacaacgt gccgtcaaac agagcaaagt atcctatgcc gaagcgacca aaggcatcca
    15841 acccctcaaa gccgaagaag aaggcggaca ccatcatgac cacgaccatg accacgaagg
    15901 acaccaccat gaccacggcg aatttgaccc gcacgtctgg aacgaccccg tccttatgtc
    15961 cgcctatgcc caaaacgtcg ccgaagccct gataaaggcc gaccccgaag gcaaagttta
    16021 ttatcaacaa cgcttgggca actaccaaat gcagcttaaa aaactgcaca gcgacgcaca
    16081 agccgcattt aacgccgtcc ctgccgccaa acgcaaagtc ctgaccgggc acgatgcctt
    16141 ttcctacatg ggcaaacgtt accatattga attcatcgcc ccgcaaggtg tgagcagcga
    16201 agccgagcct tcagccaaac aagtcgccgc catcatccga caaatcaaac gcgaaggcat
    16261 caaagccgtc tttaccgaaa acatcaagga cacccgtatg gttgaccgta tcgccaaaga
    16321 aaccggtgtc aacgtcagcg gcaaactgta ttccgacgca ctcggcaacg cgcccgcaga
    16381 cacctacatc ggcatgtacc gccacaacat caaagccttg atcaacgcga tgaagcaata
    16441 aaaccgtttg attggtttga atttgaaaag gcaaaaggcc gtctgaaaat tatagtggat
    16501 taacaaaaat caggacaagg cgacgaagcc gcagacagta cagatagtac ggtaaggcga
    16561 ggcaacgctg tactggtttt tgtgaatcca ctatattgct agaagtgcac cgattaaggt
    16621 taattaaaat acgaccctta tcccaatatt aagaaaaaca gcaatcaaaa taaacttgat
    16681 tgctgttttt cagtttaagc catgaatgtg attaggctcc ttatgcagat ggcgttacca
    16741 ataacggctg ctgtacggat tgtgtattgg catccacatt tcctcctgtc gcagcagtat
    16801 tagaaccgaa cacagacata gactgtacca aattattgcc agcattaata tacttggcaa
    16861 aatctggatt actgatagct gcatcatcaa agacaaatgt atctacacga tggttttcac
    16921 catagaagaa tccggaaata cgtacgttgt cttgttcaga agcgctaagc accaaatcac
    16981 ttccggaacg gataaaatga acatctgctg ctttaaatcc tttaaagtgc atagtgtcag
    17041 agtttttatc cacatggtaa ttatagaccg tatcctgacc gaagcctttg ccgaagacat
    17101 aagtatccga accgctgccg ccctccaagt aatcattgcc tgcaccgccg attagagtgt
    17161 cgttaccgtc ttcgccgttc aaatgatcat tgccttcgcc accattcagt acatcgttac
    17221 cattatagcc gtacagggcg tcgttgcctt ctcctccatt gagcgtatca ttgccattgc
    17281 cactgtagat actgtcgttg cctgcatcac cattcagcag gtcatccccg tcggcaccgt
    17341 acagatagtc atcgcccaat ccgccattta aggtatttcc ggattggtag gcatacaatc
    17401 tgtccgaacc gtcggtggat tgctgtacca gtt
//
LOCUS       DBBZYD010000038        17326 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.038, whole genome shotgun sequence.
ACCESSION   DBBZYD010000038 DBBZYD010000000
VERSION     DBBZYD010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17326
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.038"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(69..2045)
                     /locus_tag="ACJJDL_001046"
     CDS             complement(69..2045)
                     /locus_tag="ACJJDL_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HGG7573772.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLKGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="ACJJDL_001047"
     CDS             2194..3033
                     /locus_tag="ACJJDL_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HGG7573773.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALAQIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3234..4265
                     /gene="gap"
                     /locus_tag="ACJJDL_001048"
     CDS             3234..4265
                     /gene="gap"
                     /locus_tag="ACJJDL_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG7573774.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKDKLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(4519..5244)
                     /gene="aat"
                     /locus_tag="ACJJDL_001049"
     CDS             complement(4519..5244)
                     /gene="aat"
                     /locus_tag="ACJJDL_001049"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HGG7573775.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSGDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDESGETRLAGGFYGVQIGSV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(5314..5748)
                     /gene="fur"
                     /locus_tag="ACJJDL_001050"
     CDS             complement(5314..5748)
                     /gene="fur"
                     /locus_tag="ACJJDL_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HGG7573776.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            5967..6344
                     /locus_tag="ACJJDL_001051"
     CDS             5967..6344
                     /locus_tag="ACJJDL_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HGG7573777.1"
                     /translation="MNKTLILALSALLGLAACSVERVSLFPSYKLKIIQGNELEPRAV
                     ASLRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKDRSNLTVYFENGVLV
                     RTEGNALQNAAEALRVKQNADKQ"
     gene            6354..7163
                     /gene="dapB"
                     /locus_tag="ACJJDL_001052"
     CDS             6354..7163
                     /gene="dapB"
                     /locus_tag="ACJJDL_001052"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HGG7573778.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(7427..7837)
                     /locus_tag="ACJJDL_001053"
     CDS             complement(7427..7837)
                     /locus_tag="ACJJDL_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573779.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPMPNYSEWVKIKFKQFSYLKFIYGYATKNQDKNIKNVLELGELKQDDEILDYGGA
                     LEVIGGRYDLPTGFSIDIVCREIELEFLDQESFN"
     gene            complement(7839..8084)
                     /locus_tag="ACJJDL_001054"
     CDS             complement(7839..8084)
                     /locus_tag="ACJJDL_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573780.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGLLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(8092..9264)
                     /gene="lpxB"
                     /locus_tag="ACJJDL_001055"
     CDS             complement(8092..9264)
                     /gene="lpxB"
                     /locus_tag="ACJJDL_001055"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HGG7573781.1"
                     /translation="MWGQTNMADKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     VGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRSGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAACFLLPAATEATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQSEAKPEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(9312..10304)
                     /locus_tag="ACJJDL_001056"
     CDS             complement(9312..10304)
                     /locus_tag="ACJJDL_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG7573782.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            10799..13555
                     /locus_tag="ACJJDL_001057"
     CDS             10799..13555
                     /locus_tag="ACJJDL_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HGG7573783.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRNE
                     RGQTALETAAVAETAVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPLI
                     ATPVQTASSAVSNGDALVYDAAEKIRRAAAILPEGATPKASAQEMPSETATFTAAAEQ
                     ARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEAATVPAEEMIQVE
                     TRQG"
     gene            complement(14598..15590)
                     /gene="pdxA"
                     /locus_tag="ACJJDL_001058"
     CDS             complement(14598..15590)
                     /gene="pdxA"
                     /locus_tag="ACJJDL_001058"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HGG7573784.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAPGEGELEVLHIPTAEAVAAGRLNPANAAYVLQLLDTA
                     LAGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLR
                     VALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGESGH
                     LGHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKY
                     HSFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            15750..17177
                     /locus_tag="ACJJDL_001059"
     CDS             15750..17177
                     /locus_tag="ACJJDL_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7573785.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
BASE COUNT         4216 a         5440 c         4177 g         3493 t
ORIGIN      
        1 tgcgatttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgcctttc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg acggacggtt
      301 tcgccgtttt cgccgaatcc tgcctcatca tcactaccga caaacagtcc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccgata cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg tcagcaccac cattttcgcc cgtcccagac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagaaccgcc
      961 gctgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccctgcgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccaa ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatgc cggcaacgaa tgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacgggacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaacac cagccgcctc
     1801 attgccctca gcttgggcag cgaaaactcc aagcctatac tgaacatcag gaacacaatc
     1861 ccgatttcgc ccaaataatc cgttgcatga cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcataggtc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgtattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc agatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg tgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgtgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat atctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ctgatatgcc gtctgaaaac
     3061 cgtttcagac ggcattttat caagctctcc gtccgccgca cccgtgccgt ccgcatctta
     3121 ccgcccaccc ttccggccgc gccgttttca ataaaatatt aattacacgc cactacaaat
     3181 ttgctataat ccgccccgaa aatctaccca acccctcaac aaaggaacaa accatgggca
     3241 tcaaagtcgc catcaacggc tacggacgca tcggccgcca ggttttgcgc gccatctacg
     3301 attatcagat tcaagaccaa ctccaaatcg tcgccgtcaa cgccagcggc agccttgaaa
     3361 ccaacgccca cctcaccaaa ttcgacaccg tgcacggacg ctttgaagcc gacgtatccc
     3421 acgacggcgg caacctcatc gtcaacggcg acaaaatccc cttcttctcg acccgcaacc
     3481 ctgccgaact gccgtggaaa gaactcggtg tcgatttggt catggaatgc accggcgcgt
     3541 tcaccagcaa agaaaaagcc aaagttcatc tggaaagcgg cgcgaaaaaa gtcctcattt
     3601 ccgcaccggg cggcgacgat gtcgatgcaa ccgtcgtgta cggcgtgaac gacagcatcc
     3661 tgaccgccga catgaccgtc gtttccaacg cttcctgcac caccaactgc ctctcgccgg
     3721 ttgccaaagt gttgagcgaa agcgtcggca tcgtcaaagg cgcgatgacc accatccacg
     3781 cgctgaccaa cgaccaaacc gttaccgacg tgcgccacaa agacctgcgc cgcgcccgca
     3841 gcggcgtgga aaacatgatt ccgaccaaaa ctggcgcggc aaaagccgtc ggactggtac
     3901 tgcccgaatt gaaagacaaa ctcgacgggc ttgccatccg cgtgccgacc gtcaacgtat
     3961 cattggtaga tttgaacttc caagccgcgc gcgacacgac aatcgaagaa atcaacgcac
     4021 tgatgaaagc cgcctcggaa gcaggcgcgc tcaaaggcgt tttaggctac aacaccctgc
     4081 ccttggtttc catggacttc aaccacacca ccgaagccag ccacttcgac gcaacactga
     4141 ccaaagtcgt tgacggcaac atgattaaag tcttcgcatg gtatgacaac gaatggggct
     4201 tcagctgcca aatgctgaac accgcacgcc gtatgttcgg acttgaagtg cgcccgctca
     4261 aataagcaat aaaccgtcaa acaaaatgcc gtctgaaacc cgatgttttc aagttccaga
     4321 cggcattttt catttttggc agtgattttg cccggctgtc gtcatttcta attttatagt
     4381 ggattaacaa aaaccagtac ggcgttgcct cgccttgccg tactatttgt actgtctgcg
     4441 gcttcgtcgc cttgtcctga tttttgttaa tccactataa tccaccatat ttgaacctga
     4501 ccgaagcata agccgccatc aaagcccctt gcacgccact tcgcgccgcc cgatttcctc
     4561 tttcaacggc acggcgttca acatccgcag acgttcggca aaatccgcaa acggcagcag
     4621 ctccgaaccg aaacggcgca tatgttccgt gtcctgctgg cagtctatca gttccacacc
     4681 caaatccgcc aaaaacggca cggcgcaggc aaacgcgatt ttcgacgcat ccggttgcaa
     4741 cgcaaacatc gattcgccat aaaacacgct gccgatctgc acgccgtaaa agccgcccgc
     4801 caacctcgtt tcaccgcttt catcgggata atggcactcg aaagaatgcg cgtgtcccat
     4861 ttcgtgcagc ttcaaatatg ccgtctgaaa ctcgggcgca atccaagttc cgtcctgatt
     4921 cgggcgcgcc gctgccgcac aatgcgcgac cacttccgca aaacagccgt tgaccgcaac
     4981 ccgatagctg ccgttgcgca gcgttttcgc cagcgagcgc ggaacgtgca gacgttcggg
     5041 aacaatcacc gcacgcgggc cgaccgcata ccaaaaaaac caaccgtccc gagaaaacca
     5101 cggaaacacg ccgttccgat acgcctcgag cagccgcccc gcatccaaat cgccgctcac
     5161 gccgaccagc ccgtcgcacc gggccaaagc ataggcagga tcgggaaagg cataattgtc
     5221 aggggcaagc agcggaatac gcatggcagt tctccaaaaa cacagacggc atccaaaatc
     5281 atgaatgccg tctgaacaac aaaccgtccg gatttaacgt ttgcccttgg cctgacagtc
     5341 gctgcacacg ccgtacatat aaagcgcgtg atcgacgatg cggtagccgt tttcctcagc
     5401 gattttgtct tgcagggctt cgatttcggg attgtggaat tccgttacct cgccgcactt
     5461 cacgcagacg atatggtcgt ggtggtcgcc cttgtccaac tcataaaccg ccttgcccgt
     5521 ttcaaaatgg tggcgttgca gaatgcccgc ctgctcaaac tgggtcagca cgcggtaaat
     5581 cgtcgccaca ccgatttcca caccctcttc caacaaaatg cggtacacat cttccgcact
     5641 caaatgctct tccgcatgcg tctcgaacaa atccaaaatc ttcaaacgcg ggccggtaac
     5701 cttcagaccg ctgtctttca gttgtgcaat attgttgaat ttttccataa tattcaatac
     5761 ccctgtaaaa caatagacgt tataatacgc aatttcggcc tgtttgccca ctatcgcacc
     5821 atagcagttt gcaatagtaa aaccgcaccg gcggccgatg cgcggacagg gcggataccg
     5881 cttaatcgta tgattatcgt tcgcttttat aaaatattca agcagtgtta cactacccat
     5941 cccgatttgc acagaaaggc atttccgtga acaaaaccct catcctcgcc ctttccgccc
     6001 tcctcggcct tgccgcgtgc agcgtcgaac gcgtttcact gttcccctcg tacaaactca
     6061 aaatcataca gggcaacgaa ctcgaacctc gcgccgtcgc ctccctccgc cccggtatga
     6121 ccaaagacca agtcctgctc ctgctcggca gccccatact gcgcgacgca ttccataccg
     6181 accgctggga ctataccttc aacacctccc gcaacggcat catcaaagac cgaagcaatc
     6241 tgaccgtcta ttttgaaaac ggcgtgctcg tccgcaccga aggcaacgcc ctgcaaaatg
     6301 ccgccgaagc cctccgcgta aaacaaaacg cagacaaaca ataaggaaca cacatgacac
     6361 cgctcaaaat cgccatcgcc ggcgcaaacg gccgtatggg gcgcgtcctc gtcgaagccg
     6421 tcaacaacca tcccgacacc gtcctttccg gtgcgcttga acactcaggc tcagaagccc
     6481 tcgggctgga cgcaggctac gccgtcggac tcaaaaccgg catcgccatt tcagacgacg
     6541 ttgacgccgt tctcgcacaa agcgacgtac tcatcgactt cacccgcccc gagcccaccc
     6601 tcaaacacct gcaaaaatgc gttgaaaaac aagtcaacat catcatcggc acaacaggct
     6661 tcgacgatgc gggcaaagcc gctatccaca ctgccgccga acaaacaggc atcgttttcg
     6721 ccgccaactt cagcgtcggc gtcaacctca ccttccacat cctcgacacc gtcgcccgcg
     6781 tgttaaacga aggctacgac atcgaaatca ttgaaggcca ccaccgccac aaagtcgatg
     6841 cccccagcgg caccgcgtta cgcatgggcg aagtcatcgc cggcgcgctc ggcagagacc
     6901 tcaaacaatg cgccgtttac ggccgcgaag gccacaccgg tccgcgcgat ccgtcgacca
     6961 tcggctttgc caccgtccgc gcaggcgaca tcgtcggcga ccacaccgcc ctcttcgcca
     7021 ccgacggcga gcgcgtggaa atcacccaca aagccggcag ccgcatgacc tttgccgccg
     7081 gcgccgtccg cgccgcagtt tgggtaaacg gcaaaacggg tttgtacgat atgcaggacg
     7141 tactcgggct gaacaaccgt taacccccat acaaaatgcc gtctgaaaag atattgttca
     7201 gacggcattt tgccgacagg ctccgtatcg gcatatcaat gtttcaacac acgggacgat
     7261 acataaagcg tcgccctatg tgtcgtcctg atttggaagg gattacgccc ctcccaaata
     7321 aagtctgatt ctaccgcccc gaaggacaga tgtccgagtg gcggggtttc aaccgaaaag
     7381 gaaatacgat aaagttgctt gcgcggcatg acaagttacg gctcgtttaa ttaaaactct
     7441 cctgatctaa aaattctaac tctatttccc ggcaaactat atctatacta aaaccggtcg
     7501 gaagatcata cctaccgcct atcacttcca gcgcacctcc ataatccaag atttcatcat
     7561 cctgctttaa ttctccaagt tccaatacat ttttgatatt tttatcttgg ttcttcgtgg
     7621 cgtatccata gataaatttc agatagctga actgcttgaa tttaattttt acccattctg
     7681 aataattggg catagggatc tcttgaggaa agtccggata atccacattc tggacgatga
     7741 tatggaattc atcgtttttc aaagtatagt ttaatagagt gccctcatat atatacagaa
     7801 attgataatc tttttttgga atggtataag ttgtcatatt attttacctt ttcaaaaaca
     7861 atgagtttaa gattttttga gtccaagttg gttctactac tcttatgaaa tttcagttgt
     7921 ttaaactctt cctttaacag accattatat tttaacctta atcccactcg agccagttct
     7981 gcttcatttg gaattcctct taaatactta ttgtttgatg tgccattaat cacaatttct
     8041 cccccttttt ttgtaatacg tgctgcttcg ggaaaataat ccattaaccg ctcaacatcc
     8101 cgcctcttcc aaaaccgcgc gcgcggccaa atccgccgta tcttttttca acagcaggtg
     8161 caacgccctg aaatcctgtt gcagcgcggc aaccttatcg gggtgttcgt accagtccgc
     8221 caacgccgcc gccagttttt ccggttttgc ttcagattgc aataattccg gcacagcctc
     8281 cttacccaac aggatattcg gcaggccgac atgcggcact ttgattttgc gtttcacata
     8341 agcataagtc agcggcgaaa tcttgtagct gatgaccatc ggacgcttgc acaacgccac
     8401 ctccaaagtc gccgtaccgc tcgttaccag caccgcatcc gccgccctgc acactgtttc
     8461 agactgtctg tcgattaccg tcagcggcaa tccggcaaac tccggccgct gcaaaacttc
     8521 cgccaaacgc cgcttcgtcg cctccgttgc ggcaggcagc aggaagcatg cggcaggata
     8581 gcgttccaac aacaataatg ccgtctgaaa aaacaccggc gccatatagt cgatttcgct
     8641 gacgcggctg ccgggcagca gggcgaatac ggggatgccg gcatccacgc ccaaagtttg
     8701 ccgcgccgtt tcacggtcgt cttccaaggg cataagctgc gccatcggat gaccgacaaa
     8761 ctccgcacgt ccgcccgcat cgagataaag ctgcggctcc atcgggaaca ggcacaacac
     8821 gcggttgacc tgatgcacga ttttgcccac acgttcccgc cgccacgccc acaccgacgg
     8881 gctgacataa tgcacggtcg gaatccccga ccgtttcagc ttttccgcca cacccaaatt
     8941 aaaatcgggc gcatcgatac cgacaaagac atcaggtttc aacgacagca aatcccgtac
     9001 cagccccctg cgtatccgta aaatttccgg cagccgcctg accacttcga caaagccgcg
     9061 caccgccagc cgctcctgat cataaaggct ctcgaaacct tccgccttca tcagttcgcc
     9121 gccgataccg acaaaacgcg cctgcggaca acgcttgcgg atggcgcgta tcaggtgcgc
     9181 ccccaatagg tcgcccgacg cttcgccgac actgacggca atcaaagggc tttttttatc
     9241 agccatattc gtctgtcccc acatactttc acgtcccgat gccgtctgaa ggcttcagac
     9301 ggcatcgggg ttcacatttt cgtcccgttt tccaacatca ccgcaaactg cgccaagtcc
     9361 ggcggcagct ccgccttcaa caccagcggc tcgcccgtga gcggatggtt caagtgcagc
     9421 tcggacgcgt gcaaaaacat ccgcttcaaa cccaacttct gcaaacgacg gttcgcctga
     9481 taatcgccgt agcgttcgtc gcccgcaatc ggacagcctt gagattgcag gtggacgcgg
     9541 atttggtgcg tacgacccgt tttcagcgtt gcccgcacca aagtcaggtg cgacagcccg
     9601 acaccgtgca aaatgccgtc tgaaaaacgg cttaacacac ggaacaccgt gtgcgccgac
     9661 tgcccgtcct cgctgacgcg taccatcttt tcgccttgtg cgccggtata tttgaacagg
     9721 ggcagtttga catggaaatt gtcgtccggc agtttgccca cccccagcgc aaggtagatt
     9781 tttttggggt ggtcgttacg gatggcttcg tgaagtttga cgagcgcgct gcgtttcttc
     9841 gccaccatca acaagccgct cgtatccttg tccaaacgat gaaccaactc caaatacttc
     9901 gcctccggac gggcgcggcg caactgttcg ataacgccga aactcacgcc gctgccgccg
     9961 tggacggcaa cgccggacgg tttgtcgatg accaaaagcg catcgtcttc gtaaacaacg
    10021 tcaaacgcac gcgccggtac ggcggcacgc ctttcagacg gcatttcctt ctccgccacg
    10081 cgcacaggcg gaatccgcac cgtatccccc tccgcaatac ggctgtcggg tttgcagcgt
    10141 ttcttgttca accgcacctc gccggcgcgg ataatgcggt ggatatggct cttgggaaca
    10201 cccttgagga tttttatcag atagttatca aggcgttgac ccgcctcatg ttcggcaacc
    10261 cctatcaagc tgaccgaatc tttgcttatt tcgtgcgttt tcatctataa tccgaacatc
    10321 cgtttcagca aaaagcgcgc ccgccgcgcc cccctgaaac ggtttacttt aaaacggaat
    10381 tttatattaa aaacgcactc cgcaaagcat tttccctgcg cctgttccca gccggcaggc
    10441 gcagaacgta atcaagtttg aattgatttt gccgtttcgg cgcggaagtt aagacggcag
    10501 ccgggcccca agtcccaaac gcaaaccgcc caaaacacag gcatcacgat aacaagaaga
    10561 agccggcccc catttttccg accgcagcgt tcggaacgcg gcagacaaac cgccgcatcg
    10621 atctttatag ccttctgtat ccgacccttc cgcacacggt tctccggaac gtgcatccct
    10681 gcggattttc aactcaaaaa ctgattaccg gttttatccg aagacatcgg aaaacccagc
    10741 cttacggaat gccgaaccgg accggcgcgc ccgaatgccg cccgtccacg aggtgatcat
    10801 gaaaagaatg ttattcaacg caacgcaggc cgaagagcta cgcgttgcca tcgtcgacgg
    10861 acaaaacctg ctggatttgg acatcgaaac gctgggcaaa gaacagcgca aaggcaatat
    10921 ctacaaaggc atcattaccc gcatcgagcc gtcgctggaa gcgtgtttcg tcgattacgg
    10981 aaccgaccgc cacggctttt tgccgtttaa agaagtctcc cgctcatact tccaagacta
    11041 cgaaggcgga cgcgcgcgca tccaagacgt gctcaaagaa ggcatggaag tcatcgtcca
    11101 agtcgaaaaa gacgagcgcg gcaacaaagg cgcggcactg accaccttca tcagcctcgc
    11161 cggacgctat ctggtattga tgccgaacaa cccgcgcggc ggcggcgtat cccgccgtat
    11221 cgaaggcgaa gagcgtcaag aactcaaagc cgccatggcg gaactcgaca ttccaaacgg
    11281 catgagcatt attgcccgca ccgcaggcat cggccgcagc gcggaagagt tggaatggga
    11341 tttgaactac ctcaaacaac tctggcaggc gattgaagaa gcaggaaagg cgcatcatga
    11401 cccctacctg ctctttatgg aaagctcgct gctcatccgc gccatccgcg actatttccg
    11461 ccccgacatc ggcgagattt tggtggacaa tcaagaagtt tacgaccaag ttgccgagtt
    11521 catgagctac gtcatgccgg gcaatatagg ccgtctgaaa ctctacgaag accacacgcc
    11581 gctgttttcc cgcttccaaa tcgaacatca aatcgaaagc gcgttttcgc gcagcgtcag
    11641 cctgccttcc ggcggcgcga tcgtgatcga ccacaccgaa gccctcgttt ccatcgacgt
    11701 gaactccgca cgcgccacac gcggcgcgga catcgaagac accgcgttca aaaccaatat
    11761 ggaagccgcc gaagaagtcg cccgacaaat gcgcctgcgc gacttgggcg gtttggtcgt
    11821 catcgacttc atcgatatgg aaaaccccaa acaccagcgc gatgtggaaa acgtcctgcg
    11881 cgacgcgctc aaaaaagacc gcgcccgcgt gcagatgggc aaactgtccc gtttcggact
    11941 tttagaattg agccgccaac gtttgaaacc ggctttgggc gaaagcagcc atgttgcgtg
    12001 tccgcgctgt gccggcaccg gcgtgattcg gggcatcgaa tccaccgccc tgcacgtttt
    12061 gcgcatcatt caagaagaag caatgaaaga caacaccggc gaagtgcgcg cacaagtgcc
    12121 cgtcgatgtc gccaccttcc tgctgaacga aaaacgcgcc gagctgtttg cgatggaaga
    12181 gcgtttggat gtcaacgtcg tcctgattcc gaacatccac ctcgaaaatc cgcactacga
    12241 aatcaaccgc atccgcaccg acgacgtaga agaagacggc gaaccgagct acaagcgcgt
    12301 tgccgagcca gaagaagacg aatccgccaa accgttcggc ggcgaaaaag ccaaagccgc
    12361 ccgtcccgaa cccgccgtca aaggcgtgcg ccacaccagc cccgccccga ctgccgcccc
    12421 cgagaaaaaa acctcctggt gggacagctt caaagcttgg ctcaaacgca ttttcggcgg
    12481 cagcgaaacc caagccgcgc ccgctgccga aacctccgaa aaacgcagca cggcaaaccg
    12541 cagcggcagc cgcgccaaca accgccgcca aaacccgcgc cgcagcaaac gcgaaggcag
    12601 caaagtagaa gtccgcgaag tggcaggcaa aactgccgga caggaagcgc gtgccgacaa
    12661 agccgaaacg cgcaacaacg gcaaccgccg ccgcaacgaa cgcggcgacc gtgccgccga
    12721 acgcgccaac gaagcggaaa tccaagaccg caacatacag cctgccgcaa ccgttgcaga
    12781 tgccgcaccg tccgaaaccg aagtgcaaac cggcaaacgc cgccgcaacg gcagccgcaa
    12841 cgaacgcggc caaaccgcgc tggaaaccgc cgccgttgcc gaaacagccg ttcagacagc
    12901 ggaaaacacg ccgtccgaac cgcataccgc agaagacaaa ggcagcaagc ccaaatccga
    12961 acgcaaccgc cgcgaacgcg acagccgcga cgccaaagaa cgccgcgagc gcaacaatca
    13021 gcgcgaccgc cgtcaaaacg gcaaaaaacg caatatcccg tctgccgcca aaatcgagca
    13081 gtacctgaat attcacgaca ctgccgacaa agtccgttcc gccgccgcac acgttttcgg
    13141 agaaaccgac gcaaacgcgc cgattaccgt cagcattgcc gatccgctca tcgccacacc
    13201 cgttcagacg gcatcttccg ccgtttcaaa cggcgacgca ctggtttatg atgcggcaga
    13261 aaaaatccgc cgtgccgccg ccatcctgcc cgaaggcgcg acaccgaaag cctcagcaca
    13321 ggaaatgccg tctgaaaccg caacctttac ggctgcggcg gaacaggcac gggaaaccgc
    13381 acaaaccggc ggactcgtcc tgatcgaaac cgaccctgcc gcattgaaag catgggcggc
    13441 acaacccgaa gtccaaaccg gacgcggttt gcgccgttcc gaacagccca agccgtctga
    13501 agccgcaacc gtccctgccg aagaaatgat ccaagtcgaa acccggcaag gctgaaccga
    13561 cggcggcaaa aagaggttct gttccgcaga acctcttttt tatatagatt cggatacctg
    13621 caatgccgtc tgaaacttcg ccattcccgt gattaccgaa acattccgcc attcccatga
    13681 ttcccgcaac attccgtcat tcccgtgaaa acgggaatct agaacctcaa actttcagat
    13741 aacctttgaa tattgccgcc gcccgaaggc ctggattccc gcctgcgcgg gaatgacggt
    13801 ttagaagttg cccgaaacct caaaaaaaaa ccgaaaccga acaagccgga ttcccgcaac
    13861 attccgtcat tcccgtgaaa acgggaatct agaacctcaa actttcagat aatctttgaa
    13921 tattgctgcc gcccgaaggt ctggattccc gcaacattcc gtcattcccg tgaaaacggg
    13981 aatctagaac ctcaaacttt cggataatct ttgaatattg ccgtcgccca aaggcctgga
    14041 ttcccgcctg cgcgggaatg acggcggagg gtggacgatg ccgtctgaaa ctgcgccatt
    14101 cccatgatta ccgcaacctt tcgtcattcc cgccaccttt cgtcattccc gtgaaaacgg
    14161 gaatctagaa cctcaaactt tcagataatc tttgaatatt gccgccgccc aaaggtctgg
    14221 attcccgcaa cattccgtca ttcccgtgaa aacgggaatc tagaacctct aaactttcag
    14281 ataatctttg aatattgccg tcgcccaaag gcctggattc ccgcctgcgc gggaatgacg
    14341 gtttagaagt tgcccgaaac ctcaaaaaaa accgaaaccg aacaagccgg attcccgcaa
    14401 cctttcgtca ttcccgtgaa aacgggaatc tagaacctca aactttcaga taatctttga
    14461 atattgccgt cgcccgaagg tctggattcc cgcctgcgcg ggaatgacga tttggaaatt
    14521 acccgaaacc caaaaacaac tgaaaccgaa cagaccggat tcccgcctgc gcggaaatga
    14581 cgggtctttt atcatcttta aaggctgccg cgcgccatct cgacggcggt ctccacggca
    14641 gttatcaggc tgccggaatc cgccctgccg gttgccgcca aatcgagcgc ggtgccgtga
    14701 tcgacggagg tgcggataaa gggcagcccc agcgtgatgt tcacgccctg tccgaagctg
    14761 tggtatttca acacgggcag cccttggtcg tggtacatcg ccaatacggc atccgcacct
    14821 tcgagcataa acggttggaa caaggtatcc gccggatacg ggccggcgag gtttatccct
    14881 tcgcggcgca ggttttccaa tgcggggata atggtgtcgg tttcttcgtg tccgaggtgt
    14941 ccgctctcgc cggcgtgggg gttgagtccg gcgactagga ttttgggatt tttgatgccg
    15001 aatttgtgtt ttaagtcgtg atgcaaaatg cgtgcgacgc tttcaatcag cggttgcgtg
    15061 atggcggcgg caacgtcttt cagcggcagg tgggtcgtta cgagggcgac gcgcaggcct
    15121 ttgccggcaa gcatcatcac aacctgcccc gtgccgcttt tttccgctag atattcggtg
    15181 tgcccgctga aaaaacctgt gcttgcgcgc gcgtcgttga tgatgccttt gtgcagcggc
    15241 gcggtaacga tgccgtcgaa aatgccgtct gaaatgcctg cgagcgcggt gtccaaaagt
    15301 tgcagcacat aggcggcgtt ggcgggattg agccgccctg ccgcaaccgc ttcggcggtc
    15361 ggaatgtgca gcacttccag ctcgccttct ccgggtgcgc cgcctgattc cggatcgaag
    15421 tcgcgcaaga cgacgctttt gcccaaggct tcggcgcgcg cgcgcaatag gtttttgtcg
    15481 cccaataccg cgcagcggca gggcaggcgt gcaaacgcca agtccaaaca aatatcgggg
    15541 ccgatgccgg caggctcgcc ggaagtaacg gcaaaaacag gctgtttcat cgtgtttgct
    15601 ccaaacaaaa tgcgattcta acgccgcagc cgcgcggcga tgtaaatttt tctgattttg
    15661 ttgacaatct gctagaatgg gcgtttacaa aatttaaacc ctgcttgcat accgccaata
    15721 tgtgcgagtt tcaactttaa ggaagcgata tgaacgagaa ctttaccgaa tggctgcacg
    15781 gctgggtcgg cgccatcaac gatccgatgt ggtcatactt ggtttatatg cttttgggta
    15841 cggggctttt cttcaccgta accacgggct ttgtccaatt ccgcctgttc gggcgcagca
    15901 tcaaagaaat gctcggcggc cgcaaacagg gggacgaccc tcacggcatc acgccgtttc
    15961 aggcatttgt aaccggcctt gccagccgcg tgggcgtggg caatatcgcg ggcgtggcca
    16021 tcgccatcaa agtcggcgga ccgggcgcgg tgttttggat gtgggtaacc gccttaatcg
    16081 gtatgagttc ggcgtttgtc gaatcttcgc tggcgcagct ctttaaagtc cgcgactacg
    16141 acaaccacca tttccggggc ggccctgcct actacatcac tcaagggctg gggcagaaat
    16201 ggctgggcgt gttgttcgcc ctgagcctga ttttctgttt cggctttgtg tttgaagcgg
    16261 ttcagaccaa taccattgcc gataccgtca aagcggcgtg gggttgggag cctcattatg
    16321 tcggcgtcgc cctggtgatt ttaaccgcgc cgattatctt cggcggcatc aggcgcatat
    16381 ctaaagcggc ggaaatcgtc gtccccctga tggcggtttt gtacctcttt atcgcgcttt
    16441 tcatcatttt gaccaatatt ccgatgattc cggacgtgtt cggtcagatt ttttcgggcg
    16501 cgttcaaatt cgacgcggca gcaggcggct tactcggcgg tctgatttcg caaacgatga
    16561 tgatgggcat caaacgcggc ctgtattcca acgaggcggg tatgggttcc gcgccgaacg
    16621 ccgccgccgc cgccgaagtg aaacaccctg tttcgcaagg tatgattcaa atgctgggcg
    16681 tgtttgtcga taccatcatc gtttgttctt gcaccgcctt catcatcttg atttaccaac
    16741 agccttacgg cgatttgagc ggtgcggcgc tgacgcaggc ggcgattgtc agccaagtgg
    16801 ggcaatgggg cgcgggcttc ctcgccgtca tcctgtttat gtttgccttt tccaccgtta
    16861 tcggcaacta tgcctatgcc gagtccaacg tccaattcat caaaagccat tggctgatta
    16921 ccgccgtttt ccgtatgctg gttttggcgt gggtctattt cggcgcggtt gccaatgtgc
    16981 ctttggtctg ggatatggcg gatatggcga tgggcattat ggcgtggatc aaccttgtcg
    17041 ccatcctgct gctctcgccc ttggcgttta tgctgctgcg cgattacacc gccaagctga
    17101 aaatgggcaa agaccccgag ttcaaacttt ccgaacatcc gggcctgaaa cgccgtatca
    17161 aatccgacgt ttggtaaatc ccgcccttac cagagccgct tccccgcgaa gcggcttttc
    17221 cctttccgca cactgtaaaa acagggcgaa caagcgtaca atcccaaccc tttacttttg
    17281 aatccatttc gtttttcaga cggcatattg aatatagtgg tttaac
//
LOCUS       DBBZYD010000039        17053 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.039, whole genome shotgun sequence.
ACCESSION   DBBZYD010000039 DBBZYD010000000
VERSION     DBBZYD010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17053
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.039"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..808
                     /locus_tag="ACJJDL_001060"
     CDS             <1..808
                     /locus_tag="ACJJDL_001060"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7573786.1"
                     /translation="RYRTPNIKYIYQDNQGTAEARNTGIKNSNGKYIVFIDSDDFINC
                     QVLLDFLSKDDIDMPDVVFLNAVKYDKGSVSHFGEDYQPEKILKQSKVEVLKGLCRFR
                     KFPGSACNKIIKRELIIKEKLFFEKEVYAEDIEWSMRLFNAATTFSYLDGCYYYYRQG
                     RKDSKTGTVSEKSIKSLLYILEKNAEMEFDRDISSYLYSFLSYEYLVLLFIMTSKNIE
                     CDADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            849..1379
                     /locus_tag="ACJJDL_001061"
     CDS             849..1379
                     /locus_tag="ACJJDL_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HGG7573787.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGSTVLDDAVIEDEVMIGAGSLVPPRKRLAGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(1413..1529)
                     /locus_tag="ACJJDL_001062"
     CDS             complement(1413..1529)
                     /locus_tag="ACJJDL_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HGG7573788.1"
                     /translation="MPSEPEKRLSDGIFACNSNADGQNQGASDTVIGCVPSA"
     gene            complement(1754..3349)
                     /locus_tag="ACJJDL_001063"
     CDS             complement(1754..3349)
                     /locus_tag="ACJJDL_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HGG7573789.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWTPA
                     PKPRDATVRMVEPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGRFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(3456..3851)
                     /gene="hisI"
                     /locus_tag="ACJJDL_001064"
     CDS             complement(3456..3851)
                     /gene="hisI"
                     /locus_tag="ACJJDL_001064"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HGG7573790.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(3882..4649)
                     /gene="hisF"
                     /locus_tag="ACJJDL_001065"
     CDS             complement(3882..4649)
                     /gene="hisF"
                     /locus_tag="ACJJDL_001065"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HGG7573791.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNSENTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(4662..5399)
                     /gene="hisA"
                     /locus_tag="ACJJDL_001066"
     CDS             complement(4662..5399)
                     /gene="hisA"
                     /locus_tag="ACJJDL_001066"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HGG7573792.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGKIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(5432..6070)
                     /gene="hisH"
                     /locus_tag="ACJJDL_001067"
     CDS             complement(5432..6070)
                     /gene="hisH"
                     /locus_tag="ACJJDL_001067"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HGG7573793.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGYRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(6201..7703)
                     /gene="pta"
                     /locus_tag="ACJJDL_001068"
     CDS             complement(6201..7703)
                     /gene="pta"
                     /locus_tag="ACJJDL_001068"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HGG7573794.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMSQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDIVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7888..8946)
                     /gene="fbpC"
                     /locus_tag="ACJJDL_001069"
     CDS             complement(7888..8946)
                     /gene="fbpC"
                     /locus_tag="ACJJDL_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HGG7573795.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANDKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8967..10484)
                     /gene="fbpB"
                     /locus_tag="ACJJDL_001070"
     CDS             complement(8967..10484)
                     /gene="fbpB"
                     /locus_tag="ACJJDL_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HGG7573796.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(10552..11547)
                     /gene="fbpA"
                     /locus_tag="ACJJDL_001071"
     CDS             complement(10552..11547)
                     /gene="fbpA"
                     /locus_tag="ACJJDL_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HGG7573797.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALITYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(11798..12268)
                     /locus_tag="ACJJDL_001072"
     CDS             complement(11798..12268)
                     /locus_tag="ACJJDL_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HGG7573798.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGWEQELVLIW
                     RAEADIGNGGILQFVCNWSFPAAEKTCSVLKKIGAIHSAMLIHRAADALDKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(12325..13701)
                     /gene="argH"
                     /locus_tag="ACJJDL_001073"
     CDS             complement(12325..13701)
                     /gene="argH"
                     /locus_tag="ACJJDL_001073"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HGG7573799.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIRSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIRREITAELLG
                     FEQICQNSLDAVSDRDFAVEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSKLPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMSA"
     gene            complement(13720..14589)
                     /gene="galU"
                     /locus_tag="ACJJDL_001074"
     CDS             complement(13720..14589)
                     /gene="galU"
                     /locus_tag="ACJJDL_001074"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HGG7573800.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(14617..15216)
                     /gene="rdgB"
                     /locus_tag="ACJJDL_001075"
     CDS             complement(14617..15216)
                     /gene="rdgB"
                     /locus_tag="ACJJDL_001075"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HGG7573801.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAEYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELAGKTDKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHREQALADLIRKLAL"
     gene            complement(15209..15442)
                     /locus_tag="ACJJDL_001076"
     CDS             complement(15209..15442)
                     /locus_tag="ACJJDL_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HGG7573802.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(15550..16083)
                     /locus_tag="ACJJDL_001077"
     CDS             complement(15550..16083)
                     /locus_tag="ACJJDL_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HGG7573803.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(16185..16643)
                     /gene="nudB"
                     /locus_tag="ACJJDL_001078"
     CDS             complement(16185..16643)
                     /gene="nudB"
                     /locus_tag="ACJJDL_001078"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HGG7573804.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            16854..16930
                     /locus_tag="ACJJDL_001079"
     tRNA            16854..16930
                     /locus_tag="ACJJDL_001079"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16888..16890,aa:Pro,seq:ggg)
BASE COUNT         3487 a         4109 c         5211 g         4246 t
ORIGIN      
        1 cagataccga acaccaaaca tcaaatatat atatcaggat aaccaaggga cggcagaagc
       61 taggaatacc ggaataaaaa attcaaacgg aaaatatata gtctttattg attcggatga
      121 ttttattaat tgtcaggtct tgctggattt tcttagtaaa gatgatattg atatgccgga
      181 tgtggttttt ttaaatgcgg ttaaatatga taagggaagt gtttcacatt ttggcgaaga
      241 ttatcagcct gaaaaaatac tcaagcaatc caaagtcgaa gttttgaaag gattatgccg
      301 atttagaaaa tttccgggtt cggcgtgtaa taagattata aaaagggaat tgattatcaa
      361 agaaaaactg ttttttgaaa aagaggttta tgccgaagat atcgaatggt caatgagatt
      421 atttaatgcg gcaacaactt tttcttattt ggacggttgt tattactatt atcggcaggg
      481 aagaaaagat tctaaaacag gaactgtttc ggaaaaaagt ataaagtcat tattatatat
      541 tttggagaaa aatgcggaaa tggaatttga tagggatata tcaagttatc tttattcttt
      601 tctttcctac gaatatctcg ttttgctttt tatcatgacg agtaaaaata tagagtgtga
      661 tgctgatata aaaagaaggg cgtatcattt aaggtttatg ctgttaaagt ccaataaatt
      721 gatatataag ctgatattcc cgataatcac attattcggg gtcgatatta caggcaggat
      781 tttaaaagca atcaggggga atatttaata aatcctttaa cactatacat cttaccgaag
      841 gaggaaaaat gaacgcaatc cgaactttcc aaaaccgcac gcccgaaatc cacgaaagct
      901 gtatgataga cgaagcgtgc gtcgtcatcg gcgaagtgtc gcttgccgaa gacgtttctg
      961 tgtggccgtg cgccgtgttg cgcggcgatg tgaacagcat caccgtcggc gcgcgcagca
     1021 atatacagga cggcagcgtc ctgcacgttt cccacaaaac cgccgccaaa cccgaagggt
     1081 cgccgctggt tatcggcgaa gacgttaccg tggggcacaa agtgatgctg cacggctgcc
     1141 gtatcggcaa ccgcgtcctg gtcggtatgg gcagcaccgt tttggacgat gccgtgattg
     1201 aggacgaagt gatgatcggc gcgggcagcc tcgtgcctcc gcgcaaacgt ttggcgggcg
     1261 gctaccttta tgtcggttcg ccggtcagac aagtgcgcgt gctgaccgat gaggaaaaag
     1321 cctttttgaa atattccgcc gcgcattatg tgaagctgtc gaaacagtac gggatgtgaa
     1381 atcacatcgg cgttcttgcg tcagccccaa attcatgcgg atgggacgca tccgataacg
     1441 gtatccgatg cgccttgatt ttgaccgtct gcgtttgagt tgcaggcaaa aatgccgtct
     1501 gaaagccttt tttcgggttc agacggcatt ttatcgccga ttgcttttta cagtttgacc
     1561 gaatgttcgc gcgtttcgtg gaacacgatg tccggccaac gttcttgcgt cagccctaaa
     1621 ttcatgcgga cgggatgccc gataacggta tccgatgcgc cttgattttg atcggtgcat
     1681 ttgagttgca ggcaaaaatg ccgtctgaag cccttttttc gggttcagac ggcattttat
     1741 tgccgattgc tttttaaagt ttgaccgaat gctcgcgcgt ttcgtggaac acgatgtccg
     1801 gccagcgttc ttgcgtgagt cccagattca cgcggttagg ggcgaggtag gcgaggttgc
     1861 cgcccgcgtc gatggcgagg ttgcctgcat tggctttttc aaattccgcc agttttttct
     1921 tgtcgtcgca cgatacccag cgcgccgacc agatggatgc gctgtcgaac acggcttcta
     1981 cgccgtattc gttggccagc cgcgaggtaa cgacttcaaa ttgcaacacg ccgaccgcgc
     2041 ccaaaatcaa atccgcgccg ctcatcggtt tgaacacctg caccgcacct tcttcgccga
     2101 gttgttgcaa gcctttttgc agttgcttga ttttcagcgg gtttttgatg cggacgctgc
     2161 ggaacagttc gggcgcgaag aatgggatgc cggtgaacgc cagttgttcg ccttcggaga
     2221 agctgtcgcc gatttggatg ttgccgtggt tcgggatgcc gatgatgtcg ccggcgtagg
     2281 cttcttccac cagctcgcgg tcgtgcgaca tgaaggttac cacgctggag gcggcgattt
     2341 cgcggttgat gcgaaggtgt ttcatcttca taccgcgctc gaatctgccg gagcagacgc
     2401 gcaggaaggc gatgcggtcg cggtgtttcg gatccatatt ggcttggatt ttaaagataa
     2461 atccggagaa tttcggctcg tccggctcga ccatacgtac ggtcgcgtcg cgcggtttcg
     2521 gcgcgggcgt ccagtcaatc aatgaattga ggatttcctg aataccgaag ttgttaatcg
     2581 cagagccgaa gaatacgggc gtgagttcgc cggcgaggaa ttcgtcgaga ttaaactcgt
     2641 tggaagccgc ctgcaccaat tcgatttcgt cgcgcaactg ctggatttcc aatggaaagc
     2701 gttgttccaa ttcgggattg tcgatgcctt tgatgatgtc gaactcgtgc ggcagacgtt
     2761 cgccaccggc ttcaaagaga tagatttcgt cgttcaggat gtggtacacg cctttgaagt
     2821 ttttgcccat gccgatcggc caggttacgg gcgcgcagcg gatttgcagg atgttttcca
     2881 cttcgtccag caactccaaa gaatcgcgca cttcgcggtc gtatttgttc atgaacgtga
     2941 caatcggcgt attgcgcagg cggcagacgt tcaagagttt gatggtttgc gcttccacac
     3001 cttttgccgc gtcgatgacc atcaacgcgc tgtccacggc ggtcagaacg cggtaggtgt
     3061 cttcggagaa gtcttggtgt cccggcgtgt ccaagaggtt gacggtgtgg tctttgtagt
     3121 cgaactgcat cacgcttgat gccacggaaa tgccgcgctg cttctcgatg tccatccagt
     3181 cggaggtggc gaatttgccg gtttttttgc cttttaccgt acccgcgctc tgaatcgcgc
     3241 ccgaaaacag caacagcttt tcggtcagcg tggttttacc cgcgtcgggg tgggagatga
     3301 tggcaaacgt gcggcggcgg cgcacttggt cgaggatttc ttgggacatg gttttctttg
     3361 caaaaaggtt caggccgctt ttcagacggc ccggacagtg tttgagacgg cgaaattgta
     3421 caaaaaaatg cctgataatt caatgttgga ggcggtcagt gcgtgctgcc gtaaatctct
     3481 ttttcgtctt tcaggacggc atcggcggtt tcccacgcgc cgccgcgcca gactttgtaa
     3541 aagcagcttt ctcgcccggt gtggcaggcg atgccgccgt tttgggcgat gagcatcaca
     3601 atggcgtcgc cgtcgcagtc gaggcgcagt tcgcggactt tttgcgtgtg tcccgactct
     3661 tcgcccttca tccattgttt ttggcgcgaa cggctgtaat agtgggcaaa gccggtttcg
     3721 acggtttttt gcagggcttc ggcgttcatc cacgctacca ttaaaacacg tttggtttcg
     3781 gcatcttggg cgatggcgca aaccaaacct ttttcgtcaa atttgacggc ttcaagcagg
     3841 tttttatcca tatttccttt cagacggcat ggtcggggcg gtcagaggcg cacttcgatg
     3901 ccggcttcgc gcatagcgcg tttggcttcg cggatggcga tttccccgaa atggaaaacg
     3961 ccggcggcaa gtacggcatc ggctttgcct tcggttatgc cttcaatcag gtgccggaca
     4021 ttgccgaccc ctccggaggc gatgacgggg atgtcgacgg cttcggcaac ggcgcgggtc
     4081 agcggcaggt tgaaaccctg tttcgtaccg tccctgtcca tcccggtgag caggatttcg
     4141 cccgcgccgc gtttttgcat ttcgatcgcc cattccaccg catccaaacc ggtcggattg
     4201 cgcccgccgt gggtaaagat ttcccagcgt gtgttttcgg agttgacggc tttggcatcg
     4261 acggcggcga cgatggcttg cgaaccgaaa aatccggcgg cttcgtcaat caggtcggga
     4321 cgggtaacgg cggcggtgtt gatgctgact ttgtccgcgc cggcattgag caggcggcgg
     4381 atgtcggcaa cggtgcgtac gccgccgccg acggtcaggg ggatgaagac ttgtccggca
     4441 acctcttcga tgatgtgcag gatggtgtcg cggttgtcgg atgaggcggt gatgtcgagg
     4501 aaggtcaatt cgtccgcgcc ttcgccgttg tagcgtttgg cggcttcgac ggggtcgccc
     4561 gcgtcgcgca aaccgatgaa gttcacgcct ttgacgacgc gcccgtcttt tacgtcgaga
     4621 caggggatga tgcgttttgc cagtgccata atcggatgcc tttagtcgag ggaatctgcc
     4681 agttgctgcg cttgggcaaa atcgatgctg ccctcgtaaa tcgcgcggcc ggtaatcgcg
     4741 cctgctacgc catgtttttc ggcggcacac agggcgcgga tgtcgtccaa gccggtcagt
     4801 ccgccggagg cgatgacggg aatgcggacg gcttgggcga gtttgaccgt cgcgtcgatg
     4861 ttcacgccgc tcatcatacc gtcgcgcccg atgtcggtgt agatgatgct gttgacgccg
     4921 tcgtcttcaa agcgttttgc caaatcaatt acatgatgcc cggttacggt tgcccagccg
     4981 tcgatggcgg ccataccgtc tttggcatcc agcccgacaa taatcttgcc ggggaaggct
     5041 ttgcacgcct cgcgcacgaa gtcggggttt ttgaccgccg ccgtgccgat aatcacgtcg
     5101 tttaagccca aatccaaata ttgtccgatg gttttcaaat cgcgtatgcc gccgccgagc
     5161 tgtacgggga tgtctttggc gacagcggca aggatgtctt tgatggcggg caggttttgc
     5221 ggaacgccgg caaacgcgcc gttcaaatct accagatgca ggcggcgcgc gccttgtttg
     5281 aaccagtgca gcgcggtttc ggcgggcgaa tcggaaaaga cggtcgcctc ttccatcagc
     5341 ccttgtttca ggcggacgca gcgtccttct ttcaaatcga tggcgggtat cagcagcata
     5401 atttttctcc ttgtgcgggg ccgtgtccgg cttaccagtt taaaaagttt ttcaacatcg
     5461 tcagcccggc atcgtggctt ttttcggtgt gaaattgcgt ggcgaatacg ttgtctttgc
     5521 cgacgatgca ggcaaacggg gacgggtagt cgctttcgcc caatatggtt tcgggatttt
     5581 cgggggcgaa atagtagctg tggacgaagt aaaaacgcgt gtcttgggga atatctttaa
     5641 acagcgggtg gttttgggtt tggcgcacgg tgttccagcc catatgcggg actttcagac
     5701 ggtatccctg cgggtcgcgg aggtcgcgct caaagcgtct gactttgccg ccgaaccagc
     5761 ccaagccgtc ggtgtttcct tcttcactgt ggtcgaataa aagttgcgcg ccgacgcaga
     5821 ttccgaaaaa gggtttgttt tttaaggcat ctttgactgc ctcgtccagg ccgccgcgcg
     5881 tcagtgccgc catacagtcg ggcatcgcgc cctgcccggg aaaaatgact ttgtcagcgc
     5941 gggacacgcg ttcggggtcg ccgcttaaaa agatttcggt attttttccg gcaagctgcc
     6001 ccgccgtccg gacggatttc aatacggaat gcaggttgcc cataccgtaa tcgataatgg
     6061 cgatttgcat ggcttcctcc tctttttttg caatatggct gcgattttaa caaacaaatg
     6121 tgccgtgctg ataaaaatgc cgtctgaaaa cgggagtctg tcttcagacg gcatagggtt
     6181 caaacccgga aagccgtttg tcagccttcc atttgttttg cctgaacggc agtcagggcg
     6241 atggtgaaca cgatgtcttc caccagcgcg ccgcgcgaca ggtcgttgac cggtttgcgc
     6301 aggccttgca gcagcgggcc gacgcttaag acgttggcac tgcgttggac ggctttatag
     6361 gtgcagttgc cggtgttcag gtcggggaag accaaaacgg ttgcctgtcc tgccaccggg
     6421 ctgcccggag ctttggattt gcccacgccc ggcacggttg ccgcatcata ttgcagcggg
     6481 ccgtcgatgg cgaggtcggg gcgtttttcc cgggcaagtt tggttgcttc gatgacgata
     6541 tcgacatcgg ggccgctgcc ggagttgacg gtggagtagg aaatcatcgc cactttcggg
     6601 tcgatgccga aggcttttgc ggaatcggca gactggatgg cgatgtcggc aagctgttgc
     6661 gcggtcgggt tcggattaac cgcgcagtcg ccgaagacga ggacttggtt gggcagcagc
     6721 ataaagaata cgctggacac gaggcttgcg cccggtgcgg ttttaatcag ttgcaaagcg
     6781 gggcggatgg tgttggcggt ggtgtgaacc gcaccggata ccaaaccgtc cacatcattt
     6841 tgcgacatca tcatcgtacc gagtaccacg gtgtcttgca gttgcttgcg cgcgtcttcg
     6901 ggtgtcaggc ctttggattt gcgcagttcg cacatcggct cgacgtattg ttcgaccaat
     6961 gaggcgggat cgatgatttc caaagagtcg ggcaggctga tgccgcgttc tttggcaacg
     7021 gcttcgactt cttcgcgttt ggcaagcagg acgcagcggg caatgccttt ttcgtggcag
     7081 atggcggcgg cttggacggt gcggggttct gcgccctcag gcaggacgat gcgtttgtcg
     7141 gcttggcggg cgaagtcgat caggttgtag cggaattgcg ccggcgacag gcgttttgct
     7201 tcgcggcctg ccaatacgga tacgtctttc agcgcgtcgc tcgaaccgaa gaaggtcagg
     7261 ccggtttttt cggctgccgc ttcggcaacg gaggctgccg cgccgtccac gacaaaacct
     7321 tccaatacgc ccggcgcggc ggcgaagaac tgtttggcaa ggttcagccg atttgccagt
     7381 tcgtcggcat cggcgttgtc ggaacggacg gcgaagacgg ctgccgcgtc aagggacaat
     7441 gccagttcga cgtttttgcc tgcgaggtag attttgtcgg catcgggcgc gatgccttcg
     7501 atgacgaggt tggcggcatc gagtgcggca actttgccga ccagtgcgtc gaaccagtcg
     7561 tcgcttttgc cttgcgcgag cagggtttcg gcggttgcgt caacggcttg gaaaatttgt
     7621 gcgtccagtg cttttgcaaa ggcttgtgcg gcggcggagg cgtccagtcc ggcagatacg
     7681 ggtacgatga gtacttttgc catgatatat cctttcgtat gctgcggtgt gcggcatatg
     7741 tggttggaag gggcggcata taggcagaaa cggctgcctg cgtgccgtgc gtgccgtgtt
     7801 tggcttgagg cgcgcaggtt gaatatagca aacaaattct gtttccaaca agataaatat
     7861 ccgcaggctt gtggatgctg ccgcctttca gagggtattt ccggggaaga acagggcggg
     7921 accgtccaaa tggaggacgg cggaaatgcc gtctgacagg gtgggggcgg aagggaggtt
     7981 gagcgtgagg acggtttgtc cgacccggag actgatttcg gtatgccgcg ctttgggcgt
     8041 ggttttgaga accacggcgt gaatggaggc ggtgggtgcg gaatgggggt gaaggctgaa
     8101 ctgttccgga cggatgagca gtgtgccgcg tgtgcctgcg ggtgcgccgc tttgaacggg
     8161 caggcggccc aatccgcaat cggcggtgcc gtcggcgttg agcgcggcgg ggaacacgat
     8221 gccttcgccg ataaacaggg cggcatcaag gtcggcaggt tgtcggtaca attcgtgagg
     8281 gcttgcagtt tggaggatgc gcccctgttt catcacggca atccggtcgg cgtattgcag
     8341 ggcttcttcg cggtcgtggc tgacgaaaac ggcagatttg tcgttggcgc gcagggcggc
     8401 aatcatgtct tcgcgaatct ggcggcgcaa ctgttcgtcc agcgcgctga agggttcgtc
     8461 caacaaaatc agttcgggat cgggtgcgag ggcgcgggcg agggcgacgc gctgttgctg
     8521 tccgcccgaa agttcgtgcg gatagcgtcc ggcaagttcg gaaatgccgg tcaattccaa
     8581 catagcttcg atgcgctgcc gctcttgcgc cgtcttgcct ttgccgttgc ccagcccgta
     8641 ggcggtgttg cggtaaacgg tcaggtgggg gaacagcaca ccttcctgta cgacataacc
     8701 caaacggcgt tcgcggacgg ggaggttggt atttttcgag aagatggttc tgccggaaag
     8761 cgaaatttcg ccaaaatcgg gttgttcaaa accggcaagg cagcgtaaaa gggtggtttt
     8821 gccgcagccg gacgcgccga cgataaagag gatttcgccc gggtcgaggc tgagcgaaat
     8881 gtcgtttaaa actggggtgt tttgaaaact tttggacagg tgtccgatgt gcagggcggc
     8941 ggtcatggcg gtacttcctc aagctgttat ttgaaggcgt atttcttcag caggaatacg
     9001 gggatgccgg aaaataatac cagcatcagc gcgtaagggg tggcggcggc gtattgtgcg
     9061 tccgatgtgt attcccaaac ggcggtggag agtgtgtgga catcgtcggt ggtcagcagc
     9121 agggtggcgg tcagctcttt catcagtttg aggaagacga gtgcgaatgc ggcggtaatg
     9181 ccgggcagga tggacggcag taccaacgtc ctgaaaataa agaagtgtcc gcgccccaat
     9241 gttgcgccga cctgttccat cccttttggg agttgttcca aggaagtcct cagggtggtt
     9301 tgcgccatcg gcaggtaaag catgaaatag gcaaggatga cgacgataaa ggtttggtaa
     9361 acggcagggg tgtagttgat gctgaaataa accaaggata gggcgataac caaaccgggg
     9421 acggcgtgca gtaaaaacgg cagcctgtct atccaaacgg ttaaaaaatt gcgatagcga
     9481 accgatgccc aaacaagggg caaggcacat aatatagtca aaatcgcacc taaagccgat
     9541 acgcttaagg aacggataaa ggcatcaaat acggatacga gcgcgaatgt gccggaagtg
     9601 ccgaccatca tccaatgtat caatacgcca aaggggataa taatgcccaa agtcaacaag
     9661 ctgcttaaaa aaacaatcgc gccaatctga ccgggcagtt tgagggtttt gacgggataa
     9721 ggacgggcaa cgcctttgcc gctgtggtaa atcttggctt tgccgcgaaa tatgctttct
     9781 ccaaatacga cgatgccgca caccgccatt aaaacagcgg aaagcagggc ggcggtattg
     9841 ttgttgtagg acatttcgta ttcttggaaa atggcggtgg taaaagtggg gtagttcaaa
     9901 atggataccg cgccaaattc gaccagcata tgcagggcaa tcagtaacac gctgctgccg
     9961 atggcgggtt tgagctgggg gaggatggcg gaaaaaaagg tttgcaggcg gcttttgccc
    10021 aaggacaggc tgacttcttc gtaagacagg ctgatgcgtt tgagtgccgc ctcgacgggc
    10081 aggtaggcga gcgggaacga ggacaggctc ataatcatca ctgtccccca aaagccttcg
    10141 acacggaagg tcaggctgat ccaggtgaaa cagctgacaa atgcggggat gcacaaaggc
    10201 agggtgattg ccgtctgaaa aaaggttttg ccgaagaagc ggtaacgttg gaacaaaagg
    10261 gcgcaggcaa tgcccaaaac aatggaaatc agggtaacgc ccgccatcat cgtcaaggtg
    10321 ttggagagca aatcccacat acgcgggcgg aacaacagtt cgacggcgcg gttgatgccg
    10381 acctgccacg aacgcatagc gacatataaa aaaggcaggg taagcggtag ggcaatcagt
    10441 aggatgaggc cggtaagcca aatgggtatt tttttaggag acatagtgtt tttcatcggc
    10501 aaaacgggcg gacagtataa atgtccaccc gtttgacaat ccgaaaacgg cttatttcat
    10561 accggcttgc tcaagcagcc gggtggcgtg ttctttttcg gaaacagtgg tggcggacac
    10621 ttggggtgct tccaacttgg cgatgggttc caaattgaag gtggatacca cgtgcggatt
    10681 caaaggatat tcggcacgga cggcggtcag ggcgcgctgt ccttccttgc tggcgaggaa
    10741 ggcgacgaat tttttcgcct catccttgtt ttgggaggat tttaacacgg ctgcgccgga
    10801 ataggtaatg agtgcgccgg gatctctgtg gcggacgaaa ttcaggcggg tgtggacatt
    10861 ttgtacgcct ttttcacgcg cgaaagcgtg ccagtagtag ttgttgatga gggcggcatc
    10921 gatttcgccg ttttcaaccg cttgaagggc gacggagttt ttagcgtaag gcttgccgta
    10981 ttctttcaga cctttgagcc atttcaatgc ggccgcttcg cctttcagtt tgacgatggc
    11041 gacaacctgt tccaagaacg cgccggaagt gggggcgtaa ccgatgcggt ttttccattt
    11101 cggcgtggcg taattcagga cggatttttc caaatctttt tcagacagtt tgcgggtgtc
    11161 gtaaacgacg acgcgcgaac gtccgctcag tgccacccag tcttttttgg cggcaaccgg
    11221 cacgcccttg ccgcgtgttt cgttgatggt ggaggcgggc aggggctcta ggaggttggc
    11281 tgcggaaagg gtggcgagtg ccgggatttg ttcggaatag aatacgtcgg cggggcttcg
    11341 gctgccttct tctttgattt gaccggcaag ctggtcgcct ttggcgctgt tgagtttgac
    11401 tttgatgccg gtagcccggg taaaggcatc tgcaacggct tgtgccgctt ctttgtgttg
    11461 gccgttgtac acggtaatgt ctgccagcgc gggggttgcg gcggtcaggg ctgcggcaag
    11521 cagtgcgtat cggatagatg ttttcatatc gattttctcc taatgaatga gagtgtacac
    11581 cttgttaaga cataacggcg tgtagtgtat tccttcttct ttataaatgc aaataattat
    11641 tttttaaatt tgttattatc cgatccggtt atggtttgtt ctgacttgta ttttttccgt
    11701 gcatcgcgcc cgtaaggcgg aagcggcggg caatgcgtgg cggaatgtgg gtaaaggcgg
    11761 cattttgatt tgtcggaatg cttgagaacc cctctcttta aaacagcgtc tgaacagggt
    11821 tgccggaata gtattgccat cccggcagat acagtttgtc ggggtcttgc caatattgtt
    11881 catccagact gttcggcagt gaggcggttt tgttgtcgag atgttttgtt atatcccaca
    11941 tttctttcag gtttttacct tccgattgga ggtggcggat ttctttgtcc aatgcgtctg
    12001 ccgcccgatg gatcagcatt gcgctgtgta tcgcgccgat ttttttcaga acggaacaag
    12061 tcttttcggc ggcggggaaa ctccagttgc agacaaattg cagtatgccg ccgttgccga
    12121 tatcggcttc tgcccgccaa attaaaacca gctcctgttc ccacccgtcc atgctttcga
    12181 gtttgccgtc atgctgttca aaaagtttgt ccaccgcctg ccacatcatc tgttcgaagc
    12241 ggtcggcttg ggtatccgta tcggtcatag tgttcttgtc ttttaaaaat gccgtctgaa
    12301 catttcttca gacggcatcg ggggttaagc tgacatttcc cgccagcgtt tgacttggaa
    12361 acggacttgt tcaggcgcgg taccgcccaa gtggttgcgc gcgtttaagc tgccttcggg
    12421 tgtcagcacg ccgtaaacgt cgtcggcaat caaatcgctg aaaccttgta agacttcgag
    12481 cggcagtttg ctcaaatcga cacccgcttg gtcggcgtgg cgcacggctt gggcgacgac
    12541 ttcgtgggca tcgcggaaag gcatgccttt ttttaccaag taatctgcca aatcggtggc
    12601 ggtagcgaag ccctgcatca cggcggcgcg catattgtcg ggtttgacgg ttacgccgcg
    12661 catcatatcg gcgtaaatcc gcaacgtgtc gataagcgtg tcggcggtgt cgaacaaggg
    12721 ttctttgtct tcctgattgt ctttgttgta cgccaagggc tgcgatttca tcagggtaat
    12781 caagccgata aggtgtccga tgactcggcc ggatttgccg cgcacgagtt cgggcacgtc
    12841 gggatttttc ttctgcggca tgatggacga acctgtgcag aaacggtcgg cgatgtcgat
    12901 aaagccgaaa cgcggactca tccacaaaat caattcttca gacaggcggc tcaggtgaac
    12961 cataaccagc gaggcggcag ccgtgaactc gacggcaaaa tcgcggtcgg atacggcatc
    13021 gagcgagttt tggcagattt gctcgaaacc cagtaattcg gcggtaattt cgcgccgaat
    13081 cgggtaggtc gtaccggcaa gggcggctgc gccgagcggc atacggttga cgcggcggcg
    13141 gcagtccgcc atccgttcgt tatcgcggcc gagcatttcg acgtaggcga gcatatggtg
    13201 tccgaagctg acgggctggg cgacttgcag gtgggtaaag cctggcatga cggtttcggc
    13261 gttttgttcc gccaaatcca gcaatgccgt ctgaaggctt tgaatcaggc ttcggatgac
    13321 ggtaatctgg tcgcgcagcc aaaggcggat gtcggtggcg acttggtcgt tgcggctgcg
    13381 gccggtgtgc aggcgtttgc ccgcgtcgcc gattttgtcg gtcaggcggc gttcgatgtt
    13441 catgtggaca tcttccaaat cggacgacca ttcgattttg ccgctgcgga tttcttcgag
    13501 gatttccgcc atgccccgac ggatgtccgc caaatcgcct tcgtccaaca cgccggtttc
    13561 tttcagcatt tgcgcgtggg caagcgagcc ttggatgtcc cattcggcaa ggcgtcggtc
    13621 gaaaccgatg gaggcggtgt attgtttgac gagttcggaa acgggttcgt tgaaacgtcc
    13681 ggaccaggtt ttgtcgtgca taaggattcc ttgatgtggt tattcggtac ggtatttttc
    13741 caaaaggcgg cggaagggtt cgccggtttc ggggtgtttc aggccgtagg cgacggtggc
    13801 ttccagatag cccagtttgc tgccgcagtc gtagcgcgtg ccttcaaagg ggtgcgctag
    13861 gacaaattcg tgatcgagca gcttggcgat gccgtctgta agctggattt cgttgcccgc
    13921 gccgcgcggc agtccggtca gtaagtcgaa aatgcgcggg gtgaggatgt agcgtccaac
    13981 aacggcaagg ttggagggcg cgtcttcggg cttgggtttt tcgacaatgc cggtaatgcg
    14041 ttggaactgt ttgagctgtt cggtttcgac gatgccgtat gagccggttt gcgatgcttc
    14101 aacggtttct acgcccaaaa tgctgttgcc gctgcgcccg tacacttcga ccatttgttt
    14161 gagcgcgcct ttgggggcat caatcaggtc gtcggcaagg ataacggcaa agggttcgtc
    14221 tccgatggcg gcgcgggcgc acaagacggc gtgtcccaag cccagtgctt ccgcctgacg
    14281 gatgtagagg caggtaatgt tcggcggcag gatgttgcgg acgtgttcca acaatttgtc
    14341 tttatggcgc atttccaact cggtttcgag ttcgtatgcc ttgtcgaaat ggtcttcgat
    14401 gctgcgtttg ttgcgtccgg taacaaacac catttccgtg cagccggctt ccacggcttc
    14461 ttctacggcg tattggatca gcggcttgtc gacgatgggc agcatttctt tcgggcttgc
    14521 cttggtggcg ggcaggaagc gtgttcccat ccctgcgacg gggaagacgg ctttttttat
    14581 cggtttcatt ctttttcctt tgtattgttt tgatgtttaa agggcgagtt tgcggattaa
    14641 atcggcgagt gcctgctcgc ggtggctttc gcggtttttg acctccgaat ccaattcggc
    14701 ggcggttttg ccgtgtccgg gcagataaaa atacgggtcg taaccgaaac cgttttcacc
    14761 ggcgggaacg ccgttccatt gtccgtgcca tacgccctcg gcgataattg gacgcgggtc
    14821 gtctttatgg cggacaaaaa ccaatacgca gacgtagcag cagcttttgt cggtcttgcc
    14881 ggcaagttcg gcggcaagtt tcaggttgtt ggcggtatcg gatttgggat tgtcgcccgc
    14941 gtaacgtgcg gaatggatgc ccggcgcgcc gtttagggcg gcggcacaga tgccgctgtc
    15001 gtcggcaagc gcgggcagcc cgctgtattc ggcggcatgg cgtgcttttg ccagcgcgtt
    15061 ttcgacaaag gtgggatagg gttcggggca ttcgggtatg ccgaatgcgg attgcggcaa
    15121 tacggtgatg ctgtaaggtt tgaataagtt gccgaattct tcgagcttgc cggcattgcc
    15181 gcttgccaaa acgatttttt ccggtttttc agacatagcg gttttccttt gcggcggatt
    15241 gggcggcgcg tagggatttg tgccgcaggt agagggcgag gctgccgatt tgtccgaaca
    15301 gtgcgccgaa tgcgaaaaga aaggaggcga cggcgaaggc tttgctgccg acggtcagca
    15361 gataagcacc caagaggacg agcagcataa atgccagtgt gaagagggca acagacaaca
    15421 gatagatttt tcggcggttc atggcgttcg gtcggaaacg gtatgttcgg attatagccg
    15481 attgggacgg tattccctag agcttggaaa aatgccgtct gaaacggcgt tcagacggca
    15541 tggcgggcgt tatgcctgtt tgttccaacg ttcgatggat tctttgatga cttttttcgc
    15601 ttcttccgca tcgccccacg attcgacttt ggtcgtacct gcttttttca ggtctttgta
    15661 atggttgaag tggaactcga tttgtttgat cagctgttgc ggcaaatcgg acaaagtttt
    15721 gtaggcgttg ccgttgttgc ggtcgtcggc aggaacgcag acgattttgt cgtccacttc
    15781 gccgtcgtca acgaatttca tcacgccgat aacgcgcgct tccaagaata cgccggttgc
    15841 caaaggttgt tcggtaacga gcagcacgtc caattcgtcg ccgtcttcgt ccaaagtttg
    15901 gggaatgaag ccgtagttgg tcggtttggc gaagatggcg ggttcgacgc ggtcgagttg
    15961 gaatgcggcc agtttgcggt tccactcgat tttgtggttg ctgccggcgg ggatttcgtt
    16021 gacgacgttg atgatgccgc cgtccacatc gccgggggtc aggatttggt tgaagtctgc
    16081 catttggttt cctttgtttg ggaaagtttg aagtttgaaa gtatagcaca aacgtccggc
    16141 tgaaaatgcg cccgatgccg tctgaaaggg tgtacgggcg cgtgttaccg tttgcccaaa
    16201 aacctgccca gttccagaat cgcgcgcctg ttggacgggg aaaacacttt ttccgccgct
    16261 tcttccaagc cgaaccagcc gtaggagacg tgttcttcgg gttgcagggc gatgggcgta
    16321 tcacgcggga tttcggcaga gaagaggtgt tcgcggtttt caaacacgcc ttttggatag
    16381 cggtgccgcc agtggtggta gatttcgtaa accgtgctgt cgtgccagtc ttgaagctgc
    16441 ccgtccgcca gcaggatgcc ggtttcttcc caaacttcgc gccttgccgt ttgggcgacg
    16501 gtttcgcccg gttcgaggct gccggttacc gactgccaaa atccttccgg atgcgtgcgt
    16561 tcgatgagca ggatgccgcc gtccccgcta taaaggacga ccagtgcgga gacggggtat
    16621 ttgagcggtt ttgccatcgg catctttcgg cgggctgcgg taatgaaggg gcggattata
    16681 gcaaacgccg cacgttatgg cgtttatcct tttccgtatc cttttttctg cacggatggg
    16741 acgcgccggt gtttgccggt aaattttccg ttgtgtcaaa aagataaggg cggttgtgat
    16801 tttaatgctt gccaaagcgt cgggcggaaa ctataatccg aaacttatcg agtcggagtg
    16861 tggcgcagtc tggtagcgca cttgcatggg gtgcaagggg tcgaaggttc gaatcctttc
    16921 actccgacca aaaattccga aagccgcttt caaaagcggc ttttttgccg tccgtatgat
    16981 tatgatgtag agtacgcggc gacagacatt caaatgccgt ccgaaaaccg ttcagatggc
    17041 atttctttat ctt
//
LOCUS       DBBZYD010000040        16992 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.040, whole genome shotgun sequence.
ACCESSION   DBBZYD010000040 DBBZYD010000000
VERSION     DBBZYD010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16992
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.040"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..485)
                     /locus_tag="ACJJDL_001080"
     CDS             complement(<1..485)
                     /locus_tag="ACJJDL_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HGG7573805.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     A"
     gene            complement(488..685)
                     /locus_tag="ACJJDL_001081"
     CDS             complement(488..685)
                     /locus_tag="ACJJDL_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573806.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            complement(682..948)
                     /locus_tag="ACJJDL_001082"
     CDS             complement(682..948)
                     /locus_tag="ACJJDL_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573807.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKQDAKADRDNIAASLGRIENKLEKVNEKLDRKADKS"
     gene            complement(960..1298)
                     /locus_tag="ACJJDL_001083"
     CDS             complement(960..1298)
                     /locus_tag="ACJJDL_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573808.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            complement(1295..1513)
                     /locus_tag="ACJJDL_001084"
     CDS             complement(1295..1513)
                     /locus_tag="ACJJDL_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573809.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            1526..1696
                     /locus_tag="ACJJDL_001085"
     CDS             1526..1696
                     /locus_tag="ACJJDL_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HGG7573810.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            complement(1741..2046)
                     /locus_tag="ACJJDL_001086"
     CDS             complement(1741..2046)
                     /locus_tag="ACJJDL_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573811.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(1943..2362)
                     /locus_tag="ACJJDL_001087"
     CDS             complement(1943..2362)
                     /locus_tag="ACJJDL_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573812.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQVVIE
                     KMKRDKAQAMLLSAQNYARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            complement(2334..2570)
                     /locus_tag="ACJJDL_001088"
     CDS             complement(2334..2570)
                     /locus_tag="ACJJDL_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573813.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSLVSVKRQEVENESRETASE"
     gene            complement(2573..2737)
                     /locus_tag="ACJJDL_001089"
     CDS             complement(2573..2737)
                     /locus_tag="ACJJDL_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573814.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            complement(2740..2946)
                     /locus_tag="ACJJDL_001090"
     CDS             complement(2740..2946)
                     /locus_tag="ACJJDL_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573815.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            complement(2943..3485)
                     /locus_tag="ACJJDL_001091"
     CDS             complement(2943..3485)
                     /locus_tag="ACJJDL_001091"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7573816.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVAAILRDDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNSAAGKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGHHSRLAYAQAGGIVEPFFISNDTDLALFKTTK
                     WGICRAIADAIAMKLGAARV"
     gene            complement(3793..4221)
                     /locus_tag="ACJJDL_001092"
     CDS             complement(3793..4221)
                     /locus_tag="ACJJDL_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HGG7573817.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(4202..4636)
                     /locus_tag="ACJJDL_001093"
     CDS             complement(4202..4636)
                     /locus_tag="ACJJDL_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HGG7573818.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
     gene            complement(4812..5228)
                     /locus_tag="ACJJDL_001094"
     CDS             complement(4812..5228)
                     /locus_tag="ACJJDL_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573819.1"
                     /translation="MSGEKSENLPADEQQKMLQEFLELQKQDIAVKQKELESRKDEIQ
                     SHERIALATIEAQKQGEQQHGEIFKEVHKRRLNAVIAISFLIAAVLITALWRDKDSVA
                     IEIVKIGGAVALGYFAGINRGKAQTLEKQRREKDSD"
     gene            complement(5225..5416)
                     /locus_tag="ACJJDL_001095"
     CDS             complement(5225..5416)
                     /locus_tag="ACJJDL_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573820.1"
                     /translation="MNTVKEYTAVRERLLNAADYLEEVRKDRKTGNIASVEFVPPKIG
                     ARGYGKFKVRYKTLVAVDL"
     gene            complement(5460..5702)
                     /locus_tag="ACJJDL_001096"
     CDS             complement(5460..5702)
                     /locus_tag="ACJJDL_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573821.1"
                     /translation="MDTLKVNPFPNKIKEKCRLKTARMLFQTAFFVVGHQCPAICAAL
                     RLSRYGILVCIFRRNLPYIVLKYYTVVLYGFDFLEK"
     gene            5939..6106
                     /locus_tag="ACJJDL_001097"
     CDS             5939..6106
                     /locus_tag="ACJJDL_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573822.1"
                     /translation="MVDEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNIDFSQW
                     VKSIIKEKIKK"
     gene            6379..6564
                     /locus_tag="ACJJDL_001098"
     CDS             6379..6564
                     /locus_tag="ACJJDL_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573823.1"
                     /translation="MPDEKTLKAKQAEYQRKYDQKRLMKTVSFHLEREKELVDFMQKE
                     IPDFSNWVKSVMKEKMK"
     gene            6765..6965
                     /locus_tag="ACJJDL_001099"
     CDS             6765..6965
                     /locus_tag="ACJJDL_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573824.1"
                     /translation="MDSIKKAQEKYALKRVVKTVSFNSEKELDLIKFSENLDFSNWVK
                     SKIRGDMESEKFKKKAKKNIDK"
     gene            7115..7705
                     /locus_tag="ACJJDL_001100"
     CDS             7115..7705
                     /locus_tag="ACJJDL_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HGG7573825.1"
                     /translation="MNTQLIPTVSGQLDNQTQALVDAHDLHKFLGVETPFSKWIQRRI
                     EEYGFTQALDFIGVDKIVRTEAGFFGQRDKTVQGYYLSLDMAKELCMVERNDKGRQAR
                     RYFIEMEKQAKALPDAVLYRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIGKLLDMN
                     PGAVSYRLKKLNDLGFLEYVPKPKMVVQQQSLGLEG"
     gene            7709..7924
                     /locus_tag="ACJJDL_001101"
     CDS             7709..7924
                     /locus_tag="ACJJDL_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573826.1"
                     /translation="MNTTYTLTFDQDSLKALNLLVFTLNHLKVLEMDMEGIEDGLSAV
                     IETASEKADKLSAAFYNAVYEQEEKAA"
     gene            complement(8085..8603)
                     /locus_tag="ACJJDL_001102"
     CDS             complement(8085..8603)
                     /locus_tag="ACJJDL_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0042262 - DNA protection [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HGG7573827.1"
                     /translation="MAKTRIKQPAIEAAQDKTEVTAFIRQIGDLQREVKRLETEAGDK
                     KAAIEEEYAAQAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDAILNQKERFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
     gene            complement(8713..8880)
                     /locus_tag="ACJJDL_001103"
     CDS             complement(8713..8880)
                     /locus_tag="ACJJDL_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573828.1"
                     /translation="MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGMWKTAEAET
                     LAQAITLWEEV"
     gene            complement(8873..9046)
                     /locus_tag="ACJJDL_001104"
     CDS             complement(8873..9046)
                     /locus_tag="ACJJDL_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573829.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATKFMVKRNREQEVAEYQAQFEDKD
                     GKGRLKTEGNKDE"
     gene            complement(9155..9421)
                     /locus_tag="ACJJDL_001105"
     CDS             complement(9155..9421)
                     /locus_tag="ACJJDL_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573830.1"
                     /translation="MQVLKKVDWKMFVARSFWRWVPVGLTVGVWCFVAGMALHSCAKE
                     PEPVAKEPTKVEAMERQADLEVKVWEGQYESMSVEEKMKGIVYE"
     gene            complement(9511..10425)
                     /locus_tag="ACJJDL_001106"
     CDS             complement(9511..10425)
                     /locus_tag="ACJJDL_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HGG7573831.1"
                     /translation="MKQINQALQQKLVEFKEKSGMNQTQLARGIDTSPASISMYLNGT
                     YADKGGNYETIETKIEAFLEMEDSKARREELVLGFVSTKTTRRIAEVMRDAHEGGETV
                     VIYGQAGLGKTQSVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGRLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKHG
                     ELVQLYSRVSVALNLGESLPDDELFEIAKAALPDADEETLLELVKHSNGNTRRMSKLM
                     RGAVRTANKNGIKMQAGIVKKYSSLIIR"
     gene            complement(10461..12437)
                     /locus_tag="ACJJDL_001107"
     CDS             complement(10461..12437)
                     /locus_tag="ACJJDL_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HGG7573832.1"
                     /translation="MKYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPAEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     NARCAVVAAVLGIKYQYGCSAKAAVAQFLGLLAESKLDAVTLGNLEKANDRSRTAKVG
                     ERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIVGNPQGRGI
                     IERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPSWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYTPKAYREMRLEQDGIAPDMLSA
                     QELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKDEVRVSYDLSDASVVNVFDMD
                     GKFITKAQADGNTREAFPTARIDQLAENRRKGKIKRAENAIKLANAEVNPALEQAAAW
                     DELGHLGGNVIEAEYAVLPKTGTDDFVLFETDRS"
     gene            complement(12439..12768)
                     /locus_tag="ACJJDL_001108"
     CDS             complement(12439..12768)
                     /locus_tag="ACJJDL_001108"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7573833.1"
                     /translation="MYIIQVTVKAGIKACKVSNGFYHGGIMQANEIYKSLEEKNISAR
                     MLASALGVTNQSVSEVIRNGRGSKRIAEAIAKVIQKDLVEVFPHYKKTDCRDKKIAEL
                     KEMLGVG"
     gene            12734..13633
                     /locus_tag="ACJJDL_001109"
     CDS             12734..13633
                     /locus_tag="ACJJDL_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HGG7573834.1"
                     /translation="MPALTVTWMIYTKYLVYQIYLVIFCDVFMERIDLALNLVEERSR
                     LGYSRKNFAEQTGCSAESLRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNA
                     VSDDLNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGK
                     EHITLEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDK
                     AETYLRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFSVES
                     LTELSDEDLQKTYAAVSTKKRKK"
     gene            13842..14057
                     /locus_tag="ACJJDL_001110"
     CDS             13842..14057
                     /locus_tag="ACJJDL_001110"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7573835.1"
                     /translation="MRIGNDLFVKRVQRIPGKLLVTSENPRYAPFEIDLSNTQDDIAI
                     IGRVEWYGRSIPHRKTSLCSATTAKSC"
     gene            14015..14605
                     /locus_tag="ACJJDL_001111"
                     /pseudo
     CDS             14015..14605
                     /locus_tag="ACJJDL_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            14709..15377
                     /gene="hda"
                     /locus_tag="ACJJDL_001112"
     CDS             14709..15377
                     /gene="hda"
                     /locus_tag="ACJJDL_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HGG7573836.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLQHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            15374..16042
                     /locus_tag="ACJJDL_001113"
     CDS             15374..16042
                     /locus_tag="ACJJDL_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7573837.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAKYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLETGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLQSYGKTYFYSDSRNDLPLLRLVSEPVAANPDAELEKEAKEKGWPV
                     LNFK"
BASE COUNT         4415 a         4616 c         3491 g         4470 t
ORIGIN      
        1 tccgccccaa acggctccaa tacctccaca aaggcaggca aatgtttggg atgtttttct
       61 tgcacaaacg ccatcaagaa ctcaatcaat tccaaagccg tcgccagttt tgacgtttcc
      121 ggcatcacac gcgcattggc cgatacggtt ttcgtaaacg catcggccag gctggccaac
      181 agcttggcgc ggtcggacgg gggcaaatct tcggtactcg aatcctgcag catcgtcatc
      241 gtgctgttgt actgcaccat aaaaccggcc aacatcgcac ggctcaagtc ctcaataccg
      301 ccgccggcca aagtgtaggc ggcgcgcatc ttatcccagt cgtcgccttt ttccttatcc
      361 gcacgtttcc acgcacgcgc agtggtctgc gggatttcgc acatcaaggc cgccgtttcc
      421 aaagtttgct cgccgctcac atagagccga cgtaactttt cacggatttc ttgcgggtga
      481 gccataatta cagtcccatt ttcgctttaa gcaattccca gccgaccgta atcacgccgc
      541 cgcccagtgc gccgaatgta atggccgtgc gtttcgtgtc ttggcggatt tgcgcaattt
      601 ccgcctgcat ttctttctga tttttcagcg tttgatcagt cttgttttca atacgcgcca
      661 aggcttccaa aatcgggtcg ctcatgattt gtctgctttc ctgtccagtt tttcgtttac
      721 tttttccaac ttgttttcga tgcgtcccaa cgaagccgca atattgtcgc ggtctgcctt
      781 ggcatcttgc ttggtgtgat aagagagctt gaccgcgtgc agctcctctt tcaggtcgtc
      841 gatacgcttg tccgcctctt tcagacggcc tgaaatgccg ttgacccaaa accaaaatgc
      901 cgccgtcgca atcggccaca gggttctgaa accaaattca aagtccattt aaaacccctt
      961 taaaccggca catcgccgaa tacgatacgg acggcgtaac cgtcagggcg attgctggca
     1021 atctccagtc catcaccatc attacaaaca cagtaatacg cccccaaagt ttgccaaacc
     1081 gcacgtttaa aggtgtcata gttcgtaatt ggatattcaa ggtgaaacgt cgtctgaaaa
     1141 tccttatcca tgcgtaccgc gtactcaatg cctgccttat ccaacagatc ggaaacatga
     1201 atgacaaacg gctcttgctc gcgtgcgcgg cttaagccca attccaaatc ggcatggcgc
     1261 acagccaact gacgttcaac taattcacgg taggtcattc tttgataccc attaaatatt
     1321 ttgtccgctt gtacaatttc ttaacccacg aaatatttac aaatgtataa acctttgcta
     1381 caacttcgcc gtcatagtgc gcattttctc gtgcagcccg aaatttcgcc ctggcttctt
     1441 cagggttgtc cgcccaaatg ctcaatgacc aggacttgcc gttaaagcgg taagaaaacg
     1501 tgtactcatt cataggagaa accttatgta ttttgaaatc tataaagacg caaaaggcga
     1561 ataccgttgg cgtttgaaag cagccaacca tgaaatcatc gctcagggcg aaggctacac
     1621 cagcaagcaa aactgtcagc acgcagtcga tttgctgaaa agcactaccg ccgctacccc
     1681 tgtaaaagag gtataaaatc cgctttcacc ctcagcccgc gccctacgcg ggcttttttg
     1741 tcagtttccg actttgcggg agtgattgcc cgcccagtcg cgccaagcct gattttgatt
     1801 ttccaactcc gccacatagc cgccaaactc ggcggcgtgt tccaacagcg tggccgtctt
     1861 gccgtctttc ggcggatttg ggcgtaccgg cgcgaccatc aatgcggcag gcggtgtcgg
     1921 catgaccgcc ttttcgacaa ccttaatttc cgtagccgag ggcgcgcttg tagagctgca
     1981 agccgtgatg gccaaagccg tcaatacaac cgccgcctgc atttttacgg tcttgagtaa
     2041 ggacattttc gatttccttt ttattttccg ttttcagacg gctgacttcc gcctgttttt
     2101 tcgccaaagc catgccgacg gcgtgcgcct tgacttcata ttttttcgct tccgcgcgcg
     2161 cctgttccag ctcgcgtgca tagttttgag ccgacaacag catggcttgc gccttgtcgc
     2221 gcttcatttt ctcaatgacc acctgctgct tcgcaaacgc cgacttatag ccttgatggt
     2281 gcgacaccgc caaacccgtg ccgacaagcg cgataatggc aattggttgc cagttattcg
     2341 ctagcagttt cacgagattc attctcgacc tcctgacgtt tgacgctgac caacgaacgc
     2401 gccaccgcat agccgccgac aatgcccaaa tacaccgccc aaatctccgc cgatgggtcg
     2461 ggcaacatca caaatttaaa cgtccccgcc gcgcaggcga cgtttgccca cagcttcgag
     2521 tgcgacacat tgcctgtcgc cgggttttta aaaatatcca aaatacgcat tgctattcca
     2581 cacttttggt ttgcaggtgc cgtttcagca tttcctgata attggccagt tcgccctccg
     2641 caaattcaaa cgccgccaag tctgcctgtt cgcttgcctc acggcttttg gccgaccaca
     2701 gcccaatcat cttttcgtaa aacgcaacct gtcccatgat taacgacgat tcttgcgttt
     2761 gcgcgcagcc cgtttcgcgg ctgccacgcc tgagtttctt aaatttgggc gtggataggt
     2821 atgtatcgga cgaacatttg gcatctgtat aagtgcgcgg tttacctgct cattactagg
     2881 attttctcca atcaattttg taagaaaata ggaagcagct tctttcaatt taccaataat
     2941 attcatactc ttgccgcccc caatttcatc gcaatcgcgt ccgcaatcgc gcggcagatg
     3001 ccccatttgg tcgtcttaaa caaggccaaa tcagtgtcgt tgctgatgaa aaaaggctca
     3061 acaatgccgc cagcctgcgc ataagccagg cgcgaatgat ggcccgcatt gtcgggttta
     3121 aagccgtctt cgccgcgcag tttccagccg gttttcttgg caacagcttt gctcaacacc
     3181 tgacaccagc gtttgttttt aacggtactc aacgcctcaa tgcccgtagc tgctttaccg
     3241 gccgccgagt tggtatggaa ctcaatcgcc acatccgagc cgcgaatcag ttttacagct
     3301 tcacgcagcg gcatattgcc tttgcctgtg ccgtcggttt taacagtcaa accgtagtca
     3361 tcgcgcaaaa tagcagccac aatgttgcgc atatcctgcg ccaagtccgc ctcacggtcg
     3421 ctgccgttga ccgcacccgg gtcggtgttg ctgtgtccag cggttaaggt tacggttttg
     3481 cccattcatc atctccaaaa aatattgatt gcatatagtg gattaacaaa aatcaggaca
     3541 aggcgacgaa gccgcagaca gtacagatag tacggaaccg attcacttgg tgcttcagca
     3601 ccttagagaa tcgttctctt tgagctaagg cgaggcaacg ccgtactggt ttttgttaat
     3661 ccactataac atttgaaaac cccattaaac cgtctttaac ccatcgtccc gaacggtaga
     3721 tgtttcaccc ctgcaaacca aaaaaaagac cgtctgaata cagacggcca aagcctggtc
     3781 acacatcact gcctaaaata aagctgcctg ctgtgccgca ggtcggctca tttcattgat
     3841 aatcgtatat cccgttcgtg aagagatgcc gtatttaggg catagcttcg tcatcgccat
     3901 aagcccgctc tccttatcaa tatcgcgcaa tttgacaaac tcctgataaa acctatggtt
     3961 tctcaactgt attaacgcct tgccgcaccg tgggacatac aattcctcgc caccatatac
     4021 ctgcaacagc tcatgtgttt tcacttcgcc gatggcttcg accaaaattg ccaaacgctc
     4081 ggtgtccacc ttgcccttac caaatttaaa ccgcgccccg ccaatcgcct tgaccagctg
     4141 ttccgtcgct gccagtccga tgacatccac aatgtccaac acggtatccg gcaataaatg
     4201 ttcaactttt tcgaacccca tcatccccac ccgctttttc cgttttcctg ttttccgcaa
     4261 tctgcaacgc agcaaccagt ttatgtagct gcgtatcgtc taaatattcg accttatcct
     4321 taccaaacat ccgccgcgcc attgcgtgtg catagttcca atgtttgccg ccgacggtca
     4381 gcagggcttc gactttgtcc aacattgccg ctgatgatgt ccgacgcaga tgtggtttac
     4441 cgtgtgggtt accttttgct ttaggcttaa atccgtgcga ccgcatatca gcgacaacag
     4501 actcaagttc ggaaacatcc atatccgcac acgaccgctt gcccgtcacg cgctccaaca
     4561 ccgcgcgata ggtaccgtcg tccaagccca gctccttttg ggcaatttta atttttgcaa
     4621 tcaacgcccg gcgcatctca aacccataaa acacaatata ttgactaatt aacgcatatt
     4681 ataccaataa aatacaatat atagtattaa gccgatgttt tttgcgaaac ggacagacat
     4741 aaaaaatgcc gtctgaaaac gagctttgcg agtttcgcca aaacgtttca gacgaccttt
     4801 tttactacaa tctaatcact gtctttttcg cgccgttgct tttccaaggt ttgcgcttta
     4861 cctctgttga ttcctgcaaa atatcccaaa gctaccgccc cgccgatttt gacaatttca
     4921 atagcgacgc tgtccttatc gcgccataac gcagtaatca gcacggcggc aatcagaaaa
     4981 gaaatagcaa tcacggcatt cagacggcgt ttgtgtacct ctttgaaaat ctcaccatgt
     5041 tgctgttcac cctgtttttg cgcttcgatg gtagccagtg caatgcgttc gtgagattgg
     5101 atttcgtcct tacggctttc caactccttc tgtttgactg caatatcctg tttttgaagt
     5161 tctaaaaact cctgaagcat tttctgctgc tcatcggccg gcagattctc ggatttttcc
     5221 ccgctcataa atcaaccgcc actaaggttt tgtaacggac tttgaatttg ccgtaacccc
     5281 gagcccctat tttcggcggc acaaattcca cggacgcaat attgcccgtc ttacggtctt
     5341 tacggacttc ttccaaataa tcggcagcat tgagcagccg ttcgcggact gccgtatatt
     5401 ctttgacggt attcattttt caacctcgcc caaatagtgc aaatattagc atatgggatt
     5461 tatttttcaa gaaaatcaaa tccatataaa acaaccgtat aatattttaa tactatatat
     5521 ggtaaatttc ttctaaaaat acacactaaa ataccatatc ttgataaccg caacgccgca
     5581 caaatggcag ggcattgatg cccgacaaca aaaaatgccg tctgaaacag cattcgagct
     5641 gttttcagac ggcatttttc tttgattttg ttggggaaag ggttgacttt taacgtgtcc
     5701 acgtttataa ttcaattcat cggcgtagtg agggccgata cgggaaaagc cccaccgaag
     5761 cggggctcaa ctgggagaaa gaagatgaat aaacgcacta ttcaaattct catcttggtc
     5821 gcagttttca tgttggcaag tgctaatgcc tactaaagac tgaccagctg ggggcggtcg
     5881 ccgctgtccc cagtcccaat cttacaaaat acggtttaaa aaatcaagga gtttgcctat
     5941 ggttgatgaa aaactggcag aaaaccgaaa gcgttacgag cagaaacggg tgattaagaa
     6001 agtctcgttc aatgccgaaa cggaaaaaga acttttggaa tatgcccaaa atatcgattt
     6061 ttcccaatgg gttaaatcaa tcatcaaaga aaaaatcaaa aaatagcttg actaaattct
     6121 agaaatacta gataatacgc ctatctgata aagcaaagcc ccgaagcggc aacttcgggg
     6181 gcttatcgga tagaaaggag gcttgtggaa atgacaaaac tggcgaaagt tgtttttttc
     6241 atcattctgc ttttaagctg tagtccggct tactaagcaa gttgattaaa cacaaggggt
     6301 ggcagaacac cgcgcccctt tcgccaacct ttctgcaagc cattttacta caacgatttt
     6361 aaaaatcaag gattgcctat gcctgatgaa aaaacgctaa aagcaaaaca agctgaatat
     6421 cagcgaaagt atgaccaaaa gcggctgatg aaaacagttt ctttccattt ggaaagagag
     6481 aaagagttgg tggattttat gcaaaaagaa attcccgact tttcaaactg ggttaaatca
     6541 gtcatgaagg aaaaaatgaa ataagaaaat tccgccgatg ggaaaacatc ggcggaacag
     6601 gtggaaagca gagcagcaac tctctttatg tagggcatga aaaaaggccg tctgaaacag
     6661 gttttaaacc ccatttcaga cggctttttg ttgtaataca tcttgattaa aatggttttt
     6721 agtattacca taatcgtgtt ttaaaaccta tttaaaggaa gattatggac tcgattaaaa
     6781 aggctcaaga aaaatacgca ctcaagcgag tagtgaaaac agtatcgttc aattccgaaa
     6841 aagaacttga tttaattaaa ttttctgaaa atttagattt ttcaaactgg gtaaaatcga
     6901 aaattagagg agatatggaa tcggaaaaat tcaaaaaaaa agcaaaaaag aatattgaca
     6961 aatagaatta ccataattta aaatttccat atcttgtgca acacaagata tggaaatccc
     7021 cgataagtga cagcttatcg gggatagtgg aaaagcaacg ttagagcgtt cttttccttg
     7081 tcatctcaac cttgaaatga aagataattt taccatgaat acccaactca tcccaactgt
     7141 ttcaggtcaa ttggacaatc aaacacaagc actggttgat gctcatgacc tgcataagtt
     7201 cttaggtgtg gaaacaccat tttctaaatg gattcagcgt cgcattgaag aatacggatt
     7261 tacacaagcc cttgatttta tcggcgtgga caaaattgtc cgcaccgaag caggtttctt
     7321 tggacagcgt gataaaactg ttcaggggta ttatttatcc ctcgacatgg caaaagagct
     7381 gtgcatggtg gagcgcaacg acaaaggacg ccaagcccgc cgatatttta tcgaaatgga
     7441 gaaacaggca aaagccctgc ctgatgccgt gctataccgc atcgatgcat tggaagacgc
     7501 ctatttccaa gccgcgcccg aaatgctcgc gctgctacgc taccgcagta tgggcttgaa
     7561 cctgaccgaa ataggcaaac tcttggacat gaaccccggc gcggtttcct accgtctcaa
     7621 aaaactcaac gatttgggtt tcttggaata tgtccccaag cccaaaatgg tggtgcaaca
     7681 acagtctttg ggattggagg gttaagccat gaataccacc tataccctga ctttcgacca
     7741 agacagcctc aaagccctga atctgctggt gttcacactc aaccatctga aagttttgga
     7801 gatggacatg gaaggaatcg aagacggttt gtctgccgtg attgaaaccg cctccgagaa
     7861 agccgacaag ctgtccgccg ctttctacaa cgccgtgtac gagcaggaag agaaagcagc
     7921 ctgaatctag ggcatgaaaa aaggccgtct gaaacaggtt ttaaaccccg tttcagacga
     7981 cctttaaatc atgggttaaa gcctatttga accggctagg caagctcctg ctccgtaggc
     8041 tcaatcacgt ttcaacacac tgaattgaaa tcaggctgtt gattttatag aatttgttcg
     8101 ctcggctcaa tcacaaaatc ctccacgccg ctcacaatct taatccccgg cacttggccg
     8161 tctgaaaaac gctctttttg attcaggatg gcgtctttgt cgatttcctt tttagtgcgg
     8221 acaaactcgg caaaggcgga tttttccgag agccacgcca agacggcggc cacgcccgtt
     8281 accttgacgg atggcggacg gatgcgccat ttaatcaggc cggtagtaaa gtccacggtt
     8341 ttggttttac cgttttccgt cagctcgtcc ttatgtgcct cgcagtatgc ggccacacgt
     8401 tcggtcaggc tcatgatttc ggcacacatc ggcgcggctt gggcggcata ttcttcttcg
     8461 atggccgctt ttttgtctcc ggcttcggtt tccaggcgtt tgacttcgcg ctgcaagtcg
     8521 ccgatttggc ggataaatgc agtaacttcc gttttgtctt gtgccgcttc gatggcgggc
     8581 tgtttgattc gggttttagc cattttctct tcctttcagg ttgggtttaa catttcggct
     8641 tactcaagcc ttgttcgcgt tcgtgcttgg caagtgcttc aactttcgcg cggtttctca
     8701 aaaacttaaa catcacactt cctcccataa agttatcgcc tgagccaaag tttccgcctc
     8761 ggcagtcttc cacatcccgt ccggcgcacg cgctgcaatc acaaagcctt cgccgtcctt
     8821 cttcatgacc atcagctcgc cacggtcttc gagccattcg attaaatctt tttcattcat
     8881 ctttgtttcc ttccgttttc agacgacctt tgccgtcctt atcttcaaac tgcgcctgat
     8941 attcggcgac ttcctgctcg cggtttcgct tcaccataaa cttcgtcgca cgcctgcggt
     9001 gttgtcccca agcctgccaa tccgtattac gtcgtccgaa actcatttca cacatccttt
     9061 cacaatcgcc ttatcgccat atttcgcgcg gatttccttt accgcccgtg ccaaagcctc
     9121 ttttttcgcc gcagggctca ataaaattgg cttatcactc ataaacaatc cctttcattt
     9181 tttcctcgac gctcattgac tcgtattgcc cttcccatac cttgacctcc aaatccgcct
     9241 gtctttccat cgcctcaacc ttcgtcggct ctttcgcaac cggttcgggt tctttcgcgc
     9301 aggaatgcaa cgccattccc gccacaaaac accacacgcc caccgtcaaa ccaaccggca
     9361 cccaacgcca aaaagagcgc gccacaaaca tcttccaatc aactttcttc aaaacttgca
     9421 ttttgcgttt tccttttaaa acaacaactt attaaaatca tagggtaaaa aaatatatag
     9481 ccctgtcaga gacttaccgt ttcagacggc ctatcggata atcagggagc tgtatttctt
     9541 aacgataccg gcctgcatct tgataccgtt cttgttcgcc gtgcgtaccg cgccgcgcat
     9601 caatttactc atccggcgcg tattgccgtt actatgttta accagttcca agagcgtttc
     9661 ttcgtccgca tcaggcaaag ccgctttcgc aatctcaaag agttcgtcat ccggcaaaga
     9721 ttcgcccaaa ttcagcgcaa cagacacgcg gctataaagt tgcaccagct cgccatgctt
     9781 accgcgcaaa ttcgcaacca gtcggggcat accgctcaac accaaaccgc agcccgtttc
     9841 atcatgcagt cggcggataa tctcaagggc gcgcaagggc aggttttccg cttcatcgac
     9901 cacaatcaga cggcccgaat cgcgcaggcg gtcagataca gactcaaaca aatcattcag
     9961 gctgcccatc gccgatacct tcgccgccgt cgccaacttg cgcatcagta ccaaagccgt
    10021 aaagctcgga ttagcctcaa tcaagatagc cgcagggttt ttctcgcagt agtttttgac
    10081 cgactgcgtc ttgcccaaac ccgcctgacc gtagatcacc accgtttcgc cgccttcgtg
    10141 cgcatcgcgc atcacttccg cgattcggcg tgtcgtctta gtcgatacaa atcccaacac
    10201 cagctcttca cgtcgcgcct tactgtcctc catctccaaa aacgcctcga ttttcgtctc
    10261 gatggtttca taattgccgc ctttatcggc ataagtgccg ttcagataca tactgatgga
    10321 ggccggcgaa gtatcgatac cgcgtgccag ttgggtttgg ttcattcccg atttttcttt
    10381 aaattcaacc agtttttgtt gcaatgcttg attaatttgt ttcatttttt tagtcctttt
    10441 aaaagaggtt taaaaccgtt ttaacttcta tccgtctcaa atagcacaaa atcgtccgtg
    10501 cccgttttcg gcaataccgc atactccgcc tcgatgacgt ttccgcccaa atgtcccagc
    10561 tcgtcccaag ctgccgcctg ttccagtgcc ggattgactt ccgcatttgc gagcttgatt
    10621 gcattttccg cccgcttgat tttgcctttt cggcggtttt ccgccagttg gtcgatacgc
    10681 gccgtcggga aagcctcgcg ggtattgccg tcggcctgcg ccttagtgat aaacttgccg
    10741 tccatatcaa acacattgac caccgacgca tcgctcaaat cgtagctgac ccgtacctcg
    10801 tccttgtgat actccgccag ctcggttgag aaataagagt tgttgaacaa atccagccaa
    10861 ccgcgctgta cctttcgcac ctcttgcggc ataaacatcg tcgccagctc ttgcgccgac
    10921 aacatatccg gcgcgatacc gtcctgttcc agcctcattt cccgataagc cttcggcgta
    10981 taatgcccgc cgtcaggatg tcggggcagc tcgccgtgcg ggcggttgtt gtattcgtcg
    11041 atacacttga ccacatccgc gataaaacgc gaccagctcg gcagtttttt caaatatttc
    11101 tgttgttcct ccgttaaatc cttgcctttt tccaaagcat taaacgcact ttccatcttg
    11161 cggtacatca ggttcttcgt actgctgtcc attcctgcgc ccgcaaacgt ctcatactgg
    11221 cgcgccatct caatcagatt gtctttccac catcgctcaa tgatgccgcg tccttgcggg
    11281 ttgcccacga tacccgtttc atgccggata cccaatcggg acgtaatacc tgtgatttca
    11341 tggtctatcg tcttgccggt ttggccgccg ccgttatccg agtaatagat aatcggcaaa
    11401 ccaaaatgct tgaccccgat acgcagagcg tccgataccg ccacacaact ttcagcaaga
    11461 gagaccgaaa acccgaccac aaaccgcgta caaccatcaa taatcaccgt cacttccggc
    11521 ttaaacggcc tgccgtgtac agggtgcgcc accttcgcct taaagctgtg gccgtcgccg
    11581 atccaaacat cgttcggctt caaagccccc caatcacgtt tcacataagg cagcagcgat
    11641 ttataagccg cccccgtttt cctgccgcgc tcctgcataa tcagcggcag cttgtcccaa
    11701 acgcgacgca ccatactcaa attaggcaca tcattgaccg gcatattttc cgcttcagcc
    11761 cactgcacaa atcggcggta actgtgcgcc agcttcggag ctgaagggat gttgtgaaac
    11821 tgcataaaca tcggcaacca accgtagctc tcaatcggct tgaccgcctt cgtcgtcttc
    11881 ggagccaaag caaccaaccg ctccgtcgcg ttttccgctt tcaaataagc agaaatccag
    11941 ccgtctaaag tacgttcgcc aacctttgcc gtccggctgc ggtcattggc cttttccaag
    12001 ttcccaagcg tgaccgcgtc caatttactt tctgccagca agcccaaaaa ctgagccacc
    12061 gcagcctttg cagagcaacc gtattggtat ttaatcccca ataccgccgc caccaccgca
    12121 catcgcgcat tcgccaccga ccgttgtttc tcgttcaaca gcttggccgc ttcagccagt
    12181 gcctgagccg acatcgccgt ccccggtctg acttggggca gcattttcgg catcttctcc
    12241 gccagctcgt ccgactgccg tttcatgatg gctgctcgga tttcggcagg gagggcatat
    12301 tcaacaccac cacccttacc ttgacgcctt ctcgtttgcc aaccatccct ttgcgctttt
    12361 tttctcagcc ctattactgt tcttggcata tttggcaacc caaaattaag caggcttttg
    12421 aggtccatat atttcatttc aacccactcc gagcatctct ttcaattcag ctatcttttt
    12481 gtctcgacaa tctgttttct tgtaatgcgg aaaaacttca actaaatctt tttgaatcac
    12541 tttcgcgatt gcttccgcaa ttcttttgct tcctcgtcca tttcttatga cctcagaaac
    12601 agattggtta gttaccccta aagccgaagc caacattctt gccgatatat ttttttcttc
    12661 taaggattta tagatttcgt tcgcttgcat aatgcctcca tgatagaatc cattacttac
    12721 cttacaggct ttaatgcctg ccttaactgt tacttggatg atatacacaa aatatttggt
    12781 ataccaaata tatttggtaa tattttgcga tgtttttatg gaacgcattg atttagcatt
    12841 gaatttagtt gaagagagaa gccgacttgg atactctcga aagaattttg ctgagcaaac
    12901 tggatgcagt gcagaaagtt tgagactgta tgaaagcggg caggtcaaca ttcctgcgga
    12961 ctttttactt gctgctgtcc aattaggggt ggatattcaa tttgtcttta caggcattca
    13021 ttcggcaaat ttaaatgctg tttcagacga ccttaataaa aaattggacg acgctattgg
    13081 caaatcaaac gttgagaatc agattaacgg caacgtcagt aacgctgtta tcgcctcatc
    13141 tggttcggtt gttcatcaaa ttaataccca aaatcacgtc atcagaaccc gtgtcgattc
    13201 aaaacccggc aaggaacata taacgcttga gcaagcttca aagctgcaac aacttgttaa
    13261 acaagttgcc gcagcagaag agattgccaa acggtcgcca aaatcaatcc gtgcaatttg
    13321 ggctagtctg aatgctcact gtaaagttcc aagttacaaa ctaatcgcat tgagcgatta
    13381 cgacaaagca gaaacttatc tcagaaaatg gctgggtagg ttgagcaata cagcaacatc
    13441 aaagaacaac gatcccgact ggcgaaaaaa gaaatacgct tatatcaaat taaatgtaaa
    13501 acagcttgag cttgaagatt ggttgaaaag ttacctcgaa aaaaatttct cagtagaaag
    13561 cctgactgaa ttaagtgatg aagatttgca aaaaacatat gcagcagtat cgactaaaaa
    13621 acggaaaaaa taggcttaaa catgaaactc cgcctttaaa ttcaagtttc atgtttagct
    13681 tatggtcttc agatgctttg tttttttaga tgtatgatat taaaagattt tttcaaacat
    13741 ggaactatta tacaagttcc atgttcagtt tctagttaaa gccttttata aacattctaa
    13801 tcaaccacgc cgaaaccgag ccgcgcgacg gcctatatgt cttgcgtata ggcaatgacc
    13861 tctttgtcaa acgtgtgcaa cgtataccgg gcaaactgct tgtaacgtct gaaaatccac
    13921 gttacgcacc gtttgaaata gatttgagta atacccaaga cgacatcgcc atcataggcc
    13981 gtgttgagtg gtatggccgg agtattcccc acaggaaaac gtcgctctgt tccgccacaa
    14041 cggcgaaatc ctgttgagcg gcatcaacat caaactcaaa aacggcaact ccctactgat
    14101 acgcggcccg agcggttgcg gcaaaacttc gttgctgcgc gcgctggcgg ggctttggcc
    14161 gttcggcagc agcggcaaag tcagccatcc gccgcatcaa gacatcctct tcctgccgca
    14221 acgtccgtac acggcacaag gcagtctgcg cgatgcgatt tgttaccctg ccatcgacaa
    14281 acaacatccg gaactgatcg aagccatgaa tacctgccga ttaggttatc tggttgataa
    14341 attagataaa accgatgact ggcaacacaa actctcccca ggcgaactgc aacgtgttgc
    14401 cttcgtccgc gccctactct cgcagcccaa agtcatcttg ctcgatgaag ctaccgccgc
    14461 tttggacgaa ccgaccgaag ccatgctcta ccgcgcctta aagcaaaaac tgcccgacag
    14521 catcatcatc agtatcggcc accgcagcac gctcaacgcg ttccacaata tgcacctcga
    14581 tgtcggcaac gttgcctgcg gctgaacgat gccgtctgaa gccgttttca gacggcatcg
    14641 tcaaattgga aaggcgcgcg aaaacaacgt acaataaacc tatctgccaa cctctgaaat
    14701 gctgcaccgt gaaccagctt atttttgatt ttgccgcaca cgactatcca agtttcgaca
    14761 aattcctcgg cacggaaaat gcggagctgg tctatgtcct ccaacacaaa cacggacagt
    14821 ttatctatgt ctggggtgaa gaaggcgcgg gaaaaagcca ccttttgcag gcatgggtcg
    14881 cacaggcact cgaagccggc aaaaacgccg cctatatcga tgccgcctcc atgccgctga
    14941 ccgatgccgc gttcgaggcg gaataccttg ccgtcgatca agtcgaaaaa ctgggcaacg
    15001 aagaacaagc cctgcttttt tccatcttca accgcttccg caacagcggc aaaggctttt
    15061 tgctgctcgg ttcggaatac acgccccagc agcttgtcat ccgcgaagat ttgcggacgc
    15121 gtatggcata ctgcctcgtt tacgaagtta agcccctaac cgaccaagaa aaaatcgacg
    15181 cgctcgccag tatggcggcg gcacgccaag taaccgttga ttccgaaatt ttcgaatacc
    15241 tgctcaaaca ctggcggcgc gatatggaca gcctgatgat gatgctcgac acgctggaca
    15301 actacgccgt cacgatgggc aaacgcatca ccctgccgct tttgcgccag cttttgaaac
    15361 aacaggaaac ccaatgaaaa acctcgccat cttcgacctc gacaacaccc tcatcaacac
    15421 cgattccgac cacgcctggc cgcaatacct catcaaaaaa ggcttggttg acgctgccga
    15481 aaccgaagcg caaaacgaaa aattctaccg cgactaccaa aacggctgcc tcgacatcga
    15541 cgcattcctc aaattccacc tcgccccgct cgcccgctac agcaaagaag agctggcgga
    15601 atttcaccgc gaatttatgg cgaaatacat catcccccac atctcgccta tgcagcgtat
    15661 gctggtgcag agccaccaaa tggcaggcga cgaaaccctc gtcatctcct caaccaacga
    15721 gttcatcatc acccccgtct gccacctttt cggcatcacc aacatcatcg gcacacaact
    15781 cgaaaccggt tctgacggcc gctacaccgg caattacatc ggcacgccca gcctcaaaga
    15841 aggcaaaatt acccgcctga accaatggct tgccgaacgc ggcgaaacgc tccaaagcta
    15901 cggcaaaacc tatttttaca gcgactccag aaacgacctg ccgctgctgc gcctcgtcag
    15961 cgaacccgtc gccgccaacc ccgatgccga gctggaaaaa gaagccaaag aaaaaggctg
    16021 gccggttttg aatttcaaat gacgcaatgc cgtctgaagc ccgattcggc gttcagacgg
    16081 cattggggct gaaatcccaa aaactcaaag ccacaggaat ttatccggaa aaacaaaaaa
    16141 cacaggaatt catcgggaaa aacaacaatc tttccaccgt cattcccacg aaagtgggaa
    16201 tcttgatccg tccgcacgga aacttatatt tcgtcatttg cacccgacat aattcaatac
    16261 tttattttgc aataaattaa cggatgctga caaattagat tggattaatt accctattat
    16321 ccatattggg ttatcgggtt gctaattgag cagagcgtag caaaccataa agtgagtgtt
    16381 tccacccact ctgcatttac tatgaagtgg ttattaaata tgataatgag acctattaaa
    16441 tttagtatgg taaatacgtt attatttatt gttatatgta gttcattttt tgatctgctc
    16501 gttcaattat gtacaatttt atttcatagc caaaaaatat actttattac attattttta
    16561 ttatttattt ttaattttgt tacaaaatct atctatatgg caattattta tcctatttta
    16621 tattttttta cgataaaaaa atattatcct tactctagga aagtgataat tctattatca
    16681 ttagcattat ctatatattt tagttttatg gacttttact ttttttccat atattcagat
    16741 aaccttagct atgaaacgga gcctttacat ttatacatcc ctattattat taattttttc
    16801 tcacttttag tttctaattt tattttatct tttatcaaca agtaaatgta tatacaaact
    16861 acaatccaaa agatcctaag caaaccacca atcccacacc acccttaccg gttcaaatcc
    16921 gcacaaaaac ccacatcccg tcattcccac gaaagtggga atctaggacg tatagtggat
    16981 taacaaaaat ca
//
LOCUS       DBBZYD010000041        16977 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.041, whole genome shotgun sequence.
ACCESSION   DBBZYD010000041 DBBZYD010000000
VERSION     DBBZYD010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16977)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16977)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16977
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.041"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(197..1366)
                     /gene="metK"
                     /locus_tag="ACJJDL_001114"
     CDS             complement(197..1366)
                     /gene="metK"
                     /locus_tag="ACJJDL_001114"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HGG7573838.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1549..1659)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1712..2608
                     /locus_tag="ACJJDL_001115"
     CDS             1712..2608
                     /locus_tag="ACJJDL_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG7573839.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2652..3716)
                     /gene="tsaD"
                     /locus_tag="ACJJDL_001116"
     CDS             complement(2652..3716)
                     /gene="tsaD"
                     /locus_tag="ACJJDL_001116"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HGG7573840.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     GKPVIPIHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGSMTVQIPTPTGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVK"
     gene            3723..3848
                     /locus_tag="ACJJDL_001117"
     CDS             3723..3848
                     /locus_tag="ACJJDL_001117"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573841.1"
                     /translation="MPLKTEKRILADFGTTAVSQKRNMPSEDRSDGIVAPYQSVP"
     gene            complement(3833..5020)
                     /gene="ccsB"
                     /locus_tag="ACJJDL_001118"
     CDS             complement(3833..5020)
                     /gene="ccsB"
                     /locus_tag="ACJJDL_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HGG7573842.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRTEGKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(5013..6965)
                     /locus_tag="ACJJDL_001119"
     CDS             complement(5013..6965)
                     /locus_tag="ACJJDL_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HGG7573843.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7242..7865)
                     /locus_tag="ACJJDL_001120"
     CDS             complement(7242..7865)
                     /locus_tag="ACJJDL_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7573844.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            8071..8700
                     /gene="yihA"
                     /locus_tag="ACJJDL_001121"
     CDS             8071..8700
                     /gene="yihA"
                     /locus_tag="ACJJDL_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HGG7573845.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8821..11217)
                     /locus_tag="ACJJDL_001122"
     CDS             complement(8821..11217)
                     /locus_tag="ACJJDL_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HGG7573846.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11369..12484
                     /gene="pilM"
                     /locus_tag="ACJJDL_001123"
     CDS             11369..12484
                     /gene="pilM"
                     /locus_tag="ACJJDL_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HGG7573847.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKLLYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12487..13086
                     /locus_tag="ACJJDL_001124"
     CDS             12487..13086
                     /locus_tag="ACJJDL_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HGG7573848.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            13087..13734
                     /locus_tag="ACJJDL_001125"
     CDS             13087..13734
                     /locus_tag="ACJJDL_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HGG7573849.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13752..14297
                     /locus_tag="ACJJDL_001126"
     CDS             13752..14297
                     /locus_tag="ACJJDL_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HGG7573850.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14316..16601
                     /gene="pilQ"
                     /locus_tag="ACJJDL_001127"
     CDS             14316..16601
                     /gene="pilQ"
                     /locus_tag="ACJJDL_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HGG7573851.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAATPAKQT
                     NIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKT
                     PVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKT
                     FTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQ
                     ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS
                     ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQV
                     MIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINL
                     PITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP
                     FTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTIL
                     CISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDR
                     RELLIFITPRIMGTAGNSLRY"
BASE COUNT         4587 a         4817 c         3850 g         3723 t
ORIGIN      
        1 aatttaaacc agtacagcgt tgcctcgcct tagctcaaag agaacgattc tctaaggtgc
       61 tgaagcacca agtaaatcgg ttccgtacta tctgtactgt ctgcggcttc gtcgccttgt
      121 cctgattttt gttaatccac tatataaaaa tgccgtctga actgttcaga cggcattttt
      181 gattttcaaa ccggaattac agccccgctg ccgccctcaa tgcagcagct ttgtcggtgc
      241 gctcccaagt gaactcaggt tcttcgcggc cgaaatgtcc gtaagcggcg gatttactgt
      301 aaatcgggcg caagagatcg agcatttgga cgatgccttt ggggcgcagg tcgaaatgtt
      361 cgcgaactaa ggtaatcagt ttttcctcgc tgattttgcc tgtgccgaaa gtgtcgatgg
      421 aaatcgaagt cggttcggca acgccgatgg cgtaggaaac ttggatttgg cattgggttg
      481 ccaaaccggc ggcgacgatg tttttcgcaa cgtagcggca ggcgtaagcg gcggaacgat
      541 ccactttgga cgggtctttg ccggagaacg caccgccgcc gtgcggagcc gcgccgccgt
      601 aggtatcaac gatgatttta cggccggtca aaccgcagtc gccttgcggg ccgccgatga
      661 cgaagcggcc ggtcgggttg atcaggtatt tggtttcgtc ggtcagcagt tcagacggca
      721 ggacgggctt gataatctgc tcaatgacgg cgtttttcaa ctcttcataa ccgatttccg
      781 ggtcgtgttg cgtagagagg acgacggtat caatgcgttt tactttgccg gattcgctat
      841 cgtaaaccac ggtcagttgg gcttttgcgt cgggacgcag ccaaggcagg aggccgtctt
      901 tgcgtaattc gctttgacgc tgcatcaggc ggtggctgta atagatggca aacggcatca
      961 gggtcggggt ttcgtcgcag gcatagccga acatcaaacc ttggtcgcca gcgccttggt
     1021 tcaagtcaat gccttcgcct tcgttcacgc cttgggcgat gtccggagat tgctggtcgt
     1081 agtacacgcc gaccgcgcag ccgttggcat caaagcccag ctcggaggag ttgtagccga
     1141 tgcgtttgat ggtttcgcgt gcgactttga tgtagtccac ttgggcggtg gtggtgattt
     1201 cgcctgccaa tacgcacaag cctgtgttga ccaaagtttc tgcggcgaca cgcgctttgg
     1261 ggtcttgcgc caagatggca tccaaaatcg cgtcggatac ttggtcggca actttgtccg
     1321 gatggccttc ggataccgat tcggaagtaa acagatattc gctcattgag attttccttg
     1381 aaaaacaaac catcttcttc agacggcatg ttgtatgaac ataatgtcga cagcgggaaa
     1441 tatagcaaaa tttccctatt cataccattc agttgagaaa tattcccatt tgaatggcac
     1501 tttggaatct ctgcccgtac gtttcttaca ggcaaaaaaa ttcccgcatc aagcgggttt
     1561 ggattgctct ggtgagccac atcggctttt caaccgtcca ccttactttt ccttttgaaa
     1621 agcaggttgg catggaattc ccaactctta atgcagcgcg gatggtagca gaaaagcctt
     1681 tccgccgcaa tacttccctt tttcagacgg catgtttcgt ttacaattcg ggctgtttcc
     1741 ccctttgcga accgccatgc acatcctgtt gaccgccctg ctcaaatgcc tctccctgct
     1801 gccactttcc tgtctgcaca cgctgggaaa ccggctcgga catctggcgt tttacctttt
     1861 aaaggaagac cgcgcgcgca tcgtcgccaa tatgcgtcag gcaggcatga atcccgaccc
     1921 caaaacagtc aaagccgttt ttgcggaaac ggcaaaaggc ggtttggaac ttgcccccgc
     1981 gtttttcaga aaaccggaag acatagaaac aatgttcaaa gcggtacacg gctgggaaca
     2041 tgtgcagcag gctttggaca aacacgaagg gctgctattc atcacgccgc acatcggcag
     2101 ctacgatttg ggcggacgct acatcagcca gcagcttccg ttcccgctga ccgccatgta
     2161 caaaccgccg aaaatcaaag cgatagacaa aatcatgcag gcgggcaggg ttcgcggcaa
     2221 aggaaaaacc gcgcctacca gcatacaagg ggtcaaacaa atcatcaaag ccctgcgttc
     2281 gggcgaagca accatcgtcc tgcccgacca cgtcccctcc cctcaagaag gcggggaagg
     2341 cgtatgggtg gatttcttcg gcaaacctgc ctataccatg acgctggcgg caaaattggc
     2401 acacgtcaaa ggcgtgaaaa ccctgttttt ctgctgcgaa cgcctgcctg gcggacaagg
     2461 tttcgatttg cacatccgcc ccgtccaagg ggaattgaac ggcgacaaag cccatgatgc
     2521 cgccgtgttc aaccgcaatg ccgaatattg gatacgccgt tttccgacgc agtatctgtt
     2581 tatgtacaac cgctacaaaa tgccgtaacg aaaataaaaa tgccgtctga acaatttcag
     2641 acggcatttt gtcatttgac gatttccgac agcggccagc gcggacggac attgaacgca
     2701 ccgacctccc tgcccttgcc caggtgcatc gcaccggcaa aggcaatcat ggcaccgttg
     2761 tccgtgcagt atgccgtcgg cgggaaaaac acgctgactt tttcggacgg atgtttcggc
     2821 ttgcctgttg gggtcgggat ttgcaccgtc atgctgccga aagtttcacg gagtttgcgg
     2881 tttgcaccga ccccgccggc gaccactacg gttctgaacc ctgtctgcaa cagggctttt
     2941 ttcactttcg ccgccaacac atcgactacc gcatcttgaa acgcacggca gatgtcgttg
     3001 cgtgtctgct caggaatgtc atccgccccg ttttccgcgc gcactttctc gacggcagtc
     3061 aaaacagcgg ttttcaaacc tgaaaaactc atctgcaaat cgtcggaatg aatcatcggg
     3121 cgcggaaaaa caaacgcttc gggcctgccc gattccgcaa gttccgacag tttcgcaccg
     3181 cccggatacg gcaagcccag cagtttcgcc gttttgtcga atgcctcgcc cgccgcatca
     3241 tcgacgctct cgcccaaaag cgcgtagtcg cctatgcccc tgaccgccat aatctgcgta
     3301 tgcccgcccg aaaccagcag cgcgacaaaa ggaaagtcgg gtttttcctc cgccaacagc
     3361 ggcgacagca gatgtccttc caaatgatgg atggggatga cgggcttgcc caatgccaaa
     3421 gccagtgcat tggcgtagct cgaacccgcc agcagcgcac cgcccagacc gggtccctgc
     3481 gtaaaggcaa ccgcgtcaat gtcgccatac gatgcacccg cctgcgccaa acagccttcc
     3541 gtcaacggaa caaggcggcg gatatggtcg cggcttgcca attccggcac aaccccaccg
     3601 tattcggcgt gcattgccat ttgagtgtgc aggcagtgcg cccgcaatcc tcgttccgta
     3661 tcgtaaagcg caacgccggt ttcgtcgcaa gaagactcga ttcctaatac caacatggtc
     3721 tgatgccgtt aaaaactgaa aaacgtattt tagcggattt cggcacgact gccgtatccc
     3781 aaaaacggaa catgccgtct gaagaccgtt cagacggcat cgtcgcaccg tatcaaagcg
     3841 ttccgtaaga atgcagcccg ctcaaaaaca tattcacgcc gataaaggca aatgcggtta
     3901 cgaacaaacc gataatcgcc caccacgcca gcactttgcc gcgccaaccg gcaaccagcc
     3961 gcaagtgcag ccaaacggcg taattgagcc agacgatgaa cgcccacgtc tctttcgggt
     4021 cccaactcca atagcgtccc caagcatccg ccgcccacag cgcacccaaa atggtggcaa
     4081 tggtaaagaa cagaaagccg acggcaatcg ccttatacat aacttcctca atcaacacgg
     4141 attgcggcag ccacgatttc ccgccttttc cttccgtacg cagggaaacc agttcggcaa
     4201 taccgagcat cgcggaaatg caaaacgcgc cgtaaccgat aaagtttgcc ggaacgtgga
     4261 ttttcatcca ccaagattgc aatgccggaa tcagcggctg gatggtatgc gcctcgcggg
     4321 acacgctgta ccacaagaca aatccaacca cgaccgccat aaagccgaac acgaagccgc
     4381 ccaatttctg tatggcgaac ttaccttcat aataaagata catcagcgcg gtaatcacca
     4441 aaaacaggat gaacacttca tacaggttgg aaaccggaat atgccccgca tcgggacgga
     4501 gcagatagct ttcgtgccaa cgtaccagca gaccggtaaa gcctgctacg gcagacaccc
     4561 atgcaaacac ggttcccata cccaacagcg tgttggtcgg cacatttttt acgcttgcca
     4621 aaaccgcgcc cgaaatatag gcgaacaggg cgaagaagac aaaggcgcac tgccacataa
     4681 tcgccgactg gctgctgagg aaataccgca acaggaaaat ctctgccgat ttgatgttgc
     4741 cgccatacaa accgacggcg gcataggcaa gcaatacgct taaaggaaca aaccagcgca
     4801 tcggcttgaa aaaccagccc aaaaatacgg caataccggc actcgcccac aacatgaccg
     4861 tttcgtaaat gtccatatgc ataccggaac gggtctgtac gaaaaccgta gccgcaaaaa
     4921 ccagcacggc aaatacccaa tcccaaagat tcagattgct gatcaaagac ttctgaatca
     4981 gcagctcgtg ttccggaagg gttttatagt gttcagtcat gattcaagtc cttgccgagc
     5041 cgttgcagac tctcgacgtg ttttggaaat tccttctgca aatcccgttc gctgcgggcc
     5101 gaagacatgg caaaacggat tttgccgtct gaaaacaata cccacgcccg tttttcgcgc
     5161 acataaaaca tcaataccgt acccaatacc aacagcaccg agccgagata gaccaaaagc
     5221 gcacccgggg aacgggtcat ctgcaaaccc gacgaacgca cctcggaaaa cccatcaagt
     5281 tgcagcagca taggcgcggg atattcggtc aaacccgtgt acgcatccat actgtgcagc
     5341 aggaaacggt tccgcgcttc atcctgctgc cattcgggca agccgtaccg gcgtatggtt
     5401 tcatccaaag cagcgttcat cacgccgtaa agcatttcgt agaaataacc ctgcatctta
     5461 tcctgctgct ctttcggaat attggacgta ataaattcgt ccaatcccaa atagcctttt
     5521 tgtgcaaaga tgttcagcgt gttttccgca gccagcatga attgttcgcg gatttcggca
     5581 ggtgcgtctt tggttgcgtc ggcaaccaga cgtttgcgcc cttccccatc tttcaaaaac
     5641 tcgcgcaatg ccataaaggt gtccgctttc aactgcttgt ccaaggggat acgcagccag
     5701 cggtattgct gctgcaagcc gctgcgcgtg ccggtaatcc aaaaataatc ctgttcctgc
     5761 aaaaccggca gcatatagtt tttatattcg accgcctgcc ctgccgcatc acggatacgg
     5821 taaacaatgg aagggccgat attggtgtat tttttacctt cctgagtaac ggcgcggaca
     5881 tcgttcagcg tggatttcag gcttttttcc cgttccgcgc cctcgctcat gtcctccaca
     5941 ttcatagaag tgaactgatc gaactcaaga cgatatttgt gtttgccaat ttccaacgga
     6001 aactggtgta tggatgttgc cttcaacacg acaggctcgc gcgaagcatc acccaaattc
     6061 cacgccttga atgtcaaatc cgaaccgccg tcggcaaaac tcgcctgata aatcgtgatg
     6121 ccgtgcaagg tcaaaggatg gttcacgcgg atggtgcgct cgagtttctc accggttgcc
     6181 ttatccgtta cttcaatatc actggcaaaa tcgcgcggca tacccgtatt gtaaaaatcg
     6241 atatggaatt ttttcagttt gacttcaaaa ggcaagtcct gaaccaatat cccgttgtcg
     6301 gcattcagga aaaccacatc cgcactctgc ccctcggaaa tattgacgtt gcccctaaat
     6361 gagagattgg acgcacccaa aatactttcg ggcttgaaat ccttggcata aaccgcctga
     6421 ttgtccggaa caatccgacc ggtcagcata cccagtttca acagcaggtt actgtctatc
     6481 aacccgccca ggcaaatgac aatcaaagca acatgggcaa agatatagcc ccatttgttc
     6541 attgtgcctt ttttggcggc aatcagaacc gacccgtctt cacggttaat ggtttttccc
     6601 tgaaaacctt gtacttccag ataacgtttg gcaacctcgg gcgcaatttt tacatccaac
     6661 agcgaagaat ggcgcatcgc cgccagagat ttttctttaa ccttttcccg aaaagacttc
     6721 atttcgcgcc agaacggcgg cacattgcga atcaggcaca aactggtaga aaccaccaaa
     6781 aacatcatga taacgacaaa ccatgccgaa gcatagacgt catacagtcc cagaaaacca
     6841 aaaatctgcg cccaaaacga tccgaatttg accaaataat ccgtctgcgg ctggttttgc
     6901 tgcaacaccg taccgataac cgatgcaata cccagcagac tgagcaaagc gactgcaaag
     6961 cgcatggagc tgaaaaaagc gaaccacgga cgggaaagaa gtgggggaga tctacgggat
     7021 ttactcattg tgtgtttatt ccgccatcag aaatatggga aagcagaatt gggcaaacag
     7081 aaaacaacgt cccgattcta ctgtcttgat gctttttatt tcaagacaat gaagacagcc
     7141 tgcatcgatt ccaacggttg cgattgaaaa aacttatcgc agaattgcct gaagccgtct
     7201 gaaaactttt cagacggcct ctaaaacaga ctattgcgga attaacgcaa accttggata
     7261 aagttggcga ccgctttcaa atcttcttca gacatacggt ttgcaatatc ttccatgatg
     7321 gtatttttac gctgaccgga cttgtaggca ttcatctgtt caacaatata tgcctgatgc
     7381 tgaccgccca aacgcggata agcctgaatt tcgcttccgc ctcccggcat acccgcaccg
     7441 ctcggaccgt ggcaggacat acacgccggc acttttttat cgctcaaacc gccgcgatag
     7501 attttcgcac ccaattcggg attttcctta ggattggctt caccggattt gggctgctgt
     7561 ttggcataga atgcggatac gttcaaaata tcctgatcgc tcaaattcat taccaccggt
     7621 ttcatcacag ctgccgaacc gtgggtgcgt ttaccgtcgc ggatgccgat agtttgatga
     7681 tagatgtaag cagtatgctg tgccgccaaa cgcggataca tcgcaatgcc gctgttaccg
     7741 tctgctgcat ggcaagccgc acaaaccgtt gcggcaacct gtttgccttt ttccacgtct
     7801 gctttgggag aggcggaaac cgcaccggca gccaaaacaa aggccaataa agtcaatcgt
     7861 ttcatggagt gctcctgatt acagcattgg ataacgcaac aatgctcttt ttatattcaa
     7921 atacgggatt tttgacccga ttaaaaccga tgattctgta aacgtgttat tctatactaa
     7981 atttacatta aattaccact gtgtttcaca taaaaccaac cgcatatttt tgctgtcgga
     8041 caaacggcgg cggaaaacaa ggatatgccc atgaaccttt ttcaaaacgc caaattcttc
     8101 acgacggtca accaccttaa agacctgccc gacacccctc tcgaaattgc ctttgtcggc
     8161 aggagcaatg ccggaaaatc cagtgccatc aataccctga ccaaccatgt ccgtcttgcc
     8221 tacgtttcaa aaacacccgg acggacgcag catatcaact tcttcgagct gcagaacggc
     8281 aattttatgg tcgatttgcc cggctacggt tatgcccaag tccctgaagc agtacgcgca
     8341 cattgggtca atctgctcgg cgactatctg caacagcgca aacagcttat cgggctggtt
     8401 ttgattatgg atgcccgcca tcctttaaaa gaactcgaca tccgtatgct ggattttttc
     8461 cacacgaccg gcagaccggt tcacatcctg ctgtcaaaag ccgacaaatt atccaaaaac
     8521 gaacagataa aaaccctgtc ccaagtcaaa aaactgctca aaccttattc cgacaggcaa
     8581 aacatcagcg tacagctgtt ttccagcctg aaaaaacaag gtattgacga ggccaaccga
     8641 actgtcggaa gctggtttga cgcagcagat gccgccgctt cctctccaga ggaaaactga
     8701 ccccaattat acggaaaccg tatttccccc acttgaccga ccgcaaacat ttaaaaaatt
     8761 gccactgcca aatctaaaat gccgtctgaa agacttttca gacggcattt tgcggagtct
     8821 ttaaaacaga gaatccaact gctgctgttt ggaaccagta ttactcggaa gcaccggcgt
     8881 ttcctgcata tcttggcgga cttcgtcatc cgccgcctgc cgtccgcctt ctgccgcgcc
     8941 cccgtcatct tcttttgccc gtcgggaagg ttgcggcgca ataccgctgt tgtccagcgt
     9001 caagcccgga tcggttacca tacgttcctt catatagtat tcgccattgc tgctgaccac
     9061 accttcaggc attttcatcc ccttgccctg ctttcctttc aacgcaaaac gcatatagtc
     9121 cacccaaacc ggcaccgcaa tcgtaccgcc gtagccgaca cgccccatac tcttaggttt
     9181 gtcgaagccg atatatacgg cagtaaccac atcagggtta aaaccgacaa accacgcatc
     9241 cttattgtca ttggtcgtac ccgttttacc ggcaatatcc gttcttccca acgcagctgc
     9301 cccccttgcc gtaccgacac ggaccacatc ctgcataatc ttatacataa tataggcatt
     9361 gcgcggatcg attgcctgag gcgcattttg cccggccacc aaaggttgca tttgggcgcg
     9421 caacctgccg tctctgtcat aaatcttatc gattacgtgc gaagaaaccc tatatccgcc
     9481 gttcgcaaat acgctatatg cctccgccac tttcaacggc gttgtctcgc ccgtacctaa
     9541 agccatagac aggcttgccg gcagctcgga cgacctgaag ccgaaacgcc ggatatactg
     9601 ttgcgcgtaa ccgacaccga tagacatcaa aatacggatg gaaaccatat tcttggaagc
     9661 cgtcagagcc tgtctcaaag taatgtagcc ggaatatctg ccgtctgaat ttttaggtgt
     9721 ccaaaccgaa ccgttcggcc ctttccccgg cagggaaatc ggcgcatcgt taaccaccgt
     9781 ggacgcggtc atccccttag ataatgccgc cgaatagaca aacggcttaa aggtcgaacc
     9841 cggctgccgc attgcctgaa cggcacgatt gaatgttttg ctgtgaaaat cataaccgcc
     9901 gaccagcgcg cgcacagctc cggtttttgc atccagcgaa accaaagccc cctgcagcaa
     9961 cggctcttga accaccgccc aacgcccgcc gttgtttttg acacggatga ccgcgcccct
    10021 gcggatacgg tcctccccca ttttttcatt attgaccgcg cgggccgcaa agcccaaggc
    10081 gcgcctgtca agcgtaaccc gcctgccgcc gggcagctgt atgacgacat ttttcttttt
    10141 agtcacatcc aacacaacgg cgggaaccat tttatcgacg gtatagagtc ccgacagata
    10201 ctggctgaca gtctcctcga catcttcact cttactcaaa tcgatatagt tttccgcacc
    10261 gcggtagctg ctgccgcgat cgaaattccg tagagccttg cgcaatgcct cggttgccac
    10321 cttctgatga tcggcgcgga ccgtggtata aaccttaaaa ccctgcgtat aggcatcttc
    10381 accgtatttc tcatacagtt cctgacgcac catttccgcc acatataaag cactctgatc
    10441 gattttccga acaaaccgct cgtaatgcag ttcctcattc aacgcctgat cgcgctgttg
    10501 cacggtaatc atcttctcct cgagcatatt gttcaaaata tacttctgac gcaacttggc
    10561 acgttctgga ttaacaatcg gattataggc agacggagcc ttgggcagtc ccgcaagcat
    10621 ggcggcttcc gccaaagtca aatctcggac attcttattg aaatagattt gcgcggcaga
    10681 tgcaaaacca taggcgcgct gaccgaggta aatctgattg aaatacaact cgaggatttt
    10741 gtctttgctt aaagactgct cgattttata ggcaagcaac acctcattga atttgcgtgt
    10801 gaacgttttt tcactgctca aataaaaatt tttcgccacc tgctgcgtaa tcgtactcgc
    10861 acccgactgc acgctgccgg acacgacatt gccgacggca gcgcgggcaa caccccaaac
    10921 atccaccccc caatgccggt aaaagcgttt atcctcggcg gcgataaccg cattccgcaa
    10981 cacctctggg aaatcgccga tttttgtaaa ttcgcgccgc tgctccccat acataccgat
    11041 gacttcccca tccgccgaat aaatagtcaa cggcatttta ggctggtaat gctgcaaaga
    11101 atccaaagac ggcagtttcg gatacgttac caaaatagca atggcaacca aacccactcc
    11161 aaatacacaa aacccaaaaa ccaaaccaaa acaagtcgtt aaaatctttt taatcatagc
    11221 tgaataataa tttaccatta ttggtattaa ataaagtaaa atagcaaccg atttctacaa
    11281 agcacggttt caatgtgcaa agaacaagga atccattacg gataccgaaa cggttactca
    11341 ctgtacaaat aaagcaggaa ctttcatcat gcgcttgttt aaaagcttga aaaaccctaa
    11401 aaaaacagat gccaagctcc ctaaaaaatc ttcgggactc aataaccgcg cggcaatcgg
    11461 catcgatatc gaccagcatt ccatcaaaat ggtccaattg tcaggacgta gtttaaacca
    11521 aattcaattg gaaaaatacg tcattgccaa attaccaaag aatatcattc aaggcaataa
    11581 agtccaaaat tacgatcaac ttgttacata tttgcaacaa gcctatgcca aactgggtac
    11641 ttcgtgcaaa aacatcatcg cgtccgtccc gcaaaatctg gcaaccatcg aacaattgac
    11701 ctacacagac aaagatgcag aattagacct gcaggggttc gtggagtcct ccatctccga
    11761 agtcagctcg atatcgctcg aagaagccaa ttacgactat caggtcttgt cccaatcggc
    11821 cgccggcgaa gctgtgttgg ccgtcgcatc gagaaaggat gaaatcgaac ccctgattga
    11881 cgcattcaac gccgccggta tgaaattatc cgcgcttgat gtggacattt tcggacaata
    11941 caacgcctac gcgctatgga taaaccattt cgcccccgag cttgcggccg aaaaagtcgc
    12001 cattttcggc gtatatgccg cacagaccta cgccttggtc atccaagacg gaaaactcct
    12061 atacaaacag gaaacctccg tcagcgaaga acagctcaac caactcatcc agcgcaccta
    12121 tcaggtaaca gaagaaaaag cggaagaaat catcaactcc ccgcaaaaac cttccgatta
    12181 ccaagaaagc gtggcaaact atttcaacca gcagattacc caagaaatac aaagggtctt
    12241 gcagttttat tacaccacgc agaccgcaga cgatatgacc gacatcaagc atatcctgct
    12301 gaccggggaa gcggcgcgcc aggaaggcat cgcccaaacc gtcgcctcac aaaccaatgc
    12361 agatgtacaa tgcgtccatc ccgcgcgtta ttttgcggac aacctcaaaa cagacaaaca
    12421 acaattcgaa cttgatgcgc cgacactgac cagggcgttc ggtttggcgg tacggggatt
    12481 ataattatga acaatttaat caaaatcaac ctcctcccct acagggaaga gatgaacaag
    12541 cgcaaacagc agcagtttaa aacgctgatg tacggtgccg tgctgacggg cgttgccgcc
    12601 gttgcggcaa cctacctgtt tatcgacaat atgatcaata accagtcgga aagaaacacg
    12661 ctgctggaaa cctccatcgc acacttggat accgagctgt cggaaataca aaagctcaaa
    12721 caggaaaaag atgccttcct gattaagaaa aacaaaatcg aggagctcca gctcaaacgc
    12781 ctccaagccg caaaaatcct cgacagcctg aatgaggccg tccccggaag cacctacctg
    12841 acctcgctgg atgccgttac cgccgactct tatcggctca gcggcaggac atccagcgac
    12901 aaccgcgttg ccgccatgat gagggcgatg cccaataccg gcatattcaa gcaacccgaa
    12961 ttgttaagca tcaagaaaaa caattcgcat caagaattta cccttcaggc aacattacaa
    13021 cccatcgtaa aggcggccga atccaaagag aatccggctt cgggaaacgc acaggaggca
    13081 aactgaatgg cttctaaatc atctaaaacc aacttggatc tcaacaacct tcacctgctc
    13141 aaccttcctg ccaggctttt tatcgccctg ctggccgttg ccgccgtgct ggggctcggt
    13201 tatgccggat tgttcaaaag ccagatggaa tcccttgagg aatacgaagc aaaagaaacc
    13261 gaactgaaaa acacctacaa acagaaaagt atcgacgcgg ccagcctgaa caacctgagg
    13321 gacgaacttg cctcaatccg ctctgccttc gatatcatgt tgaaacagct gccgacagat
    13381 gcagaaattc ccaacctggt tcaagagctt catcaggcag gttcgagcaa cggcctgcgc
    13441 ttggacagcg ttatgcccca acctcccgta gatgacggcc ccatcaaaag attaccctat
    13501 tccatttcca ttaccggaaa ttacgaacag atcagccaat ttacccgcga tgtcggcagc
    13561 ctctcccgaa tcattaccct tgagtcgctg aaaatcgccc aatctccgga aaacggcggc
    13621 aatcctgacg gcaagagcag catcctgaac ctcagtgcca ttgccaccac ctaccaagca
    13681 aaatccgtag aagagcttgc cgcagaagcg gcacaaaatg ccgagcaaaa ataacttacg
    13741 ttagggaaac catgaaacac tatgccttac tcatcagctt tctggctctc tccgcgtgtt
    13801 cccaaggttc tgaggaccta aacgaatgga tggcacaaac gcgacgcgaa gccaaagcag
    13861 aaatcatacc tttccaagca cctaccctgc cggttgcgcc ggtatacagc ccgccgcagc
    13921 ttacagggcc gaacgcattc gacttccgcc gcatggaaac cgacaaaaaa ggggaaaatg
    13981 cccccgacac caagcgtatt aaagaaacgc tggaaaaatt cagtttggaa aatatgcgtt
    14041 atgtcggcat tttgaagtcc ggacagaaag tctccggctt catcgaggct gaaggttatg
    14101 tctacactgt cggtgtcggc aactatttgg gacaaaacta cggtagaatc gaaagcatta
    14161 ccgacgacag catcgtcctg aacgagctaa tagaagacag cacgggcaac tgggtttccc
    14221 gtaaagcaga actgctgttg aattcttccg acaaaaacac cgaacaagcg gcagcacctg
    14281 ccgcagaaca aaattaagaa gaggattact ccattatgaa taccaaactg acaaaaatca
    14341 tttccggtct ctttgtcgca accgccgcct ttcagacagc atcggcagga aacattacag
    14401 acatcaaagt ttcctccctg cccaacaaac agaaaatcgt caaagtcagc tttgacaaag
    14461 agattgtcaa cccgaccggc ttcgtaacct cctcaccggc ccgcatcgcc ttggactttg
    14521 aacaaaccgg catttccatg gatcaacagg tactcgaata tgccgatccc ctgttgagca
    14581 aaatcagtgc cgcacaaaac agcagccgtg cgcgtctggt tctgaatctg aacaaaccgg
    14641 gccaatacaa taccgaagta cgcgggaaca aagtttggat attcattaac gaatcggacg
    14701 ataccgtgtc cgcccccgca cgccccgccg taaaagccgc gcctgccgca ccggcaaaac
    14761 aacaggctgc cgcaccgtct accaagtccg cagtatccgt atccaaaccc tttaccccgg
    14821 caaaacaaca ggctgccgca ccgtttaccg agtccgtagt atccgtatcc gcaccgttca
    14881 gcccggcaaa acaacaggcg gcggcatcag caaaacaaca gacggcagca ccagcaaaac
    14941 aacaggcggc aacaccagca aaacaaacca atatcgattt ccgcaaagac ggcaaaaatg
    15001 ccggcattat cgaattggct gcattgggct ttgccgggca gcccgacatc agccaacagc
    15061 acgaccacat catcgttacg ctgaaaaacc ataccctgcc gaccacgctc caacgcagtt
    15121 tggatgtggc agactttaaa acaccggttc aaaaggttac gctgaaacgc ctcaataacg
    15181 acacccagct gattatcaca acagctggca actgggaact cgtcaacaaa tccgccgcgc
    15241 ccggatactt taccttccaa gtcctgccga aaaaacaaaa cctcgagtca ggcggcgtga
    15301 acaatgcgcc caaaaccttc acaggccgga aaatctccct tgacttccaa gatgtcgaaa
    15361 tccgcaccat cctgcagatt ttggcaaaag aatccgggat gaacattgtt gccagcgact
    15421 ccgtcaacgg caaaatgacc ctctccctca aagacgtacc ttgggatcag gctttggatt
    15481 tggttatgca ggcacgcaac ctcgatatgc gccagcaagg gaacatcgtc aacatcgcgc
    15541 cccgcgacga gctgcttgcc aaagacaaag ccttcttaca ggcggaaaaa gacattgccg
    15601 atctgggcgc gctgtattca caaaacttcc aattgaaata caaaaatgtg gaagaattcc
    15661 gcagcatcct gcgtttggac aatgccgaca caaccggaaa ccgcaatacg cttgtcagcg
    15721 gcaggggcag cgtgctgatc gatcccgcca ccaataccct gattgttacc gatacccgca
    15781 gcgtcatcga aaaattccgc aaactgattg acgaattgga cgtacccgcg caacaagtga
    15841 tgattgaggc gcgtatcgtc gaagcggcag acggcttctc gcgcgatttg ggcgttaaat
    15901 tcggcgcgac aggcaagaaa aagctgaaaa atgatacaag cgcattcggc tggggggtaa
    15961 actccggctt cggcggcgac gataaatggg gggccgaaac caaaatcaac ctgccgatta
    16021 ccgctgccgc aaacagcatt tcgctggtgc gcgcgatttc ctccggtgcc ttgaatttgg
    16081 aattgtccgc atccgaatcg ctttcaaaaa ccaaaacgct tgccaatccg cgcgtgctga
    16141 cccaaaaccg caaagaggcc aaaatcgaat ccggttacga aattcctttc accgtaacct
    16201 caatcgcgaa cggcggcagc agcacgaaca cggaactcaa aaaagccgtc ttggggctga
    16261 ccgttacgcc gaacatcacg cccgacggcc aaatcattat gaccgtcaaa atcaacaagg
    16321 actcgcctgc gcaatgtgcc tccggtaatc agacgatcct gtgtatttcg accaaaaacc
    16381 tgaatacgca ggctatggtt gaaaacggcg gcacattgat tgtcggcggt atttatgaag
    16441 aagacaacgg caatacgctg accaaagtcc ccctgttggg cgacatcccc gttatcggca
    16501 acctctttaa aacacgcggg aaaaaaaccg accgccgcga actgctgatt ttcattaccc
    16561 cgaggattat gggtacggcc ggcaacagcc tgcgctattg atgcgtcaaa ataagggcat
    16621 atgttttacg gcatatgccc tttctttatg ctttttgccg cgaccgaaat gccgtcattc
    16681 ccgcgcaggc agaaatccaa cttgtccggt tccggttgtt tttcgtctcg taacttttga
    16741 gccgtcattc ccgcgcaggc agaaatccag tccgttcagt ttcggtcatt tccgataaat
    16801 tcctgttgct tttcatttct ggattcccac ttttgtggga atgacggcgg agaggttttt
    16861 gttgtttcgg agaagtttct gcaaccctag aatctcgtta tttccacaaa aaacagaaac
    16921 ccgaaacagc aacttaaaac ctcgtcattc ccgcaaaagc gggaatccgg tccgttc
//
LOCUS       DBBZYD010000042        16618 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.042, whole genome shotgun sequence.
ACCESSION   DBBZYD010000042 DBBZYD010000000
VERSION     DBBZYD010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16618
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.042"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..79)
                     /locus_tag="ACJJDL_001128"
     CDS             complement(<1..79)
                     /locus_tag="ACJJDL_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HGG7573852.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="ACJJDL_001129"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="ACJJDL_001129"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HGG7573853.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="ACJJDL_001130"
     CDS             complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="ACJJDL_001130"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HGG7573854.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRTFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="ACJJDL_001131"
     CDS             complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="ACJJDL_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HGG7573855.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDEGGVPQDLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCVWLVERGLLHTDP
                     TADIKPPKQPERVPKALSQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLVGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4804..5868
                     /gene="fba"
                     /locus_tag="ACJJDL_001132"
     CDS             4804..5868
                     /gene="fba"
                     /locus_tag="ACJJDL_001132"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HGG7573856.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMASRYAKGELNQIVK"
     gene            6026..6847
                     /locus_tag="ACJJDL_001133"
     CDS             6026..6847
                     /locus_tag="ACJJDL_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HGG7573857.1"
                     /translation="MNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTTPLD
                     HKDKSLQSLTLDQSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIE
                     VDGQTITLASGEFQIYKQNHSAVVALQIEKINNPDKIDSLINQRSFLVSGLGGEHTAF
                     NQLPDGKAEYHGKAFSSDDPNGRLHYSIDFTKKQGYGRIEHLKTPEQNVELASAELKA
                     DEKSHAVILGDTRYGGEEKGTYHLALFGDRAQEIAGSATVKIREKVHEIGIAGKQ"
     gene            6986..7663
                     /gene="tsaB"
                     /locus_tag="ACJJDL_001134"
     CDS             6986..7663
                     /gene="tsaB"
                     /locus_tag="ACJJDL_001134"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HGG7573858.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETLLFHQEAGSRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFNTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHSELLYVRNKIALTAKEQ
                     AERKART"
     gene            7660..8100
                     /gene="rimI"
                     /locus_tag="ACJJDL_001135"
     CDS             7660..8100
                     /gene="rimI"
                     /locus_tag="ACJJDL_001135"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HGG7573859.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGGIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWFAHLPEDTQRLLLE
                     VRAGNTAAQALYAAHGFTDAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            8094..8831
                     /locus_tag="ACJJDL_001136"
     CDS             8094..8831
                     /locus_tag="ACJJDL_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG7573860.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8893..9534
                     /gene="pyrE"
                     /locus_tag="ACJJDL_001137"
     CDS             8893..9534
                     /gene="pyrE"
                     /locus_tag="ACJJDL_001137"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HGG7573861.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9608..10042
                     /locus_tag="ACJJDL_001138"
     CDS             9608..10042
                     /locus_tag="ACJJDL_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HGG7573862.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10039..11349
                     /gene="argA"
                     /locus_tag="ACJJDL_001139"
     CDS             10039..11349
                     /gene="argA"
                     /locus_tag="ACJJDL_001139"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HGG7573863.1"
                     /translation="MIVPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSTVAALEGGVHRVQILNGASDGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEISCLAVSPQAQDGGYGERLLAHIIDKARSMGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
     gene            11445..13460
                     /locus_tag="ACJJDL_001140"
     CDS             11445..13460
                     /locus_tag="ACJJDL_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HGG7573864.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILNQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNQVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIDKDAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSSEGEAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADGKWQEVELPRLPSGALEMTDQPWGGDVVYLAAGDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGIEVRQFWVMSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELACVLLFLKEFLG"
     gene            complement(13574..14530)
                     /locus_tag="ACJJDL_001141"
     CDS             complement(13574..14530)
                     /locus_tag="ACJJDL_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7573865.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            14766..15731
                     /locus_tag="ACJJDL_001142"
     CDS             14766..15731
                     /locus_tag="ACJJDL_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7573866.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKE"
BASE COUNT         3712 a         5053 c         4549 g         3304 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccgaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatat agccgtcccg
      121 accgattaaa ttcatatttt aaaacaatat tctgtttaca aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgtgga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgccaaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctccttc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtg aaagaaatca acctcttggg acaaaacgtc aacgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgc atcgtccacg
      961 aaatccccgg cattgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt gtgcctgagc agcgatttca
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acatcgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgcc ggacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaacgat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccagct ccaagcccgc accgccaaca
     1501 accgcgtcgt caactttacc ggcacgcccg acatgattaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaagttgt cgaagcctaa acccttacgc
     1621 cgaaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgatgg
     1681 cgcggctagg cggcttaatt tgccgcatcc cgatccgaca accacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa gcccaaatcg tctaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacgaagcgc
     1981 atatcggcga cggtggcgtt cagtttttcg gcaaccgcca atgcgggggc gaccatactg
     2041 ccgaaggcaa tgaaggcggt tttcccacct tcgcggcgga taatgccctt gccgatttcc
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg catccgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat attcggaatg cagcgcaaaa agctcaaatc gtacagaccg
     2281 gcatgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggc
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catgccttcg cacgccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg caatgccgac atcgaaataa cggtcgggga atcgttgttc aaactccacc
     2521 agtccgctgc cctcgcgcat cgcgggcgtg atggcgatca aacgctcgtc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcggc gggcttgggt
     2641 tctttttcag acggcatttg cgccgcgctt tctttaggca ggttggcgac ggcgtggtat
     2701 ttgacgggat cgttttcggc gagtttgtag ccgttgccct ttttggtgat gacgtgcagc
     2761 agttgagggc ctttgcggct gcgcaagtct ttcaatacgt ccaccagatt ttcgacgttg
     2821 tgtccgtcca cggggccggt gtagcggaag ccgaagtttt caaacaaaga cagcgactgt
     2881 ttggcgtgtt cggcttcttc ggcaagggtt ttgattttgt gttcgacttt ttgggcgagc
     2941 tccatcgcgc cgggtatttt gtctaatacc ttgcccgttt gcgctttgac ggtactcaac
     3001 aggccgtgca tatcgcgcac gacgttgctg gcgaggtatt tcggcagcgc gccgacgttg
     3061 ggggaaatcg acatttcgtt gtcgttgagg acgaccagca aatccacatc catatcgcct
     3121 gcgcaattca aggcttcaaa cgcctgcccc gccgtcatcg cgccgtcgcc gatgatggcg
     3181 acgctgcggc ggtcgctgcc caagagtttg tctgccgccg ccatgcccaa cgccgcgccg
     3241 atggatgtgg aagaatgccc tacgccgaac gcgtcgtatt ccgactcgct gcgttttggg
     3301 aagccagcta aaccgccgta ttggcgcatg gtgtgcatct ggtttttcct gcctgtcagg
     3361 attttgtgcg gatagctttg gtgtccgaca tcccacacca gcttgtcttc gggcgtgtcg
     3421 tacacatagt gcagggcgat ggtcagttcg accgcgccca aattgctggc gaaatgcccg
     3481 ccggtctgcc cgacagattc cagcagaaag gtgcgcaact cgccggcaag gcgcggcagc
     3541 tgttttttgt ccagacggcg caaatcttgc gggctgtcaa tcaggtcgag tagggggctt
     3601 gggttcatgg tgtgtctttt ttatgtgtcg tccaggtgca acgaccaatt atatatcaag
     3661 agcgtgcggc tgacggctga ttttgccgta tgtcattcgt cctgccgctt ggcgcgcggg
     3721 tgggcttcgt catacaggcg ggcgatgtgg tcgaaatcga gtttggtgta aatctgcgtg
     3781 gtcgaaaggc tgctgtgccc gagcagctcc tgcaccgccc ggatgtcgcg cgaagcctgc
     3841 aacaggtgtc cggcgtagct gtggcgcatc atatgcggcg aaacgtgcct gccgtcgccg
     3901 ttttgcgccg cccattgcgc caaacgtttt tggatttggc gttggctcag gcgcgtgccg
     3961 ttcctgccgg taaacagggc tttgccgtcc gatgccgtct gacgcagcgg cagatagttt
     4021 ttcagggctt ccacgctttt gccgaccagc ggcacctgcc gctgcttgcg ccctttgccg
     4081 gtaacgtgta cccacgcctc gtccaaatag acatcatctg cattcaagcc gtgtatctcg
     4141 ctcacgcgca aaccgctgcc gtacatcagc tcgaacaggg cgtgatcgcg caccgccagc
     4201 gggtcgccgc cgtccacggg caaatccagc atccggttca gccattcctg cgacagggct
     4261 ttgggtacgc gctcgggctg cttcggcggt ttgatgtcgg cggtcgggtc ggtatgcagc
     4321 agaccgcgtt ccaccagcca aacacaatac tgccgccaag acgacagctt gcgcgccagc
     4381 gtccgcgcat tcaaaccgcg ctgcgacagc cgccgcaacg ccgccgtaaa atcgcgccgc
     4441 gacaagtcct gcggcacgcc gccttcatct tcagacggca tttgtgccaa cagcgcaaac
     4501 agttcttcca aatcgcgccg gtatgccgcc accgtgtgct ccgacttgcc ctcgcgcacg
     4561 atgttttcca aataagcgtc aaaatgcgcc gcaaacccgt ccaaaaccat aaccgcccca
     4621 cacaaatatc aaaaaaacag tgaaaacatt atcataaacg acacaccaaa accccgaacc
     4681 gcccaaaatc cgacccgtcc gcccgccgtt atcgttaaca taaaatcaat gagccgttta
     4741 tggttttttg ccgcaaaaaa cattataatc cgccttattt acctattgcc caaggagaca
     4801 caaatggcac tcgtatccat gcgccaactg cttgatcatg ctgccgaaaa cagctacggc
     4861 ctgcccgcgt tcaacgtcaa caacctcgaa caaatgcgcg ccattatgga agccgccgac
     4921 caagtcaacg cgcccgtcat cgtacaggcg agtgcaggtg cgcgcaaata tgcgggcgcg
     4981 ccgtttttgc gccacctgat tctggcggct gtcgaagaat ttccgcacat ccccgtcgtg
     5041 atgcaccaag accacggcgc atcgcccgac gtgtgccaac gctccatcca actgggcttt
     5101 tcctccgtga tgatggacgg ctcgctgatg gaagacggca aaaccccttc ttcttatgaa
     5161 tacaacgtca acgccacccg taccgtggtt aatttctccc acgcttgcgg cgtatccgtc
     5221 gaaggcgaaa tcggcgtgtt gggcaacctc gaaaccggcg aagccggcga agaagacggt
     5281 gtaggcgcag tgggcaaact ttcccacgac caaatgctca ccagcgtcga agatgccgtg
     5341 cgtttcgtta aagataccgg cgttgacgca ttggcgattg ccgtcggcac cagccacggc
     5401 gcgtacaaat tcacccgtcc gcccacaggc gacgtgttgc gtatcgaccg catcaaagaa
     5461 atccaccaag ccctgcccaa tacacacatc gtgatgcacg gctccagctc cgttccgcaa
     5521 gaatggctga aagtcatcaa cgaatacggc ggcaatatcg gcgaaaccta cggcgtgccg
     5581 gttgaagaaa tcgtcgaagg catcaaacac ggcgtgcgca aagtcaacat cgacaccgac
     5641 ttgcgccttg cttccaccgg cgcggtacgc cgctaccttg ccgaaaaccc gtccgacttc
     5701 gatccgcgca aatacctgag caaaaccatt gaagcgatga agcaaatctg cctcgaccgc
     5761 tatcttgcgt tcggttgcga aggtcaggca ggcaaaatca aaccggtttc cttggaaaaa
     5821 atggcaagcc gttatgccaa gggcgaattg aaccaaatcg tcaaataaca ggttgcttgt
     5881 aaacaaaatg ccgtctgaac cgttgttcgg acggcatttg atttttgctt ctttgacctg
     5941 cctcattgat gcagtatgca aaaaaagata ccataaccaa aatgtttata tattatctat
     6001 tctgcgtatg actaggagca aacctgtgaa ccgaactgcc ttctgctgcc tttctttgac
     6061 cgccgccctg attctgaccg cctgcagcag cggaggcggc ggtgtcgccg ccgacatcgg
     6121 cgcggggctt gccgatgcac taaccacacc gctcgaccat aaagacaaaa gtttgcagtc
     6181 tttgacgctg gatcagtccg tcaggaaaaa cgagaaactg aagctggcgg cacaaggtgc
     6241 ggaaaaaact tatggaaacg gcgacagcct caatacgggc aaattgaaga acgacaaggt
     6301 cagccgcttc gactttatcc gtcaaatcga agtggacgga caaaccatca cgctggcaag
     6361 cggcgaattt caaatataca aacagaacca ctccgccgtc gttgccctac agattgaaaa
     6421 aatcaacaac cccgacaaaa tcgacagcct gataaaccaa cgctccttcc ttgtcagcgg
     6481 tttgggcgga gaacataccg ccttcaacca actgcctgac ggcaaagccg agtatcacgg
     6541 caaagcattc agctccgacg acccgaacgg caggctgcac tactccattg attttaccaa
     6601 aaaacagggt tacggcagaa tcgaacacct gaaaacgccc gagcagaatg tcgagcttgc
     6661 ctccgccgaa ctcaaagcag atgaaaaatc acacgccgtc attttgggcg acacgcgcta
     6721 cggcggcgaa gaaaaaggca cttaccacct cgcccttttc ggcgaccgcg cccaagaaat
     6781 cgccggctcg gcaaccgtga agataaggga aaaggttcac gaaatcggca tcgccggcaa
     6841 acagtagcat ttgaaaaatg ccgtccgaac acgatagttt accgttcgga cggcattttt
     6901 gcgccatact gccctaggac acgacggcac ggcaggcaag ccggtttcac tatataatgc
     6961 cgtctgaacc aacgagaacc acaccatgca agccgatttc aaccgccccg tcctcgccgt
     7021 cgataccgga acttcctatt tgtcgctcgc gctgcgcgcc gacggcgaaa ccctcctgtt
     7081 ccatcaggag gccggcagcc gccagtccga actgatcctg ccggaaatcc gcaccctatt
     7141 ccgaaatgcg ggcattaccg ccgccgattt gggggcgatt gtttatgcga aaggtcccgg
     7201 cgcgtttacc ggactgcgta tcggcatcgg cgtggcgcaa ggtttggcaa cgccattcaa
     7261 tacgccttta atcggcatcc ccacgctcga tgccgccgcc tcgctgccgc cgccgcaaag
     7321 ctgcatactc gccgctgcgg acgcgcgtat gggcgaagtg ttttatgcgt ggttcgacac
     7381 gctgaaccgc cgccgtttga gcgattatca ggtcgggcgg gcggcagaca tccggctgcc
     7441 ggagggatgt gccttttcag acggcatagg cagcgcgttc gcgttggaag aaacgccgcc
     7501 gttttcaggc aaacccgata tgccgaccgc cgccgacttc ctcaatctgg cggcggaagg
     7561 cggttttccc gccgtcgctg ctgcacactc cgaactgctc tacgtccgca acaaaatcgc
     7621 cctaaccgcc aaagaacagg cggaacggaa agcccgaaca tgaacatccg ccgcgcctca
     7681 ccgtccgact gcgccgcact cgccgcgctc gatgccgtct gcaacccgtc cgcgtggacg
     7741 caacgccaat ttgagtccgc attggtttcg ccgtccgaac aggttttcct cgcggaaaaa
     7801 gacggcggga ttgccgcctt tatcgtttgg cagaacctgc ccgacgaatc cgaactgcac
     7861 ctgattgcca ccgcgcccga atgccgccgc cgtggcgttg cgtccgccct gctcgaatat
     7921 tggttcgcac atctgcccga agacacgcaa cgcctgctgc tcgaagtccg tgcaggcaac
     7981 accgccgcac aggcactgta cgcggcgcac ggctttaccg atgcgggcag gcggaaaaac
     8041 tattaccgta cagccgacgg taaaaccgaa gatgctgtct taatggagaa aatatgttaa
     8101 gcgcgcgcta cctccacctg cacgaagctt tgggtttagg cccgatgtgg ctgaaacagg
     8161 ccgccgccgt cctgccgccc aaaaacacac ccgcaacccc ggcacaggca cgtcctcaaa
     8221 ccgtccgcgc cgccccgatc cgcccttccc aaccccataa cggtcaggcg cggctcgaaa
     8281 cgatgaaagc gttggaaacc gccgccgtac atacgcgcaa acccgcgcct gaaaccgaaa
     8341 cgcccccgcc cggcctttca gacggcatcg cccccgttcc cgccgcttcg ggcataacca
     8401 aacttgccgt cgtcagcctt tgcccaccga ttgaggatgc ggtttacggg caactgttct
     8461 acggcaaagc gggtgttctg cttgacaaca tactcaaagc cgtaggactg gatgccgcct
     8521 atgtccacaa aacctgttgg gtgaaaaccg ccgccgtcgg caacccgatg ccgtctgaag
     8581 cggcaatcga aaccgcgacg gtttccgtca tgcaggaact cgacggctgc cgcgcccccg
     8641 ccgtcctatt cctcggacag gcttttgtcc agcctgaacg gcaaacgatg attgaaactt
     8701 tgtgcggcag ccgtcccttc ttcatcatcg accatcccgc ccggctgttg cgccaacccg
     8761 aacttaaagc ccgcgcctgg caggtgttga aacagttgaa acgcgccttg cggcaaggcg
     8821 gcggcagttg aagcgcaccg cacggggcgg tagaatcgca actgcgtccc aatatctgac
     8881 agaaagcaca aaatgaccga tttccgccaa gatttcctca aattctccct cgcccaaaat
     8941 gttttgaaat tcggcgaatt taccaccaaa gccggacggc ggtcgcccta tttcttcaat
     9001 gccggcctct ttaacgacgg cttgtccacg ctgcaactgg caaaatttta cgcacaatcc
     9061 atcattgaaa gcggcatccg attcgatatg ctgttcggcc ccgcctacaa aggcattatt
     9121 ttggcggcgg caaccgcgat gatgctggcg gaaaaaggcg tgaacgtccc gtttgcctac
     9181 aaccgcaaag aagccaaaga ccacggcgaa ggcggcgtgt tggtcggtgc gccgcttaaa
     9241 ggccgcgtgc tgattatcga cgacgtgatt tccgccggca catccgtacg cgaatcgatc
     9301 aagctgattg aagcggaggg cgcaaccccc gccggtgtcg ccatcgcgct cgatcgcatg
     9361 gaaaaaggca cgggtgagtt gagcgcggtt caggaagtgg aaaaacaata cggtctgccc
     9421 gtcgccccca tcgccagcct gaacgatttg tttattctgt tgcaaaacaa ccccgaattc
     9481 ggacagttcc tcgaacccgt ccgagcctac cgtcggcagt acggcgtaga ataaaaacaa
     9541 agcatatgcc gtccgaaccg ccttacgcct cagacggcat caaacctgac acacacgagg
     9601 aaataccatg cccgcctgtt tctgccccca ctgcaaaacc cgtctctggg tcaaagaaac
     9661 ccaactcaat gtcgcccaag gcttcgtcgt ctgccaaaaa tgcgaaggac tgtttaaagc
     9721 caaagaccat ctggcaagca cgaaagaacc catattcaac gatttgcccg aggctgtttc
     9781 ggatgtcaaa ctcgttcacc gtatcggcac gcgcgccatc ggcaagaaac agatttcccg
     9841 tgacgaaatc gccggcatcc tcaacggcgg cacaacccag cccgatattc cgcccgcaac
     9901 cgccgccacc cctgctgccg caccgcaggt taccgtaccg cccgccgcgc ccgcccgtca
     9961 ggatgggttc aactggacga ttgcaaccct gtttgccctt atcgtcctca ttatgcagct
    10021 ttcctacctc gtcatcctat gatcgtgccc gacctctttg tcgcccactt ccgcgaagcc
    10081 gccccctaca tccgccaaat gcgcggcaaa acgctggtcg ccggcataga cgaccgcctg
    10141 ctcgaaggtg ataccttaaa caagctcgcc gccgacatcg ggcttttgtc gcaactgggc
    10201 atcaggctcg tcctcatcca cggcgcgcgc cacttcctcg accgccacgc cgccgcgcaa
    10261 ggccgcacgc cgcattattg ccggggcttg cgcgttaccg acgaaacctc gctcgaacag
    10321 gcgcagcagt ttgccggcac cgtccgcagc cgttttgaag ccgcattgtg cggcagcgtt
    10381 tccgggttcg cgcgcgcgcc ttccgtcccg ctcgtatcgg gcaacttcct gaccgcccgt
    10441 ccgataggtg tgattgacgg aaccgatatg gaatacgcgg gcgttatccg caaaaccgac
    10501 accgccgccc tccgtttcca actcgacgcg ggcaatatcg tctggctgcc gccgctcgga
    10561 cattcctaca gcggcaagac cttccatctc gatatgcttc aaaccgccgc ctccgtcgcc
    10621 gtctcgcttc aggccgaaaa actcgtttac ctgacccttt cagacggcat ttcccgcccc
    10681 gacggcacgc tcgccgtaac cctctcggca caggaagcgc aatcgctggc ggaacacgcc
    10741 ggcggcgaaa cgcgacggct gatttcgtcc accgttgccg cgctcgaagg cggcgtgcat
    10801 cgcgtccaaa tcctcaacgg tgcctccgac ggcagcctgc tgcaagaact cttcacccgc
    10861 aacggcatcg gcacatccat tgccaaagaa gccttcgtct ccatccggca ggcgcacagc
    10921 ggcgacatcc cgcacatcgc cgccctcatc cgcccgctgg aagaacaggg catcctgctg
    10981 caccgcagcc gcgaatacct cgaaaaccac atttccgaat tttccatcct cgaacacgac
    11041 ggcaacctgt acggttgcgc cgccctgaaa acctttgccg aagccgattg cggcgaaatc
    11101 tcctgccttg ccgtctcgcc gcaggcacag gacggcggct acggcgaacg cctgcttgcc
    11161 cacattatcg ataaggcgcg cagtatgggc ataagcaggc tgttcgccct ctccacaaat
    11221 accggcgaat ggtttgccga acgcggcttt cagacggcat cggaagacga gttgcccgaa
    11281 acgcggcgca aagactaccg cagcaacgga cgaaactcgc atattctggt acgtcgcctg
    11341 caccgctgac cgcaacggaa agccgccgca gaaatgccgt ctgaaccccg tttcagacgg
    11401 catttccccg attataaaga cctgcccaac cctcaaggac cccgatgaaa tcctaccccg
    11461 acccctaccg ccattttgaa aacctcgatt ccgccgaaac gcaaaacttc gctgctgaag
    11521 cgaatgccga aacgcgcgcg cgttttttaa acaacgacaa ggcgcgcgcg ctttcagacg
    11581 gcattttgaa tcaaatgcag gacacgcggc agattccgtt ttgtcaggaa caccgcgcgc
    11641 ggatgtacca tttccatcag gacgcggaat atccgaaggg cgtgtaccgc gtgtgcacgg
    11701 cggcgaccta ccgttcgggc tatccggagt ggaaaatcct gttttcagtg gcggacttcg
    11761 acgaattgct cggcgacgat gtatatttgg gcggcgtgtc gcacttggtg gaaaagccca
    11821 accgcgcgtt gttgacacta agcaaatcag gcggcgatac ggcgtacacg ctggaagtgg
    11881 atttggaagc aggggaattg gtagaaggtg gttttcactt tccggcaggc aaaaaccaag
    11941 tgtcgtggcg cgatgaaaac agcgtgtggg tgtgtccggc ttgggacgaa cgccagttga
    12001 ccgaatcggg ctatccgcgt gaggtgtggc tggtggaacg cggcaagagt ttcgaggaaa
    12061 gcctgcctgt gtatcaaatc gataaagatg caatgatggt gaacgcgtgg cgttatctcg
    12121 atccgcaagg ttcgccgatt gatttgattg aagcgtcgga cggtttttac accaaaacct
    12181 atttgcaggt gtcgtcggaa ggcgaggcga aaccgttaaa cctgcccaac gattgcgatg
    12241 tggtcggcta tctggcgggg catcttttgc tgacgctgcg caaggactgg aaccgcgcga
    12301 accaaagcta tccgagcggt gcgctggtgg cggtgaagct gaatcggggt gaactcgggg
    12361 cggcgcagct tttgtttgcg cctgatgaaa cgcaggcatt ggaaagcgtg gaaacgacca
    12421 agcgttttgt ggtggcgagc ctgctggaaa acgtacaagg ccgtctgaaa gcgtggcgtt
    12481 ttgccgacgg caaatggcag gaagtcgaac tgccgcgcct gccttcgggc gcgttggaaa
    12541 tgaccgacca gccttggggc ggcgacgtgg tttaccttgc cgccggcgat ttcaccacac
    12601 cgctgacgct gtttgcgctg gatttgaacg tgatggaact gaccgtcatg cgccgccagc
    12661 cgcagcagtt cgattcagac ggcatcgaag tgcggcagtt ttgggtgatg tcgtccgacg
    12721 gcgaacgcat cccttatttc cacgtcggca aaaacgccgc gcccgacacg ccgacgctgg
    12781 tttatgccta cggcggtttc ggcgtacccg agctgccgca ttatctgggc agcatcggca
    12841 aatactggct ggaagagggc aacgccttcg tgttggcgaa catacgcggc ggcggcgagt
    12901 tcggcccgcg ctggcatcag gcggcgcagg gaatcagcaa acacaaaagc gtcgatgatt
    12961 tgcttgccgt cgtgcgcgat ttgtccgagc gcggcatcag ttcgccccaa cacatcggtt
    13021 tgcagggcgg cagcaacggc ggcctgatta ccgccgccgc cttcgtgcgc gaaccgcaaa
    13081 gcataggcgc actggtgtgc gaagtgccgc tgaccgacat gatccgttat ccgctgctct
    13141 ccgccggttc aagctggaca gacgaatacg gcaatccgca aaaatacgaa gtctgcaaac
    13201 gccggttggg cgaattgtcg ccgtatcaca atctttcaga cggcatcgat tatccgcccg
    13261 cgctcatcac caccagcctc agcgacgacc gcgtccatcc cgcccacgcg ctcaagtttt
    13321 acgccaaact gcgcgaaacc tcgccgcaat cttggctcta ctcgcctgac ggcggcggcc
    13381 ataccggcaa cggcacgcag cgcgaagccg ccgacgaact cgcctgcgtg ttgctgtttt
    13441 tgaaagagtt tttgggctaa gggcggggag cggcactgcc gccgcgaatg aaaaaaggtc
    13501 gtctgaaact gctttttcag acgacctttt ttaatggttg tttcaaatca aaatatctat
    13561 gccgccggcc ccatcagcac ttcttcacat ccgaaggcaa aaatccgtaa tgccgtctga
    13621 acgcttcgtt gaaccgtccc gcgtggcggt agccgcaaaa gtgcatggcg gcttggacgg
    13681 tgctgccgga ttcgatgagg gcgagcgcgt gttccagccg caggcggcgc aggcatccgg
    13741 cgacggtttc gccggtttgc gctttgaaat agcgtttcag gtagcattcg ttcagtccga
    13801 cgcggcgggc gatttcggcg atggtcagcg gacgggcgaa ttcgtgttgc aggatgtcgg
    13861 cggcttcgtc tatgcgccga cggcggtaac cgttgtcgtg gcggcggaag gtgaagcgca
    13921 ataatcgggc ggagagttcc agcgcggcgg cttcgtcggc aagcaggccg aagccgtccg
    13981 attcgaacgg gcgttgcagc agtgggcagg ccgccgccgt cagtgccgct gcgttttgcg
    14041 ccagccgttg cagggcgaat cggcctatcg tttgcggcga aaacaggcgt tcgtccagca
    14101 agccttcgtc gtgccagcgg cgcagttttt ccagcgaaaa atccaaatgc agcgcgcaca
    14161 tgccgctgtt gtcgggcagc agggtttcgg atacgtccgc caactcgccg cgtaccagcc
    14221 agatttcgcc ggcagacggg cggtattccc tgccgcccat ttgtaaccgg ttctgccccg
    14281 acaccatgac gaacaaggcg cagttgtggc tgaaattgtg gatttcggtg ggaaacgcgc
    14341 ccgttccgcc gccgcgcatc cgcgacaagg tgatgcccga gtcgaagcgg ttgatgcaca
    14401 tttccagatg caaaccgggc tgttttgcct gcgcaatgag cgcgctgtcg gaacagccgt
    14461 ccaacgccca gccggattta tcggagcgga cataggtttg gtactggcgg tagatggcgg
    14521 cggtgttcat gattggatag gaacgagttg tctaacaaat gaattaaata ggaattatta
    14581 ccaataatca agcgcaggga ttggttgaaa cggaaaaggt cgtctgaaag ggtgtttcag
    14641 acgacctttt ccgtatcggg aatttgtttt gccgtatcgg gaattttgcg ttttgcggcg
    14701 tggtttctgc aggttgtttg cttaataata aacattctta ttcgtatgca aaggaaccgc
    14761 acaccgtgaa accgcgtttt tattgggcag cctgcgccgt cctgctgacc gcctgttcgc
    14821 ccgaacctgc cgccgaaaaa actgtatccg ccgcatccgc atctgccgcc acactgaccg
    14881 tgccgaccgc gcggggcgat gccgttgtgc cgaagaatcc cgaacgcgtc gccgtgtacg
    14941 actgggcggc gttggatacg ctgaccgaat tgggcgtgaa tgtgggcgca accaccgcgc
    15001 cggtgcgcgt ggattatttg cagcctgcat ttgacaaggc ggcaacggtg gggacgctgt
    15061 tcgagcccga ttacgaagcc ctgcaccgct acaatcctca gcttgtcatt accggcgggc
    15121 cgggcgcgga agcatatgaa cagttggcga aaaacgcgac caccatagat ctgacggtgg
    15181 acaacggcaa tatccgcacc agcggcgaaa agcagatgga gaccttggcg cggattttcg
    15241 gcaaggaagc gcgcgcggcg gaattgaagg cgcagattga cgcgctgttc gcccaaacgc
    15301 gcgaagccgc caaaggcaaa ggacgcgggc tggtgctgtc ggttacgggt aacaaggtgt
    15361 ccgccttcgg cacgcagtcg cggttggcaa gttggataca cggcgacatc ggcctaccgc
    15421 ctgtagacga atctttacgc aacgaggggc acgggcagcc tgtttccttc gaatacatca
    15481 aagagaaaaa ccccgattgg attttcatca tcgaccgtac cgccgccatc gggcaggaag
    15541 ggccggcggc tgtcgaagta ttggataacg cgctggtacg cggcacgaac gcttggaagc
    15601 gcaagcaaat catcgtcatg cctgccgcga actacattgt cgcgggcggc tcgcggcagt
    15661 tgattcaggc ggcggagcag ttgaaggagg cgtttgaaaa ggcagaaccc gttgcggcgg
    15721 ggaaagagta gggagtcgtc tgaaaacgga gtttccgaag gaagcggggg gtttctgcga
    15781 agctaaagtg cggtttcaac gaattgaaaa gcagcctgta tgttgaaaat accgctcaag
    15841 caaacctacg gtttgccgcc ctctccctag ccctctccca cagggagagg ggattggggt
    15901 gcaggctgcc tttaaggttt aggcaaattt ttaacttcgt tgaagctgcg atttcagaag
    15961 ctccgtttta gcttcgcaga aactccgctt ccttcgaaag ctccgttttc agacgacctt
    16021 ttggagtacc gcaggcacac gcatcgaacg gctgaatcaa agttcagacc gatggcagcc
    16081 cgcacccgag tttatgcggc aaacagcgag gctacggcaa cccgtcccct ctccctgtgg
    16141 gagagggtta gggagagggc agtaagccgt aggcttacat caaagtcgat aacgctttca
    16201 caaagcctgt gtgcactgaa aactgaaagg tcgtctgaaa acggagcttt cgaaggaagc
    16261 agagtttctg cgaagctaaa accgaagctg caaaaaatcg aaaagcagcc tgcacgttga
    16321 aaatgccgcc caagcaaacc tgcggtttgc cgccctctcc ctagccctct cccacaggga
    16381 gaggggattg gggtgcaggc tgcctttaag gtttaggcaa atttttaact tcgttgaagc
    16441 tgcgatttca gaagctccgt tttcagacga ccttttggaa caccacaggc acacgcatcg
    16501 aacggctgaa tcaaagattc agaccgatgg cagtccgcac ccgagtttat gcggcaaaca
    16561 gcgaggctac ggcaacccgt cccctctccc tgtgggagag ggttagggag agggcagt
//
LOCUS       DBBZYD010000043        16511 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.043, whole genome shotgun sequence.
ACCESSION   DBBZYD010000043 DBBZYD010000000
VERSION     DBBZYD010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16511
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.043"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            37..192
                     /locus_tag="ACJJDL_001143"
     CDS             37..192
                     /locus_tag="ACJJDL_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573867.1"
                     /translation="MYTGHYGGNTVWEAAASRGIGTAGDAPMPSGVKAGQSAVWKKAM
                     ESVGRRS"
     gene            complement(308..1114)
                     /locus_tag="ACJJDL_001144"
     CDS             complement(308..1114)
                     /locus_tag="ACJJDL_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7573868.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(1115..1861)
                     /gene="pssA"
                     /locus_tag="ACJJDL_001145"
     CDS             complement(1115..1861)
                     /gene="pssA"
                     /locus_tag="ACJJDL_001145"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HGG7573869.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(1935..2060)
                     /locus_tag="ACJJDL_001146"
     CDS             complement(1935..2060)
                     /locus_tag="ACJJDL_001146"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573870.1"
                     /translation="MPSNNIHPAKIRNNTPGGRQSQTAPQSIRHQKNKPPPRASS"
     gene            2444..2926
                     /locus_tag="ACJJDL_001147"
     CDS             2444..2926
                     /locus_tag="ACJJDL_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HGG7573871.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGVMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(2978..4189)
                     /locus_tag="ACJJDL_001148"
     CDS             complement(2978..4189)
                     /locus_tag="ACJJDL_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HGG7573872.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            4412..6850
                     /locus_tag="ACJJDL_001149"
     CDS             4412..6850
                     /locus_tag="ACJJDL_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG7573873.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNSKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAGAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDNPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            7058..8368
                     /gene="tig"
                     /locus_tag="ACJJDL_001150"
     CDS             7058..8368
                     /gene="tig"
                     /locus_tag="ACJJDL_001150"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HGG7573874.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            8464..9078
                     /gene="clpP"
                     /locus_tag="ACJJDL_001151"
     CDS             8464..9078
                     /gene="clpP"
                     /locus_tag="ACJJDL_001151"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HGG7573875.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQL"
     gene            complement(9132..10397)
                     /gene="ispG"
                     /locus_tag="ACJJDL_001152"
                     /gene_synonym="gcpE"
     CDS             complement(9132..10397)
                     /gene="ispG"
                     /locus_tag="ACJJDL_001152"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HGG7573876.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKITLKGDNIASEFL
                     AIVEEYVKTNYGENSSKRNKGKVIPIQSL"
     gene            complement(10413..11174)
                     /gene="pilW"
                     /locus_tag="ACJJDL_001153"
     CDS             complement(10413..11174)
                     /gene="pilW"
                     /locus_tag="ACJJDL_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HGG7573877.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQKSFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(11177..12271)
                     /gene="rlmN"
                     /locus_tag="ACJJDL_001154"
     CDS             complement(11177..12271)
                     /gene="rlmN"
                     /locus_tag="ACJJDL_001154"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HGG7573878.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(12415..12840)
                     /gene="ndk"
                     /locus_tag="ACJJDL_001155"
     CDS             complement(12415..12840)
                     /gene="ndk"
                     /locus_tag="ACJJDL_001155"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HGG7573879.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPAEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(12899..14050)
                     /gene="zapE"
                     /locus_tag="ACJJDL_001156"
     CDS             complement(12899..14050)
                     /gene="zapE"
                     /locus_tag="ACJJDL_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HGG7573880.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKDSGG"
     gene            complement(14441..15268)
                     /gene="fghA"
                     /locus_tag="ACJJDL_001157"
     CDS             complement(14441..15268)
                     /gene="fghA"
                     /locus_tag="ACJJDL_001157"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HGG7573881.1"
                     /translation="MKLIEQHQIFGGLQQVWAHDAQTLQCEMKFAVYLPNNSENQPLG
                     VIYWLSGLTCTEQNFITKSGFQLYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWATNYQMYDYILNELPDLVEANFSTNGKRSIMGHSMGGHGALVLALRNRK
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGEDREKWQQYDASSLIQQGYKVQGIRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            complement(15277..16386)
                     /locus_tag="ACJJDL_001158"
     CDS             complement(15277..16386)
                     /locus_tag="ACJJDL_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HGG7573882.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINKAFDLMHEGKSIRAVIHY"
BASE COUNT         4052 a         4082 c         4379 g         3998 t
ORIGIN      
        1 ttaataactt atatatatga ttgcaaaggt tgcggcttgt ataccggtca ttatggcgga
       61 aataccgttt gggaggcagc cgcatcgcgt ggaatcggca cggcaggcga tgcgccgatg
      121 ccttcgggcg tgaaggcggg gcaatcggca gtttggaaaa aggcaatgga atctgtgggc
      181 agaagaagtt aagggtaaaa gtcgggcgca cggtcaggtt gtctgtcctt ttgtcggaac
      241 aggagactgg gcagctttgt cctgattaat tgcttgtgca aacggtaaaa aggttttttc
      301 gtgtgtttta aagcaggttg tacagcattt ttccggcaat caaaagcaac ataatgccga
      361 aggatttttt gagtttggca gaagaaagtt tgtgggcggt tttgacaccg agcggggcaa
      421 aggcaatggt tgccgcgctg aggacggcga cggcgggcag gtaaaggaag cccagtgacc
      481 cttcgggcaa tcctgcaata ttcaggccgt tgagcagata cgatattgcg ccggagagtg
      541 caatcggcca ggcaaggccg gatgatgtgc cgatggcttt atgggcgggg aagccgcagt
      601 ggattaagaa ggggacggaa agtgaaccgc cgcctatgcc gacccagctc gacattgtgc
      661 cgaacagtgt ggaaaccgca gtcagtccgg gcagtccggg cagcgggcgg gatgccgtct
      721 gagggtcggt atgcagtgtt ttgaatgcga cggcggttaa aaacaggatg aagaaaattt
      781 gaagcccgaa cgcggggata tattttgcgg agagtgcgcc cgtgaatacg ccgaatatca
      841 tacccggcat catcgcaaat acggttttcc agtcgaccgc ctgttttttg tgctgcccca
      901 acatactgga aaaggcggtg aagaccatga cggcgaagga tgtgccgacg gcgaggtgtt
      961 gcgcgtaagg atgttgtgcc aaaccctgca aatcaagtac ccataaaacg acagggacaa
     1021 tcagcgtgcc gccgcctacg ccgaacagac cggcaataaa acctgccgca ctgcctacgg
     1081 caagcaggat taagataatg tcccaatgcc acatttaatc cgcctttctg tattttttcc
     1141 agaatcggcg tgccgccata atgtagccgg acaggctgta tccgagaaag aacaggaaga
     1201 ggacgagcga cggttcccaa gtgaccagaa gcagcaataa gacggcaagc agcattccga
     1261 caaaggggac ttgtctgcgg atgttgattt ctttaaaact ccaaaaaggg atttggacaa
     1321 tcatcgacag gccggcaaac agtgtgatgc ccaatgccca ccagtggacg gcggggaatt
     1381 tttcgacgct gtggttgacc caaatcagcc cgacaatcag cgcggcggca gtcggactgg
     1441 gcacgccgat aaaccagcgt ttgtccacct tgccgatgag tgtgttgaac agggcgaggc
     1501 gcagggcggc gcaggcgcag tagatgaagg cgacggaata accgattttg ccgaactgcc
     1561 aaagctgcca tttgtaggca atcagagcgg gagcaacgcc gaagctgacc atatcggcaa
     1621 ggctgtcgag ctgctccccg aacgcgcttt ggctgttggt cagccgcgcc acgcgcccgt
     1681 ccataccgtc cagcaacata gagatgaata ccgcgatggc ggcggtttca taacgtccgt
     1741 gcatggattg ggtgattgcg taaaatgcgg aaaacagcgc ggcgatggta aaggagttgg
     1801 gcagcaggta gatactgttt tgacgcaggg agcgttgcgg ggtgttggtc ggggtttcca
     1861 tagctgaagt gtctcacgga cgtggagaat cgatagggga ttataaccca aaccattatc
     1921 gaacaatacg ccctttagga tgaagccctc ggaggcggtt tgtttttctg atggcggatg
     1981 ctttgcgggg cggtttgact ctgcctgcca ccgggtgtgt tgtttcggat ttttgccgga
     2041 tggatattgt tgctgggcat ttctgggctt gccggaaggt atcgggggga gggcatcgga
     2101 atatgcggcg caccgttcaa accggggcgg cgtttcccta ttttcagggg gttgcaggtt
     2161 tcaacaaatt gaaagatatt ttttgcattt ccgaccgtat gctgattttg aagcgggata
     2221 aattatagga caaggttttt cgcccgccgc aaaggttggc cgcaatgccg tctgaaaaca
     2281 acggcttgcc gctaaggcgg cggtatgcgg atttgcgctg ccgaaatcgg tttgccatac
     2341 ccggcggtgc aatctgcggg gagggataag ccgataaggc gggacttatc ctgttttttg
     2401 tttataatgc aacagaattt ggacgaaccg tcgggaattt atcatgatga aaaagatact
     2461 ggccgtatcg gcactatgcc tgatgactgc ggcggcacgg gctgccgata cttacggcta
     2521 tctcgccgtt tggcagaatc cgcagaatgc ggacgatgtt ttgcaggtta aaactacaaa
     2581 agaagattcg acgaaaagcg aagcgtttgc cgagttggaa gccttttgca aaggtcagga
     2641 cacgcttgcg ggcattgccg aagacgagcc gaccggatgc cggtcggtcg tgtcgctgaa
     2701 caatacctgt gtcgcgctgg catacccgaa agccttgggc gtgatgcgcg ttgaaaacgc
     2761 cgtcgtgatt acttctccgc gttttacgag cgttcatcag gtcgcactca accagtgcat
     2821 caaaaaatac ggcgcacagg gacaatgcgg cttggaaaca gtgtattgca cgtcttcttc
     2881 ttattacggc ggaactgtgc gctctttgat tcaaaatctc aaataaaacg gaaaatgccg
     2941 tctgaaagat gttcagacgg catttctata tcgacggtca ggattctttc ggatcgggca
     3001 gcaggctgtt caacataatg gcaagtacgg cgcacaagcc cacgccggca aagctgaagc
     3061 tgcccaattt gagcgtcatg ccgccgatgc ccgtggtcag taccgagctg acgatgacca
     3121 ggtttttcgg cagcatcaaa tcgactttgg catcaatcag cgttttcacg cccaaagaag
     3181 caatcgtgcc gaacagcagc agcataatgc cgcccattac tggcatcgga atggaagcca
     3241 aaaacgcatt gaatttgccg aaaaacgcca tgcagacggc aaaaaccgcc gcccaagtca
     3301 tgatgacggg gttgctgttt ttggtaatca ttaccgcacc cgttacttcg ccgtaggtcg
     3361 taaccggcgg gccgccgatc agacccgcaa cgcatacgcc caaaccgtcg cctgcaaggg
     3421 ttttgtccaa gcccgggtct ttcgtatagt ctttccccgt cacattgccg attgccatga
     3481 tgccgccgat gtgttcgatg gcgggggcga cggcaacggg cagcataaac agtgcagcct
     3541 gccagttgac ctgaggcgtt tcaaaatggg gaacggcgaa ccagggcgcg tgtgcaatgc
     3601 ttgccgtgtc caccagtccc atcagcagtg ccaaaacata acccgaagcg acaccgatca
     3661 agataggaat cagcttcatc atcctgctgc cgaaaaccga tacgatggcg gtaacggcaa
     3721 aggtaaagcc ggaaagaatc agcgaatcgg tatagtcgat gacctgtttg ccgtccgcct
     3781 gacccattgc catgctgctt gccgccacgg caacagacag accgatgacc atgatgacgg
     3841 ggccgatgac gaccggaggc agcagtttgt gtaccgctgc cagtccgcgc caacggatca
     3901 gcgcggcaaa cacaaaatac ataaagccgg cggcaaacag tccgaacatg gtggaaggca
     3961 gcccccattc gccgacggag tagataatcg gtgcgataaa ggcaaacgaa gaaccaagaa
     4021 aaatcggcac tttgcgtttg gttgtgattt ggaacagcag cgttcccaag cctgcgccca
     4081 aaagcgcaag agccggattc agaccggtca gcaggggaac cagcaccatt gcgccgaatg
     4141 ccacaaataa aatctgtgca ccggaaacgg caagtttcag ttggtttata ccatcttctt
     4201 tcaatcggtt caaacggcac ggattatact ggtttgccga gggtctgcgt aaaaatacat
     4261 atggcgggca acagatatgc cgtctgaaag gcaatgtctg tctgttgcag gatgaaagca
     4321 ggagaaatgg agtataatcc gacactttcc atattcaatc cgcaagccgt ccggcttcct
     4381 tatttcagac ggcattttcc ggtaatacgg catgacagaa aaatcccata aaaaaacagc
     4441 aaaaggcagg gcgggaagcc cgtccccaac gtccgcacgc aacaagaaag ccgacaacgg
     4501 cgcacggggc aataaagttt ccgagcggct caaggcggtc aaagagttgc agaaaaccga
     4561 aaccaaaaag gcgcgtcccg aacatgtcgt caaccttatc ggcgacgcac tgtggctgat
     4621 gggtttggcg gcaaccctgt atttggcgat ttccctgatc agtttcgata tgggcgatcc
     4681 gtcttggtcg cacagttcgc cggttgtgga agatgtcgcc aattggggcg gactgttcgg
     4741 cgcgtatgtt gccgatgtcg gctattatct tttcggctgg tcgttctggt ggtggatagc
     4801 ggctgcctgc gtcatgctgt ataaaaattt tcgtctgcac gcaaaacaga cggaaaacga
     4861 ggcatacaac cacaaaatcg ctgccgccgc gctgtttgtc ctgacggtct tcagccccgt
     4921 cttggagtat tttgtgctgg gcggaaaata tgccgactcc ctgcctgtcg gagcaggcgg
     4981 tatggtcggc atacgcgtcg gcgcagtgtt tgcgtggctg ctggggaaat cgggcagcct
     5041 gctgattatc ttggttgttc tgctgttgtc gttgtccctg ctggtgcaga tttcatggct
     5101 ggaatttttg aacggtgcgg gcagggcggt tcaaaaccgc ctgagtgcct tatccggcaa
     5161 ggtcatggct ttaggaaaac gccggccgaa tagcaaaaca gacggtgtcg atacccaaaa
     5221 tacacggcgc atggtaaaag aagccaagaa tattacggcc aaacccgttg ccttgcccga
     5281 aggcagcagc agcaaccgca aatccgtcgc ggtttccgtc gcgccgccgc ccaaaattca
     5341 ggtttctctg tttgaagatg acgaacctcg gcaggcgggc gaataccaca agcctacatt
     5401 gaacctattg cggattcctg acagcgaacc cgtcagcatc aatcccgccg aattggagcg
     5461 cactgccgaa ctgatcgaat ccaaactggc agaattcggc atcggcgtac aagtcgtatc
     5521 cgccacatcc ggccccgtca tcacgcgcta cgaaatcgaa cccgcgcaag gtgttaaagg
     5581 cagccaaatt gttgccttgt cgaaagattt ggcacgctct atgtcgctgc agtccgtgcg
     5641 tatcgtcgaa accatcgcag gtaaaaacac gatgggcatc gagttgccca acgataaacg
     5701 ccaagacgtg atgttgagcg aaatcttgtc ctcgcccgtg tttgccggag ccaaatccaa
     5761 gctgaccgtc gcgctgggca aagacattgc cggtaccccc gttgtcggcg acttggcgaa
     5821 aatgccgcac cttttggtcg ccggtatgac tggttcgggc aagtccgtcg gcgtgaacgg
     5881 catgattatg tctatgcttt tcaaagctac gcccgacgaa gtccgcttca ttatgataga
     5941 cccgaaaatg ctcgagttga gcatttacga cggcattccg cacctgctct gtcccgtcgt
     6001 gaccgatatg cgcgaagcag ggcaggcgtt gaactggtgc gtcgccgaaa tggaaaaacg
     6061 ctaccgcctg ctttcccacg ccggtgtacg caatctggaa ggcttcaacc aaaaagtcga
     6121 agccgcaaaa gcggcaggca agccgctgct caatccgttc agtctgaacc ccgacaaccc
     6181 cgagcctttg gaaaaactgc cgatgattgt ggtcgttatc gacgaacttg ccgacctgat
     6241 gatgaccgaa cgcaaagccg tcgagcagca aatcgcccgt ctcgcccaaa aagcgcgcgc
     6301 cgccggtatc catatgattg tcgccaccca acgtcccagt gtcgatgtcg ttaccggcct
     6361 gattaaagcc aacatcccga cgcgtatggc gtttaccgtg caaagcaaaa tcgacagccg
     6421 taccatcctc gaccaaatgg gcgcggacga actgctcaaa tatggcgatt cgctgttcct
     6481 ccagcccggc agtgccgaac cgactcgcct gcaaggcgcg tttgtttcag acgacgaagt
     6541 acatcaagtc gtcaactacg tcaaatcgca agccccagcc gactatattg aaggtctgct
     6601 cagcggcgag gccgcgctgg aaactgccaa tatcgttaat ccgaatgcag acagcgacga
     6661 attgttcgat caggcagtcg cctatgtttt ggaaagcaaa aaaacctcca tttcgtcttt
     6721 gcagcggcag ttgcgtatcg gctataaccg cgcggcaaac ctgatggagg cactggaaaa
     6781 tgcgggtgtc gtttctccca ccgacctcaa cggcagccgt aaaattttgg cgcacaagga
     6841 ccatttgtag ctcgtattgc aaaatgccgt ctgaacggcg gaattggcgt ttcagacggc
     6901 atattatgtt tcaggcgaaa cattgtgata tacttgccag ctaaaatttc ccctttgcgg
     6961 caatgcggtt caaatatcgt accgttgcgc tgtttgcttc cccatgtagg gaagaaagtt
     7021 tatcatttta tcaacacaac aaatttaagg gcttatgatg agcgtaactg ttgaaacttt
     7081 agaaaatctg gaacgcaaag tagtgttgtc cctgccttgg tccgaaatca acgcagaaac
     7141 cgataaaaaa ctgaaacaaa cccaacgccg tgcaaaaatc gacggtttcc gtccgggtaa
     7201 agcaccttta aaaatgattg cccaaatgta cggtgcgagc gcacaaaacg acgtgatcaa
     7261 cgagctggtg caacgccgct tctacgatgt tgccgttgcc caagagttga aagtggcagg
     7321 cttcccccgt tttgaaggcg ttgaagaaca agacgataaa gagtctttca aagttgccgc
     7381 catttttgaa gtgttccccg aagtcgttat cggcgatttg tctgcacaag aagttgaaaa
     7441 agtaaccgct tccgtcggtg atgccgaagt ggaccaaacc gtagaaatcc tgcgcaaaca
     7501 acgcacccgc ttcaaccatg tcgaacgcga agcccgaaac ggcgaccgcg tcatcattga
     7561 ctttgaaggc aaaatcgacg gcgaaccttt tgccggcggc gcatccaaaa actacgcctt
     7621 cgtattgggc gcaagtcaaa tgctgcctga atttgaagcc ggcgtagtcg gcatgaaggc
     7681 tggcgaaagt aaagacgtta ccgtcaattt ccctgaagac taccacggta aagacgttgc
     7741 cggtaaaact gccgtgttca ccattacgct gaacaacgtt tccgaagcga ctctgcctga
     7801 agtcgatgca gattttgcaa aagccttggg tattgcggat ggcgacgttg ccaaaatgcg
     7861 cgaagaagtg cagaaaaacg taagccgcga agtggaacgc cgcgtaaacg aacaaaccaa
     7921 agaatccgta atgaacgcgc tgctcaaagc cgtagagctg aaagcacctg ttgctttggt
     7981 caatgaagaa gccgcacgct tggcaaacga aatgaaacaa aattttgtta accaaggtat
     8041 ggctgatgct gccaacttgg atctgccttt ggatatgttc aaagaacaag ccgaacgccg
     8101 cgtgtctttg ggtctgattt tggccaaact ggttgatgaa aacaaactgg aaccgactga
     8161 ggagcaaatc aaagccgttg tcgccaactt cgcagaaagc tacgaagatc ctcaagaagt
     8221 aatcgactgg tactacgcag agccttcccg cctgcaagcc ccgacttctt tggcgataga
     8281 aagcaacgtc gttgatttcg ttttgggtaa agccaaagta aacgaaaaag ctttgtcttt
     8341 tgacgaagtg atgggcgcgc aagcctgatt atcctgaaaa tgccgtctta gggcagtttt
     8401 tgaaagcacc gaagccgctt ttaaagcccg ctttggtgct tttacatcat gaaaggagac
     8461 gaaatgtctt ttgataacta tcttgtccct accgttatcg agcagagcgg tcgcggtgag
     8521 cgtgcattcg atatctattc ccggcttttg aaagagcgca tcgtattctt ggtcggcccg
     8581 gtaaccgacg agtccgccaa tctggtggtt gcccaactgt tgtttttgga aagtgagaat
     8641 ccggataagg atattttctt ctatattaac tcgccgggcg gttcggtaac ggccggtatg
     8701 tcgatttacg acaccatgaa ttttatcaag cccgatgtat cgactttgtg cttggggcag
     8761 gcagcaagta tgggcgcgtt cttattgtcg gcaggcgaaa aaggcaaacg tttcgccctg
     8821 cccaacagcc ggattatgat tcaccagcct ttaatcagcg gcggcttggg cggtcaggca
     8881 tccgatattg aaattcacgc acgcgaactg ttgaaaatca aagaaaaact caaccgcctg
     8941 atggcgaaac attgcggccg cgatttggca gatttggagc gcgacaccga ccgtgataat
     9001 ttcatgtccg ccgaagaggc taaagaatat ggtctgattg atcaaatctt ggagaaccgc
     9061 gcttctttgc agctttaata agaaacctga gagagacaaa tgccgtctga acatttcaga
     9121 cggcatttat tttatagaga ctgtatcggg atgacttttc ctttattgcg tttagaactg
     9181 ttttcgccat aattggtttt aacatattcc tctacaatag ctaggaattc gcttgcaata
     9241 ttatcacctt tcagtgttat tttgcgctcc ccatctacat aaaccggcgc gacgggtgtt
     9301 tcccccgtac cgggcaggct gatgccgatg tcggccaatt tgctttctcc gggcccattg
     9361 acaacgcagc ccattacggc aacgttcagg gattcaaccc cgggataaag ggtacgccat
     9421 atagacattt tttggcgcag gtaattttga acatcttgtg ccagctcttg aaatacggta
     9481 ctggtggtac gcccgcagcc ggggcaggcg gtaaccatcg gcgtaaacga acgcaatccc
     9541 atagtctgta aaatctcttg cccgacgacg acctcctgag tacgcgggct gccaggttcc
     9601 ggagtcagtg aaatgcggat ggtgtcgccg attccttctt gaagcaagac ggataatgcc
     9661 gccgttgatg cgacaatgcc tttgctgccc ataccggctt cggtcaaacc caaatgcagc
     9721 ggataggcgc aacggctgcc cagttcgcgg taaacctgaa tcaaatcctg aaccgcgctg
     9781 actttgcacg acaggatgat tttgtcttcg ggcagtccca atagaacggc tttttcggca
     9841 gattccaaag cggagacaat cagtgcttcc ttcgtcactt cttcgggcgg tttcggcgcg
     9901 gaagaagcga ggttggcatc catcatacgt ttggcgaggc tttgatccaa agaaccccag
     9961 tttacgccga tgcggacggc tttatcgttt tcagcagcag tccgaatcat aaaggcaaat
    10021 ttttcatcgc cttttacgcc tttgccgaca ttgccgggat tgatgcggta tttggacaat
    10081 gctttgccgc attctggaaa ttccgccaac aggcgttcgc cgttgaagtg gaaatcgccg
    10141 ataagcggtg tggcatagcc catatcgtcc aagcggcggc ggatttcggc aactttggac
    10201 gcggcttcgg ggctgttgac ggtaatacgc accatttcgg atccggcatc gctcaattcc
    10261 ttaatctgca atgcggtggc ttttgcatcg gcagtgtcgg tgttggtcat agattggata
    10321 acgacgggtg cttctgaacc gacggtaata tgatcgatgc ggacttgatg cgtcttgcgg
    10381 cgttggagtg tgttcatatg gtttgaatct gtttattgac cggtgaggac ggtttgcaat
    10441 tcttccgagt aggggaaatt cgcctgcaat tgtgcttcat attcgtatgc cgcctgtgcg
    10501 ttgccgaggg ctttggcaat tttccagcct agcagcaaat catcggcctg aaggacttct
    10561 accctgcttt ggtatttttt aaagtagtaa tcggcatcgc ccaactgccc ggccagcatt
    10621 ttggtgcgcg ccagttcttt aaatgcgggt gggaactgcg gctgggcggc gagggaacgt
    10681 ttcaaatagg cttccgccaa tccgaattgc ccctgttttg cgctgcatat gcctttattc
    10741 aggttggcaa tataaggggt cgggtaggtg gggtcggcca gggctttgtc gaaatatgcc
    10801 atagattcgg cagggcggtt gagcctgccg cacaggaacc aaccgtagtt gttgttgatt
    10861 tcggcactgt cgggtttgat ggagagggct tgccggaaac ttttctgcgc cttgtcgtta
    10921 actttcaggt attggtagat ttcggcacgg accagccagg caagctcgtt tttagggtct
    10981 gatttcaggg cgtcttcaat acttgccgtc gcctgacggt agtcctgacc gcgcatatat
    11041 tccattgcca actgggtttt gatattggaa acctgattgg ctttttctgc ccgcgagggg
    11101 cggtaggaag tgctgcacgc gcccaaggca aggacaagta ataaagagat tcgtttggat
    11161 ggcttaaaag gcataattac ccctgttgtc cgattaaaat ctgctgccat ttttgttggc
    11221 ggcgcgtttt atcctgaacc tgccccgcca actgtccgca ggcggcatcg atgtcgtcgc
    11281 cgcgcgtttt tcgtacggta acgacaaatc ctgcctgctg caaaatatcg cggaacacac
    11341 ggatgttctc attgctggag cgttcgtatc cggagtttgg gaagggattg aacggaatca
    11401 gattgaactt gcagggaaca tctgtgacca gttcgatcag ttcgcgcgca tgttgcgcct
    11461 tatcgtttat tccgtccaac atgacgtatt cgaaagtgat gaaatccctg ggtgctttga
    11521 ccagatagcg ttggcatgcg gccatcaatt ctttcaaggg atattttttg ttcaacggta
    11581 cgatttggtt gcggacttcg tcattggaag cgtggaggga aaccgccaaa gccaccggca
    11641 tgacatcgcg caacctgtcc atttggggaa ccatacccga agtggaaacg gttacgcggc
    11701 ggcggctcaa accgtagccg tggtcgtcca gcatgatgct taaggcggta acgacattgt
    11761 cgaagttcgc catcggctcg cccatgccca tcatgacgac gttggaaatc acgcgctcgt
    11821 ttttcggtgt aacgcccatc gctttgtttg cccaccacaa ttgcccgatg atttcggcag
    11881 cagtcaaatt gcggttgaag ccctgccggc cggtcgaaca aaatgtacat tccaaagcgc
    11941 agccgacttg tgaggaaatg cagagcgtgc cgcgatccga ttcggggatg aagacggttt
    12001 ccaccccgtt gcccgtaccg acatccaaaa gccattttcg agtgccgtct gaagattttt
    12061 gagacatcat cagcttggga atttcgatgc ctgcctgttc gttcagttta tggcgcaacg
    12121 attttgccaa atcggtcatt tcgtcaaaat tttgcgcgcc ggattggtgc atccaacgca
    12181 taacctgttt ggcacggaaa ggtttttcgc ccatatcggc aaaatgtcgg gtcagccctt
    12241 ggaggtcgta gttgagcaga ttggttttca tgtatttgtg tttttcttaa attaaggctt
    12301 caaataaaaa attgcagggc aggcaagttt gatttgaagc cttttgcaac agagttttca
    12361 gacggcatgg atatatttta tgccgtctga agaggagttg tgcggtgtat tgtatcaacg
    12421 ggggcagatt tcggtttggc tgaaaaagta ggcaatttcc aaagcggcat tttccggagt
    12481 gtccgagccg tgtacggcat tgatgctgac cgaagtggca aagtccgcgc gtatcgtgcc
    12541 ttcggcggct tcggcgggat tggtcgcccc catcagttcg cggtttttca gaacggcgtt
    12601 ttcgccttcc agtacttgaa tcataaccgg accgccggtc ataaattcaa ccaatccggc
    12661 gtagaagggg cggtctttat gaaccgcata aaattcttgc gcctctttga gggtaagctg
    12721 cttcattttg gcggcaacga ttttcagacc gttctcctca aagcggctgt atattttgcc
    12781 gatgacgttt ttgccgacgg catcgggttt gatgatggag atggtacgtt caatcgccat
    12841 gctatatcct tatttttact taagaagaat caaatcggta ttctatcaaa aaaataactt
    12901 atccgcctga atccttggga gatagggtca ggtgcggctg ttccaaataa acttcggact
    12961 gcatttcgac catccggctg gcggtgcggg taaattcttc ggcaaaatcg ccttccgtat
    13021 agatatggtt gacatctacc gcgccggtgg cacacagttt gacccggaaa tcgtagagta
    13081 cgtcaatcag ccaagtcagc cgccgcgcct ccgccttttc ttgcggtgag agttgttcca
    13141 aacctgaaat aaaaaccatt tcataatgtt cggccaaata cagatagtcg gactgtgagc
    13201 gggggccgaa gcacagtgcg cggaaatcaa accatatggc acggccggac tcggctttgt
    13261 ggggaatctc ccgaccgtgg atggtgctga tgccggggtt caaatcggta atgcctgtca
    13321 tttctttgaa cagttttgcc agttttgcct cattttcttc attggcaggc gtaaagaaaa
    13381 tctcggcggg gcggagggta cgcagtcggt agtcttcacc gccgtcaacg tttaagacgg
    13441 tcaggctgga ctcgatgagc gcgattgtgg gaagaaaact gctccggttt tgaccttgcg
    13501 ggtagagttc ggaaggcgcg tagtttgaag tcgccaccaa aacaacgccc tcgttaagca
    13561 ggttttccag cagacggcct aaaatcattg catccgcaat atcgctgaca tgaaattcgt
    13621 caaaacataa tacgcgggtt tctttggcaa tctcggcggc aacggatttc aacgggttgc
    13681 tttcgctttt cagggttttc agcctctggt ggatttctgc cataaaggca tgaaagtgga
    13741 cgcggcgttt gcggcggtaa gggaggcagc cgaaaaaagc gtccatcaga aagcttttgc
    13801 cgcgtccgac cccgccatag aaataaagcc ctttggggac ttgcggggaa cgcaaactcc
    13861 tgcctaaaaa acggtttctt ttgcgtttga acatcatcaa ttcggtccaa agccgatcga
    13921 ggtgttcgat ggcggctgcc tgcgcgtcgt cgcggatgaa gttgggcagt tgtgaggcag
    13981 cctgatacca ggtcagcggg ctgtggtttt caaacggcgg ggctttaaaa agttggtctc
    14041 tattactcat atttaacctt gttatacttc ttgcggcgga gaaagaaaat gcttaccgtc
    14101 ggtattataa atgatttcct tcaaacttgg cattttccgt ggaaaagaat aatgacgcgc
    14161 acaagggggt ataagcaaag gcggcgtttc aatatggtgc agatatgagc tcaaatgcct
    14221 tttatagtag attaaattta aaccagtaca gcgttgcctc gccttgccgt actatctgta
    14281 ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactataat ccgtagagtc
    14341 ggctccttcc ggctcagacg gcatacgttt atgccggcac ttcttaccgc cctcgtgccg
    14401 gctatcccaa aactgctttg aacactgaac gctctttggt ttacttcaaa aacgcggcgt
    14461 gataagcaat atgttcgcca ataaaactgg cgatgaagta ataactatgg tcgtagcctt
    14521 tgtggaagcg cacatcgacc ggctggtttg ccgcacgaca ggtttcgata aaatcttcgg
    14581 tacgcaattg tgtcggcaaa aactcatctt ccaagccctg atcaatgcgt ataccttgca
    14641 ctttatagcc ttgttgaatg agcgagctgg catcatattg ctgccatttt tcacgatctt
    14701 cccctaaata agcagtaaag gccttttctc cccaaggcac gaggcttggc gataaaatag
    14761 gcgaaaaagc agaaacgctt tgataacgtt tccgatttcg cagtgccaat accaatgcac
    14821 cgtgtccgcc cattgaatgc cccataatgg aacgtttgcc gttagtagag aaatttgctt
    14881 caaccaaatc aggcaattcg ttcaagatat aatcatacat ttgataattc gtcgcccaag
    14941 gctgctcagt tgcattaaga taaaagcccg caccttgtcc taaatcgtaa gccgcatcgt
    15001 tcggcacttg ctctccgcga gggctggtat caggggcaac cacaatcact tgatgttctg
    15061 ctgcataaag ctgaaagcct gatttagtaa tgaaattttg ttccgtacac gtcaagccgg
    15121 aaagccaata aatcacacca agcggttgat tttccgaatt atttggcaaa tagacggcaa
    15181 atttcatctc gcattgaagc gtttgggcat catgagccca aacttgctgc aaaccgccaa
    15241 aaatttgatg ttgttcaatc agtttcatcg cataccttag tagtgaataa cggcgcggat
    15301 cgatttacct tcgtgcatta agtcaaaggc tttattgatt tgatcgagtg tcattgtgtg
    15361 ggttacaaac ggttctaact caatgtcgcc tttcattgaa tcttccacca ttttcggcag
    15421 ttcagagcga cctttcacac cgccaaatgc tgaacctttc cacacacggc ctgttaccaa
    15481 ctggaacgga cgcgttgaaa tttcttgtcc tgcacctgct acgccgatga taatggattg
    15541 accccaacca cgatgtgcac tttctaatgc ttgacgcatt acgtttacat tgccgataca
    15601 ttcaaaggta tggtcaatgc cccatttgtt gatgtctaac aacacatctt taattggttt
    15661 atcgtaatcg ttcgggttca aacaatccgt tgcaccgaac tgttttgcca actcaaattt
    15721 tgatggattg gtatcaatgg cgataatgcg gccggctttg gcttgacgcg caccttgcac
    15781 caccgccaaa ccaatcgcgc ctaagccaaa cacggcaaca gagtcgcctt cttgcacttt
    15841 tgccgtatta tgtaccgcac caatacctgt ggtaacgccg cagccgagca aacatacttg
    15901 ttcatggttg gcttcagggt tgattttcgc cagtgaaact tcggcaacaa cggagtattc
    15961 actgaaagtc gaacagccca tatagtgata aatcggctga ccttgataag aaaaacgcgt
    16021 cgtgccgtcc ggcattaagc ctttaccttg tgtatcacgc actgagacgc acaagttggt
    16081 tttacctgaa caacaaaact cacattcgcc acattcggcg gtgtaaagcg gaatcacgtg
    16141 atcacccggt tttacgcttg acacaccttc gcccacagca acgaccacac ccgcaccttc
    16201 gtgtccaagc accacaggga atacgccttc aggatcgctt cctgataatg taaacgcatc
    16261 agtatggcac acgccagtgt gggtattgcg gattaacacc tcgcctttac gcggcatttc
    16321 tacgtcgatt tccacaattt gtaagggttg gttaggggcg aatgccaccg ccgcacgaga
    16381 tttgatgctt gaatcggttt gtttcatttc cattgtcttt cctcttaatt cattgacaaa
    16441 gttgccttac ctgagcaaca tagcaacagt ttacacttta gagttaactc taaggcaagt
    16501 gttttttact g
//
LOCUS       DBBZYD010000044        16286 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.044, whole genome shotgun sequence.
ACCESSION   DBBZYD010000044 DBBZYD010000000
VERSION     DBBZYD010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.044"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(210..2999)
                     /gene="ileS"
                     /locus_tag="ACJJDL_001159"
     CDS             complement(210..2999)
                     /gene="ileS"
                     /locus_tag="ACJJDL_001159"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HGG7573883.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDKPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAA
                     LAAAFGLASIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGITILAETTGDKLENLHMNHPFLERDIPMLNGDHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMRVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAQLLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCENYDKLSDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEIYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYALVLARQLQERLAGDFYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEIADYL
                     NALGEELRFALLVSKAEVKVGDELAVTAKASDGEKCERCWHYTHDVGAVAGYETVCKR
                     CAENVGREGETRHYA"
     gene            complement(3141..4061)
                     /gene="ribF"
                     /locus_tag="ACJJDL_001160"
     CDS             complement(3141..4061)
                     /gene="ribF"
                     /locus_tag="ACJJDL_001160"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HGG7573884.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPDHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIEADMEAAKCW"
     gene            complement(4360..5655)
                     /gene="tyrS"
                     /locus_tag="ACJJDL_001161"
     CDS             complement(4360..5655)
                     /gene="tyrS"
                     /locus_tag="ACJJDL_001161"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HGG7573885.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEVLVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(5718..7586)
                     /locus_tag="ACJJDL_001162"
     CDS             complement(5718..7586)
                     /locus_tag="ACJJDL_001162"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HGG7573886.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKDWLPGGFLGVDIFFV
                     ISGFLMTTILHREMSGGGRFSLKAFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFF
                     LLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVA
                     RKSLRVQFGFLAALCALSLAASFIPSALDKYYLPHLRACELLIGSLTAVWMRCRQPAV
                     GRRCAAVGALFAVCILSTCLFSYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKF
                     FQSKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAVVLILLLSLFSYHCI
                     EKPFKKWQGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNT
                     GKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASR
                     VFQNWAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRMLHK
                     LSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQALRPDDESTLKANARIRELAAK
                     YPNVYIIDAAAYIPADFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHNH"
     gene            complement(7953..9044)
                     /gene="ychF"
                     /locus_tag="ACJJDL_001163"
     CDS             complement(7953..9044)
                     /gene="ychF"
                     /locus_tag="ACJJDL_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HGG7573887.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVSGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            complement(9157..10833)
                     /locus_tag="ACJJDL_001164"
     CDS             complement(9157..10833)
                     /locus_tag="ACJJDL_001164"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HGG7573888.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLDALEKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIESQTNNFGFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            11008..11439
                     /locus_tag="ACJJDL_001165"
     CDS             11008..11439
                     /locus_tag="ACJJDL_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HGG7573889.1"
                     /translation="MGSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGHNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            complement(11670..12365)
                     /gene="murU"
                     /locus_tag="ACJJDL_001166"
     CDS             complement(11670..12365)
                     /gene="murU"
                     /locus_tag="ACJJDL_001166"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HGG7573890.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEEALGDGSAYGVNIAYSPEPEGGLETAGGIARALPLLGDAPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHHPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(12383..12883)
                     /gene="hpaC"
                     /locus_tag="ACJJDL_001167"
     CDS             complement(12383..12883)
                     /gene="hpaC"
                     /locus_tag="ACJJDL_001167"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HGG7573891.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTNLSPEERFAY
                     HIWHYGKTGQPEIEGALAHLHGHIVGQHEIGTHFVFYVRLDEIKNCVGKRPALLYFRR
                     QFRSLD"
     gene            complement(12998..13438)
                     /gene="nadR"
                     /locus_tag="ACJJDL_001168"
     CDS             complement(12998..13438)
                     /gene="nadR"
                     /locus_tag="ACJJDL_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HGG7573892.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            complement(13781..14290)
                     /locus_tag="ACJJDL_001169"
     CDS             complement(13781..14290)
                     /locus_tag="ACJJDL_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HGG7573893.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPEEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAILVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            complement(14369..14444)
                     /locus_tag="ACJJDL_001170"
     tRNA            complement(14369..14444)
                     /locus_tag="ACJJDL_001170"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14409..14411),aa:Lys,seq:ttt)
     gene            14655..15734
                     /gene="apbC"
                     /locus_tag="ACJJDL_001171"
     CDS             14655..15734
                     /gene="apbC"
                     /locus_tag="ACJJDL_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HGG7573894.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICTNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
BASE COUNT         3706 a         4413 c         4397 g         3770 t
ORIGIN      
        1 ccgtcattcc cgcacaggcg ggaatctatc ggaaatgact gaaacctcga gattctagat
       61 tcccactttc gtgggaatga cggttcagtt gcattccgac aacaccgcaa tcttgaaacc
      121 cctccgccat tatgaagaca aatcgcggca caaaaaatgc cgtctgaaat gctgttcggc
      181 ggtttcagac ggcatttgct caaactttat caggcgtaat ggcgcgtttc gccttctctg
      241 ccgacattct ctgcacagcg tttgcaaaca gtttcatagc ctgcaaccgc gcctacatcg
      301 tgggtgtagt gccagcagcg ttcgcatttt tcgccgtcac tggctttggc ggttacggca
      361 agttcatcac cgactttcac ttctgcttta gacaccagca gggcaaaacg caactcttcg
      421 cccaaagcat tcagatagtc ggcaatttct tccggagccg taatttcggc ttcggcttgc
      481 aaggacgaac cgacggtttt gtcggcgcgc aaaggctcga tggcggcggt taccgcttcg
      541 cgggcttcgc ggattgccgt ccattttttc accagttcgg cttcggcttt ttcgttgatg
      601 gtcgggaact cgtgccaagt gtggaagagg acgctgtctt cttcgccgcc gccgatgatg
      661 tcccatgctt cctcgccggt aaagcacaaa atcggtgcaa tcaagagaac taggctgcgc
      721 gtgatgtgat acagggcagt ttgcgcgctg cggcgtgcat ggctgtctgc tttggtggtg
      781 tagagacggt ctttcaggat atcgaggtag aacgcgccca agtcttccga gcagaaagaa
      841 acaatgtctt ttacggcgaa gtggaaggcg tagcgcggat agaagtcgcc cgccagacgc
      901 tcttgcagct gacgcgccag cactaaggcg tagcggtcga tttccaccat gtctgcctgt
      961 tgcacggcat cttcaatagg attgaagtcg ctgagattgg caaacaggaa gctcaaggta
     1021 ttgcggatac ggcggtagct ttcggttacg cgcttgagga tttctttgga aatcgccaat
     1081 tcgccgctgt aatcggtgga tgccgcccac aggcgcagga tgtccgcgcc gaattcgtta
     1141 tagatttcct gcggtgcgac gacgttgccg atggatttcg acattttttt accttcgccg
     1201 tctacaacga aaccgtgggt cagcagctgt ttatacggtg cgcgacccat tgatgaggca
     1261 caaccggtca acatagacga ttggaaccag ccgcggtgtt ggtcgctgcc ttcgaggtac
     1321 aagtcagccg gccattccaa ttcttcgcgt tgtttcacaa cggaataatg ggtcgaaccg
     1381 gagtcgaacc atacgtccat ggtatcggaa agtttatcgt aattttcgca atcttccgcg
     1441 ctcaagagtt cgctcttatc gagggagaac cacgcttcga tgcctttttc ttcgattttc
     1501 agggcaactt tttccaacaa ctgggcagag tttggatgca attcaccggt ttctttgtga
     1561 acaaagaaag tcatcggcgt gccccagtag cgttggcgcg aaacgaccca gtcggggcgg
     1621 ccttcgatca tggcttcgag gcgcgcgcga ccccaagacg ggaagaattc ggtgtcgtcc
     1681 acggctttga tggctttgtc gcgcagggtt ttgccgtcgg caccggcttt gtccataccg
     1741 acaaaccatt gacctgtcgc gcggtaaatc agcggcgttt tgtggcgcca gcagtgggcg
     1801 tagctgtgtt cgattttgct gcttgccaag aggttgccgg tttcttccaa ccattgcagg
     1861 ataacgggat tggcttccca aacgcgcata ccggcaacgc gtggcgtttc gctgatgtat
     1921 ttgccttcgg catttacagg gttgtaaagc tcgatgccgt atttattgca gacagcatag
     1981 tcttccaaac catgcgcagg cgcagtatgc accaagccgg taccggcatc ggtggtcaca
     2041 tggtcgccgt tgagcatggg aatatcacgc tcgaggaacg gatgattcat gtgcaggttt
     2101 tccagcttgt cgccggtggt ttcggcaaga atagtaatgc cgtctgaaaa accgtaacgt
     2161 ttgagcgcgt cttctgccaa atctttggcc aacaccaatt tgcctttggg cgtatcaatc
     2221 agttgataca ccacgtctgc gccagctgaa acagcttggc tcgcaggcaa agtccaaggc
     2281 gtggtcgtcc agataacggc aaacgctttg ccttcgatac ttgccaaacc gaatgcggcg
     2341 gcaagcgcgg cagtatcttt aaacggatag gcaacgtcaa tcgcaggcga tactttgtct
     2401 ttgtattcca cttcggcttc agccagcgaa gaaccgcagt ccaagcagaa ctgaaccggt
     2461 ttcgcgccgc ggtagagata gcccgatttg tagatttcgc cgagcatacg cacggtatcg
     2521 gcttcggttt tgaaatccat cgtcaggtag ggcttgtccc agtcgcccaa cacgcccaag
     2581 cggataaagt cttttttctg gcgggcaact tgttcggcgg cgtattcgcg gcacaattcg
     2641 cggaaacgcg ctttgggcat gtctttgccg tgcagttttt ctaccatcac ttcgataggc
     2701 aaaccgtgac agtcccaacc cggcacataa ggcgcgtcaa aaccggcttg ggttttgctg
     2761 cggataatga tgtctttgag gattttattg acggcatgac cgatgtggat gtcgccgttg
     2821 gcatatggag gaccgtcgtg cagaatgaat ttcgggcggc ctttggcgat ttcgcgcagt
     2881 ttttggtagc gtttttgctc gtaccagctt ttcagccatg caggctcgcg cttggcaaga
     2941 ttgccgcgca tcggaaacgg gctctcgagc aggtttacgg ttttactgta atcggtcatt
     3001 ttttaatctc tattgttaca atatttcggt ttcagacggc attgcgcctc aaacagtatt
     3061 tcacaacggg aaacccctat gccgtctgaa aagttaaaag attgattgta gcccaatcgg
     3121 atggtttgta taaggttttt ctaccaacac tttgcggctt ccatatcggc ttcaatctgc
     3181 cttttcagtt cttccatacc gtcaaacttt tcctcatcgc gcagtttgtg caggaagcgg
     3241 acgttcagcc gttgtccgta caggtcgcct tgaaagtcga acaggtggac ttcaagcttt
     3301 tgagaacagc cgctatcaac ggtgggattg aagccgaaac tcgccacgcc gcgccgcgtg
     3361 ccgaatgcgc cgtctgcttc gacgacaaac acgccgccga gggcataacg gtggtcgggc
     3421 aggcggatat tggcggtcgg ggcgtttagg gtgcgtccga gttttctgcc gtgcaccacc
     3481 ctgccgctca agacgtagtc gtgtcccaaa agttttttcg cataggcaag gttgccgtct
     3541 gaaagggctt gtcgcacggc ggtactgctg gtgcggatgt cttcgacgat gacggaaggc
     3601 gtacgctcgg tctgcatatc gggctgttgt gccaaaagtt caaaacagcc ttcccgcccc
     3661 gcaccgaaac ggaaatcatc gccgacgagc aaataacgcg tattcaaggt ttgacgcagc
     3721 aggcggtcga taaacccttg cgcggatatt tcggaaaaat tttgatcgaa acgcaaaacc
     3781 cagacggcat cgacacagcc tgtgccttcc aataattcga gcttggtgcg cagggggctg
     3841 atccgacacg gtggcatcct gccggtgcgg agtgcgaaaa attctttggg ttggggttcg
     3901 aaaacgacgg tcacgacggg taatccgcgc gtatcggctt cgaggcggag tttttggagg
     3961 atgtgtttgt gtccaaggtg tacgccgtcg aaattgccta tggttacggc ggccccgtgc
     4021 ggaaagtcgg gcgcgttgtg ccgccccagc ctgattctca ttgttgcgtt cgggtatgtg
     4081 gtgaaacagg cggtcattgt aaacggtatt gcggtttata gacagtgtgc cgcccgttac
     4141 gcccgcccga cgctggaaaa gcaggcaaat ttcccgccgc cgaacgcgcc aaacgcataa
     4201 agcgtgcatc aggcgcgatc ctatgtgttg aaacatcgcc ccaaacctga tgcaacatca
     4261 gtgaaaatcg ttctttttta accaggtaaa ccgagacaaa caaccctccg ccgtcattcc
     4321 cgcgcaggcg ggaatgacgg catttctgcg gcaatcggat tatttccaaa ccaaaagcgc
     4381 gtggttgcgt ttgccgcgcc gaaggatggt gtatttgccg aaacgtttgt gttcgtcggt
     4441 cagcaggcag gcatcgtcgg ggcgttcggc ggcgtggttg gggttgttgg cttcggcagg
     4501 tttgccgttg agcaaaaccg ctttgctgtt cacaaagccg cgcgcttctt tattggagga
     4561 tgccaaaccg gtttttacca agacttcgac gacattgatg ccgtctgaaa cttcaaatgc
     4621 aggcagaccg tcgagggcga gctgctcgaa gtcgctttcg gtcaggctgc tttggtcttc
     4681 ggcaaacagg ctttcggaaa tgcgttgcgc ggcggcaagg gcttcttcgc cgtgaatcag
     4741 gcgggtcatt tcttcggcga ggatgcgttg cgcttcgggc ttgctgccgc ttgccttgtc
     4801 tttggcttcg atggcatcga tttcttcgat ggacaggaag gtaaagtatt tcaggaattt
     4861 atacacatcg gcatcggcga ctttcagcca gaattggtag aactgatagg gcgaggtttt
     4921 tttcgcgttc agccataccg cgccgccttc ggttttgccg aatttggtac cgtctgattt
     4981 ggttaccaaa ggcagggtca gaccgaatac ttgtttttgg tgcaggcggc gggtcaggtc
     5041 gataccggcg gtgatattgc cccattggtc ggagccgccg atttccaaaa ccgcgccgtg
     5101 gcgtttgttc aactcggcga agtcgtaacc ttgcagcagg gaataggcga actcggtgaa
     5161 ggaaatgcct gcgccgtcgc ggtcgatgcg ctgtttgacg gattctttgt tcagcatggc
     5221 gttgacggag aaatgcttgc cgatgtcgcg caggaagtca aggcagttca tgctgccgaa
     5281 ccagtcggca ttgttcgcca taatggcggc atttccgcct tcaaagctca agaaaggggt
     5341 taattggttg cggatacttt ccacccagcc ggcaacagtt tcggcggaat tcaagctgcg
     5401 ttcggcggct ttgaagctgg ggtcgccgat cataccggtc gcgccgccca ccaaagcaat
     5461 cggcgtatgc cccgcctgtt ggaagcggcg caatgccaat acgggcagca ggtgtccgat
     5521 gtgcaggctg tcggcggtcg ggtcgaagcc gcaataaagg gcaatttttt gttcgttcaa
     5581 caaagcgtct aaggcttcga tgtcggtggt ttgcgcgata aggccgcgcg attgcaggtc
     5641 ttggatgacg ctcatcggtc tctttcaaaa aaaattagcg tttttgcaaa ccgccgattg
     5701 taacaaattt aagcgaatca atggttatgg cgcgtatcga gaaaccgttg tttttcggaa
     5761 aaacgctttg ccaattccgt gccgccgtaa gggttgatgt ggtctttgtc cgagtaaacc
     5821 ggcaatccgc cgatttgaaa atctgcgggg atataggcgg cggcatcaat aatatagacg
     5881 ttggggtatt tggctgccaa ttccctgatg cgtgcattgg ctttcagggt gctttcgtcg
     5941 tccgggcgca gggcttggcg gtaacccggt atgcgtgaag acaagatata ggcgcgctgg
     6001 acgttgtaag acgaggcaag gttgtccgcc atcaggtaaa cggcttgttt ttcggacgag
     6061 agtttatgca gcatacggtc gaatttttgg aaaaaaccgg catcataggc aagggagcgg
     6121 ctgttttcgg gcatttggct gccccagcgc atcgccaaaa ccacttttga ataccggggc
     6181 aggtgttctt cggcatagcg ataaacggcg cggcaggctg cccagttttg gaacacacgg
     6241 gacgcgtagc cttccacata ggcgcaagcg tcggcggaaa ccatagtggc ggaccatttt
     6301 tcttttttgc ccacggcatc gaagaatgtt ttgtaatggt cggcgtggga gtcgcccaaa
     6361 accagcagtt ccggctgttt ttccgtatcc ccccataggc attgtttgcc ggtattgttg
     6421 tggcaggagg tgttggaacg cgtcagcccc aagcggtcgt attgcgccat aaacggcagt
     6481 ctcatcgcaa aaaacgagcc cgcccccaaa atgagcatag gcaaggcata aatccataaa
     6541 acggattgtg cgaacgaacc ttgccatttt ttaaacggtt tttcgatgca gtggtaagaa
     6601 aacagggaaa gcagcaatat caggacgacc gccgccgccg gcgaataagg cggcaggttg
     6661 tccgggccga tatagcgcat aaaggccaat atcggccaat gccacagata aagcgaatag
     6721 gaaatcaaac cggcggcaac agtgattttc gattggaaaa attttttaag cgggtgttcg
     6781 taatgattga aataaatcag cgcggcaaca gccagacagg gaatcaaagc ggcggggccc
     6841 gggaaatagg cggtttgttc cgaataggaa aacaggcagg ttgacaatat gcacacggca
     6901 aacaatgcgc cgacggcggc acagcgtctg ccgacggcag gttgccggca gcgcatccac
     6961 acggcggtca gcgatcctat cagtaattcg caggcgcgca ggtggggcag gtaatattta
     7021 tcgagcgcgg aaggtataaa ggaggcggca aggcttaagg cacacagtgc ggcaaggaag
     7081 ccgaactgta cgcgcaggct tttgcgggcg acaagcagca gcagtatcgg aaagacaaag
     7141 taaaattgtt cttcgaccga caaagaccag atgtgcagca ggggcttttc ttcctgcgcg
     7201 ggatcgaaat aatccttccc ccttgcaaaa tacaggttag aggcgaaacc caaggcggtc
     7261 agcgcggatt tccacaaaag aaagaaatca tctttggtga ataaaaagaa gccgcctgcc
     7321 agcgttgccg ccaatacggc gaaaaatgcg ggcagaatcc gcttgatgcg gcggatataa
     7381 aatgccttca gggaaaacct cccccccccc gacatttcgc ggtgaagaat cgtcgtcatc
     7441 aaaaagcctg aaatcacaaa gaatatatcg acaccgagaa acccgcccgg cagccaatcc
     7501 ttttcgatat ggaacacgat gacggacaag acggcggcgg cgcgcaatgt gtcgatgtcc
     7561 gggcggtagg gtaaggcttg gctcataatg tttttatagt ggattaaatt taaaccagta
     7621 cggcgttgcc tcgccttgcc gtactatctg tactgtctgc ggtttcgtcg ccttgtcctg
     7681 atttaaagtt aatccactat actcgaaacg cggcggcgca aatgccgtct gaaaggtcat
     7741 tttgtacggg atattcggaa tgccggacgg atttttgcaa cagcggggca ggcggtttgt
     7801 tttgcaggaa tcggggaggg caaatcggaa atgcggacgg gattttattt tgatgcagcc
     7861 gcattccggc ggtatggaaa cgccgaaaac caccaaaacc ggcttcagac ggcatttctg
     7921 gcaaagccgt ctgaaaacct gccgcatttg ggttacacgt taaacaaaaa gtgcatcaca
     7981 tccccatcct gcacgacgta ttccttacct tccacacgca ttttgccggc ttctttggct
     8041 ttggcttcgc cgccgagcga gacaaagtcg tcgtaagaaa tgacttgggc gcggatgaag
     8101 ccgcgttcga agtcggtgtg aatcacgccg gcggcttgtg gggctgtgtc gcctttgtgt
     8161 atcgtccacg cgcggacttc tttgacgccg gcagtgaagt aggtttgcag ccccaaaagg
     8221 tcgtaaccgg cgcggatcag gcggttcagg cccggttctt ccaagcccat ttcggcgagg
     8281 aactcggctt tttcaccgtc ttccaactcg gcgatttcgc tctccatcgc ggcgcacacg
     8341 gcgacgacgg gggcgttttc ttttgccgcc aattctttca ggcggtcgag gtgcgggttg
     8401 ttttcaaaac cgtcttcgga aacgttgccg acgtacatgg caggtttggc ggtcagcagg
     8461 aacagcggtt tgagcatcgc gcgttcttcc gcgtccaaac cgaaggaacg cacgggtttg
     8521 ccttcgtcca gatgcggcag cagttttttg cacaaatcga ccagcttttg cgcgtctttg
     8581 tcaccggaac gggcgcgttt ttcttcgcgg acgatggctt tttccacact tgccaagtcg
     8641 gcaagcgcca actctgtacc gatggtttcg atgtcggcaa tcggatcgac tttgccggaa
     8701 acgtggacga tgttgtcgtc gtcaaagcag cgcacgacat tcacaatcgc atcggtttcg
     8761 cggatgttgg caaggaactg gttgcccaag ccctcgcctt tgctcgcgcc tgcaaccaaa
     8821 ccggcaatat cgacaaattc gacgatggca ggctgcattt tttgcggatt gacgattttt
     8881 gccaattcgg ccatacgcgg atcggggact tcgacgatgc cgacgttggg ttcgatggta
     8941 cagaaaggat agtttgccgc ttcgataccc gattgggtca gcgcgttaaa aagggtggat
     9001 ttgccgacgt tgggcaaacc gacgatgccg catttcaaac tcatgttttt tcctgaaaat
     9061 agagaaattt aacggcggat tatagcatac cgccgcccgc gttccgaaaa atgccgtctg
     9121 aaacggcttc agacagcatc cggtttcaaa aaccgttcag aacaagccgt gaatcacgcc
     9181 gtgttcgtcc acatcgattt tctcggcggc cggaactttc ggcagacccg gcatcttcat
     9241 catattgccg cacagcgcga cgatgaagcc cgcgccggcg gaaacggtga tgccgcgcac
     9301 ggcgatgcgg aagccttcgg ggcagcccaa cagtttggcg ttgtcactca aagagtattg
     9361 ggttttcgcc atgcagatcg gcattttgtc caagcccagt ttttccagtg aagcgatttc
     9421 ggcagacgct tccgcgctga aatcaacatc ttccgcgccg tacacttttt gggcaatcgc
     9481 acggattttg tctttgatgc ccaactcgac atcgtaggcg aaaccgaagt tattggtttg
     9541 actttcaatg gcgttgacga ctttgcgcgc caaatccgcg ccgcccgcac cacctttgcc
     9601 ccacacttcg gtcagggaaa cttcaacgcc gtgttcggca caggcttttt caatcatcgc
     9661 caactcggca tcggagtcgg acacgaagcg gttgagcgca acgacgacgg gcagtccgaa
     9721 tacgtttttc aggttggaaa tgtgtttcag caggttgggc aaaccttttt ccaaagcgtc
     9781 taaattttct tcgccgaggt tggcgcgttc cacgccgccg ttatatttca acgcgcggac
     9841 agtcgccacg acaacagccg catcaggttt caaaccggca aggcggcatt tgatgtcgca
     9901 gaatttttcc gcgcccaagt ccgcgccgaa gcctgcttcg gttacggcgt aatcggcaag
     9961 gtgtttcgcc agacgggttg cggttacgga gttgcagccg tgggcgatgt tggcgaacgg
    10021 gccgccgtgt acgaaggcgg gcgtgccttc gatggtttgc accaagttgg gcttaatcgc
    10081 atctttaagc aatgccgcca tcgcgccatt cgctttcaaa tctttggcgt aaacggggct
    10141 gccgtctttg gcgtaggcga caaggatgtt gcccaaacgc tctttcaaat cgctgatgtc
    10201 tttggcaaga cagaataccg ccatcacttc ggaagcaacg gtaatatcga aaccgtcagg
    10261 acgcatcacg ccgtcaacag gcttgcccat gccgtcgatg atgttgcgca actggcggtc
    10321 gttcatatcg accacgcgcc gccacagcac gcgtttgggg tcgatgttca actcgttgcc
    10381 ttggtagata tggttgtcga gcatcgcggc aagcagatta tttgccgcac cgatggcgtg
    10441 aaaatctccg gtgaagtgca ggttgatgtc ttccatcggc aaaacttggg catagccgcc
    10501 gcctgccgcg ccgcctttca cgccgaacac cggccctaaa gaaggttcgc gcagggcaat
    10561 cacggcatct ttgccgatgt ggcgcaacgc gtccgccaaa ccgatggtta cggtggtttt
    10621 gccttcgccg gcaggagtcg ggttgatggc ggttaccaaa atcagcctgc cttgtttttg
    10681 cggcagttta aacgcttcgg caggattgat tttggctttg taatgaccgt aaggctcaat
    10741 gttgtcggcg ttcaggccca gcttggcggc aatttcgcca atcgggcgca tggtggaaga
    10801 ctgggcgatt tcggcatcgg ttttgaagct catgattttc ctttagaaat gaggagggac
    10861 ataccgtctg aaagcatcag gcgacaaaca ggtggattga aaataatatc aggcatatta
    10921 taacgttatc cgcaccaaac ccgcagtgaa atttttgacg ctgcaacaaa aataccgttc
    10981 atattgttca caatccaagg agaaaacatg ggcagcaacg catggctgtt ttgggcattg
    11041 gcatcggcag gcttcgcctc attgaccgcc gttttcgcca aaatgggctt gcagggtata
    11101 gattcagatt tcgctacctt catccgcacc ttggtcatcc tcgccgcttt ggtactgttt
    11161 ttgacctaca ccggcaaatg gcagggcgtg aacggcttta cggggcacaa ctggacattc
    11221 cttatcctat ccggccttgc taccggcgca tcttggcttg cctacttcaa agccctgcaa
    11281 ctgggtaacg cctcgcaagt cgcccccgtc gataaattca gcctggttct ggtcgcgctg
    11341 atggcggtgg ttttcttgga cgaacgcccg aacacgcagg aatggatagg cttggggctg
    11401 gtaacggcgg gcgtgttggt gctggcgttg aaacgttaaa ccgaatccgc cataccgcct
    11461 gaaaccgggt tttgacaatc tgacgggcgg cggtctgaac aaagttaccc aataaaatcc
    11521 gacaccgcgc cgacggcaaa ccgccgcgct tcagatggca tttgttggac ggaaagcccc
    11581 gaacgcccta ttttcacgcc tccacgaaaa tatgccggac atccggtcgg aaccgttcgg
    11641 cagccggctc ggcaagccac cgttttattt cacttccaag cccctgcaag ggcttgagcc
    11701 tctttcagac ggcataccgt gccgacatcc agccacaagc ccgtatgctt ctgaccgctc
    11761 acgcggtttt gccgcatttc gttccgcaat acgggcgcga gtttcgccac actgcccgct
    11821 tcgattccgt caaacatttc aggacggtaa atacccacgc cgctaaatgt caatccgttg
    11881 ccgccattta cttccggccg cacgctgccg tcgggcagca gggaaaaatc gccgtcagga
    11941 tggtgcgggg gattttccac cagccacaga tgggcggaaa tgtgctcggg cagggacgat
    12001 gccgcctgaa acgcggcggt aaaatcgatg tcggtcaaca cgtcgccgtt gaccaccaaa
    12061 aacggggcat cgcccaacag cggcaatgcc cgtgcgatac cgcctgcggt ttccaagccg
    12121 ccttcaggtt cgggcgaata ggcgatgttc acgccataag ccgagccgtc gcccaaagcc
    12181 tcttctatct gccgacccag ccaagcgtgg ttgatgacga tttcggtaaa ccctgcctgc
    12241 ttcagacggc ataggtgcca accgattaga ggcttacccg ccacatcgag cagcggcttc
    12301 ggagtggtat cggtcaaagg gcgcatacgc tcgccgcgtc ctgccgccag tatcatcgct
    12361 ttcatatata tctgtccgaa tatcagtcta aagatctaaa ctgccgtctg aaataaagca
    12421 gcgcgggacg tttgcccacg caatttttaa tttcgtcgag cctgacgtaa aacacaaaat
    12481 gtgtgccgat ttcatgttgg ccgacaatat gcccgtgcag atgcgccaac gcgccttcta
    12541 tttcaggttg tccggtttta ccgtaatgcc aaatatgata ggcaaaacgt tcttcgggtg
    12601 aaagattggt caatccggca aaatgttcgg ccacatcctg atgttcgtct gccaacgtat
    12661 tgatgcacag gctgccgttt tccgacagga tcggaatgat tcgcgcactc cggttgatgc
    12721 acagcatcac ggtcggcggc tcgtcggtaa ccggcgcgac cgccgtcatt gtaatgccgt
    12781 aacgccctgc cgcaccgtct gtcgtgatga catgaacgcc tgccgcgcaa gatgccatcg
    12841 catcacggaa cgaagtttga aaagttttct gcaaatccgc catttttccc ctttaaactg
    12901 tcccctatat aagaatgctg cacacaaggc accccccatg tgcagcagtt ctgattcaaa
    12961 aagccgtcgg tcggacattt ccgcgcgtta cggcgtatta cgagttcaac gcatcctcga
    13021 ttttggcaag ttctgccaac aggtctttaa gcagcagcat tttctcgcgg cccagcactt
    13081 cctcgatagc gtcgtaacgc tcgtccactt cttcgccgat ttcctcatac agcttctcgc
    13141 cctcggcagt cagcttcaga aaaacacgtc gttggtcgtt ggaaggtttc aggcggacaa
    13201 ccaaacccgc tttttcaagg cgggtcagga taccggtcag gctggggcgc aaaatgcacg
    13261 cctgattcgc caaatcttga aagtccagcg tgccgttttc cgccaaaaga cggataatcc
    13321 gccattgctg atcggtaata ttcgcctgat tcagaatagg cctgaattgg gtcatcaggg
    13381 cttcccttgc ctgtatcaga ctgatattga tagacgcatg ttttgattgg gtaggcattg
    13441 ttcaagtctc caagttatcg aaaatcaaac tttcaaaccg tcgggaaagc ctgtgggcgt
    13501 aatttttgat gcaaccgtta tataacaaaa cgaacatata gcaacaatac gctataaacc
    13561 gcatcggacg actgggtata aaagacttta attccgataa tcctatctaa aaatatttta
    13621 atagttatat cttagtctat tttccctaca atctcaacaa agtattacat ttactgtcga
    13681 aagaactttc ttccagaaaa aacaaaagcc gccgcatcag acgagcaagg tatatgccgt
    13741 ttgattctct acatagcgta aagtttaaca aaaacaaaag ttaaccgaaa acatccgcct
    13801 gaaaaattcg tgcgcgcaag ccccaataac tgctgattcc cgtcgtatag tgaaccattt
    13861 tcccattttt gaccaaaacg acggcaggcg ttgcgacaat ccgccaagac cttgccaaac
    13921 ccccgtcctc atcgttgacc gtcggaaagc ccaagccccg ctttgccata tacgccgcca
    13981 cttcggacgc gctgccggaa cgtaccgcca cgccgacgac cggaacgccg tccgccgcca
    14041 aatcatcgat tatcggcgac tgataacggc acacgccgca ccagcttccc caaaaataca
    14101 ccaaaatcgc cttatcccgg ctaaactgtc ccaaagtcag ccgctgcccc gacagcaggg
    14161 tcaaaggccg ccctgccgca ccggccggct cttcgggctt gcgtatccaa tccaaaaaca
    14221 gcgacaccaa taaaaacacc aatgccgtct gaacggcaaa tttgatgccc gaaagcagtt
    14281 tctttttcat acgctctctc aaacggtacg cccgcgcaac cggcaggcaa acaaaaagcc
    14341 aagtctcaaa acttggcttc cggttatctg gtgggtcgtg agcgattcga acgctcgacc
    14401 aacggattaa aagtccgctg ctctaccggc tgagctaacg acccgataag ccgtgcatta
    14461 tacagcacca tcctacctcg tcaagcaaat tttacaggct taattgcaga ccactgtttg
    14521 cacgggatat tttgacaacg gattttcaca atccgccgca taccgtgtaa aagttcgcac
    14581 aaggaaaagc aaaccgcccg aaatcaatgt acactttccg cccgtttccc aaactgcaca
    14641 cagaaacaca cattatgaac atacaaaaca tccgcaccct cctcgacacc gtcgccgttc
    14701 cgaatacggc acgcacgctc ggcggcgaaa aggccgtccg ttcggtcgaa cagcgttcag
    14761 acggcatcca tatcgccctg catttcggct tccccgtcgc gcacattgcc tcagaaacag
    14821 ccgaccgcat acaggaaatc ctgatgccgc tgacaggcga cacacacatc catctgtcca
    14881 tggacactga aatcggcaca cacaaagtcc agcccggcgt taccactatt aaaggcgtga
    14941 aaaacatcat cgccgtcgcc tctggcaaag gcggcgtggg caaatcaacc accaccgcca
    15001 accttgccgc cgcaatggcg cgcatgggcg cgcgcgtcgg cgtactcgat gccgaccttt
    15061 acggcccgag ccagcccacg atgctgggtg tggacgaccg caaacccgat cagaaaaacc
    15121 aaaaactcat tcccgtcgaa tcttcagacg gcatacaggt catgtctatc ggctttctcg
    15181 tcgataccga ccaagccgtc gtctggcgcg ggccgatggt cagccaagcc ttgcagcaac
    15241 tgatgtttca aagcgagtgg gacgaagtgg attatctttt catcgacctg ccccccggta
    15301 ccggcgacat ccagctcacg ctgtcccaac gcatccccgt taccgggtcc gtcatcgtaa
    15361 ccacgccgca ggacatcgcg ctgatagacg cgcgcaaggc tgtggatatg ttccgcaagg
    15421 tcaacattcc cattttaggc gtattggaaa atatgtccgt ccacatctgc accaactgcg
    15481 gacacagcga agccctgttc ggcacggacg gcggcaaaga tttagccgca cgcctcaacg
    15541 tccccctgct cggacagctt cccctaagcc tgcccgtgcg cgaagcaatg gacggcggca
    15601 caccggcgca actgttcgac gaacaccccg ccatcgcccg aatctacacc gatgccgcat
    15661 tccaaatcgc cctgggcatt gccgacaaag gcaaagactt cagcagccgg ttccctaaaa
    15721 ttgtcgtcga ataaagccgc gtccgaaacc gcaacagcaa tgccgtccca agccccgcgc
    15781 ctgccggcgg gcttcatagt cctctctccc cgtgggagag ggctggagag agggcaacaa
    15841 gccgcaaggc ttgtattggg gcggttaagc tgttgggaaa gattgccgca acttggagaa
    15901 tgccctctcc ccggccctcc cccacagggg agggagcgga ttgcggcagg ttttgcggtt
    15961 gcaggcggtt tgaaaaacag attggattta caaccgttga tgcaggtcgt ctgaaaagca
    16021 aaaagcagcc tgcacaacct gattagttta caaaaccctt aaccccaaca gcctccccgt
    16081 cctctctccc cgtgggagag ggctggagag agggcaacaa gccgaaaggc ttgtattggg
    16141 gcggttgagt tgttgggaaa ggttgccgca acttggaaaa tgccgcctcc ccggccctcc
    16201 cccacggggg agggagtggg tttcggcaga tttttcggtt gcaggcgatt tgaaaggcaa
    16261 cttagatttg cagctgttgt ttcagg
//
LOCUS       DBBZYD010000045        16144 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.045, whole genome shotgun sequence.
ACCESSION   DBBZYD010000045 DBBZYD010000000
VERSION     DBBZYD010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.045"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            6..81
                     /locus_tag="ACJJDL_001172"
     tRNA            6..81
                     /locus_tag="ACJJDL_001172"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="ACJJDL_001173"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="ACJJDL_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HGG7573895.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="ACJJDL_001174"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="ACJJDL_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HGG7573896.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="ACJJDL_001175"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="ACJJDL_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HGG7573897.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="ACJJDL_001176"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="ACJJDL_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HGG7573898.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKTTRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2472..2972
                     /gene="rplJ"
                     /locus_tag="ACJJDL_001177"
     CDS             2472..2972
                     /gene="rplJ"
                     /locus_tag="ACJJDL_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HGG7573899.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3030..3401
                     /gene="rplL"
                     /locus_tag="ACJJDL_001178"
     CDS             3030..3401
                     /gene="rplL"
                     /locus_tag="ACJJDL_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HGG7573900.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3592..7770
                     /gene="rpoB"
                     /locus_tag="ACJJDL_001179"
     CDS             3592..7770
                     /gene="rpoB"
                     /locus_tag="ACJJDL_001179"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HGG7573901.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNKLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            7927..12102
                     /gene="rpoC"
                     /locus_tag="ACJJDL_001180"
     CDS             7927..12102
                     /gene="rpoC"
                     /locus_tag="ACJJDL_001180"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HGG7573902.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVNQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGAAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12394..12651
                     /locus_tag="ACJJDL_001181"
     CDS             12394..12651
                     /locus_tag="ACJJDL_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573903.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGNRMGMPINIG"
     gene            12648..12797
                     /locus_tag="ACJJDL_001182"
     CDS             12648..12797
                     /locus_tag="ACJJDL_001182"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7573904.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            12976..13347
                     /gene="rpsL"
                     /locus_tag="ACJJDL_001183"
     CDS             12976..13347
                     /gene="rpsL"
                     /locus_tag="ACJJDL_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HGG7573905.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            13465..13935
                     /gene="rpsG"
                     /locus_tag="ACJJDL_001184"
     CDS             13465..13935
                     /gene="rpsG"
                     /locus_tag="ACJJDL_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HGG7573906.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            13954..16059
                     /gene="fusA"
                     /locus_tag="ACJJDL_001185"
     CDS             13954..16059
                     /gene="fusA"
                     /locus_tag="ACJJDL_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HGG7573907.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4297 a         3580 c         4176 g         4091 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgtcggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaacgttaa agtggatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggaagggtt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgctgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcgc attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ctagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 cccccgtgtt tccggtttta ttggagggag ggctaataga cctacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaaggg ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgaa aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagttcgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggt aaagccaatc catctcctcc ggttggtcct gctttgggtc
     1201 agcgcggttt gaatattatg gaattttgta aggcatttaa tgctgcaacc caaggtatgg
     1261 agcctggctt accgattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac cccgccagct tctatcttgt tgaaaaaggc tgccggtttg caaaaaggta
     1381 gttctaatcc tctgaccaac aaagtgggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agatcctgat ttgactgctg ctgacttgga tgcggctgtc cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggatg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagctcttc gctcttctgt ggaagccaat aaattatatg caattgatga
     1621 agcaattgct ttggtaaaaa aagcagcgac tgctaaattt gacgagtctg ttgacgtatc
     1681 tttcaacttg ggcgttgatc cgcgtaaatc tgaccaagtt atccgtggtt cggtcgttct
     1741 gcctaaaggc accggtaaga caacccgtgt ggctgtattt actcaaggtg caaatgcaga
     1801 agctgctaaa gaagctggtg cagatatcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg acgttgttat tgcttctccc gatgcaatgc gtattgttgg
     1921 tcaattgggt accatcttgg gccctcgtgg tctgatgcca aaccctaaag taggtacggt
     1981 tacccctaat gttgccgaag cagtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggatgc tatcgttaaa gccaagcctg ctgccgctaa
     2161 aggtcagtat ctgaaaaaag ttgctgtgtc tagcaccatg ggtttgggta ttcgcgttga
     2221 tacatcaagc gtaaataact aatcttaagg aattttcaag cagtttggtt ttctgggctg
     2281 cttgaatttg ggctacttaa aattaagtag atgtccaaga ccgtagggat cgtaagattt
     2341 aatcgtaact gccctacgca gacggtagtc ctgaaacaca ttgcaagatt gcttgtaaga
     2401 tgtcttttta ggttaccgcg ctggtgggat atcgttttgg tatcctgttt ataaacagtg
     2461 ggaggtagac cttgagtctc aatattgaaa ccaagaaagt ggcggtcgag gaaattagcg
     2521 cggcaattgc taatgctcaa accctcgtag tcgctgaata tcgcggtatc agtgtttcca
     2581 gtatgactga gcttcgtgcg aatgcacgta aagaaggcgt ttatttgcgc gttctgaaaa
     2641 atactttggc tcgtcgtgca gtgcaaggta cttcatttgc agaattggcc gatcaaatgg
     2701 ttggtccgtt ggtttacgct gcttctgaag atgctgttgc tgctgctaaa gtgttgcacc
     2761 aattcgcgaa aaaagatgac aaaattgtcg ttaaagccgg ttcttacaat ggcgaagtaa
     2821 tgaatgctgc tcaggttgct gagttggctt ctattccgag ccgcgaagag ctgttgtcca
     2881 aactgttgtt cgttatgcaa gctcctgtat cgggctttgc gcgcggtttg gctgctttgg
     2941 cagagaaaaa agccggcgaa gaagccgctt aatcgatttt gtttctgtta atcaattatt
     3001 ttttaataca atatttggag taaaatagca tggctattac taaagaagac attttggaag
     3061 cagttggttc tttgaccgta atggaattga acgacttggt taaagctttt gaagaaaaat
     3121 tcggtgtttc tgctgctgct gttgcagttg caggtcctgc tggtgccggt gctgccgatg
     3181 ctgaagaaaa aaccgaattt gatgtcgttt tggcttctgc cggcgatcaa aaagtcggcg
     3241 tgattaaagt tgtccgtgca attaccggtt tgggtctgaa agaagctaaa gacatcgttg
     3301 acggtgcacc taaaaccatt aaagagggtg tttctaaagc tgaagccgaa gacatccaaa
     3361 aacaactgga agaagccggc gctaaagtcg aaatcaaata atttgatgct tcttatgaag
     3421 gctggcagtt ttctgccagc cttattttgc ttcttaaaat aagcattaag tattgtttac
     3481 atttatttgc atagttttta tcaaatcatt gcaaataaat gtaaacatca gattgatgcg
     3541 tgccgttgct ttcagacggc ctattattga aaattacttt tcggagtgta tatgagctat
     3601 tcgtttaccg agaaaaaacg tatccgtaag agttttgcaa agcgggaaaa tgttttggaa
     3661 gttcctttcc tgctggcaac ccaaattgat tcttatgcga agtttttgca gctggaaaat
     3721 gcttttgaca aacgtaccga tgacggtctg caggcggcat ttaattctat tttcccgatt
     3781 gtgagccata acggttatgc gcgattggag tttgtgcatt acacattggg cgagcctttg
     3841 ttcgatattc ccgaatgtca gttgcgcgga atcacttatg cagccccctt gcgcgcgcgt
     3901 atccgtttgg tgattttgga taaggaagca tctaaaccga cggtaaaaga agttcgtgaa
     3961 aacgaagtgt atatgggcga aattccgttg atgaccccga gcggttcttt tgtgattaac
     4021 ggcacagagc gtgtgattgt ctcccagttg caccgttcgc ccggtgtatt cttcgagcat
     4081 gacaaaggta agacgcactc ttccggcaaa ttgttattct ccgcccgcat cattccctac
     4141 cgtggttcat ggttggattt tgaatttgat ccgaaagatt tgctgtattt ccgtatcgac
     4201 cgccgccgta aaatgccggt aacgattttg ttgaaggctt tgggctacaa caatgagcaa
     4261 atcttggata ttttctacga caaagaaacg ttctatttgt cttcaaacgg tgttcaaacc
     4321 gatttggtcg cagaccgtct gaaaggcgaa actgccaagg tcgatatctt ggataaagaa
     4381 ggcaatgtat tggttgccaa aggtaagcgc attactgcga aaaatatccg tgatattacc
     4441 aatgcaggcc tgacccgttt ggatgtagaa ccggaaagcc tgctgggcaa agcattggct
     4501 gccgatctga ttgattcgga aaccggcgag gtattggctt ctgccaatga tgaaattaca
     4561 gaagagttgt tggccaaatt tgatatcaac ggcgtaaaag aaattacgac cctttatatc
     4621 aatgagctgg atcagggtgc ttatatctcc aataccttgc gtacggatga gactgccggc
     4681 cggcaggcgg ctcgtgttgc gatttaccgt atgatgcgtc cgggcgaacc gcccaccgaa
     4741 gaggcggtcg agcaattgtt taaccgcttg ttcttcagtg aagacagcta cgatctgtcc
     4801 cgcgtaggcc gtatgaaatt taatacgcgc acatacgaac aaaaactgtc cgaagcccaa
     4861 caaaactctt ggtacggccg cctgctgaac gaaacgtttg ccggtgctgc cgacaaaggc
     4921 ggttatgtcc tgagcgtcga agatattgtc gcctcgattg cgactttggt cgagttgcgt
     4981 aacggccatg gcgaagtgga cgatatcgat cacttgggca accgccgagt acgttcggta
     5041 ggcgagctga ctgaaaacca attccgtagc ggtttggccc gtgtggaacg tgccgtaaaa
     5101 gaacgtttga atcaggcgga atcagaaaac ttgatgccgc acgatttgat taatgcaaaa
     5161 cctgtttctg ccgctattaa agaattcttc ggctccagcc aattgagtca gtttatggat
     5221 cagaccaacc ccttgtctga agtaacccat aaacgccgtg tatctgcatt gggtccgggc
     5281 ggtttgaccc gcgaacgtgc aggatttgag gtgcgggacg tgcatccgac ccactacggt
     5341 cgcgtatgtc cgattgaaac gcctgaaggt ccgaacatcg gtttgatcaa ctcattgtcc
     5401 gtttatgcgc gcaccaatga ttacggtttc ttggaaacgc cttaccgccg cgttatcgac
     5461 ggcaaagtaa ctgaagaaat cgactacttg tctgccatcg aagaaggccg ctatgtgatt
     5521 gcacaggcga atgccgattt ggacaaagac ggcaatctga ttggcgactt ggttacttgt
     5581 cgtgaaaaag gcgaaaccat tatggcaacg cctgaccgcg ttcaatatat ggacgtggca
     5641 accggtcaag tggtatccgt tgcagcatcc ctgattccgt tcttggaaca cgatgacgcg
     5701 aaccgcgcat tgatgggtgc gaatatgcaa cgtcaggcag tgccttgctt gcgtcctgaa
     5761 aaaccgatgg tcggtaccgg tatcgagcgt tccgttgccg ttgactctgc tactgcaatc
     5821 gttgcccgcc gaggcggcgt ggtcgagtat gtcgatgcca accgtgttgt gattcgtgtc
     5881 catgacgacg aagcgactgc cggcgaagtg ggtgtcgata tttacaactt ggttaaattt
     5941 acccgttcca accagtctac caatatcaat cagcgtcctg ccgtcaaagc cggcgatgtt
     6001 ttgcaacgcg gcgatttggt ggccgatggc gcgtccaccg atttgggcga attggctttg
     6061 ggtcaaaata tgaccatcgc cttcatgccg tggaacggtt acaactacga agactcgatt
     6121 ctgatttccg aaaaagtggc tgcggacgac cgctatactt cgattcacat tgaggaattg
     6181 aatgtcgttg cccgcgatac caagctgggt gcggaagaca ttacccgcga tattccgaac
     6241 ttgtccgagc gtatgcaaaa ccgtttggac gaatccggta tcgtttacat cggtgcggaa
     6301 gtagaagccg gcgatgtgtt ggtaggcaag gtaacgccta aaggcgaaac ccagctgacg
     6361 ccggaagaaa aactgctgcg cgccatcttc ggtgaaaaag catctgacgt aaaagatact
     6421 tcattgcgta tgcctaccgg catgagcggt accgttatcg acgttcaagt cttcactcgt
     6481 gaaggtattc aacgcgacaa acgtgctcaa tccattatcg attccgagtt gaaacgctac
     6541 cgtttggatt tgaacgacca attgcgtatt ttcgacaacg acgcattcga ccgtatcgag
     6601 cgtatgattg tcggtcagaa agccaacggc ggcccgatga agctggccaa aggcagtgaa
     6661 atcacgaccg aatatctggc gggtctgccg agcaggcacg attggttcga tatccgtctg
     6721 accgatgaag atttggccaa gcagttggaa ctgattaaag tgagcctgca acaaaaacgc
     6781 gaagaagcgg acgagttata cgaaatcaag aagaaaaaac tgacccaagg cgacgaattg
     6841 caacccggcg tacaaaaaat ggtgaaagtt tttatcgcca tcaaacgccg tctgcaagcc
     6901 ggcgacaaaa tggcgggccg ccacggtaac aaaggcgtgg tatcgcgcat tctgccagtg
     6961 gaagacatgc cttacatggc ggacggccgt ccggtagaca tcgtactgaa cccattgggc
     7021 gtaccttccc gtatgaacat cggtcagatt ttggaagttc acttgggttg ggcagcaaaa
     7081 ggtatcggcg agcgtatcga ccgtatgctg aaagagcaac gcaaagcagg cgagttgcgc
     7141 gagttcttga acaaactcta caacggcagc ggcaagaaag aagatttgga tgccctgact
     7201 gatgaagaaa tcatcgaact ggcctccaac ctgcgcaaag gtgcatcttt cgcctctcct
     7261 gtattcgacg gtgcgaaaga gtctgaaatc cgcgaaatgt tgaacttggc ttatccgagc
     7321 gacgatcctg aggttgaaaa actgggcttc aacgacagta aaacccaaat cacgctgtat
     7381 gacggccgtt caggcgaagc atttgaccgc aaggttacag taggtgtgat gcactatctg
     7441 aaactgcacc acttggttga cgaaaaaatg cacgcgcgtt ctaccggtcc gtacagtctg
     7501 gttacccagc agcctttggg cggtaaagcc cagttcggcg gccaacgttt cggtgagatg
     7561 gaggtttggg cactggaagc atacggcgca gcctacacgc tgcaagagat gctgactgtg
     7621 aagtctgacg acgtgaacgg ccgtaccaaa atgtacgaaa acatcgtcaa aggcgaacac
     7681 aaaatcgatg ccggtatgcc cgagtccttc aacgtattgg tcaaagagat tcgctcactg
     7741 ggcttggata tcgatttgga acgttactaa acaaaagttt tcagacggcc tttcagggtc
     7801 gtctgaaaaa gtggtttcag aataagaatg aagcaatcgg catttaggcc gtctgaaatc
     7861 aaaagtaccg tttccccata tcgaaaatcc gccatgcggt aaaaatactt ccttcaagga
     7921 gcaaaaatga atttgttgaa cttatttaat ccgttgcaaa ctgccggcat ggaagaagag
     7981 tttgatgcca ttaaaatcgg tattgcctct cccgaaacca tccgctcatg gtcttatggc
     8041 gaagttaaaa aacctgaaac catcaactac cgtacgttca aacctgagcg tgacggtttg
     8101 ttctgtgcca aaatctttgg cccggtcaaa gactacgaat gcttgtgcgg aaaatacaaa
     8161 cgcttgaaat ttaaaggtgt aacttgtgaa aaatgcggcg tggaagtaac cctgtccaaa
     8221 gtgcgccgcg aacgcatggg ccatatcgaa ttggctgcgc ccgtcgcaca tatttggttc
     8281 ttaaaatccc tgccttcccg cttgggtatg gtgttagaca tgactttgcg cgatatcgaa
     8341 cgcgtattgt actttgaagc atttgtggta accgatcccg gtatgactcc gctgcaacgc
     8401 cgccaattgc tgactgaaga cgattactac aacaagctgg acgaatacgg cgacgacttc
     8461 gatgccaaaa tgggtgcaga aggtatccgc gaattgctgc gtaccttgaa tgtagcaggc
     8521 gaaatcgaaa tcctgcgcca agagttggaa tcgaccggtt ccgacaccaa aatcaaaaaa
     8581 atcgccaaac gcttgaaagt attggaagct ttccatcgtt ccggtatgaa gctggaatgg
     8641 atgattatgg atgtgctgcc ggtattgccg cctgatttgc gtccgttggt tccattggat
     8701 ggcggtcgtt ttgccacttc cgatttgaac gatttgtacc gtcgcgtcat caaccgtaac
     8761 aaccgtctga aacgtctgtt ggaactgcat gcgcccgaca ttatcgtccg caacgaaaaa
     8821 cgtatgttgc aagaagcagt tgactcgctg ttggataacg gccgtcgcgg taaagccatg
     8881 accggcgcca acaaacgccc gctgaaatca ttggcagaca tgattaaagg taaaggcggt
     8941 cgcttccgtc aaaacctgtt gggcaaacgt gtggactact ccggccgttc cgtgattacc
     9001 gtaggcccat acctgcgtct gcaccaatgc ggtctgccga aaaaaatggc tttggaattg
     9061 ttcaaaccgt tcattttcca caaattggaa aaacaaggtt tggcttctac tgttaaagct
     9121 gcgaaaaaat tggtagaaca agaagtacct gaagtatggg atatcttgga agaagtcatc
     9181 cgcgaacatc cgattatgtt gaaccgtgcg ccaaccctgc accgtttggg tattcaagcg
     9241 ttcgaaccca tcctgattga aggtaaagcc attcagttgc atccgttggt atgtgccgca
     9301 tttaacgccg actttgacgg cgaccaaatg gcggtacacg ttccattgag cttggaagca
     9361 caaatggaag cacgcacgct gatgctggct tcaaacaacg tattgtctcc tgccaacggc
     9421 gaaccgatta tcgtaccttc ccaagacatc gtattgggtc tgtactacat gacccgcgac
     9481 cgtatcaatg ccaaaggcga gggcagcctg tttgccgatg tgaaagaagt gcatcgcgca
     9541 taccatacca aacaggtcga gctgggtacg aaaattaccg tacgtctgcg cgaatgggtg
     9601 aaaaacgaag caggtgagtt tgagcctgtc gttaaccgtt acgaaacaac cgtcggccgt
     9661 gcattgttga gcgaaatcct gccgaaaggc ctgccgtttg aatatgtcaa caaagcgttg
     9721 aagaaaaaag aaatttctaa actgattaac gcatcgttcc gcctgtgcgg cttgcgcgat
     9781 acggttatct ttgctgacca cctgatgtac accggtttcg gatttgcggc aaaaggcggt
     9841 atttccattg ccgttgacga tatggaaatt ccaaaagaaa aagcggcctt gctggctgaa
     9901 gccaatgccg aggttaaaga aatcgaagac caataccgtc aaggtttggt taccaacggc
     9961 gaacgctaca acaaggtggt cgatatttgg ggtcgtgccg gcgataaaat cgctaaagcg
    10021 atgatggaca acctgtccaa acagaaagtt atcgaccgtg acggcaacga agtcaatcaa
    10081 gagtcattca actccatcta tatgatggcg gactccggtg cccgtggttc tgcggctcag
    10141 attaaacagt tgtccggtat gcgcgggttg atggctaaac ctgacggctc gattattgaa
    10201 acgccgatta cctcaaactt ccgcgaaggt ttgaccgtat tgcaatactt tattgcgact
    10261 cacggtgcgc gtaaaggttt ggcggatacc gcgttaaaaa ccgcgaactc cggttacctg
    10321 acccgtcgtc tggtagacgt aactcaagat ttggtcgttg ttgaagacga ttgcggtact
    10381 tcagacggct ttgtcatgaa ggcagtggta caaggcggtg atgtgattga agcattgcgc
    10441 gatcgtattt tgggccgtgt tactgcgtct gacgttgtcg atccgtcaag cggcgagacc
    10501 ttggttgaag ccggtacgtt gttgactgaa aaactggtgg atatgattga ccaatccggt
    10561 gtcgatgaag tcaaagtccg tactccgatt acttgtaaaa cccgccacgg tttgtgcgcg
    10621 cactgttatg gtcgcgactt ggcgcgcggt aagctggtta acgccggtga agcagttggt
    10681 gtgattgctg cacaatccat tggtgaaccg ggtacccagt tgaccatgcg tacgttccac
    10741 attggtggtg cggcatcccg tgcggcagca gccagccaag tggaagccaa atccaacggt
    10801 acggcacgtt tcagcagcca gatgcgttac gttgccaaca acaaaggtga gttggttgtc
    10861 atcggtcgct cttgcgaagt cgtgattcat gatgacatcg gccgtgaacg cgaacgccac
    10921 aaagtacctt acggtgccat cctgctggta caagacggag cggccattaa agccggtcaa
    10981 accttggcaa cctgggatcc gcatacccgt ccgatgatca ccgaacatgc aggtatggtg
    11041 aaatttgaga acgtggaaga gggtgttacc gttgcgaaac aaactgacga tgtaaccggt
    11101 ttgtccactc tggtagtgat tgacggtaaa cgtcgttcct ctagtgcttc taaactgctg
    11161 cgtccgactg taaaattgtt ggatgaaaac ggcgtggaaa tctgtattcc cggtacgtcc
    11221 actccggttt cgatggcatt ccccgttggt gcggtgatta ccgtacgcga aggtcaggaa
    11281 atcggtaaag gcgacgtatt ggcgcgtatc ccgcaagcct cttccaaaac ccgcgacatt
    11341 accggtggtc tgccgcgcgt tgccgaattg tttgaagcac gcgtgccgaa agatgccggt
    11401 atgttggcgg aaattaccgg taccgtttcc ttcggcaaag agaccaaagg caagcaacgt
    11461 ctgattatta ccgacgtgga cggcgtagca tacgagactt tgatttccaa agagaaacag
    11521 attttggtac acgacggtca agtggtaaac cgcggcgaaa ccattgtgga cggcgcggtc
    11581 gatccgcacg atattctgcg tctgcaaggt atcgaagcac tggcacgcta cattgtccaa
    11641 gaggtgcaag aggtttaccg tctgcaaggt gtgaagattt ctgataaaca catcgaagtc
    11701 atcatccgtc aaatgttgcg ccgtgtgaac attgcggatg ccggcgaaac cggcttcatt
    11761 accggagagc aggtcgaacg cggcgatgtg atggcggcca atgaaaaagc tttggaagaa
    11821 ggcaaagaac cggcgcgtta cgaaaacgta ttgctgggta ttaccaaagc ttccctgtct
    11881 accgacagct tcatttctgc tgcatcgttc caagaaacga cccgtgttct gaccgaagcc
    11941 gcgattatgg gcaaacaaga cgaactgcgc ggtttaaaag agaacgtcat cgtcggccgc
    12001 ctgattcctg ccggtaccgg tttgacttat caccgcagcc gtcatcagca atggcaaggg
    12061 gtagagcagg agactgctga aacccaagta acggatgaat aatcttcggc gcgtttattc
    12121 aatacaaaac cgcaagcttt aagcttgcgg tttttctttg tccgattaag gcaaaaacaa
    12181 gcgttttcgt cattttgagg cgtgtggatt attccttagg tattttcggg ccggagacca
    12241 acgaggtggc gggtgtcgtc ggtacgtccg gagaccaaaa taactttgcc agggatgttg
    12301 gtttcggcgg tcaaaaaaag tagcgtctta atgttttcca tttaaacaaa tgtcgtctga
    12361 aacttcagac ggcatttcct ttaaaaaata aatatgaaac ccagaaatct cttttttgca
    12421 ggctgcctgc tgacttcggc gacgtttgcc gaggatatcg gcgtacctgt cgaactgatt
    12481 aacgtcggta atcggattgc gatgccgtct gaaggggaaa gcctcgccct cctgccgttt
    12541 gccgaggatg taccgccggt tcgcgatgca atgccgtctg aagttcctaa aagcgcggca
    12601 ggcggcgatg ttcggggtaa ccggatggga atgccgatta acatcggatg agcgcggctt
    12661 tatggcataa aaaactgtcg tggaaaggat ttacacccca aataaatttc cgttacaaca
    12721 agatcaacag caatatgccc gccttttatt cgcgcagcgg caaggaacgg tttgtcagta
    12781 tagaaaaaac gtattgacag tattttcttc agtcgtccga ctgattgtga gggatgttgg
    12841 taaatattta tcggcaaaca agaaaatcat ctttcttctt gtcgttatgc ttgactgtat
    12901 acttgcaata aaaatataat tccactcttg ccgacatggt gtcggcaagt atttaactca
    12961 acaggacgag aaaatatgcc aactatcaac caattggtac gcaaaggccg tcaaaagccc
    13021 gtgtacgtaa acaaagtgcc cgcactggaa gcctgcccgc aaaaacgcgg cgtgtgcacc
    13081 cgtgtataca cgactacccc taaaaaacct aactctgcat tgcgtaaagt atgtaaagtc
    13141 cgcctgacca acggttttga agtcatttca tacatcggcg gcgaaggcca caacctgcaa
    13201 gagcacagtg tcgtattgat tcgcggcggt cgtgtaaaag acttgccagg tgtgcgttac
    13261 cacactgtac gcggttcttt ggatactgca ggtgttaaag accgtaaaca agcccgttcc
    13321 aaatatggtg ctaagcgtcc taaataatta ctgggactta aataggcacg tcggccgcct
    13381 aagcagaaca acggccgagt aagtgaatac tcaattgggt attcatggga atagacccga
    13441 ctgaatagat taaaggaaat taaaatgcca agacgtagag aagtccccaa gcgcgacgta
    13501 ctgccagatc ctaaattcgg cagcgtcgag ttgaccaaat tcatgaacgt attgatgatt
    13561 gacggtaaaa aatccgttgc cgagcgtatc gtttacggtg cgttggaaca gattgagaaa
    13621 aaaaccggca aagtagcaat cgaagtattt aacgaagcca ttgcaaacgc caaacctatc
    13681 gtggaagtga aaagccgccg tgtaggtggt gcaaactacc aagttcctgt tgaagttcgt
    13741 ccttcacgcc gtttggcttt ggcaatgcgc tgggttcgcg atgcggcccg caaacgtggt
    13801 gagaaatcca tggacctgcg tttggcaggc gaattgattg atgcgtccga aggccgtggc
    13861 ggtgcgttga aaaaacgtga agaagtacac cgtatggctg aagccaacaa agcattctct
    13921 cacttccgtt tctaattttg aaaggctaat aaaatggctc gtaagacccc gatcagcctg
    13981 taccgtaaca tcggtatttc cgcccatatc gatgcgggta aaaccacgac gacagaacgt
    14041 attttgttct ataccggttt gacccacaag ctgggcgaag tgcatgacgg tgcggctact
    14101 accgactaca tggaacaaga gcaagagcgc ggtattacca ttacctccgc tgccgttact
    14161 tcctactggt ccggtatggc gaaacaattc cccgagcacc gcttcaacat catcgacacc
    14221 ccgggacacg ttgactttac cgtagaggta gagcgttcta tgcgtgtatt ggacggcgcg
    14281 gtaatggttt actgcgcggt gggcggtgtt caaccccaat ctgaaaccgt atggcggcaa
    14341 gccaacaaat accaagtgcc gcgcttggcg tttgtcaata aaatggaccg tcagggtgcc
    14401 aacttcttcc gcgttgtcga gcaaatgaaa acccgtttgc gcgcaaaccc tgtacctatc
    14461 gtcattccgg ttggtgcgga agacaacttc agcggtgtgg ttgatttgtt gaaaatgaaa
    14521 tccatcattt ggaatgaagc cgataaaggt acaaccttta cctatggcga tattcctgcc
    14581 gaattggtcg aaactgccga agaatggcgt caaaatatga ttgaagccgc agccgaagcc
    14641 agcgaagaac tgatggacaa atacttaggc ggcgacgagc tgaccgaaga agaaatcgta
    14701 ggcgcgttgc gtcaacgtac tttggcaggc gaaattcagc ctatgctgtg tggttctgca
    14761 tttaaaaaca aaggtgttca acgtatgttg gacgcagttg tagaattgct gccagctcct
    14821 accgatattc ctccggttca aggtgtcaac ccgaataccg aggaagccga cagccgtcaa
    14881 gccagcgatg aagagaaatt ctctgcattg gcgttcaaaa tgttgaacga caaatacgtc
    14941 ggtcagctga cctttatccg cgtttactca ggcgtagtaa aatccggcga taccgtattg
    15001 aactccgtaa aaggcactcg cgaacgtatc ggtcgtttgg tacaaatgac tgccgcagac
    15061 cgtactgaaa tcgaagaagt acgcgccggc gacatcgcag ccgctattgg tctgaaagac
    15121 gttactaccg gtgaaacctt gtgtgcggaa agcgcgccga ttatcttgga acgtatggaa
    15181 ttccccgagc cggtaatcca tattgccgtt gagccgaaaa ccaaagccga ccaagagaaa
    15241 atgggtatcg ccctgaaccg cttggctaaa gaagaccctt ctttccgtgt ccgtacagac
    15301 gaagaatccg gtcaaaccat tatttccggt atgggtgagc tgcacttgga aattattgtt
    15361 gaccgtatga aacgcgaatt cggtgtggaa gcaaatatcg gtgcgcctca agtggcttac
    15421 cgtgaaacta tccgcaaagc cgttaaagcc gaatacaaac atgcaaaaca atccggtggt
    15481 aaaggtcaat acggtcacgt tgtgattgaa atggaaccta tggaaccggg tggtgaaggt
    15541 tacgagttta tcgatgaaat taaaggtggt gtgattcctc gcgaatttat tccgtctgtc
    15601 gataaaggta tccgcgatac gttgcctaac ggtatcgttg ccggctatcc tgtagttgac
    15661 gtacgtatcc gtctggtatt cggttcttac catgatgtcg actcttccca attggcattt
    15721 gaattggctg cttctcaagc gtttaaagaa ggtatgcgtc aagcatctcc cgccctgctt
    15781 gagccgatta tggcagttga agtggaaacc ccggaagaat acatgggcga cgtaatgggc
    15841 gacttgaacc gccgtcgcgg tgttgtattg ggtatggatg atgacggtat cggcggtaaa
    15901 aaagtccgtg ccgaagtacc tctggcagaa atgttcggtt actcgaccga cctgcgttct
    15961 gcaacccaag gccgcgctac ttactctatg gagttcaaga aatattctga agctcctgct
    16021 cacatagctg ctgctgtaac tgaagcccgt aaaggctaat caggcaaata ggccgtccga
    16081 aaggctgaaa tgatttttca gacggcattg ttctttaatc gatctttaat gtaaaggaat
    16141 tagc
//
LOCUS       DBBZYD010000046        15749 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.046, whole genome shotgun sequence.
ACCESSION   DBBZYD010000046 DBBZYD010000000
VERSION     DBBZYD010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15749
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.046"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..215
                     /locus_tag="ACJJDL_001186"
     CDS             <1..215
                     /locus_tag="ACJJDL_001186"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573908.1"
                     /translation="EPPSRHYHESGNLGRRVKKTYIPSFPHKRESKNKKSQKFNGRTE
                     PRKSASRLRLNNRTKEAEIKTSGFFF"
     gene            324..4976
                     /gene="iga"
                     /locus_tag="ACJJDL_001187"
     CDS             324..4976
                     /gene="iga"
                     /locus_tag="ACJJDL_001187"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HGG7573909.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNRRTLTVIDPQYAVSVKHV
                     KGDEISYYGHHNGHLDVSNDENEYRSVAQNDYEPNKNWHHGNQGRLEDYNMARLNKFV
                     TEVAPIAPTSAGGGVETYKNKNRFSEFVRVGAGTQFEYNSRYNMTELSRAYRYAIAGT
                     PYQDVNVTSNLNQEGLIGFGDNSKHHSPEKLKEVLSQNALTNYAVLGDSGSPLFAYDK
                     QEKRWVFLGAYDYWAGYQKNSWQEWNIYKKEFADEIKQRDNAGTIKGYGEHHWKTTGT
                     NSHIGSTAVRLAGNERGANNGQNVTFENNGTLVLDQNINQGAGGLFFKGDYTVKGINN
                     DITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQGQLKVGDGTVIL
                     NQKADSNQKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRLDANGNDLTFEH
                     IRNVDEGARIVNHNTGHTSTITLTGKSLITNPNSLSVHSIQNDYDEDDYSYYYRPRRP
                     IPQGKDLYYKNYRYYALKSGGSVNAPMPENGQTENNDWILMGSTQEEAKKNAMNHKNN
                     QHISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGKISVTQGNVLLSG
                     RPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVNQSASFSSGRNVS
                     DITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKALNSFGATQINGNV
                     NLNQNAALVLGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNLSLADSHIHLNNA
                     SDAQSANQYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGHYQLHVQDKTGEP
                     NQEGLNLFDASSVQDRSRLSVSLANNHVDLGALRYTIKTENGITRLYNPYAENRRRVK
                     PAPSPATNTASQAQTDSAQIAKPQNIVVAPPSPQANQAEEAKRQQAKAEQVKRQQAEA
                     EKVAHQKAEEAKRQQDALARQQAEQERQRLEAERQAAEIAKQKAEAEEAKRRAAEIAE
                     QKAAAEEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKAEAEREAAELA
                     KQKAEEEGRQAAQSQPKRRNRRAIPPELSSDATTRALPRIARNSNPDASDYEEIPLDA
                     LEDEDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAAAQPQAQAVAQADAV
                     STNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGRDYASAQ
                     YRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYGKYYL
                     NDAWYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYS
                     RLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGV
                     NVGGNSFAYKADNQQQYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(5155..6357)
                     /gene="trpB"
                     /locus_tag="ACJJDL_001188"
     CDS             complement(5155..6357)
                     /gene="trpB"
                     /locus_tag="ACJJDL_001188"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HGG7573910.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGSPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(6440..7129)
                     /locus_tag="ACJJDL_001189"
     CDS             complement(6440..7129)
                     /locus_tag="ACJJDL_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG7573911.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLHERGIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAVYRAF
                     FEMAGLCEKQL"
     gene            7326..8105
                     /gene="rsmA"
                     /locus_tag="ACJJDL_001190"
     CDS             7326..8105
                     /gene="rsmA"
                     /locus_tag="ACJJDL_001190"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HGG7573912.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            8278..9006
                     /locus_tag="ACJJDL_001191"
     CDS             8278..9006
                     /locus_tag="ACJJDL_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG7573913.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            9079..9438
                     /locus_tag="ACJJDL_001192"
     CDS             9079..9438
                     /locus_tag="ACJJDL_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573914.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEADLNITPVFDNMM"
     gene            9443..9889
                     /locus_tag="ACJJDL_001193"
     CDS             9443..9889
                     /locus_tag="ACJJDL_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HGG7573915.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLKITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAATLAGSSMVTPYALF
                     LQWDTGGKTVRHCIMPDMTDKESYRKLKVWVLWRQPKKTAETDTSD"
     gene            9920..11194
                     /gene="folC"
                     /locus_tag="ACJJDL_001194"
     CDS             9920..11194
                     /gene="folC"
                     /locus_tag="ACJJDL_001194"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HGG7573916.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERTSEVKKRMKLEPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARSEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPESLLSHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDDPARNRNALPFPALRGTYQLSNAACTLTVLECLNAKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLETVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            11207..12205
                     /gene="ftsN"
                     /locus_tag="ACJJDL_001195"
     CDS             11207..12205
                     /gene="ftsN"
                     /locus_tag="ACJJDL_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HGG7573917.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESRKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAVGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            12198..12695
                     /locus_tag="ACJJDL_001196"
     CDS             12198..12695
                     /locus_tag="ACJJDL_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HGG7573918.1"
                     /translation="MNNLPVADLLVFAIIAACIVLSAMRGVIAEAGSMAAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGVLIVTLLVMLASKTDLPDTEEWQQSYTIPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            12903..14447
                     /gene="purF"
                     /locus_tag="ACJJDL_001197"
     CDS             12903..14447
                     /gene="purF"
                     /locus_tag="ACJJDL_001197"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HGG7573919.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLVGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLVLGSQTDNEGRKSYAVASESVA
                     FNALAYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDDIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            14547..15038
                     /gene="greB"
                     /locus_tag="ACJJDL_001198"
     CDS             14547..15038
                     /gene="greB"
                     /locus_tag="ACJJDL_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HGG7573920.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            15097..15723
                     /locus_tag="ACJJDL_001199"
     CDS             15097..15723
                     /locus_tag="ACJJDL_001199"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HGG7573921.1"
                     /translation="MRKIRTKICGITTLEDAAAAAAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTASDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT         4380 a         4278 c         3857 g         3234 t
ORIGIN      
        1 acgaaccccc atctcgtcat taccacgaaa gcgggaatct aggacgcagg gttaagaaaa
       61 cctacatccc gtcattcccg cacaagcggg aatccaaaaa caaaaagtcg cagaaattta
      121 acggaagaac cgaaccccga aaatcggctt cccgccttcg cttgaataac agaacaaagg
      181 aagcggaaat aaaaacatcg ggattctttt tttaaattga caataaaaca ccaaaattaa
      241 tgatttacac aacaaaaaat agtcaacacc gccaaaccgg cgtaaaatac aagacattat
      301 cacccttaaa acggtaaaac cttatgaaaa ccaaacgttt taaaattaac gccatatcct
      361 tatccatctt tcttgcctat gcccttacgc catactcaga agcggcattg gtcagagacg
      421 atgtcgatta tcaaatattc cgtgactttg cagaaaacaa aggcaaattt tttgtcggcg
      481 caaccgattt atcagtgaaa aacaaacaag gtcaaaacat cggcaacgca ttatccaacg
      541 taccgatgat tgattttagc gttgcagatg tcaacagacg tacattaacc gtcatcgatc
      601 cccagtatgc cgtcagcgtc aaacatgtaa aaggagacga aatctcttat tacgggcatc
      661 acaatgggca cttagatgtt agcaatgatg aaaacgaata tcgttcagtt gcacaaaatg
      721 actacgaacc aaataaaaat tggcatcacg gtaatcaagg tcgtcttgaa gactacaaca
      781 tggcacgcct taataaattc gtaacagaag tcgcacctat tgcaccaacc agtgcaggcg
      841 gcggcgttga aacctataaa aataaaaacc gtttttctga gtttgtgcga gttggagcag
      901 gtacgcaatt tgaatataac agccgctaca atatgacaga gctttcacga gcttatcgtt
      961 atgccattgc aggtacgcct tatcaagacg tgaatgtcac atcgaatcta aatcaagaag
     1021 gcttgattgg cttcggtgat aattcaaaac atcattcccc agaaaaactc aaagaagttt
     1081 tatctcaaaa cgcattgact aactatgctg tgttaggcga tagcggttca ccattatttg
     1141 cttatgataa acaagaaaaa cgctgggtct ttttaggtgc ttacgattat tgggcaggct
     1201 atcaaaaaaa ctcttggcaa gaatggaata tctataaaaa agaatttgca gatgaaatca
     1261 aacaacgcga taacgccggc accatcaaag gttatggcga acatcattgg aaaaccacgg
     1321 gcacaaacag ccatatcggt tcgacagcgg taaggcttgc cggcaatgaa aggggtgcaa
     1381 acaacggaca gaatgttacc tttgaaaaca acggcacttt ggtattggat caaaacatca
     1441 accaaggcgc gggcggtctg tttttcaaag gcgattacac agtcaaaggt ataaataatg
     1501 acatcacttg gctaggtgcg gggattgatg ttgccgacgg caaaaaagtc gtttggcaag
     1561 tcaaaaatcc gaatggcgac agattggcga aaatcggcaa aggcacatta gaaataaacg
     1621 gcacaggcgt taaccaaggg caattaaaag tcggcgacgg tacggttatt ctgaatcaaa
     1681 aagccgattc aaaccaaaaa gtccaggctt tctcccaagt cggcattgtc agcggacgcg
     1741 gtacattggt attaaatagt tcaaatcaga ttaatcccga taacctatat ttcggtttcc
     1801 gtggcggtcg tttggatgcc aatggcaatg acttgacttt tgaacacatc cgcaacgtgg
     1861 atgaaggcgc gcgcattgtc aaccacaaca caggccacac ctccacaatc acgctaacgg
     1921 gtaaatcttt aattaccaat ccgaacagcc tttcggtaca tagtatacaa aatgactatg
     1981 atgaagatga ttatagttat tattaccgac caaggcgacc catcccacaa ggcaaagatc
     2041 tttattacaa aaactatcgt tattacgccc taaaatccgg cggcagcgtg aacgcaccga
     2101 tgcccgaaaa cggacaaacg gaaaataacg actggatttt aatgggcagc acacaagaag
     2161 aagccaagaa aaacgcgatg aaccacaaaa acaatcagca tattagcggt tttagcggtt
     2221 tctttggcga agaaaacgga aaaggacata acggtgcatt aaaccttaat ttcaacggca
     2281 aaagcgcgca aaaccgtttc ttgttaacag gtggcactaa tttaaacgga aaaataagcg
     2341 taactcaagg caatgtcttg ttatcaggtc gtccaacacc acacgcaaga gattttgtga
     2401 acaaatcttc agcccgaaaa gacgcacatt tctccaaaaa caatgaagtc gtatttgaag
     2461 acgactggat aaaccgcaca ttcaaagcca cagaaattgc ggttaatcaa tccgcatcat
     2521 tctcttccgg cagaaatgta tccgacatca ccgccaacat caccgcaaca gacaacgcca
     2581 aagtaaattt gggttacaaa aacggcgatg aggtttgcgt gcgctcggac tataccggtt
     2641 atgttacctg caacacaggc aacttatccg ataaggcttt aaacagcttt ggagcgacac
     2701 agattaacgg caatgtgaat ctgaaccaga atgcggcatt ggtcttgggc aaggctgcat
     2761 tatgggggca aattcaaggg caaggaaaca gccgtgtcag cctaaaccaa catagcaaat
     2821 ggcatttgac tggcgacagc caagtacaca atctgtcatt ggcggatagc catattcatt
     2881 tgaacaatgc ctccgatgcg caaagtgcaa atcaatacca cacgctcaaa atcaatcatt
     2941 tatccggtaa cgggcatttt cattatctga cgcacctggc gaaaaatctt ggggataaag
     3001 tgcttgtgaa ggaatccgca tccggtcatt atcagctcca tgttcaagat aaaacaggcg
     3061 aacccaatca ggaagggctg aatctctttg atgcatcatc cgtacaagac cgctcccgcc
     3121 tttctgtttc cttggcgaat aaccatgtag atttaggggc attgcgttat acaatcaaaa
     3181 cagaaaacgg tattacccga ttgtacaatc cttatgccga gaaccgccgc cgagtcaaac
     3241 cggccccgtc tcctgccaca aacacggctt ctcaagcaca aacggacagt gcacaaattg
     3301 ccaagcctca aaatatcgtc gtcgcaccgc ctagcccgca ggcaaatcaa gccgaagaag
     3361 caaaacgcca acaagcaaaa gcggagcaag tgaagcgtca gcaagcagag gcagaaaaag
     3421 tcgcacatca aaaggctgaa gaagcgaaac gtcagcaaga tgcccttgcc cgccaacaag
     3481 cagagcaaga acgccaacga ttggaagccg aacgccaagc tgccgaaatt gccaaacaaa
     3541 aagcagaagc cgaagaagcg aaacgccgag ccgctgaaat tgccgagcaa aaagcagctg
     3601 ccgaagaagc aaaacgccaa gctgccgaac ttgcacgcca acaagaagaa gcacgaaaag
     3661 ctgcagagtt ggctgctaag caaaaagcgg aaactgaacg caaagcagca gaaattgccg
     3721 agcaaaaagc ggaagccgaa cgtgaagccg ccgaacttgc caagcaaaag gcggaagaag
     3781 aaggtcgcca agcagcacaa tctcaaccca aacgtcgtaa ccgcagggct ataccaccgg
     3841 aactgtcatc tgatgcaaca acccgagctt tgcctaggat agcgagaaat tcaaatcctg
     3901 atgccagcga ttatgaagaa atccccttgg atgcgttgga agatgaagat gtatccgaat
     3961 cggttgacac atcagacaaa cagcctcaag acaatacgga acttcatgaa aaagttgaga
     4021 cagtgagttt gcaaccaaga gccgctcagc cgcgagccca agccgccgcg cagccgcaag
     4081 cccaagccgt cgcgcaagcc gatgcagtca gcaccaatac caactcggct ttatctgacg
     4141 caatggcaag cacgcaatct atcttgttgg atacaggtgc ttcattaaca cggcacattg
     4201 cacaaaaatc acgcgctgat gccgaaaaaa acagcgtttg gatgtcgaac atcggttatg
     4261 gccgtgatta tgcttccgca caatatcgcc ggtttagttc gaaacgcacg caaacacaaa
     4321 tcggcattga ccgcagcttg tccgaaaata tgcagatagg cggcgtattg acttactctg
     4381 acagtcagca tacttttgat caggcgagcg gcaaaaatac ttttgtgcaa gccaaccttt
     4441 atggtaagta ttatttaaat gatgcttggt atgtggccgg cgatattggt gcaggcagct
     4501 tgagaagccg gttacaaaca cagcaaaaag caaactttaa ccgaacaagc atccaaaccg
     4561 gccttacttt gggcaatacg ctgaaaatca atcaattcga gattgtcccc agtgcgggaa
     4621 tccgttacag ccgcctgtca tctgcagatt acaagttggg taacgacagt gttaaagtaa
     4681 gttctatgtc agtgaaaaca ctgacggccg gactggattt tgcttatcgg tttaaagtcg
     4741 gcaaccttac cgtaaaaccc ttgttatctg cagcttactt tgccaattat ggcaaaggcg
     4801 gcgtgaatgt gggcggtaat tccttcgcct ataaagcaga taatcaacag caatattcag
     4861 caggtgccgc gttactgtac cgtaatgtta cattaaacgt aaatggcagt attacaaaag
     4921 gaaaacaatt ggaaaaacaa aaatccggac aaattaaaat acagattcgt ttctaaaata
     4981 ctaaattcat agcaaaataa aatgccgtct gaactcaggc ttcagacggc atttttatag
     5041 tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacagat agtacggcaa
     5101 ggcgaggcaa cgccgtactg gtttttgtta atccactata tcagacggac gaggttacag
     5161 tttaatccct ttgagcttcg cgacggtatt gatgtctttg tcgccacgac cggataggtt
     5221 gaccagaatc acttggtctt tgcccatttt cggcgcgttt ttcaccgccc aagcaacggc
     5281 gtggctggat tcgagcgcgg ggatgatgcc ctcgaagcgg cagagcaaat caaaggcttc
     5341 gagtgcttcg tcgtctttag cgacggtgta ttcgacgcgc ttgatgtcgt gcagatggct
     5401 gtgttccggg ccgatgccgg ggtaatccaa gcctgcggaa acagagtgtg tacccaagac
     5461 ttgaccgttt tcgtcctgca tcagatagct gcggaaaccg tgcaatacgc caatcggtga
     5521 gcccgaagta atcggcgcgg cgtgatcggg ggtgttcacg cccaaaccgc cagcctccac
     5581 gccgacgagg cgcacgtttt cttcgccgat atacgggtgg aacaaaccaa tggcgttcga
     5641 tccgccgccc acgcaggcaa cggcaacgtc gggctgtctg ccgatggctt ccaacatttg
     5701 ttctttggct tcattgccga tcacgcattg aaagtcgcgc accatttcgg gatacggcgc
     5761 gggaccggcg gcggtaccga tgatgtagaa tgtgtcatcc acgcgggcga cccattcgcg
     5821 catggcttcg ttcatcgcgt ctttcaaagt acggctgccg ctgtcaacgc cgacgacatt
     5881 cgcgcccaat aatttcatac ggaacacgtt gggcatttgg cgttggatgt cgtccgcacc
     5941 catgtacacg tcgcaagtca tgccgaagcg ggcggcaaca gtggcactcg ccacgccgtg
     6001 ctgacccgcg ccggtttcgg cgatgacgcg ttttttaccc atacgttttg ccaacagtgc
     6061 ctgaccgatg gtgttgttga ctttgtgcgc gccggtgtgg ttcaagtctt cgcgcttcaa
     6121 ccagatttgc gcaccgccca aatgctcgga caaccgcgcg gcgtggtaaa cggggctggg
     6181 cctgccgaca taatgtttca aatcgcggtg gaattcttcc caaaacgacg ggtcgttttt
     6241 cgctgcctta taggcatccg ccagctcttg caaagcggga atcagggtct cggacacgaa
     6301 cagcccgccg tgttcgccga aaaagccctt ctcgtcgggc gcgtggtagt tcttcatcgg
     6361 attcttcctt gtgcttcagg ttttcaaacg gcatttccgt tttttcaaac atgccgtccg
     6421 aacgggaaat tgtcggcaat tataactgct tttcacacaa gcccgccatt tcgaaaaacg
     6481 cccgatacac cgccgccttt ttcgccaaac tcaaaggata ggcgcgcgaa gtcgaaggca
     6541 ggcgcgtcag cgtcaaatcc cgtccggcaa acggaaacgg cacggtttcg cccgttttcg
     6601 gcattttgat gccgccaccc tgaatatcga gcaggatttc cgtcgccttg ccgcctgtcg
     6661 tacaaatatg gcggcactcg ggtatttttg ccaacaccgc cgccaaatcg acggtttcaa
     6721 ctacctttaa aaacttgtcg gacgcattgc cgtgttccct tgccgccttc aacacggtcg
     6781 gacaggacgc aatcccccgt tcgtgcaaaa acgccttgat tttctcggca tcaaacgctt
     6841 tttcagacaa cctttggaaa tgcgccgcat cattaaaaaa caccagcccg taaacgcgcc
     6901 acatatcgtt ttggaaattc ggataatgaa actgcatcgc gcgtttgtct tccttgggcg
     6961 gaaacgtccc catcatcatg accgcagcct tcggcggcaa cacggaatcg aagggatggg
     7021 tttcgatttc aagcagattt tcagacacgt tcaatcctcc aacaggcaaa acggcagaca
     7081 gccggttttt gcaccaaacc gccaaacacg gcaagccttc aaacagcatt atcacgccct
     7141 gccgttttcg gttacaatgc cgacatcaaa cggatactgt aaacacattt atgttccaac
     7201 acacaggacg acacttaaag caccgcccta tgtgccatcc tgatttggaa ggagttacgc
     7261 ccctcccaaa tagagtctga ttctaccgcc ctaaagggcg gggtttcaac cgaaaaggaa
     7321 acacgatgaa agaacacaaa gcccgcaagc gtttcgggca gaattttttg caggacacgc
     7381 ggatcatcag cgatattgtc aacgccgtgc gcccgcaggc ggatgatgtc gtgattgaaa
     7441 tcggcccggg tttggcggcg attaccgaac ctttggcgaa aaagctgaac cgcctgcacg
     7501 ttgtcgaaat cgaccgcgac atcgtatgcc gtctgaaaac gctgccgttt gcggataaac
     7561 tggtgattca cgaaggcgat gtattgcagt ttgatttcaa cggcatcgca ggcaaaaaga
     7621 aaatcgtcgg caacctgccc tacaacattt ccacgccgct tttgttcaag ctggcggagg
     7681 tggcggacga tgtcgtcgat atgcacttta tgctgcaaaa agaagtggtc gatcgtatgg
     7741 ttgccgcgcc gaaaagcaac gactacggcc gcttgggcgt gatgctgcaa tatttcttcg
     7801 atatggaaat gctgattgac gtgccgcccg aatcgttcga ccccgcgccg aaagtggatt
     7861 cggccgtcgt ccgcatgatt ccggtgaaac accgtatcgg caaggcggac gatttcgagc
     7921 atttcgccaa actcgtgaaa ctcgccttcc accaacgccg caaaaccata cgcaacaatc
     7981 tgaaagagct tgcaggcgac gatgatttgc aggcagtcgg catcaatccg caagaccgcg
     8041 ccgaacatat cgcgccggag aaatatgtgg cgttgagcaa ttatctggcg ggcaaggccg
     8101 tctgaaaagg gagtaagccg atgacgaaat acctgctttt acccctgata ctgccgcttg
     8161 cagcctgcct gaccaatccg aacgaccgtt tttttgacgg cagacgctac acgcttcatc
     8221 atatggagct cccgtaacga caacctgcaa cggcaaatgc cgtctgaaag aaaagacatg
     8281 atcaaattca aaaacgtaca caaacatttc aaagacctgc acgtcatcaa cggcgtgaac
     8341 ttggaaatca aaaaaggcga agtggtcgtc gtctgcggac cttcgggcag cggcaaatcc
     8401 acactcatcc gcaccgtcaa ccagcttgaa agcatcgaaa gcggcgagat ttgggtggac
     8461 ggtgtcaacg ttgccgaccc aaaaaccgat ttgaacaaaa tccgcgaaga agtcggcttt
     8521 gtgtttcaaa gtttcaacct ctacccccac ctgaccgtat tggaaaacat caccctcgca
     8581 ccgatgaagg ttaaaggtca aaatgcggaa caggcggaga aaaaagcgat ggaacttttg
     8641 gaacgcgtcg gactggcgca caaaaaagac gcttttccgt cccaactttc cggcggccag
     8701 cagcagcgcg tggcgattgc acgcggtttg gcgatggaac cgcgcgtaat gttgtttgac
     8761 gaaccgacct ccgcactcga ccccgaaatg gtcggcgaag tgttgaaagt gatgaaagac
     8821 ttggcagaaa gcggcatgac catgatgtgc gtaacccacg aaatggggtt tgcccgcgaa
     8881 gttgccgacc gcgtgatttt cgtcgataaa gggcaaatcc tcgaagacga aacgcccgaa
     8941 gcgtttttca ccaacccgaa acacgaacgc gccaagcagt tcctgcaaca ggtcatgacc
     9001 cactgatgct ataccgtctg aaaaccgaac gttcagacgg catagcccga caccgcaaga
     9061 tgattgagaa agaaaaccat gtattttgtt gaccgcaccg ccgtcgtcct caagccgacc
     9121 gtccgctttt tggaatggct caaaagcacc gacgaaaata tgcccgacct gaccatagag
     9181 cagcttcgtg ccaactgctc cgtcttcctc gttccgcagt tcgacgaacc ggaagccgtc
     9241 gtttcctatt tcgacgaacg ctaccgccag atttttgaag ccgaactcgc cggctgggac
     9301 atcgacaagg ataaatggcc gcaagatatg gggctgaagg cgttttggga atttttcgac
     9361 atcgaaatcc acgatatggt gttggatatg gaagaagcgg atttgaacat cacgcccgtg
     9421 ttcgacaata tgatgtaacg ccgtgcgcgc ctttcagaca gcattgaggc cgtcccgcat
     9481 cctgaacatc ctgaccgtat cgctccactc ggcttccctt gccgtctgcc tgacctggtt
     9541 ttacggccgg atgatgtggt tcggtttggc ggctttggcg gcaagttacg catactcgct
     9601 caagataacg aatctgaaac accgccatgc cataaccgcc attaccatag accgcgacgg
     9661 acaggcggaa atcgtatccg gcaaagaaaa aacagcaaag gcggcaacac ttgcgggcag
     9721 cagtatggtt acgccttatg ccttattctt acaatgggac accggcggca aaaccgtccg
     9781 ccactgcatc atgcccgaca tgacggacaa agaatcctac cgcaagctga aagtctgggt
     9841 actttggcgg cagccgaaaa aaaccgccga aaccgataca tcagactgat ttcagacggc
     9901 atttgaaaac gaaacactca tgaaaacact acaagactgg ctctcgcatt tggaaaccgc
     9961 ccacagcggc ggtttgatcg acatgggttt ggagcgcacg agcgaagtga aaaaacgcat
    10021 gaagctcgag ccgcaatgcc ccgtcgtcgt tgtcgcggga accaacggca aaggttcggt
    10081 ctgtgcctac ctgacacaga tttacaaaca ggcgggctac aaaaccggta cgctgaccag
    10141 cccgcattta ttgcgttaca acgaacgcat cgccatcaac gccgaacccg tttcggacga
    10201 tacgattatt gcctctttcg agcgcatcga agcggcgcgc agcgaaatat cgctgactta
    10261 ttttgaattc aatacgttgg cggccgtcga catcttcatg cgcgaacagg ttgacgtgat
    10321 gatattggaa gtcggcttgg gcggacgctt ggacgcggtc aacgcatttg acggcgattg
    10381 cgcggtggtt actagtgtag atttggacca tcaggcgttt ttgggcgata cggtcgagca
    10441 ggtcggcttt gaaaaagcag gcgtgttccg cagcggcaaa cccgcaatct gcggtcaaaa
    10501 ccccgcgccc gaatcgttgc tttcacacgc cgaagccata ggcgcgaaac tgctgatggt
    10561 gcagcgcgat ttcgagtttc acgcgatgga aaacatccaa tggaactacc gcttccggcc
    10621 gcaacattca gacgaccccg cgcgcaaccg caatgccctg cccttccccg cattgcgcgg
    10681 cacataccaa ctttccaacg ccgcctgcac gttgaccgta ttggaatgct tgaacgccaa
    10741 attgccggtg gacatcggcg ccatcaaacg cggattgctg ctggttgaaa atcccggacg
    10801 cttccaagtc ctgcccggcc gtccgctgac cgttttggat gtcggacaca atccccacgc
    10861 tgcccgcgcc ctgcgccgca gcctgattaa tttggcgttt gcgcaaaaac gcaccgccgt
    10921 gttcagcatg ttgtccgaca aagacataga cggcgtgttg gaaaccgtta aagaccagtt
    10981 tgacgagtgg tatatcgcac cgttggatgt accgcgcggc atgacgctcg agagcctgca
    11041 aaacaaactg cacgaacaca gcatcgaaaa catacaaaca ttcgccgccg tccgcgaagc
    11101 ataccgggcg gcagcctcaa aagcgggcga gaacgacaga atcgtcgttt tcggctcatt
    11161 tcataccgtt gccgatgtca tgtcggtact ttaaaaggaa acttctatgt ccgaaaacaa
    11221 acaaaacgaa gtcctgagcg gttacgaaca actcaaacgg cgcaaccgcc gccgcctcgt
    11281 aacggcaagt tgcctggttg ccgcctcctg catcctgctg gcagccgccc tcagttccgg
    11341 ccctgccgaa cagactgccg gcgaaacaag cggcgtagaa aacaaagcgg caggtgcggc
    11401 acaaacccct gccttgaaat ccgccgccga caaaccgcag gacttggcag gcgaagacaa
    11461 gccttctgcc gccgacagcg aaatcagcga gcctgaaaac gtaggcgcgc cgctggtgct
    11521 gattaacgac cgcctcgaag acagcaacat caaaggtttg gaagcatccg agaaactgca
    11581 acaggcagaa accgccaaaa ccgcaccgaa gcaggcaaaa caacgcgctg ccgaaaaagt
    11641 gccggcaact gccgacagta cggatacggt agcggttgaa aaaccgaaac gcactgccga
    11701 aacaaaaccg caaaaagcgg aacgcactgc caaagccaag cccaaagcca aagaaaccaa
    11761 aaccgccgaa aaagttgccg acaaaccgaa aactgccgcc gaaaaaacca aaccggatac
    11821 ggcaaaatcc gacagcgcgg taaaagaagc gaaaaaagcc gacaaggctg aaagcagaaa
    11881 aacagccgaa aaagaccgtt cggacggcaa aaaacacgaa acggcacaaa aaaccgacaa
    11941 agcggacaag accaaaaccg ccgagaagga aaaatccggt aaaaaagccg ccattcaggc
    12001 aggttatgcc gaaaaagaac gcgccttaag cctccagcgc aaaatgaagg cggtgggtat
    12061 cgattcgacc atcaccgaaa ttatgaccga caacggcaaa gtttaccgcg tcaaatcaag
    12121 caactataaa aacgcaaggg atgccgaacg cgatttgaac aaattgcgtg tacacggtat
    12181 cgccggtcag gtaacgaatg aataacctcc ccgttgccga cctcctcgtc ttcgccatca
    12241 tcgccgcctg catcgtgcta tccgcgatgc gcggcgtgat tgcggaggca ggttcgatgg
    12301 cggcatgggt ggtttccttc ttttttgcca aactctttgc cgcacccttc gccgacctcg
    12361 cctttgcctc gttccaaccc cgcctgtttg cattggctct gtcgttcatt tccctgttcg
    12421 tcattgcctg tctgatccag aaaatgctcc gttcgctgct gaccggcgca gtttcggcgg
    12481 tcggtttggg ctttgccaac cgcattttgg gcggcgtatt cggtgcattg aaaggcgttt
    12541 tgattgttac cctgctggtc atgcttgctt caaaaaccga cctgcccgat accgaagagt
    12601 ggcagcagtc ctataccata ccgtttttcg tatcgctttc cgaagccgtg ttgaaccata
    12661 gcggcggcac ggcggaaact ccggaagacg attgattgcc atacggatat ttcagacggc
    12721 attctctttt atgccgtctg aaatgttttt tccttttctc agccatatca cagattaaat
    12781 cttatcctcc ataaacccac ctatctgtcc ttcgctcaaa tattgtcaac aattcaggca
    12841 aaaaaccacc gtttgcttta taattccgtt ttacccttaa acctcgaatc ggagaagacg
    12901 atatgtgcgg cgtattaggt ttggtcagtc atgaacccgt gaaccagctt ctgtacgacg
    12961 gtttgcagat gttgcagcac agggggcagg atgcggcggg cattgcaacg gcggaaggcg
    13021 gcaccttcca tatgcacaaa ggcaaaggga tggtgcgcga agtgttccgc acgcgcaata
    13081 tgcgcgattt ggtcggcaac gccggcatcg cccacgtccg ttatcctacg gcgggcaacg
    13141 ccggcagcag cgcggaggcg cagcctttct acgtcagctc gcctttcggc atcgttttgg
    13201 cgcataacgg caatctcacc aacacggccg aactgtatga aaacgtgtgc aacaaacacc
    13261 tgcgccacgt caacaccagc tccgattccg aagtcttgct caacgtattc gcgcacgaat
    13321 tacgccgcga agtctccaaa aacgccgatc cgcaccggct caatgccgac aatattttca
    13381 acgccgttgc cgaagtccac cgcctagtgc gcggcgcata cggcgtggtt gccatgattg
    13441 cgggctacgg tatgcttgcc ttccgcgacc cttacggcat ccgcccgctg gtattgggtt
    13501 cgcaaaccga caacgaaggc aggaaatcct atgccgtcgc ctccgaatcc gtcgccttca
    13561 acgcgcttgc ctacgatttg gaacgcgaca tccggccggg cgaagcggta tttgtcggct
    13621 ttgacggcac aatgattgcc cgccaatgca gcgaccgtgc caaactcagc ccctgccttt
    13681 ttgaatatgt ttattttgcc cgccccgact ccgtaatcga cggcgtatcg gtttaccaat
    13741 cgcgcttgga tatgggcgtg tccttggcgg aaaaaatcaa acgcgagctg cccgtggacg
    13801 acatcgatgt cgtgatgccc attcccgaca ccagccgccc cagcgcgatg gagcttgccg
    13861 tccacctcga caaaccctac cgcgagggct tgattaaaaa ccgctatatc ggccgcacct
    13921 ttattatgcc cggccaggcg acgcgcaaaa aatccgtgcg ccaaaaactc agcccgatgg
    13981 aaaccgagtt tgcaggcaaa agcgtgttgc tggtggacga ctccatcgtg cgcgggacga
    14041 ccagccgcga aatcgtcgaa atggtacgcg cggcgggcgc gcgcaaagtc tatatcgcct
    14101 ccgccgcccc cgaagtgcgc tatcccaacg tatacggcat cgatatgccc acgcgcgaag
    14161 agttgattgc caacgggcgc agcgcggcgg aaatcgccgc cgaaatcggc gcggacggca
    14221 tcgtgttcca aaatttgagc gatttggaag ccgtcgtcaa agcactcaat ccgaaaatcg
    14281 aatccttcga ttcgtcctgt ttcaacggca tttatcagac cggcgacatc gatgatgcct
    14341 acctcgaccg cctgtctgcc gagaaatccg gctgcggcgg cctgaaaatc cacccgagta
    14401 ggatggaaca cagcatcagc atcagcgatg cgggcgacga agaataaggc ttcccaaacc
    14461 gcgatgccgt ctgaaatccg aacgccgggt tttcagacgg catttcccat atcggcatca
    14521 catttcccat ttcatccgca cgcaatatga gtaccgaaac caaaaactac attacgcccg
    14581 ccggatggca ggcattgaaa gacgagcttt atcaactggt taataaagaa cgccccgaaa
    14641 tcgtccaaat cgtcaactgg gcggcaggca acggcgaccg cagcgaaaac ggcgactatc
    14701 tttacggcaa acgccgtatg cgcgaaatcg accgccgcat ccgtttcctg accaagcgtt
    14761 tggagtccgc cgtcgtcgtc gatcccgaat tgcgcgaagc gaccgaccaa gtatttttcg
    14821 gcgcgacggt cgggctgttg cgcggcgacg ggcgcgagca aaccgtcaaa attgtcggca
    14881 tcgatgaaat cgataccgcg caaaacaaaa tttcttggat ttcgccgttg gcgcgttgcc
    14941 tgattaaagc gcgcgaaggc gacgaagtgg ttttgaacac gccggaaggg cgtgaggaaa
    15001 ttgaaatcct ttctgtcgaa tacatcaaaa tcgactgatc gggaatgccg tctgaaacgg
    15061 cacaaacgca tcgtttccca aataaaggaa taccgaatga ggaaaatccg caccaaaatc
    15121 tgcggcatca ccacactgga agacgcagcg gccgccgcag cggcaggtgc ggatgccgtc
    15181 gggctggtct ttttccaagg cagcagccgg gccgtcgata ttgcccgcgc caaaaaaatc
    15241 accgccgcac tgccgccgtt tgtcagcgtt gtcgcccttt tcgtcaacga aagcgcgcaa
    15301 aacatccgcc gcatccttgc cgaagtgccg atacacatca tccaattcca cggcgacgaa
    15361 gacgacgcat tctgccgcca gttcgaccgc ccctatatca aggccattcg tgttcagacg
    15421 gcatcagaca tccgaaacgc cgccgaccgc ttccccgacg ctcaggcact gctgttcgat
    15481 gcctaccacc cttcggaata cggcggcacc ggacaccgct tcgactggac gctgctggcg
    15541 gaatattcgg gcaaaccgtg ggtgcttgcc ggcgggctga cccctgaaaa cgtcggcgaa
    15601 gccgtccgca tcaccggagc ggaagcggtc gatgtatccg gcggcgtgga agcgtctaaa
    15661 ggcaaaaaag acccagccaa agttgccgcc tttatcgcaa ccgccaaccg cctatcccgt
    15721 taaagcaaca aaaattgccg ccggaatga
//
LOCUS       DBBZYD010000047        15672 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.047, whole genome shotgun sequence.
ACCESSION   DBBZYD010000047 DBBZYD010000000
VERSION     DBBZYD010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15672
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.047"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            111..842
                     /locus_tag="ACJJDL_001200"
     CDS             111..842
                     /locus_tag="ACJJDL_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7573922.1"
                     /translation="MSREINAGRHHFLYGGISGGGVHYWDNKDFSEQSLRLSFGYKNR
                     SVTRSFGIVPFVEQNLLGGSRYNFVGGFNADFSQRLSERWRLTLNAGNMWKHYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHNITKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTIVYRFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNMQIFMSVEKDFK"
     gene            959..2467
                     /gene="ppx"
                     /locus_tag="ACJJDL_001201"
     CDS             959..2467
                     /gene="ppx"
                     /locus_tag="ACJJDL_001201"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HGG7573923.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEVV"
     gene            complement(2676..3041)
                     /locus_tag="ACJJDL_001202"
     CDS             complement(2676..3041)
                     /locus_tag="ACJJDL_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573924.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAKEAVTEAKEAVTEAAKDTL
                     NKAADATQEAADKMKDAAK"
     gene            complement(3361..3702)
                     /locus_tag="ACJJDL_001203"
     CDS             complement(3361..3702)
                     /locus_tag="ACJJDL_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573925.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEEGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            complement(3708..4718)
                     /gene="trpS"
                     /locus_tag="ACJJDL_001204"
     CDS             complement(3708..4718)
                     /gene="trpS"
                     /locus_tag="ACJJDL_001204"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HGG7573926.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFKEIFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            4979..7558
                     /gene="clpB"
                     /locus_tag="ACJJDL_001205"
     CDS             4979..7558
                     /gene="clpB"
                     /locus_tag="ACJJDL_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HGG7573927.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDG
                     LEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            complement(7645..8859)
                     /locus_tag="ACJJDL_001206"
     CDS             complement(7645..8859)
                     /locus_tag="ACJJDL_001206"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HGG7573928.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(8948..9157)
                     /locus_tag="ACJJDL_001207"
     CDS             complement(8948..9157)
                     /locus_tag="ACJJDL_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HGG7573929.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLAHVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            9502..10308
                     /locus_tag="ACJJDL_001208"
     CDS             9502..10308
                     /locus_tag="ACJJDL_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HGG7573930.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            complement(10366..11631)
                     /locus_tag="ACJJDL_001209"
     CDS             complement(10366..11631)
                     /locus_tag="ACJJDL_001209"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HGG7573931.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDDTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKIVAVSTVDVAIYNENGLDMEAIIKEFQTKGFITNE
                     AGYGKEISNAELLALEVDVLAPCALENQLTSENAGKVRATIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            12038..12745
                     /locus_tag="ACJJDL_001210"
     CDS             12038..12745
                     /locus_tag="ACJJDL_001210"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HGG7573932.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLSNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKEE"
     gene            12802..13263
                     /gene="recX"
                     /locus_tag="ACJJDL_001211"
     CDS             12802..13263
                     /gene="recX"
                     /locus_tag="ACJJDL_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HGG7573933.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            13337..13498
                     /locus_tag="ACJJDL_001212"
     CDS             13337..13498
                     /locus_tag="ACJJDL_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573934.1"
                     /translation="MSEQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWAGVLALVF
                     FLVFRFWLS"
     gene            13651..14133
                     /locus_tag="ACJJDL_001213"
     CDS             13651..14133
                     /locus_tag="ACJJDL_001213"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG7573935.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(14340..15587)
                     /locus_tag="ACJJDL_001214"
     CDS             complement(14340..15587)
                     /locus_tag="ACJJDL_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG7573936.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPAGDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPKTAAVK
                     SRPAVPAAAQPPVQSAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNML
                     SIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAENKA
                     VPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAAAD
                     GKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDAS
                     RTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT         3934 a         4272 c         3932 g         3534 t
ORIGIN      
        1 ctataaacaa cgcttcgtcc aaaaaaacga ttgaatttgc gggcagaagc tggacgaaaa
       61 ccgccgacag cctgccgcaa aaggcacacg gtttgcgcta gggcttaggc gtgtcgcgcg
      121 aaatcaatgc gggcaggcat catttcctct acggcggcat cagcggcggc ggcgtgcatt
      181 attgggataa caaagatttc agcgaacaga gcctgcgcct gtcgttcggc tataaaaacc
      241 gttcggtaac gcgctcgttc ggcatcgtgc cgtttgtcga gcaaaacctc ttaggcggca
      301 gccgatacaa tttcgtcggc ggcttcaatg ccgatttctc ccaacgcttg agcgaacgct
      361 ggcggttgac actaaacgcg ggcaatatgt ggaagcatta tcaggaagac cgcaccgccg
      421 cccgatacga cagccatatg ccgctggcgg gcgcgacgct gatgtattcc gcgccgaaag
      481 actggctgct ttacggcggt gcggactggt cgcacaacat aacaaaagag gcggaacagg
      541 cttccatccg caagggtttg cgtgtcggcg cggtcaaaac gttcgacggc gggctgggtc
      601 tgcgggcaaa cctgcgctat acccgcagga cgtttgatgc acccgggacc attgtgtacc
      661 gcttcccgcg taaagaccac gaatatcagg caaacctgtc gttgtggcac gacaaaatct
      721 cttggaaggg atttacgccg caactcaatt tccgctatct gaaaatcgac agcaatatga
      781 aaagttttta cacacgcaaa aacatgcaga ttttcatgag cgtggaaaag gatttcaaat
      841 aagcgcaaaa aatgccgtcg gcaacatccg tgagcagaat caaaaacagc cgcatcattt
      901 attgtcaacg cctgcgccgt cagagtaaca ttgcgttttt cccccaccga tatccgccat
      961 gaccaccacc cccgcaaaca tcctcgcctc cgtcgatttg ggttccaaca gttttcgcct
     1021 ccagatttgc gaaaacaaca acggacaatt aaaagtcatc gattcgttca aacagatggt
     1081 gcgcttcgcc gccggactgg acgaacagaa aaacctgagt gccgcttccc aagaacaggc
     1141 tttggactgt ctggcaaaat tcggcgaacg cctgcgcggc ttccgccctg aacaggtacg
     1201 cgccgtggca accaatacat tccgcgtcgc caaaaacatc gcagatttcc ttcccaaagc
     1261 cgaagcggca ctgggtttcc ccatcgaaat catcgccggg cgcgaagagg cgcggctgat
     1321 ttataccggc gtgatccaca ccctcccccc gggcggcggc aaaatgctgg ttatcgacat
     1381 cggcggcggt tcgacagaat ttgtcatcgg ctcgacgctg aatcccgaca ttactgaaag
     1441 cctgcccttg ggctgcgtaa cctacagcct gcgcttcttc caaaacaaaa tcaccgccaa
     1501 agacttccaa tctgccattt ccgccgcccg caacgaaatc cagcgcatca gcaaaaatat
     1561 gaggcgcgaa ggttgggatt tcgccgtcgg cacatcgggt tcggcaaaat ccatccgcga
     1621 cgtgcttgcc gccgaaatgc cccaagaggc ggacattacc tacaaaggaa tgcgcgccct
     1681 cgccgaacgc atcatcgaag ccggttcggt caaaaaagcc aaatttgaaa acctgaaacc
     1741 ggaacgcatc gaagtttttg ccggcggact tgccgtgatg atggcggcgt ttgaggaaat
     1801 gaaactcgac aggatgaccg taaccgaagc cgccctgcgc gacggcgtgt tttacgattt
     1861 gatcgggcgc ggtttaaacg aagatatgcg cggacaaacg gttgccgagt tccaacaccg
     1921 ctaccacgtc agcctcaatc aggcgaaacg caccgccgag accgcgcaaa cctttatgga
     1981 cagcctctgc cacgctaaaa acgttacagt tcaagagctt gccttgtggc aacagtatct
     2041 cggacgcgcc gccgcgctgc acgaaatcgg tttggacatc gcccacaccg gctatcacaa
     2101 gcattccgcc tacatcctcg aaaacgccga tatgccgggt ttctcacgca aagaacagac
     2161 catacttgcc caactggtca tcggtcatcg cggcgatatg aaaaaaatga gcggcatcat
     2221 cggcaccaac gaaatgttgt ggtatgccgt tttgtccctg cgccttgctg ccctgttctg
     2281 ccgttcgcgc caagacctgt ctttcccgaa aaatatgcag ttgcgcacgg atacggaaag
     2341 ctgcggcttc atcctgcgta ttgacaggga atggctggaa cgccatcccc tgattgccga
     2401 cgcattggaa tatgaaagcg tccaatggca aaaaatcaat atgccgttta aagtcgaggt
     2461 cgtctgaacc ttacggaaca aatgccgtcc aaaccctgtc cagacggcat ttgcctgtcc
     2521 gcaacatccc gatatgcgcg gcacatctgc tcggaacggt catgcaggcg taaaaaacaa
     2581 ggggcataca actcaaaaac cgcctgaaaa tcttcaggcg gtttcgtttg ggttgccggc
     2641 aggcggcatc ccatcatttt tgccaaggca acaaattatt tggcggcatc tttcattttg
     2701 tctgccgctt cctgagtcgc gtcggcagct ttgttcaaag tatctttagc tgcttcagtt
     2761 acagcttctt tggcttcagt tacagcttct ttggcttcag ttacagcttc tttggcttca
     2821 gttacagctt cctcggcact tgcctttgca tcagccgcag catctttgac ttggtctttc
     2881 gcttcttcga cggcagaagc ggcagactcg gcggcagaag ccgcagtgtc tttaacatcg
     2941 gactcaacgg cttgaaccgc ttccttaacc tcctgtttgg cttcttgcga acaagctgcc
     3001 aaggcagccg ccatcattgc ggcaatcaat aattttttca tgtcttatcc ttcttgagtt
     3061 gttgattaag gttttgctta aaaatcgaac cgtgttccat caatcggctg attttgccca
     3121 tcggccggag agaaaacggt ttcccgttta gttaaaaccc attatattta aatataaagg
     3181 tttttttctc gaacaataag gcggcatcaa tgccatattg aaacacgtcc gaaaactatt
     3241 ttatgaaaac agttcggaaa attgtaacac atatccccct ccttttgagt ttccctgcgg
     3301 tgcggacttt ttttcgcaag gtttgaaaaa cccaaatata ttccgggatg tccgaatacc
     3361 tcaataatgg cggcggcgga aataaaacgc cccctcgctg tcgatttcca gcacatagcg
     3421 tccgttctgc acggcggcat agccgctttt gcctgcctga tagggttgca gggcggaatg
     3481 cgaaatcagg taatccgtca gtttgccgcc ttcttcggcg atattgccca ccagtttggc
     3541 aaacaaggta tggcacacgc cgttttccgc ccagcctacc ggaccgccct tatcgtcggt
     3601 ttccatgcat ttgccgctga cggcttccaa gtcgttggga tgcttgccgg tcagccggac
     3661 gacgttttgt tccggcaagc ctttaagagg ttcggacggc atcgggttta tttcaacggg
     3721 cggatgccga ccgcatcgcg tactttgtcc aacaattcgc gtgcttcttt acgcgctttt
     3781 tgcgcgcctg cctgcaaaat ctcttcgatt tgcgaagggt cggcggtcag ctcgttgtag
     3841 cgttcgcgcg gttcggcgag ttcggcgttg attttcgccg ccaaaagttt ttttgcctcg
     3901 ccccaagcca agccttcggc aagcatttgc gtgaacgctg cggtttcaga cggcgtggag
     3961 aaggctttgt agatttcaaa caatgggctt tcgtcgggct gtttcggctc gcccggctct
     4021 ttcatattgg tgatgatttt gttgaccgat ttttgggttt ttttgtcgtt ttcccaaagc
     4081 ggaatggtgt tgccgtagga tttggacatt ttgcgtccgt ccaaaccgac caagagttcg
     4141 acgttttcgt cgattttcac ttcgggcagg gtaaagattt ctttaaagcg gtgattgaag
     4201 cggccggcga tgtcgcgcgc catttcgacg tgttggattt ggtcgcgccc gacgggcact
     4261 tcgttggcgt tgaacataag gatgtcggcg gtcatcagaa tcggatagct gaacaaaccc
     4321 atttccacgc cgaaatcggg gtcttcctgc ccgttttccg catttgcctg cacggcggct
     4381 ttgtaggcgt gggcgcggtt catcaaaccc ttggcggtga tgcaggtcag aatccagttc
     4441 aattccatca cttcgggaat gtcgctttgg cggtagaagg tggtgcgctc ggggtcgagt
     4501 ccgcaggcaa gccaagtggc ggcaacggct tgggtggatt ggtgaatcat ctccggctcg
     4561 tggcatttga tgataccgtg gtaatcggcg aggaagagga aggattcggt atcagggttt
     4621 tgcgccgcgc ggacggcggg gcggatagca ccgacgtagt tgcccagatg cgggatgccg
     4681 gtggtggtta cgccggtcag aactcgtttt ttgctcataa aaatgtcctt gcggcatcaa
     4741 tgccgtctga aagggaaaaa gatgcgccga ttatacccga tttgccacct acatccagcc
     4801 gacaacagac ttttccatat taagaagata tagttataca cattattata catttttata
     4861 tactttaaat tcaatgatat atcgaattaa atatagaaaa acagaaaaca gaacttgagt
     4921 tatccacaat tatgcacata taggcttcga cagcggacat tttgaaaagg aaacaaaaat
     4981 gcgatacgac aaattaaccg ccaaattcca acaggccctt gcagaagctc agagtttggc
     5041 gttggctgcg gacagcagct atctggaagc gggctttgtg ctgaaagccc tgcttgacga
     5101 ccaaaacagc ggtgctgccg cgctcttggc tcatgcgggc gtgaacgtgc cgcaggtgaa
     5161 acagcgtttg cagcagcatt tgaacagcct gccgaaagtg tccggccagg gcggcgacat
     5221 tctgcccagc cgcgaattgc aggcggtgtt gaacctgatg gacaaagccg caaccaaacg
     5281 cggcgatgcc tatatcgcca gtgaactttt cctgcttgcc ttggtgcagc agaacgatgc
     5341 ggccggcaaa attttgaaag aagccggcgc gaccgaacaa aacatcaatg ccgcgattga
     5401 cgcggtacga ggaggacaaa acgtgaacga tgccaatgcc gaagaccaac gcgatgcttt
     5461 gaaaaaatat acgctcgatc tgacccaacg cgcccgagac ggtaagctcg accccgttat
     5521 cggccgtgac gacgaaatcc gccgtgcgat tcaggtattg caacgccgta ccaaaaacaa
     5581 ccctgtgctg attggcgaac cgggcgtggg taaaaccgcc atcgtcgaag gtttggcaca
     5641 acgcatcgtc aacggcgaag tacccgaatc cctgcgcaac aaacgcctac tggttttgga
     5701 cttggcggca ttgattgccg gcgcgaaata ccgcggcgaa tttgaagaac gcttgaaagg
     5761 cgtgttgaac gacttggcga aagacgacgg caacactctg attttcatcg acgaaatcca
     5821 tactttggtc ggcgcaggca aaaccgacgg tgcgatggat gcgggcaata tgctgaaacc
     5881 ggctttggca cgtggcgaat tgcactgtat cggcgcgacc accttggacg aataccgcca
     5941 atacatcgaa aaagacgcgg cactcgaacg ccgcttccaa aaagtattgg ttggcgagcc
     6001 aagtgtagaa gacaccatcg ctatcttgcg cggtttacag gagcgttatg aaatccacca
     6061 cggtatcgat attaccgacc ctgctatcgt tgccgcagcg gagttgagcg accgctacat
     6121 taccgaccgc ttcctgcctg ataaagcgat tgatttgatt gacgaagccg ccagccgtgt
     6181 caagatggaa aaagaaacca agccggaagc aatggacaaa atcgaccgcc gtctgattca
     6241 gcttcggatg gaaaaggcgc acgttgaaaa agaaaaagac gatgccagca aaaaacgttt
     6301 ggaactgata gatgaggaaa tcgacggttt ggaaaaagaa tacgccgatt tggacgaaat
     6361 ctggaaagcc gaaaaagcga tttcagacgg tgctgctaat attaagaaac aaattgacga
     6421 agtcaaaatt aaaatcgaac aggcaaaacg gcaaggcgat ttggcactgg cttcaaaatt
     6481 gatgtatgaa gatttggagc atttggaaaa acagcgtgca gccgccgaac gggcagatac
     6541 ggacagcaca aaaccggcaa acaaactctt gcgtaataat gtcggcgcag aggaaatcgc
     6601 agaagttgtt tcccgtatga ccggcattcc tgtgtcaaaa atgatggaag gcgaacgcga
     6661 caagttgctg aaaatggaag aagtgttgca ccgccgcgta gtcggtcaag acgaagccgt
     6721 gcgtgccgtg tccgacgcta tccgccgcag ccgttccggt cttgccgacc cgaataaacc
     6781 ctacggcagc ttcctgttcc taggcccgac cggcgtgggt aaaaccgagt tgtgtaaggc
     6841 attggcaggc ttcctgtttg acagtgaaga tcatctgatt cgtatcgata tgtccgaata
     6901 tatggaaaaa cacgccgttg cccgcctcat cggcgcgcct ccgggctatg tcggctacga
     6961 agaaggcggc tacctgaccg aacaagtccg ccgcaaaccg tacagcgtga ttcttttgga
     7021 cgaagtggaa aaagcccatc ccgacgtgtt caacatcctg ctgcaagtat tggatgacgg
     7081 tcgtttgacc gacgggcaag gcaggacggt agattttaaa aataccgtga ttgtgatgac
     7141 ttccaacatc ggcagccagc acatccaaca aatgggcatt caggattacg aagcggtaaa
     7201 agaagttgtg atggaggatg tgaaagaaca tttccgtcca gaaatgatca accgcatcga
     7261 cgaagtagtc gtgttccacg gactggatca ggcaaacatc cgcagcattg cgaaaatcca
     7321 gctcaaaggt ttggaaaaac gtttggaaaa acaaaacctg cgcctgactg tttccgatgc
     7381 cgcactggac atcatcgcca aagccggttt cgacccgatt tacggcgcac gtccgctcaa
     7441 acgcgccatc cagtcggaaa tcgaaaaccc gctggcaaaa gccctgcttg ccggaaacta
     7501 tgcgcccgaa agcgaaatca gggtagaagc cgacggcgac agactgaaat ttgcctgatt
     7561 cgttcctgct gttgaaaatg ccgtctgaaa cgggaatctc cgtttcagac ggcatttttt
     7621 atcctcggca gacaaaccgt ccccttattg gcggtaggtt tgcaggaatc ttgccagcct
     7681 gcccatcgcc tcttcaatct gatggacgta aggcagcgtg acaatgcgga aatggtcggg
     7741 cttgatccaa ttaaaccccg ttccctgcac cagcaagact ttttcgcgca ccagcaaatc
     7801 gtaaacgaat ttcatgtcat cgtggatacg gtacatttcg gtatcgattt ttgggaacat
     7861 atacatcgcg cccatcggtt tgacgcagga tacgccgggt atctgattga ccaattccca
     7921 cgccctgtta cgctgttcca aaagccgtcc gccgggcaaa atgaattcgt taatgctctg
     7981 ataaccgccc aatgccgtct gaatcgcatg ctgcatcggc gtattcgcac acaagcgcat
     8041 ggacgagagc atatccaaac cctcgatgta accttttgca tgatgtttcg gcccgttgag
     8101 caccatccag ccttggcgga atccggctac acggtaggct ttggacaaac cgttgaacgt
     8161 taccgtcaaa aggtcggggg cgagcgcggc gatgtggtgg tgaaccgcgc cgtcataaag
     8221 gattttatcg taaatctcgt cggcgaaaat aatcaaaccg tgcttgcgcg ccagttcggc
     8281 gatttccaac aggatttccc tgctgtacac cgcgcctgtc ggattattgg gattgatgac
     8341 gacgatggct ttagttttgg gcgtgatttt ggcttccata tcggcaaggt tggggaacca
     8401 gccgttttct tcgtcgcaca gataatggcg taccgtaccg cccgcaagcg ttgccgccgc
     8461 cgtccacaaa gggtagtcgg gcgcgggaat caggatttcg tcgccgtcgt tgagcaatgc
     8521 ctgcatagac atcgtaatca gctcggacac gccgttgccg atatagacat catcaaccgt
     8581 aatatcgcgc aaacctttgg tctgatagta gtgaacaatg gctttgcggg cggaatacag
     8641 ccctttggaa tcgcaatagc cttgcgaagt cggcaggttg cggatgacat cgaccaagat
     8701 ttcatcaggg gcttcaaagc cgaacggcgc agggttgccg atattgagtt taaggatttt
     8761 attgccctcc tcttccaact gaagggcttt tttgtgaacc ggcccgcgta tgtcgtaaca
     8821 gacgtgatcg agctttgcag acttgggaaa tttatccatg atgtgttccg taaattttgg
     8881 gcaatgggtg ggaatgtact ctttttcacg cggaatttaa agcatcaaac cgagattttc
     8941 aggcttttta cctgccctct ttgcgccgtt cgctgacgct tttgccgcct attccccagt
     9001 tatcggtatc cacttcgtca atcacgacaa ccgttgtttc gggattttta cccagcacgt
     9061 gtgccagcaa ttcggttacg ccgccgatca gttccgcttt ttgcgcggca gtcggtgctt
     9121 ccttgccgcc ggttacttta atattgacat aaggcatgat ctttctccgt tttgaaatat
     9181 tgctatctta tcaaacaagt tgcctccgcc caaacgtccg cttcattttc tgaaaaattc
     9241 aaatcgatat agcggattaa caaaaatcag gacaaggcgg cgaagccgaa gacagtacaa
     9301 atagcacgga accgattcac ttggtgcttc agcaccttag agaatcgttc tctttgagct
     9361 aaggcgagcc aacgccgtac tggtttttgt taatccacta tacaaaaaga cagttttcag
     9421 acagcaaatc cgtcttcaca cgatacctat tttgttataa cataacaaaa tctttaaccc
     9481 acacgagaca aaggctgcac catgaagaaa acattgacac tgctcgccgt ttccgcccta
     9541 tttgccacat ccgcccacgc ccaccgcgtc tgggtcgaaa ccgcccacac gcacggcggc
     9601 gaatacctta aagccgactt gggctacggc gaatttcccg aactcgaacc catcgccaaa
     9661 gaccgcctgc acatcttcag caaaccgatg cagctggtta ccgaaaaagg caaggaaaac
     9721 atgattcaac gcggcacata caactaccag taccgaagca accgtcccgt taaggacggc
     9781 agttacctcg tcatcgccga atatcagcct actttctggt caaaaaacaa agcaggctgg
     9841 aaacaggcgg gcatcaaaga aatgcctgac gcaagctatt gcgaacaaac ccgtatgttc
     9901 ggcaaaaaca tcgtcaacgt cggacacgaa agcgcggaca ccgccatcat caccaaaccg
     9961 gtcggacaaa acttggaaat cgtcccgctg gacaatcccg ccaacattca cgtaggcgaa
    10021 cgcttcaaag tccgcgttct gttccgtggc gaaccgctgc ccaatgccac cgttaccgcc
    10081 acctttgacg gcttcgacac cagcgaccgc agcaaaacgc acaaaaccga agcacaggct
    10141 ttctccgaca gcacagacga caaaggcgaa gtggacatca tccccttgcg ccaaggcttc
    10201 tggaaagcca atgtcgaaca caaagccgac ttccccgatc aaagcgtgtg ccaaaaacag
    10261 gcgaactact cgactttaac cttccaaatc ggccattcgc accattaatc ccgcccgcac
    10321 aaaaatgccg tctgaaggct tcagacggca ttttttgttc aaacatcaat accaaccgcg
    10381 cagtttcatc gctttttcaa cacggcggat actcatcata taagacgcgg ttcgcaaatc
    10441 gacatcgtat tcttgagcca agttccaaat atcgcggaac gctcggcgca ggacgacggt
    10501 ttctttctct tgaacttcgt caaactccca ataatagcct tgcaggtttt gcacccactc
    10561 gaaataggaa acgaccacgc cgccgcagtt cgccagaata tcaggcacga ccaatacgcc
    10621 gttttgacgc aggataacgt ctgcctctgg agtagtcggg ccatttgcgc cttcgaccac
    10681 gattgtcgcg cggactttac cggcattttc agaagtcagt tggttttcca gtgcgcaagg
    10741 ggcaagtacg tccacttcca gagccaaaag ttcggcattg ctgatttctt taccgtagcc
    10801 ggcttcattg gtgatgaaac ctttggtttg gaattctttg atgattgctt ccatatccaa
    10861 gccattttca ttgtagatgg caacgtcaac agtagaaacg gcaacgattt tcgcaccgga
    10921 ttgatgcgcg taataacctg tgtggtagcc gacattaccg aaaccttgaa tggcgtaagt
    10981 ggcacccttc acgtctttgc ccagtttttc caaagcttgg acggcagcga gattcacgcc
    11041 gtaaccggtg gcttcggtac gcgccaaaga gccgccgaac tcaaccggtt tgccggtaaa
    11101 tacgcccggt gcagaatgtt tcaccacgtt ttcataggca tcaaccatcc aagacatgat
    11161 tttgccgttg gtgttcacat caggtgcggg aatatcgatt ttctcgccaa tcagcggaga
    11221 aatggcttcg gaataagcgc gggcgatgcg ttccagttcc gcctcggaat aatcgcgcgg
    11281 atccaaggta acgccgcctt tgccgccgcc ataaggaata cccgcaacgc agcatttgat
    11341 ggtcatccaa atcgacaggg ctttgacttc gtccagattc acaccaggat gaaagcgcac
    11401 gccgccttta taggggccga cggcgttgtt gtgttgcgaa cggtagcccg tgaaggtttt
    11461 gaccgtgtcg tcgtcgagtt tgacggggaa attgacttcc aacacgcggg tcggactctt
    11521 caggatttca taaacggccg gatcggtttt cagccggtcg caggcggttt tgacctgttt
    11581 gcgcgcgatt tcaaacggat tgagggtttc ttttgcaagg gcttcagaca ttttgcttcc
    11641 ttttcacaaa aagattttca ggggcgtgca tttcgctcat tactataacc aatttcccga
    11701 caaaatgtaa tagcgtgtag tcggcataag cccgatttga ttaatctata tatgatttta
    11761 tttttcaagc cgcacggaat cagcccggac tccgcctgaa aaagcagcgc gcgcatccga
    11821 aaaataaatg tcaaattaaa taaagatata ggcatccttt tattttttaa aaatttaatt
    11881 ggaacatcgc cgggatttca aacccttgcc cgattccgcc ccgaaatccg aaaacaccgc
    11941 ctgcaaaacc tgttgcgatt gttaacaatc tatacattag aagccctgtg caaacgatgt
    12001 taaaataaac cctttcaacc cgacaggaaa tcagattatg aatgcagcca tcgaacacgt
    12061 ccaagccgtc gccttcgatt tggacggcac actgtgcgat tccgtccccg accttgccgc
    12121 cgccgcagaa gcgatgttgg aacaactcgg tatgaaaccg ctgcccgcca aagtggtcga
    12181 aagctatgtg ggcgacggca tcggcaaact ggttcaccgc gtcctctcca acgaccgcga
    12241 ccgcgaagcc gattccgaac tgtgggaaaa aggtttcgta tcctatatga aatactaccg
    12301 cgaccatttg agcgtcttca cccgccccta tcccgaaacc gaagccgggc tggcattgct
    12361 caaatctttg ggcatcccgc tggcagtcat taccaataaa aacgaaatcc ttgccgccga
    12421 actgttgaaa cagctcggac ttgccgacta cttcagcctg atactcggcg gcgacagcct
    12481 gcccgaaaaa aaacccagcc ccctgccgct gcggcacgcc gccgaagttt tgggtatcga
    12541 tgttgcaaac atggttatgg tcggcgactc gcgcaacgac atcatcgccg ccaaagccgc
    12601 cggctgcctg agcgtcggcg ttaccttcgg ttacggcgat atgacgctgc tctcgcaaga
    12661 cgatgcgacc cgccccgact ggattatcgg ctcgctgccc gaaatttacg aaaacctgca
    12721 accgcagaaa aataaagaag agtaggcatt cggacggcac gctatgccgt ctgaaacctg
    12781 ccgcacgccg aaactgccgc catgaaaccg caaaaatccc tacgcgcccg cgcgatggac
    12841 atcctctcgc gccaagaagt cagccgcatc ggtctgaaac gcaaacttgc accgcacgcc
    12901 gaaagcgaag aagagttgga aaacgtgtta aacgaatttg ccgaacgcaa ctggcagtcg
    12961 gatttgcgct atgccgaagc ctatatccgc agcaaaagcc gcaaacacgg ttcattgagg
    13021 ctgaaacagg ctttggcgca acagggcata gatgaagaaa ccagccgcaa cctgcttccc
    13081 gaccgctcaa gcgaaaaaca ggccgccata gacgtgttgc gtaaaaaatt caaacacccc
    13141 gccgccgacc ttaaagaaaa acaaaaacag gcgcgtttcc tcgcctatcg cggattcgat
    13201 gccgataccg ttcagacggc attgaaacac gcttgggacg aaaattggga agacggctgc
    13261 tgaccttcct tcttgaatct ttttgcacgg caacataacc ttacgcccgt ttccaacttt
    13321 tccgattgag aacaaaatgt ccgaacaacc cgaaaaacac cacacctccc ccatcgaaga
    13381 cgaacgcaaa aacccggttt accgtatggg acgggctgtt gccggattca tgctcgtcgt
    13441 ttgggcgggc gtattggcac tcgtgttttt cctggtcttc cgtttttggc tttcctaaac
    13501 aaaatgccgt ctgaaacctt cagacggcat cggcagccca tttcggcagg ctatcccatc
    13561 atagcttttt ttagcttgaa ttccactttc ccattcccta aaatttttcc acacccattt
    13621 caaaataccc tttcttaaaa caggtacact atgacacaac aacgccaact gccttcccac
    13681 gaactcatta tgtccgaact gatgatgccg gacaccgcca atttcagcgg caacgtacac
    13741 ggcggcgaac tcctgctcct gctcgaccag gttgcctatt cctgcgccag ccgttacagc
    13801 ggcaattatt gcgttaccct gtcggttgac aaagtcctgt ttaaagaacc catccacatc
    13861 ggcgatttgg ttacctttta cgccgctgtc aactacacgg gacgcacctc gatggaaatc
    13921 ggcatccgtg tcgaagcaca aaacatccgc accggcgaaa tccgccacac caacagctgc
    13981 tacttcacga tggttgcggt caaagacggc aaacccgtcc ctgtccctcc gctggaaatc
    14041 ctgaccgacc gccaacgctg ccgctacgaa aaagccaaaa aacgcagaga catcagcctg
    14101 caagcctctg aagacatgtc ctgcggctgc tgacggcgga ctatgccgtc tgaaagacag
    14161 gcacatcgcg ccatccgttt ctactgcaaa cggatgaaat caagcaaata cccaaacaca
    14221 gtcaaacaaa tttatatgcc ccgtcccttc cgaatgattt gaaaacacag ccgccaaaaa
    14281 caaaaatgcc gtctgaaaac ctttcagacg gcatttccaa cttgatttca ggcagaaagt
    14341 cagaacgcga tatagctgtt cgggttaacc ggtttgccgt tttgccgcac ctcgaaatga
    14401 agctgcgttc tggaagcgtc ggtattgccc atcaaagcga cctgctgccc gcgtttgacc
    14461 tgctggcctt cgccgaccag caatttttgg ttgtgcccgt atgcggtcag gaaggaagaa
    14521 ttatgctgga tgatgaccag attgccgtat cccctcaaac cggaacctgc ataaaccact
    14581 ttgccgtcag ccgccgccaa aacgggctgt cccgcattac cggcaatatc gacacccttg
    14641 ttgttgccgc cgaaatcggc aaccacttta ccttgcgtcg gacgctgcca aacaatgccg
    14701 ccgaccgaac gcgttccgga aggcgaagcg gcaggagatt gcggggcggg cgcgggaacc
    14761 gctttatttt ccgcagcggg cgcggcaggt tgcggcgcgg actgcacagg cggttgcgcg
    14821 gcgggtttca caggggtttg cacggcagcc ggtacggcgg gcctgctttc tacggctgcg
    14881 gttttcggtg cggcatatcc tgccggtttg actttaacaa tctgaccgat gctcaacata
    14941 ttgtcggtca tgccgttcca cgcacggaaa tcgtcttgag agatatggta gcgtttggaa
    15001 atgttgtaca ccgtgtcgcc gcgcacaata gtatgcgtcg ccgcgttaat gtcgacgggt
    15061 gcggactgta cgggcggttg cgcggcagcc ggtacggcgg gcctgctttt tacggctgcg
    15121 gttttcggtg cggcatatcc tgccggtttg actttaacaa tctgaccgat gctcaacgta
    15181 ttgtcggtca tgccgttcca cgcacgaaaa tcgtcttgag agatatggta gcgtttggaa
    15241 atgttgtaca ccgtgtcgcc gcgcacaata gtatgcgtcg ccgcgttgat gtcgacgggt
    15301 gcgtaagaag gaacgtatgt acccgaaacg gcaggtgcag acggcggaac ataagcagga
    15361 ggcgtataaa ccggcgcgct ttgcaccggc ggcacataag gcgcatcgcc ggcaggagcc
    15421 gggctgtacg gcgttgctcc ataggggttg ttgtaaactg ccgaagacgg cgcgtcctgc
    15481 atacctgaat tgcctgcaat gacgggggca ggctgctggg tagcacaacc gcccaacagt
    15541 gcggcaaagg aggcgcaagc cgccaaaagt gtcgtttgtt tcaacataag ataaccttca
    15601 tgttccgata tatagcctga atgcggtata tcataataaa aatgcgcgtt cttctcaagc
    15661 gcaaagcccg ac
//
LOCUS       DBBZYD010000048        14750 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.048, whole genome shotgun sequence.
ACCESSION   DBBZYD010000048 DBBZYD010000000
VERSION     DBBZYD010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14750
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.048"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            52..1005
                     /locus_tag="ACJJDL_001215"
     CDS             52..1005
                     /locus_tag="ACJJDL_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HGG7573937.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1116..1439)
                     /locus_tag="ACJJDL_001216"
     CDS             complement(1116..1439)
                     /locus_tag="ACJJDL_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573938.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1612..2973)
                     /locus_tag="ACJJDL_001217"
     CDS             complement(1612..2973)
                     /locus_tag="ACJJDL_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HGG7573939.1"
                     /translation="MLKKWLNKMLPSSRSSKEAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKEAGFQAYVVGGAIRDLLLGIEPKDFDVATDAMPEQVHKLFRRSRIVGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGT
                     DWE"
     gene            complement(3328..5028)
                     /gene="recJ"
                     /locus_tag="ACJJDL_001218"
     CDS             complement(3328..5028)
                     /gene="recJ"
                     /locus_tag="ACJJDL_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HGG7573940.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAAGRLADAVERKEKILIVADYDADGATACSVGMSGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMALRAELRRRNYFSDGIKEP
                     NLGELLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDAEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTFITDGSLPARDITLEQAQNLAKHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAA
                     "
     gene            complement(5097..5813)
                     /locus_tag="ACJJDL_001219"
     CDS             complement(5097..5813)
                     /locus_tag="ACJJDL_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573941.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDRPADIAKLKQLEFEAVELDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPVDIYYTVTEKHTDKSKLFGNILYTPPLLILDAA
                     GAVLALPAAALGAVVDAARK"
     gene            complement(5860..6366)
                     /gene="yjgA"
                     /locus_tag="ACJJDL_001220"
     CDS             complement(5860..6366)
                     /gene="yjgA"
                     /locus_tag="ACJJDL_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HGG7573942.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAIVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPNADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            6520..7851
                     /gene="pmbA"
                     /locus_tag="ACJJDL_001221"
     CDS             6520..7851
                     /gene="pmbA"
                     /locus_tag="ACJJDL_001221"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HGG7573943.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADACLMAKHIGDPDLYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            7863..8054
                     /locus_tag="ACJJDL_001222"
     CDS             7863..8054
                     /locus_tag="ACJJDL_001222"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573944.1"
                     /translation="MPSEDEGSTFCPVPARLPFYAAPPFADNIAHFFISTDFPLSVKI
                     LSHLSTTGYTQVQDKACGD"
     gene            complement(8148..8351)
                     /locus_tag="ACJJDL_001223"
     CDS             complement(8148..8351)
                     /locus_tag="ACJJDL_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HGG7573945.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8594..8896
                     /gene="clpS"
                     /locus_tag="ACJJDL_001224"
     CDS             8594..8896
                     /gene="clpS"
                     /locus_tag="ACJJDL_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HGG7573946.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8898..11189
                     /gene="clpA"
                     /locus_tag="ACJJDL_001225"
     CDS             8898..11189
                     /gene="clpA"
                     /locus_tag="ACJJDL_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HGG7573947.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(11229..14327)
                     /locus_tag="ACJJDL_001226"
     CDS             complement(11229..14327)
                     /locus_tag="ACJJDL_001226"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HGG7573948.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSKPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSTDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQRVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKKLSAAENRQALL
                     HPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKVATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNQEIDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEEYMNGYIDSQTG
                     EARRGYLDVAKELRERFPDPDEIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QNVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYNDIRDWLSRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEDLNETA
                     AKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGT
                     DI"
     gene            complement(14406..>14750)
                     /locus_tag="ACJJDL_001227"
     CDS             complement(14406..>14750)
                     /locus_tag="ACJJDL_001227"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7573949.1"
                     /translation="VNYISNQQLTNFTIKDEFKDALDINFAFYYFFIIAEQSKKLINT
                     SSLPIISMKELKKLKIPIPPLPEQEKIAAILDKFDILTHSISEGLPHEIALRRKQYEY
                     YREQLLAFPKAT"
BASE COUNT         3417 a         4169 c         3675 g         3489 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgt
      361 accaaacgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatctcgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggt tttctgcccg gtgacctgac ccagaaagtc
      601 gatccctacc ttcgtccgct ttatgatgcc ctctatgacc tgatgggctt tgaccgtgtc
      661 accaagctga ttgaaaaagg cctgattgaa atcgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 ggcgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctttg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa atcgggcaga gaaaaacaga tacggaagcc aagctccgta
     1081 tccgtatccg tttctttatc cgtccaaccg atacatcaat cgaattttct gcatcggatt
     1141 gcctcatctt cgcaaaacat tgccgaagtt tcgcggttgc acgcctgacg cactttctgc
     1201 cgcgccacgc cttcattccg atcgcttgcc tcaaacgtct tctgaaaagg cgtaacgctg
     1261 catacataca tggtggaatt tgaaccgaaa aggtcgattt tgacggtatt gctgccgctt
     1321 tccaatacgg cgacacggtg ttccaactgc gccagacgtg cttccaaatc gccgattctg
     1381 tcggcaaatg caggcatggc ggcacacgcg gtcaaaatgc ccaaaataca ttttttcatc
     1441 aatttttcct tgtttcttga accctgccca cccggacatc ctttttccga gaggcagggt
     1501 tagactttat ttacggggat gaatcccctt acaaatcagg ataatacata gaacggcact
     1561 ttatgcttca tcccatgtgt tgaaacttca ttgctccttg tctgttgacc cttattccca
     1621 atccgttccc acaaccttcg gcttgggttt gcgcctgcga cggcggcgtt ttttcgcctg
     1681 tccttcgttt ttttcgtgtc gggcggcggc ttcgtttttg gtcatctccg accgctgttc
     1741 cgtcgatgcc gtctgaaacg ccgtccacca ctcggcaagg gcgcggtccg cattgccggt
     1801 ttcggcgcgc aagagcagga aatcataggc ggcacggaaa cgcgcctgtg caaacagttt
     1861 gtgcggacgt gcgcctttgc ggttttcaaa ctgcggctgg aacatccaaa tttcgcgcat
     1921 cgtggcggaa aagcgttgcg gcacgcccca accgcgttcg acggtttcgc gcatcgtatt
     1981 gattgcatcg gacagggcgg gcgcgggttt caaaccctgt tgcagattgc ttttccaatg
     2041 gcgttccaac tcgggccaca tcagagccgc caatacaaaa ccgaccgaaa ccgatttgtc
     2101 ggcacgcagc cgctcatcgg tatttttcag ggcaagcacc gtcatttttc cggcgatgcc
     2161 gtctgaaaca cgcaaggcat tgagcagcgg atggatgtcg tccggtatgt caaatccgtt
     2221 caaacgtttc agacactcgc gcgcgtgccc tgaaaacagc agtttcatga tttcgtcaaa
     2281 cagcctcgct accggttcgt gcttcagacg gcatatcgat tcggcaatcg gtgcggtggt
     2341 ttcttccgac agctcaaagc ccaatttgcc cgacaggcgg atggcgcgca aaatcctgac
     2401 agggtcttcc tgatagcgtt cggcggcatc gccaatcata accagcctgc gggcggcaac
     2461 atcggcaatc ccgttgtgga aatccaaaat ctcttctttt tccggatcgt aatacaaggc
     2521 attgcaggta aaatcgcgcc gcatcgcatc ttcttcgatg ctgccgtagg tgttgtcctt
     2581 cataatcctg ccgtgcgcgt tctgatgaac tttcgcaccg ccgcgaaacg tcgttacttc
     2641 gataatctcc gcaccgttca tcacatggac gatttgaaaa cgcctgccga cgatgcggct
     2701 gcggcggaag agtttgtgca cctgttcggg catggcatcg gttgcgacat cgaaatcctt
     2761 gggttcgatg ccgagcagca ggtccctgat cgcgccgccg accacataag cctgaaaccc
     2821 tgcctctttc aggcggcgta tgacgttttc ggcggcaaag ctcaacattt cggcacggat
     2881 gttgtgtctt tcggcaggaa tgaccgtttt actttccgct tctttactgc tccgactgga
     2941 aggcagcatc ttattcaacc attttttcag cataaatatt ctgacccgaa gagcggcatc
     3001 tccacgggca accgtgttca gacggcatcg ggcgcaggtt tgcaagatgc cgtaaccata
     3061 aacaaaaggc gtagaaacta cgccgtccga atcacgccgc cctcgcggcg gcaacgcgtc
     3121 attataacag attgccctcc aaaaaaatca gaccctgctt ttgtggcaga gtctgaaatt
     3181 tgatgcacct tatatattgc gtccctaaga agggatgatt aacaaaaatt aacgcccttt
     3241 actttctttt ccgattggga acattcccgt cgtacaaaca ggcaaatgaa ggaacagaaa
     3301 tcacattcaa acggcgttcc gccgcctcta cgccgcttcc cagtagtcga tataaagctg
     3361 caattcgagg ttgttgcgcc attcgttggc aacggggcgg tacaccgtgc ggatgtattc
     3421 gggaatgtct tcgctgcacc gccagaacat tgcttcaaat tcgcagccgt ctttttgcag
     3481 ccacgctttt ttgtgtttgc cttccgcgcc caaaggctgc tggcggacga cgtggaactc
     3541 gtcggtaaaa ctcggcggcg cgaagccctg cccccaaacg tgtttagcaa ggttttgcgc
     3601 ctgttccagc gtaatgtcgc gtgcaggcag gctgccgtcg gtgatgaagg tttgcgacaa
     3661 atcgtcttcg cacaccattt cgcgcacggc ttcttcaaag gccgtctgaa acgcgggaat
     3721 gttgtgttcg agtatgctca agcccgccgc catcgcgtgt ccgccgaatt tcaaaatcaa
     3781 atcgggatgg cgtttggaca ccaagtccaa agcatcgcgc aagtgaagat tgggaatgga
     3841 acgccccgaa ccgcgcactt caccgttgtc ggcaggcgca aacacgatgg tcggacgata
     3901 aaaacggtct ttgaggcggc tggcaacgat gccgaccacg ccttgatgga agtcgtcgcg
     3961 atacgccacc aaagtcgtct gacctgaagg cagggtttca ggaaaagcat tcagcgcgtc
     4021 ttgcagcata gactgctcga tttcgcgacg ttcgatattg aggttgttta actgcgccgc
     4081 cagttcctgc gcctcggcat catctcgcgc caacagacag gcaataccga ccgacatatc
     4141 gtccagccgt ccggcggcgt tgatgcgcgg ccccaacgca aaacccatat caaacggctg
     4201 cgccttgcgc caatcgcgcc gcgccacttc aaacaaggcg cggataccgg ggcgcatttt
     4261 gccggagcgc atccgtttca aaccttgcga cacgaggatg cggttgttgt ggtcgagagg
     4321 gacgacatcg gcaaccgtgc cgagtgcgac caaatccaaa agttcgccca aattcggctc
     4381 tttgatgccg tctgaaaaat aattgcggcg gcgcaattcg gcacgcaacg ccatcaatac
     4441 ataaaaaatc acgcccacgc ccgccaagct tttgcttgga aaaccgcagc ctttttggtt
     4501 cggattgacg atgatgcagt cgggcacggt ctcggcaggc agatggtggt cggtaacgat
     4561 gacatccaaa cccagagcct gcgccctcgc cacacctgcg atgctggcga taccgttatc
     4621 aaccgtaatc agcaaatcca caccttgctc tgccgcgatt tcagccagct cgggcgttaa
     4681 gccgtagccg tgctcaaagc ggttgggcac aaggaaatcc actttcgccc ccatcgccgc
     4741 caaaccgctc ataccgacgg aacacgccgt cgcgccgtcg gcatcatagt cggcgacaat
     4801 caggattttt tccttgcgtt caaccgcatc cgccaaacgg ccggcggcgg cttcgcagtt
     4861 tgtcagcgtt tgataaggca ggagggaagc gagtttgtcg tccaattcgg caggactttg
     4921 cacaccgcgc gaggcacaaa gccgggcgat taaaggatcg gcaccggcgg tgagcaaatg
     4981 attaaaaacg tcggtattga cggatcgggt ttggattttg actgacatga cgaagttttt
     5041 tcaagatatg atgaggctga aatgccgtct gaaagctttt cagacggcat tgcttttcat
     5101 ttgcgggcgg catccacgac cgcgcccaga gccgccgcag gcaaagccag taccgcaccc
     5161 gccgcatcca gtatcaacaa ggggggcgta tataagatat ttccaaacag cttggatttg
     5221 tcggtatgtt tttcagtaac cgtgtaataa atatcgacag gcacactctg ttcaaaatgg
     5281 taatcggcgt tcagtttttg cggtgtggcg tagtatttgc ctttggcgga tacgcagcgc
     5341 gtgtaaatag tccgattgtc aagttcgacc gcttcaaact caagctgttt cagcttggcg
     5401 atgtcagcag gcctgtcggt atcgtagcgc aggcaaaggc cttcggtact gaaattctgg
     5461 ctgccaggcg attcgagttt gaccggcagg gcttggtggc gagcatagct cggggtatcc
     5521 tcaactattt ggaagggttt gtccaacccg gccttcaaaa tgcccgtcag cttcgccgaa
     5581 tcttcgggat tgacgacgaa ccagtatttc ccgcccatca tcaccagact gcccttttcc
     5641 aattgggcat tgtctttggc aaccacaccg aaggcgcgga tttgatcctt gtcaacgtgt
     5701 ttataggcgg tcgtttggct gaacgggtcg ttcatgcccc acatcattgc cgtacagccg
     5761 ttcaacatca aggctgccgc caaaacggcg gcggtcgttt tacggaacaa cattttatcc
     5821 tccaatctaa ataacggcgg atgtcgtctg aaaatatgcc taaatttccg cgtccccgtt
     5881 ttccataacg gttttcaact cttgaaacag ggcgcggaaa tttttcggcg gtttgttctg
     5941 ttcctgttct tttttggtat tgcggatgag cgtcctcagc ttgcccgcat cggcgtttgg
     6001 aaaatcggac ataaactgcg tcagcgcgcc gtcgtccgcc agcagctcca tccgcgtccg
     6061 ctccacacgt tgcaaaaagg cgttgtgcgc cgcatcgtcg ccgcgcagct tggcaagaaa
     6121 tgcctcgatg ggcgcgggat cggtatcgcg catcagtctg ccgataaatt gcgcctgccg
     6181 cttgagcgcg ccgttggatg tgattttttt ataggtaacg atggcttcgt acaaatcttc
     6241 gtccaagccg atttttttca acgtgtcgct tgagagcttg gtcagctcca tacccaaatc
     6301 ctgcaaaccg ttcatctgct ttttcatttg ggttttgctg acccattcgt cttcttgttc
     6361 aaacatcttc attctcaaat tttatccgac gggcgcattt taacagaatg attccgcgtt
     6421 cagacggcat tttgcaccgt ccgccctgca aacggacgct tttgcccctg ccgcccgaaa
     6481 cggttaaaat gccgcaacgc tccaccaaga aagatttcta tgctgttcaa ccacaccgct
     6541 tccgaacttc tcgacctctg ccgccgcacg ctcgacttgg caaaagcagc gggcgcgacc
     6601 gccgccgaag ccgatttcag cgaatccatc ggacaaagcg tcagcgtgcg gctgggcgaa
     6661 atcgaacaaa tcgagttcca gcaggacaag tcgctggaca ttaccgttta cgtcggcaaa
     6721 cgcaaaggcc gcgctggcac cgccgatttc tccgaacaag ccctgcgcga caccgtccgc
     6781 gccgccgccg acatcgcccg ccacaccgcc gaagacggtt gcgccggact tgccgatgcc
     6841 tgtctgatgg caaaacacat cggcgacccc gacctttacc acgaatggga tttggatacg
     6901 gaagccgccg tcggcttggc aaaacaatgc gaacaagccg ccctgaacga ggatgagcgc
     6961 atcgaaaact ccgaaggcgc ggcggtgcaa accggccatt accaatacgt ttacggcaac
     7021 acccacggtt ttgccgcaca ccggcaaggc acgcaccaca gcatttcctg cagcgtcgtt
     7081 gccgccgacg aaaacggcat gcagcgcgac tactggtacg attccgcctg ccgccatccg
     7141 gatatggaca gccccgaaac catcggtcaa accgccgccc gccgcacttt gcgccgactc
     7201 ggcagccgca gcatcccgac aggcagctac cccgtcctct tcgataccac cgtttcgggc
     7261 ggtcttatcg gacacctcgt cggcgcactc tccggcggtg cgctctaccg ccaaagcagt
     7321 ttcctgatcg acagcatcgg caaaaaagtc ctgcccgatt tcctcaacct gcgcgaagaa
     7381 ccgcacatcc cccgctcttt ccgcagcagc tattttgatg cggaaggcgt tgccaccgcg
     7441 ccgcgcttcg tgattcaaaa cggcattgtc gaaggctatt tcctcagcag ttacagcgcg
     7501 cgcaaactcg gtatgcagac cacgggcaac gccggcggcg cgcacaacct gtatttgaac
     7561 catacgcacg aaacgcaatc cgacctgctg aaagaaatgg ggacgggatt gttggtaacc
     7621 gaactgatgg gacagggcgc gaacaccatt accggtgact actcgcgcgg cgcggcgggt
     7681 ttttgggtgg aaaacggcgt gattgcctac cccgtccacg agattaccgt agccggacgc
     7741 ttgcaggata tgtaccgcga cattgtcggc gtggcggatg acgctttgcg gcgttcgtcc
     7801 aacaaaatcg gctcgattct gattgcgggg atgacggttg ccggaagctg aacgccctgc
     7861 cgatgccgtc tgaagacgaa ggcagcacgt tttgccccgt gcctgcccgt ttgccgtttt
     7921 atgccgcacc gccttttgcc gacaacattg cacatttttt catcagcact gattttccct
     7981 tatccgtcaa aatactaagc cacttgtcca caacagggta cacacaagtt caggataagg
     8041 cgtgcgggga ttagggtttt tccgccgccg gcaaaacggc agacaaaaac ggcgggacat
     8101 tgcctgtccc gccgttttca aatatacatt tgaccgtaca tcaggaatta agcagcctga
     8161 atgttggcgg cctgtttgcc tttagggccg gtggttacgt cgaaagagac gcgttggcct
     8221 tctttcaggg ttttgaaacc ttccatattg attgctgaga agtgagcgaa caaatcttcg
     8281 ccgccttcat caggagtgat gaaaccaaaa cctttagcgt cgttaaacca ttttacgata
     8341 ccggttgcca ttagaaactt cctatactca aaaattaaca aaatcagcaa aacaaggcat
     8401 acggcaaacc gagccgtcta gcgttccttc cagcttgata tactcggcgg atgcccaatc
     8461 ctgcttaacc gtctttttac atttgttaag acaaaacgtc aagctatgtt ttcaaaaaag
     8521 tgggaaaata ggcaaaagta ccgaaaatac aacaaaaatg ccgtctgaac gcggctttca
     8581 aatgggacac actatgaccg cgcaacacca atccgacacg ctcttgcacc gtctgaacac
     8641 cctgccgccg aaacgttacg gcgttttcct attgaacgac gattacacca cgatggaatt
     8701 tgtcgtcgaa atcctgaccg aaatctttat gctcggacaa gaacaggcgg tagcggtgat
     8761 gctcttggtt catcacgaag gcaaaggcct gtgcggcact tacacgcgcg atattgccca
     8821 aaccaaacaa caacaagtca tgcagcgggc aaaagccgaa gggcatccgc tgcaatgtat
     8881 tgtcgaggag atttaatatg cttgcacccg aattggaaca gattttgcag cagctttacc
     8941 gcgaggcgcg taaggctcat tatgaattta tcagcctcga gcatctgctt ttggtactca
     9001 tcgaagaaga tgcctccgtg ccgaacgtct taaaactctg cggcgcggat ttgaaagtgg
     9061 tgtccgaaca gctcgccgcc agcgttgccg aaaacacccc cctgattccc gaacaccttt
     9121 tagacacggt cgaaacccgg cccacgctcg gcttccaacg cgtgatgcaa cgggcgatgg
     9181 tgcataccca gtctgccgga aaagccgcag tcgaaccgtt ggacgttttg gtcgcgctga
     9241 tgagcgaaac cgacagccac accgtctatt tcctcaagct gcaatcggtt acgcgttttg
     9301 aagttttgcg ctgtattgcc cacggctctc ccgatgaaga tgaagacgat ggcaactatt
     9361 cttcagacgg catggacgac gataatgaaa accgcaccaa accgggcaaa aaccctttat
     9421 cggcgtacac cgtcaacctc aacgccgaag tcaaagccgg ccgtatcgac cctttgattg
     9481 gtcgcaaaca cgaaatggaa cggctggtgc aaatcctatg ccgccgccgc aaaaacaatc
     9541 cgcttttggt cggcgaagcg ggcgtgggca aaaccgcgct ggcggaaggt ttggcacatc
     9601 aaatcgtcaa cggcggcatt ccagacgcgc tcaaagatgc cgaagtgtac gcgctggata
     9661 tgggctcgct gttggcgggc acgaaatacc gcggcgactt tgaagcgcgg gtcaaatccg
     9721 tcttgaaaca gctcgaaaaa atcccgcacg ccattttgtt tatcgacgaa atccacacca
     9781 tcatcggcgc aggcagcacc agcggcggca ccatggacgc gtccaacctg ctcaaacccg
     9841 cgctggcaaa aggttcgctg cgctgcatcg gcgcgaccac ttacgacgaa taccgcacca
     9901 ttttcgacaa agaccacgcc ttaagccgcc gcttccaaaa aatcgacgtg gtcgaaccca
     9961 ccgtttccga aaccgtacaa atcctgcgcg gcttgaagcc gatgtttgaa gccttccacc
    10021 aagtccgcta tacgcaaggc gcactcgaag ccgccgccga actctccgca cgctacatca
    10081 acgagcgttt cctgcccgac aaagccatcg acgtgatgga cgaagcaggc gcggcgcaac
    10141 ggattctgcc caaatccaaa cagaaaaaag tcatcggcaa agcacaaatt gaaaccgtca
    10201 tcgccaaagt tgcgcggatt cccgaaaaaa ccgtgtcgca cgacgacaaa caagtgctgc
    10261 aattcctcgg tcgcgatttg aaaaacatgg tttacggtca agaaaacgcc atcgacgcgc
    10321 tggttgccgc cgtcaaaatg tcgcgttccg gccttgccct gcccgacaaa ccgataggca
    10381 gcttcctctt ctccggcccg accggcgtgg gcaaaaccga agccgccaaa cagcttgcct
    10441 actcgctggg cgtaccgctg caacgctttg atatgtccga atacatggaa cgccatgccg
    10501 tatcgcgcct catcggcgcg ccaccgggct acgtcggctt tgaacaaggc ggccttttga
    10561 ccgaagccgt caacaaacag ccgcattgcg tattgctctt ggacgaaatc gaaaaagccc
    10621 accccgacat tttcaacgtc ctcctgcaag tcatggacgc aggcaaactg accgacaaca
    10681 acggcaagag tgccgatttc cgcaacgtca tcctgattat gaccaccaac gcaggcgcgg
    10741 aaagcctcag ccgccccagc ctcggcttta ccgccaagcg cgaacgcggc gacgaaatgc
    10801 aggcaatcaa caagctcttc acgcccgagt tccgcaaccg cttggacgcg attatcccgt
    10861 ttgcaccctt gtccgaaccc atcatcgtca aagtcgtgga caaattcctg ctccagctcg
    10921 aacaccagct cctcgacaaa aaagtcgaag ccgaattcac gtcggcattg cacaaatatc
    10981 tggcggaaaa aggtttcgac ccgcaaatgg gcgcgcgccc gatgcaccgc ctgattcagg
    11041 aaaaaatccg caaaccgctc gccgacgaac tcctgttcgg caaactatcc gacggcggct
    11101 tcgtgcggat agactgggat gcggcaaaag aagaagccgt gttgaagttt aagaaaagca
    11161 aggtcaaaat aaaaaccgcc tccgcataaa atcaaaaatg ccgtctgaaa ggttcagacg
    11221 gcattttgtc aaatatcggt ccctattccg gcaaacttct ccacaaacgc cgcaatcttt
    11281 tgaaaaacac tttgtttctt cgtcagatat tgcgggttga gcggactcat tttcggcagg
    11341 gtttcggtca gttccgtacc gttttcgctg gcatagccgc gtttgagcga gccggtcaaa
    11401 tagcgtttgg cggcggtttc gttcaggtct tcggcggcaa tcaatcctgc cgcttcgtgc
    11461 cgcattacct cttgcgcgta ggtgtaaaag gtttccagta tggcgggaac gtcggggact
    11521 ttatccaaat ccgtatcgtt gataaaatcc acaatcagac cctctttggc gcggtggccg
    11581 atgctggcgc ggatgatgcg gcggatttct tccaccagct ccgcttttcc tttgattttt
    11641 ttgtgatgct cgaaaaccag ttgcaagatg taatccaaat tgatttcctg cgatttgagc
    11701 aaatccacct caaaaaccac atcgtcccaa tcgatttttg actgttcttt ctgttcgcct
    11761 gctttttggc ggctcagcca gtctcggatg tcgttgtagg cggaacggta gtcctgcacc
    11821 gccctttcag acggcatcgg cacttgccgc atttcctgca cgtcttcatc gctcaggtag
    11881 tatttttcct gaaacgcctt catcgcatct tcgtccgccg catccacatt ctgcaactcg
    11941 cgcagcgcgg caaattcatc gtagttctgc aatacgtttt ccgcccgcag gtattcgccg
    12001 aagagtttgg caaaatcttt tttgtctttt tccgtttcga tttcgtcggg atcggggaaa
    12061 cgttcgcgca attcttttgc cacatccaaa tagccgcgcc gcgcttcgcc ggtctggctg
    12121 tcgatatagc cgttcatgta ttcttcgtag cttttttcca gcaccacgtt tttggtgttt
    12181 ttgtcgccga acagggtaat cgcatcaatg gtcgcctgct ccaaatcgcg gaagcagaca
    12241 atattgccga aggttttggt ggcatcgtaa atgcggttgg tgcgagaaaa cgcctgcatc
    12301 aggccgtgat agcgcaggtt tttatcgaca aacagcgtgt tcagcgtcgg cgcgtcaaaa
    12361 cccgtcaaaa acatgccgac cacaatcagc aaatctattt cctgattttt cacccgtttt
    12421 gccaaatcgc ggtagtagtt ctgaaaggct ttgctgtccg tgccgaaatt ggttttgaaa
    12481 caggcgttgt aatcgttgat ggcagcctgc aaaaattctt tcgcgctgct gtccatcgct
    12541 tccggttcaa aggtttcatc gacaatttca ccgacggcgt tctgctcttc gttggcagca
    12601 aaggaaaaaa tagtggccac tttcaacggg tgcaggctgc ctgcctgttg cgttttgaac
    12661 gcttcgtaat agcacttcgc cgcatccacg ctgctgacgg caaacatcgc gttaaagcct
    12721 ttgccgcccg cattcagccg gtgcgttttc tgcctgaact ggttcaggat atattgcgtg
    12781 atttcgcgga tgcgttcggg gtgcagcagg gcttggcggt tttcggcggc actcagtttc
    12841 ttctcgtcct gttccgcttc cacggctttg aactgcgggc gcacatcgtt gtaatccact
    12901 ttgaatttca atactttttc atcgcggatg gcatcggtaa tcacataaga atgcagctcc
    12961 cgcccgaaca cgcccgccgt ggtttccgcg cccaaagcgt tttcgggaaa aatcggcgtg
    13021 ccggtaaaac cgaactggca gaatttttta aatttctttt tcaggttttt ttgcgcttcg
    13081 ccgaattgcg agcggtggca ttcgtcgaaa ataaagacaa cccgctgatg gtaaaccggc
    13141 agattatctt cacttttcat caggttgttc agcttttgga tggtggtaac gatgattttg
    13201 ttgtcgtctt tttccaaatt gcgtttcaag cccgccgtgc tttccgaacc gttcacgctg
    13261 tcggtcgaaa aacgttggta ttccttcatc gtctgatagt ccaaatcctt cctgtccacc
    13321 acgaagaaaa ccttgtcgat aaatgccgat tccgtcgcca gacgcgccgc cttaaagctg
    13381 gtcagcgttt tgccgctgcc cgtggtgtgc caaacatagc cgccgctctc cggcttgctc
    13441 caattcttcg cctgcgccga gctgttgatt ttccacagaa tgcgttcggc ggcggcaatc
    13501 tggtacggcc gcataatcag cagcgtatca ttcgcatcga acacgctgta atgcagcaaa
    13561 acgctcagca atacgctttt ttgcaggaac gtggcggtaa agtctttcaa atccttaatc
    13621 ggatgattgt ccgaccgcgc ccaattcatc gtgaaatcga agctgttttt gtcgcgcttg
    13681 gtggtgttgg cgaaatagcg cgtgtccgtg ccgttggaaa tcacgaagat ttgcaggaat
    13741 ttgaacagcg aattttcgct gttgaagctc tctttgctgt aacggtgcac ctgattgaat
    13801 gcttcgcgca ccgccacacc gcgctttttc aattcaatct gcaccagcgg cagaccgttt
    13861 accaacacgg taacgtcata acggtttgca tgcgtgcccg tctgctcaaa ctggttgata
    13921 agctgcacat ggttgcgggc aaggtttttc ttgtccagca gataaatgtt tttcagacgg
    13981 ccgtcatcaa aagcgaaatc gtaaatatgg tcgtcgtgga ttttgcgggt tttatcggta
    14041 atattttcag acggtctgtc cagatattcc gtcaaaaacc gcgcccattc gccgtctgaa
    14101 aacgccacat cgttcagccg ctgcaactgc gcgcgcaggt tttccagcag cctgctttgg
    14161 ctgttcaaat ccttgcggta ttcgtaaccc tgattctgca aatcggcgat taactccgct
    14221 tccaaccggt tttccgattg gtagctgccc gactgttcga ttttttcata ttggtcgagc
    14281 acgatgaaat tcggcgtttc ggcgatgggt ttggtttcga ggttcatggg tcgtcctttg
    14341 cagtatcggg ttttaaacgg tttgatgttc ggattgggct gcctgaaaat gtgcaggctg
    14401 ctttttcagg tagccttagg gaaggcaagc agctgttcgc ggtaatattc gtattgtttg
    14461 cggcgcaggg cgatttcgtg cggcaggcct tcgctgatag agtgggtcag gatatcgaat
    14521 ttgtctagga tggcggcaat tttttcctgt tcggggagtg gtgggatggg gatttttaat
    14581 ttctttaatt ctttcatgct aataataggt aaacttgaag tattaataag ttttttgctc
    14641 tgctccgcaa taatgaaaaa ataatagaaa gcgaaattta tatctaaagc atccttaaat
    14701 tcatctttaa ttgtaaaatt ggtcagttgt tggttactaa tataattaac
//
LOCUS       DBBZYD010000049        14391 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.049, whole genome shotgun sequence.
ACCESSION   DBBZYD010000049 DBBZYD010000000
VERSION     DBBZYD010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14391
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.049"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            25..1194
                     /locus_tag="ACJJDL_001228"
     CDS             25..1194
                     /locus_tag="ACJJDL_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6716 putative glycosyltransferase"
                     /protein_id="HGG7573950.1"
                     /translation="MNKKRVLLIASYDSFLNTGYAVAKEINYSTIDIYIHQTKKNILS
                     ESQLSLNGLSLKEINFFHIDDYFDKLMYQNYDIVILSLGNGLLTRFFRNSSKLNLTLP
                     IVITLFPGVIFGDSESIITRLGANILLFNNYYDYQIGNKFKERYNLSCTNILYGYPIL
                     RKKHHCSDGNKVYFIDQVKIPDGKKERLLILKKLIALANRYPHKDLVLLLRVHQNDIT
                     VHEDKYSYAELAKNMKLPDNFKIERKRTQDALQEMGYCLSFSSTMLFEAESCGIPIGV
                     ISDLGVDKKYANTHFKDSGVLVNLDTVDLDSPNTINPTWAELYTNPDSLSSKEFNQLL
                     EVTSTQPPSFDNYFIAVNDVQPVSMVLLRKFKKLIYHPKQFFVDSKLYKLIKFTK"
     gene            1242..2104
                     /gene="galU"
                     /locus_tag="ACJJDL_001229"
                     /pseudo
     CDS             1242..2104
                     /gene="galU"
                     /locus_tag="ACJJDL_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248199.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
     gene            2187..3203
                     /gene="galE"
                     /locus_tag="ACJJDL_001230"
     CDS             2187..3203
                     /gene="galE"
                     /locus_tag="ACJJDL_001230"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HGG7573951.1"
                     /translation="MNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL
                     KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPIKYYDNNVS
                     GSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL
                     TDIQKADPRWSMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVF
                     GDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAF
                     EAASGLTIPFEIKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMMEDSWRWVSNHPN
                     GYDD"
     gene            3299..4360
                     /gene="rffG"
                     /locus_tag="ACJJDL_001231"
     CDS             3299..4360
                     /gene="rffG"
                     /locus_tag="ACJJDL_001231"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HGG7573952.1"
                     /translation="MKKILVTGGAGFIGSAVVRHIINDTQDAVVNVDKLTYAGNLESL
                     ESLANHPRYAFEQVDICDRAALDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWHDMPSEKKAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLEELVPN
                     KPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVEWYLNN
                     QTWWSRVLDGSYNRERLGS"
     gene            4573..5448
                     /gene="rfbA"
                     /locus_tag="ACJJDL_001232"
     CDS             4573..5448
                     /gene="rfbA"
                     /locus_tag="ACJJDL_001232"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HGG7573953.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            5503..6042
                     /gene="rfbC"
                     /locus_tag="ACJJDL_001233"
     CDS             5503..6042
                     /gene="rfbC"
                     /locus_tag="ACJJDL_001233"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HGG7573954.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            6204..8252
                     /locus_tag="ACJJDL_001234"
     CDS             6204..8252
                     /locus_tag="ACJJDL_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HGG7573955.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPEINRL
                     VQTQRRATRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNAEAPSRLEHILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGNSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYH
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQY
                     ADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK
                     "
     gene            8389..9648
                     /locus_tag="ACJJDL_001235"
     CDS             8389..9648
                     /locus_tag="ACJJDL_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HGG7573956.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            10015..11421
                     /locus_tag="ACJJDL_001236"
     CDS             10015..11421
                     /locus_tag="ACJJDL_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG7573957.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAETQAHAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            11639..12853
                     /gene="gltS"
                     /locus_tag="ACJJDL_001237"
     CDS             11639..12853
                     /gene="gltS"
                     /locus_tag="ACJJDL_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HGG7573958.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            12952..13968
                     /locus_tag="ACJJDL_001238"
     CDS             12952..13968
                     /locus_tag="ACJJDL_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HGG7573959.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSAALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            13979..14176
                     /locus_tag="ACJJDL_001239"
     CDS             13979..14176
                     /locus_tag="ACJJDL_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573960.1"
                     /translation="MTTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            14194..14343
                     /locus_tag="ACJJDL_001240"
     CDS             14194..14343
                     /locus_tag="ACJJDL_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573961.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFLCVSYADVPTHRTIQKAS
                     PYVPS"
BASE COUNT         3835 a         3618 c         3321 g         3617 t
ORIGIN      
        1 ttaatatcta atatttaaaa tacaatgaat aaaaaacgag tcctattaat tgctagttat
       61 gattcttttt tgaatactgg atatgctgtt gcaaaagaaa ttaactattc aacaatcgat
      121 atttatatcc accaaacaaa aaaaaatatt ctttcggaat cacaattaag tttaaatggg
      181 ctttctttaa aagaaatcaa tttttttcat attgatgatt atttcgacaa attaatgtac
      241 cagaattatg atattgttat tctatcatta ggtaatggtt tactgacgcg tttttttcgg
      301 aatagtagca aacttaattt aacattacct atagtaatta ctctatttcc aggggtaatt
      361 tttggtgatt cagaaagtat tataactagg ttaggtgcta atattttatt gttcaataat
      421 tattatgatt accaaatagg caataagttc aaagaacgtt acaacttatc gtgtacaaat
      481 attttatatg gttatcctat cctacgaaaa aaacaccatt gctctgatgg caataaagtt
      541 tatttcattg atcaagtaaa aattccagat ggaaaaaaag aaagattatt aattctaaaa
      601 aaattaatag cactggctaa tcgctatcca cataaagatt tagtactatt attacgtgtc
      661 catcaaaatg atatcacagt acatgaagat aaatactctt atgctgaatt agcaaaaaat
      721 atgaaattgc ctgataattt taaaatagag agaaaacgga cacaagatgc cttacaagaa
      781 atgggatatt gtttatcatt ctcttcaaca atgttatttg aagctgaaag ctgcggaatt
      841 cctattggtg tcattagtga tttaggggtt gacaagaaat atgccaatac acatttcaaa
      901 gatagtggtg ttttggttaa tttagatacg gtagacttgg actctccaaa taccattaat
      961 ccaacttggg ctgaactata tactaatcca gatagcctct cttcaaaaga gtttaaccaa
     1021 ttattagagg ttacttctac tcaaccacct agttttgata attattttat tgcagttaat
     1081 gacgttcagc ctgtatctat ggttctgtta cgtaaattta aaaagcttat atatcatcct
     1141 aagcaattct ttgttgattc aaaactatat aaattaatta aatttactaa ataattttta
     1201 ctatgggttg ccttatttat ttcaaaggag tgacataaaa aatgcaaaaa attcgtaaag
     1261 ctgtattccc tgtagctggc atgggaaccc gattcttacc tgccacgaaa gccagcgcta
     1321 aagaaatgct gccaatcgtg gacaaaccgt taattcaata tgctgcggaa gaagccgttg
     1381 ccgcgggttg tactgaattg atttttatca ccggccgtaa taagcgtaat attgaagacc
     1441 acttcgataa agcctatgag ttggaaactg aactggaaat gcgtgaaaag cataaattgc
     1501 ttggctatgt gcaaaaaatt ctgcctgatc atgtcagctg tattttcatt cgtcaggcag
     1561 aagctttggg cttgggtcat gcggtattat gcgcccgtcc tgctgtcggt aatgagcctt
     1621 ttgccgtgat tttggccgat gacttgattg atgcaccaca aggcgcactc aagcagatgg
     1681 tagatattta caatcaaagc ggcaacagca ttttaggggt agaaacagtc gatccttcgc
     1741 aaaccggttc atacggcatt gtcgaagtgg aacagctgaa aagctatcag cgtgtaacaa
     1801 tattgtggaa aaaccaaagc ctgaagatgc gccgtcaaat ttagcggtag tcggccgtta
     1861 tattttgaca ccgcgtattt ttgatttgct gactaatcta cctcgtggtg caggtggtga
     1921 aatccagcta actgatggta ttgcccgcct acttgaccat gaatttgtct tggcgcatgc
     1981 gtttgaaggt aagcgttatg attgtggcag taagttgggc tatctggaag ccacggtagc
     2041 ttatggcttg aagcatcccg aattaaaaga tgatttcaaa gaattattga agcaatttgt
     2101 ataattttaa ggccgtctga aaaagaaaag gcatcatgtt ttttacactt tcaggcggcc
     2161 ttttaaacat aaagaaggaa aacgtgatga acattctcgt taccggcggc accggtttta
     2221 tcggctcgca caccgttgtt tctttgctga aaagcggtca tcaagtcgtg attttggata
     2281 acctatgcaa ttccagcatc aatatcctgc cacgcttgaa aacgattacc ggccaagaga
     2341 ttccgtttta tcaaggcgat atccgcgatc gtgagatttt gcgccgtatt tttgcggaaa
     2401 accgcattga ttcggtgatt cattttgccg gcttgaaagc ggtgggtgaa agtgtggccg
     2461 agccgataaa atattatgat aataatgttt ccggcagctt ggtgttggcg gaagaaatgg
     2521 cgcgtgcggg cgtgtttagc attgtgttca gttcttcggc gacggtttat ggcgatccgg
     2581 gcaaagtgcc ttataccgag gatatgccac cgggcgacac caccagccct tacggcgcat
     2641 cgaaatcgat ggttgagcgc attctcactg acattcaaaa agccgatccg cgctggagca
     2701 tgattttgtt gcgttatttc aatccgattg gcgcgcatga aagcggtttg attggcgagc
     2761 agccaaacgg tatcccaaat aatttgttgc cttatatctg ccaagtggcg gcaggcaaac
     2821 tgccgcaatt agcggtattc ggtgatgact accctacccc tgatggcacg ggtatgcgcg
     2881 actatattca tgtgatggat ttggcagaag gccatgtcgc ggctatgcag gcgaaaagca
     2941 atgtagcagg cacgcatttg ttgaacttag gttccggccg cgcttcttcg gtattggaaa
     3001 tcatccgcgc atttgaagcg gcttcgggtt taaccattcc atttgaaatc aaaccgcgcc
     3061 gcgccggtga tttggcgtgc ttctatgccg acccttctta tacgaaggcg caaatcggct
     3121 ggcaaacgca gcgtgattta acccaaatga tggaagattc atggcgctgg gtaagtaatc
     3181 atccgaatgg ttatgatgat taagtcatga aattgagagg ccgtctgaag tttcagacgg
     3241 cctttgtttg cgatttatag taaaatttac cttatcattt tggcgattaa tattcatcat
     3301 gaaaaaaatc cttgtcaccg gcggtgccgg ttttatcggt tcggcggttg tacgccatat
     3361 catcaacgat acgcaagatg cggtggtgaa tgtggataag ctcacgtatg cgggcaattt
     3421 ggaatcgctg gaatctttgg ccaatcatcc gcgctatgcg tttgagcaag tcgatatttg
     3481 cgaccgcgcg gcactggatc gtgtgtttgc cgaacaccag ccggatgcgg tgatgcactt
     3541 ggcagcagaa agccatgttg accgcagtat tgatggccca gcggcattta ttgaaaccaa
     3601 tattgttggt acttacacgc ttttggaagc ggcgcgcgcg tattggcatg atatgccgtc
     3661 tgaaaaaaaa gcggctttcc gtttccatca tatttcgact gatgaagtgt atggcgattt
     3721 gcacggcacg gatgatttgt ttaccgaaac cacgccttac gccccttcca gtccttattc
     3781 ggcttccaaa gcctccagcg accatttggt gcgcgcatgg ctgcgtactt acggcctgcc
     3841 gaccattgtg accaattgtt ctaataacta cggcccttat cattttcctg aaaaactgat
     3901 tccactgatg attctgaatg cgcttgatgg caaaccgctg ccggtgtatg gcgacggtat
     3961 gcagattcgt gattggctgt ttgttgaaga tcatgcgcgt gcgctgtatc aagtggtcac
     4021 agaaggcgaa atcggcgaaa cttacaacat tggtggccac aatgaaaaag ccaatattga
     4081 agtggtgcgc accatttgcg ccctgctgga agaattggtg ccgaacaaac cgcaaggcgt
     4141 ggcgcgttat gaagatttga ttacctatgt caaagaccgc cccggccatg atgtgcgcta
     4201 tgcgattgat gccgcaaaaa tcggccgtga gttgggttgg cagccgcaag aaacttttga
     4261 aagcggcatc cgcaaaacag tggaatggta tttaaacaat caaacttggt ggtcgcgcgt
     4321 gttagacggc agctacaatc gtgaacgctt aggcagttaa atagagacct ttgcaaactc
     4381 cccatctttg gcacatttct tcgttatgcg ctgctcgaaa gcttgcctat ctttgtgata
     4441 tgtctgcgct ttctgcgctg ctataacttc gaactgtact caaatctgtg gctttgcaaa
     4501 ggcctcaaat aataaaaata cgttcagacg gcatgaaggc cgcctgaaaa actacataag
     4561 gaaagtaaac tgatgaaagg cattattctc gcaggcggca gcggtatccg cctttacccg
     4621 attacccgcg gcgtatcaaa gcaattacta ccggtgtaca acaaaccgat gatttattac
     4681 cccttgtcgg tgttgatgtt ggccggaatc cgcgatgtgc tggtgattac cacccccgaa
     4741 gacaacgatg ctttccgccg cttactgggt gatggcagcg atttcggtat tcaaatttcc
     4801 tacgccatcc aacccagccc cgatggtttg gcgcaagcct ttttaattgg tgaagaattt
     4861 atcggcgatg attcggtgtg tttggtgttg ggcgacaata ttttctatgg ccagcatttc
     4921 agccaatccc tgaaagaagc cgccgcttcc gtggaaacca aaggtgctac cgtattcggc
     4981 tatcaagtga aagatcccga gcgtttcggt gtgattgagt ttgatgagaa tttcaaagcc
     5041 ctgtcaatcg aagaaaaacc gaaacaacct aaatccgatt gggcggtaac cggcctctat
     5101 ttctacgata atcgcgtagt cgagtttgcc aaacaagtga agccgtctga acgcggcgaa
     5161 ttggaaatta ccaccttgaa tcaaatgtat ttggacgatg gttcgctcaa tgtccaattg
     5221 ctcggtcgcg gtttcgcatg gcttgatacc ggcacacacg ccagcctgtt ggaagcagcc
     5281 tcgtttgtcg aaaccattga aaacattcaa aacctacaag tcgcctgttt ggaagaaatc
     5341 gcatggcgta atggctggtt gagcagcgaa gaaatcagaa acttggcaaa gccaatgtgt
     5401 aaaaatgaat atggccgcta tttattgcgc ttggttggca aagattaaga ggttgctttt
     5461 accagttttc aggccgtctg aaacgctttt taggaaaaca tgatgaatat catcgatacc
     5521 cgcattcccg atgtcaaatt gctcgaaccc aaagtcttcg gtgacgagcg tggttttttt
     5581 atggaaacct tccgtgatga atggttccgc caaaatgtag ccgagcgcac tttcgtgcag
     5641 gaaaaccaca gcaaatccac ccaaggcgta ttacgcggtt tacattatca aaccgaaaat
     5701 acacaaggca aactggtgcg cgtggtatca ggcgaagtct ttgatgttgc cgtggatatg
     5761 cgtcgtgata gtcctacttt cggccactgg gtcggtgagg ttttatcggc agacaacaaa
     5821 cgccaattat gggtgccgga agggtttgcc catggatttt atgtgttgag cgatgaagcg
     5881 gaattcgtct acaaatgcac cgactattac aacccgaatg cggaacattc cctaatttgg
     5941 aatgatgcca cagtgggaat cgactggcct ttattgggag aaccaagcct atcggccaag
     6001 gatttggcag gcaagatgct tgctgaagcg gccacatttt aattttcact tttaggtcat
     6061 cgtgggtaat ttgtagcaag atgacctaat ttttaccagc tagcctacta actaaatttc
     6121 tactatattt aaatagtcag aaaatttaca caaaatctgt taataagata ttatattgtc
     6181 agtaatattt tttcctattt attgtgattc ctgcctacat tcctcttcgc tctttcggta
     6241 tacgtaaaat tccgaatatt acgcaatttc taccggaata ttcacttaac aaaaccgtat
     6301 tcaacgccca aaccatcatt ggctggggct tacgcccgac cacccaccaa gcacgtgctt
     6361 ttgcacaatc acatggcttg ccgtttgtag ccttggaaga cggtttttta cgctcactgg
     6421 gcttaggcgt ggccggttat ccgcccttcg cactggttta cgacgatatc ggcatctatt
     6481 acgacacaac ccgcccatcg cgtttggagc agttgatttt agccgcaaac atgccgtctg
     6541 aaatgcttaa ccaagcgcag caggccattg atttgatttt gacgcaccgt ttgtctaaat
     6601 ataaccatgc tctggatttt tcagacggcc tcgtacaaga cagcaaaaac attgttttgg
     6661 taattgatca aactttcggc gatatggcga ttcaatatgg cggcgcagat gaagccacat
     6721 tccgccaaat gtttcagacg gccttagccg aaaatcctga tgcggaaatc tgggtcaaaa
     6781 cccatcccga tgtattgagc ggcaagaaac agggttacct tactgatttg gcacagcagc
     6841 cgcgtgtgcg tttattggct gaagacatta atccgatttc gctgctgcaa gcggtggaca
     6901 aagtgtattg cgtgacctcg caaatgggtt ttgaagcctt gttgtgcggc aagcctttgg
     6961 taacgtttgg tttgccgtgg tatgccggct ggggtgtaag cgacgaccgc catcctgaaa
     7021 tcaaccgcct tgttcaaacc caacgccgcg ccacccgcaa cttgctgcag ctcttcgccg
     7081 cagcctatct gcaatacagc cgctacctca accccaatac cggcgaagca ggcagcctct
     7141 ttgatgtcat cgactatctg gcgacggtca aacgtaaaaa cgacaaattg cgtggcgagt
     7201 tatattgcgt cggtatgtct ttgtggaaac gcgcggttgc caaaccgttc tttaacgtac
     7261 cctcttgccg tctgaaattt atctcttcca cccaaaaact ggcaagggtc aaactgtccg
     7321 acgatgcacg catcctggct tggggcaacg gcaaagaggc catcgtccgc tttgccgaac
     7381 aacaccacat ccccctgctg cgcatggaag acggctttat ccgctcggtc ggactcggct
     7441 ccaacttagt gccgccgctg tcgctcgtta ccgacgatat gggtatttac ttcaatgccg
     7501 aagccccatc ccgccttgaa cacatcctgc aaaaccaaaa cttcgacgat caagactttc
     7561 agacggcctt gaagttgcaa aaaatgctga ccgaaaacca tatcagcaaa tacaacgtcg
     7621 gcaactcaga ctttaccgcc ccatcaaccg acaaaaccgt gatcctcgtt cccggtcagg
     7681 ttgaggatga tgcgtctatc cgctatggtt cgccccaaat ctatcacaat ctggatttgc
     7741 tccgtaccgt acgcgaacga aaccccaatg cctatatcat ctacaaaccg catcccgatg
     7801 tagtcagcgg taaccgcatc ggccatattt cccctgaaga tgctgcacga tatgccgacc
     7861 aaaccgccga acaagccgac atcctgacct gtctccaata cgcagacgaa atacatacca
     7921 tgacttcgct gaccggtttt gaagccttgt tgcgcggcaa aaaagtcagc tgctacggcc
     7981 tgccttttta cgcaggctgg gggcttaccc aagatctgct ccccatcccg cgccgtagcc
     8041 gcagacttga gctttggcag ctgattgccg gcacgctcat ccactatccc gactacatcc
     8101 accccgaaac ccatcaggcc ataaatgcgg aaaccgcagc ccaaatcctg atacgacaaa
     8161 aaaatatgca aaaaaacaac aacggattac atcgcgggta ctttgccaaa aaattaggta
     8221 aaatcaaaca actatatcga tctttcaaat aaataccatc aaagttaacg atgcgtcata
     8281 aacttgcctc tattgcggca tcattgcctt tgcatcgtta attctcttgg cgtatgcttg
     8341 aaagttcaac ctaaaactat tacataaaaa acaaaaccac attgcaacat gaaacagacc
     8401 gtcctcaaaa ataacctgca aaacctgctt gaaagcgcag aaaatatcct gctgcttcaa
     8461 ggccctgtcg gcgatttttt tctgcgcctt gccgactggc tgactgcaaa cggcaaaacc
     8521 gtacataaat tcaactttaa tgcaggcgac gactattttt atccgcccac tcaagcgcat
     8581 accgttgttt ttaacgacaa ctacgatgcc tttcctgagt ttttgcaaga atacatcact
     8641 caacatcaca tccaggccgt tgtctgcttt ggcgacacac gcccttatca cgtcattgca
     8701 aaacgcattg caaacgaaaa ccaagccagt ttctgggcgt ttgaagaagg ctatttccgc
     8761 ccctactaca tcaccttaga aaaagacggc gtcaacgcat tttccccgtt gccgcgccgt
     8821 gccgactttt ttcttgaaca attccctaag cttgcccagc aagaatataa agcgccaacg
     8881 ccggtacacg gcggttttac gcccatggca aaaaacgcta tccgttacta tatcgagttg
     8941 ttccgcaatc cacgcaaata ccccgactac atccaccacc gcgcacccaa tgccggccat
     9001 tacctcaaac cgtggtcgct ctccatcctc aagcgtttga actactatat tgaagacatc
     9061 caaatcgcca aacgtgtgga agcaggcaaa tacggcaagt tttttattgt tcccttacag
     9121 gtattcaacg acagccaagt ccgtatccat tgcgactttc ccagcgtccg cagcttcctg
     9181 ctccatgttt tgagttcatt tgccgagcac gcgcctgccg ataccaacat catcatcaag
     9241 catcatccga tggaccgcgg ttttatcgac tactggcgcg acattaaacg ctttatcaaa
     9301 gaacaccccg aactcaaagg ccgcgtgatt tatgtccatg atgtccccct gcccgttttc
     9361 ctgcgccacg gtctcggcat ggtcaccatc aacagcacca gcggcctgtc cggactgatt
     9421 cacaatatgc cagttaaggt tctcggccgt gcctattatg atattcccgg cattactgac
     9481 caaaatacct tggcagaatt ttggaatcat ccgacaccgc ctgacaaaga gctgttccat
     9541 gcctaccgaa tgtaccacct caacgtgacc caaattaacg gcaacttcta cagtcaggtg
     9601 tttttcccca acaaaaaaac ctccaactct tccacaccag taatctgact tagcgaagga
     9661 agttcaggcc gtctgaaaac atttcagacg gcctgaaaca atcaatacct tagctactgc
     9721 catgtaaata aaacacaaaa atctgcattt atcattaaca ataaattaca aaaacagtat
     9781 aatgaccgag ctgccatgag cgcataccga ctcaagctga ggccttaata acacacaaaa
     9841 tatggatgta ctcccaggca aaacaatata acaagccaaa catcctaaag ataagccagc
     9901 aaggcaatac actttacaaa actgtggcga gcaatatttt tacaaagccc tcaaccggta
     9961 tcgccgccca tatgccgcag catccgtctt ccactttata tccgcccgca aaccatgacc
    10021 gccgctcctg atatcctcta ccggcaagcc gccgcccttt tggaacaatc caataccgcc
    10081 caagccctgc ccctgttgca acaggcggca gagcaaggtt atgcggaagc tgctttcgta
    10141 ttgggcaacc atctgctgca aaacggccaa ccggagcagg cactttcatg gttggaagcc
    10201 gccgcggccc aacgccatcc caaagcactc ttctccctgc tgcaacaacg cgaacacaac
    10261 ggcaccccga ccggacagct tctcaacgac tatgcctggc tgggtgagca ggggcactca
    10321 gaagcccaat taatcctcat gcgttaccac gcgcaacgca acgatccaca atcgctctac
    10381 tgggcggaac ttgctgccgc ccgatatgcc gcacctgcgt attaccatct ggcacgccat
    10441 catcaacgcc aaggcgacgt tgaaacagcc atcgaacaat acgaaaaagc ggcagcactc
    10501 ggcgtaactg ccgcctgctg gcaacttggt caaatctact tctacggtac aggtgtcagc
    10561 cccaaccacg cacaagccga acactatctc gaaccagccg cacaagccgg ccacatcgcc
    10621 gcacaaaccc tgctggccga ccttcttgcc gcccaacgca aacccgaagc cttagaatgg
    10681 tatcgtcgtg ccgccaataa ggagcaagcg gaagcacaag ccaagctggc ccaatacgcc
    10741 ctgaccggcg aactttccga acgcgatccg ttccaagcgg cgcgctatgc caaagccgct
    10801 gccgagaaaa accatcctga agccctgaaa atcatgggcg acctctaccg ctacggcctc
    10861 ggcatcaaag ctgacaacca tatcgcgcac gattactacc accgtgctgc cgcgctgggt
    10921 tctgccgccg cagcacaaaa actcatcagc gacgccgcgc tgtaccatcc gcaacaatac
    10981 gaacaaatca aaactgccgc cctgcaacag caacaaaccg aaaccatcta ccgtttggcg
    11041 gaaacacaag cccatgccat cggtcgtccc gccgactata atgccgcacg caaaaattac
    11101 atggaagctg ctgagttcca ccataaaaac gcggcggctg ccttaggccg catctaccat
    11161 tacggcctcg gtacggcgca agatcctcgg gcggctgcac actggtacgc catcgctgcc
    11221 gaacaaaacc acccttccgc ccaataccac ctcgcctgtt tttactatca cggacaaggt
    11281 gtcggctgtc atgttccgac cgcctgctac tggctgcagg ctgccatcag caacggccac
    11341 acttcggccg aatcattaat atccctatta gaacaatggc gacgcgaagc acaccatgcc
    11401 atcggacaaa aggccgtctg aaaagattta cactcgcatt ttttgacaat ctttaactat
    11461 tcccctaata tttgccagtt atttttcacg gacacgccat tgttttcatt tctttctgaa
    11521 aacaccttgt ccgcgcatca ataccatgac actcggcgga taacgccaag cgttgaaaca
    11581 cactacatcc ggaacaaaaa cggatgctcg gaaaaatatt tctaggaggt gaaacaacat
    11641 ggaatgggaa ttcaacagtt attacacact gattgccgcc acgctcgtgt tgctggttgg
    11701 taaatttctg gttcaaaaaa tcaaattctt acgagacttc aatattcccg agccggtcgc
    11761 tggcggtttg gttgccgcga ttatcctgtt tgcgctgcac gaggcgtacg gcgtgagctt
    11821 caaatttgag aaaccgctgc aaaatgcgtt tatgctgatt tttttcacgt ccatcggctt
    11881 gagcgcggat ttttcccgtt tgaaggcggg cggtttgccg ctggtggttt ttaccgcgat
    11941 tgtgggcgga tttatcttgg tgcaaaactt tgtcggggtc ggactggcta cggctttggg
    12001 tttggacccg ctcatcggtc tgattaccgg ttcggtgtcg ctgacgggcg gacacggtac
    12061 gtcaggtgcg tggggaccta attttgaaac gcaatatggc ttggtcggcg caaccggttt
    12121 gggtattgca tcggctactt tcgggctggt gttcggcggc ctgatcggcg ggccggttgc
    12181 gcgccgcctg atcaacaaaa tgggccgcaa accggttgaa aacaaaaaac aggatcagga
    12241 cgacaacgcg gacgacgtgt tcgagcaggc aaaacgcacc cgcctgatta cggcggaatc
    12301 tgccgttgaa acgcttgcca tgtttgccgc gtgtttggcg tttgccgaga ttatggacgg
    12361 cttcgacaaa gaatacctgt tcgacctgcc caaattcgtg tggtgtctgt ttggcggcgt
    12421 ggtcatccgc aacatcctca ctgccgcatt caaggtcaat atgttcgacc gcgccatcga
    12481 tgtgttcggc aatgcttcgc tttcgctttt cttggcaatg gcgttgctga atttgaaact
    12541 gtgggagctg accggtttgg cggggcctgt aaccgtgatt cttgccgtac aaaccgtggt
    12601 gatggttttg tacgcgactt ttgttaccta tgtctttatg gggcgcgatt atgatgcggc
    12661 agtattggct gccggccatt gcggtttcgg cttgggtgca acgccgacgg cggtggcaaa
    12721 tatgcagtcc gtcacgcata ctttcggcgc gtcgcataag gcgtttttga ttgtgcctat
    12781 ggtcggcgcg ttcttcgtcg atttgattaa tgccgcgatt ctcaccggtt ttgtgaattt
    12841 ctttaaaggc tgattttccg cctttccgcc aaagcacctg caaggtttac cgcctgcagg
    12901 tgcttttgct atgatagccg ctatcggtct gcaccgtttg gaaggaacat catgtatcgg
    12961 aaactcattg cgctgccgtt tgccctgctg cttgccgctt gcggcaggga agaaccgccc
    13021 aaggcattgg aatgcgccaa ccccgccgtg ttgcaaggca tacgcggcaa tattcaggaa
    13081 acgctcacgc aggaagcgcg ttctttcgcg cgcgaagacg gcaggcagtt tgtcgatgcc
    13141 gacaaaatta tcgccgccgc ctacggtttg gcgttttctt tggaacacgc ttcggaaacg
    13201 caggaaggcg ggcgcacgtt ctgtatcgcc gatttgaaca ttaccgtgcc gtctgaaacg
    13261 cttgccgatg ccaaggcaaa cagccccctg ctgtacgggg aaaccgcttt gtcggatatt
    13321 gtgcggcaga agacgggcgg caatgtcgag tttaaagacg gcgtattgac ggcagccgtc
    13381 cgcttcctgc ccgtcaaaga cggtcagacg gcatttgtcg acaacacggt cggtatggcg
    13441 gcgcaaacgc tgtctgccgc gctgctgcct tacggcgtga agagcatcgt gatgatagac
    13501 ggcaaggcgg tgaaaaaaga agacgcggtc aggattttga gcggaaaagc ccgtgaagaa
    13561 gaaccgtcca aacccacgcc cgaagacatt ttggaacaca atgccgccgg cggcgatgcg
    13621 ggcgtacccc aagccgcaga aggcgcgccc gaaccggaaa tcctgcatcc tgacgacggc
    13681 gagcgtgccg ataccgttac cgtatcacgg ggcgaagtgg aagaggcgcg cgtacaaaac
    13741 cagcgtgcgg aatccgaaat taccaaactt tggggaggac tcgataccga cgtgcaaaaa
    13801 gagttggtcg gcgaacaacg caagtgggcg caggaaaaaa tcagcaactg ccgacaagcc
    13861 gccgcgcagg cagaccggca ggaatacgcc gaatacctca agctgcaatg cgacacgcgg
    13921 atgacgcgcg aacggataca gtatcttcgc ggctattcca tcgattaggg gcaaaccgat
    13981 gactaccgtc cccaaaagca ggattcccgt caaaccgctg cccgaaaaaa ccacagacga
    14041 agccaaagtc gaaaaatggc ggcagctcgg tgcggaacac ggtttgtcgg gcgaatgggc
    14101 agttgccgcc agattgggcg agaacggttt taccgaagaa cagatggaaa atatcgccaa
    14161 cctgttcggc agataaaggg aaaattgacg gaaatgccgt ctgaaaccct gttatcggtt
    14221 tcagacggca ttttgactaa tacggtacgc aggcgcaaaa cagccggctt tttatgtgtt
    14281 tcctatgctg atgttccaac acacaggacg atacaaaaag cgtcgcccta tgtgccgtcc
    14341 tgattcggaa agggttacgc tcctcccaaa tatagtggat taacaaaaac c
//
LOCUS       DBBZYD010000050        14335 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.050, whole genome shotgun sequence.
ACCESSION   DBBZYD010000050 DBBZYD010000000
VERSION     DBBZYD010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.050"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(191..2248)
                     /gene="ppk1"
                     /locus_tag="ACJJDL_001241"
     CDS             complement(191..2248)
                     /gene="ppk1"
                     /locus_tag="ACJJDL_001241"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HGG7573962.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELAQEGIHFYRRRNWTGAQKKWIESYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDVQNLRAAIQNELHDREYGDGVRLEVADTCPSYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRATPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(2417..2860)
                     /locus_tag="ACJJDL_001242"
     CDS             complement(2417..2860)
                     /locus_tag="ACJJDL_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HGG7573963.1"
                     /translation="MPFRLFLGILCDLSMVAPVYAQGQPDAVNAYIQKKKVIVNTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(2867..3382)
                     /locus_tag="ACJJDL_001243"
     CDS             complement(2867..3382)
                     /locus_tag="ACJJDL_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HGG7573964.1"
                     /translation="MKIKQIVKPGLAVLAAGILSACATKSNVKADGATDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVHEWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            3649..6279
                     /gene="leuS"
                     /locus_tag="ACJJDL_001244"
     CDS             3649..6279
                     /gene="leuS"
                     /locus_tag="ACJJDL_001244"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HGG7573965.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     AAAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYADKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVSAEAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFKRLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLEAAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEASLVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            6514..7326
                     /locus_tag="ACJJDL_001245"
     CDS             6514..7326
                     /locus_tag="ACJJDL_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HGG7573966.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEQYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KNLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKEGFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            7319..8128
                     /locus_tag="ACJJDL_001246"
     CDS             7319..8128
                     /locus_tag="ACJJDL_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7573967.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFADPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            8125..8679
                     /locus_tag="ACJJDL_001247"
     CDS             8125..8679
                     /locus_tag="ACJJDL_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573968.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRKLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYSINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
     gene            complement(9554..9865)
                     /locus_tag="ACJJDL_001248"
     CDS             complement(9554..9865)
                     /locus_tag="ACJJDL_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7573969.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(9862..10229)
                     /locus_tag="ACJJDL_001249"
                     /pseudo
     CDS             complement(9862..10229)
                     /locus_tag="ACJJDL_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(11033..11118)
                     /locus_tag="ACJJDL_001250"
     tRNA            complement(11033..11118)
                     /locus_tag="ACJJDL_001250"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11082..11084),aa:Leu,seq:gag)
     gene            complement(11132..11482)
                     /gene="secG"
                     /locus_tag="ACJJDL_001251"
     CDS             complement(11132..11482)
                     /gene="secG"
                     /locus_tag="ACJJDL_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HGG7573970.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(11489..12262)
                     /gene="tpiA"
                     /locus_tag="ACJJDL_001252"
     CDS             complement(11489..12262)
                     /gene="tpiA"
                     /locus_tag="ACJJDL_001252"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HGG7573971.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            12446..12949
                     /locus_tag="ACJJDL_001253"
     CDS             12446..12949
                     /locus_tag="ACJJDL_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HGG7573972.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRF
                     EASRQAA"
     gene            13051..13707
                     /locus_tag="ACJJDL_001254"
     CDS             13051..13707
                     /locus_tag="ACJJDL_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HGG7573973.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALEEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRRGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            13786..14109
                     /locus_tag="ACJJDL_001255"
     CDS             13786..14109
                     /locus_tag="ACJJDL_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG7573974.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
BASE COUNT         3301 a         3475 c         3939 g         3620 t
ORIGIN      
        1 aatttaatcc actataatgc cgtctggaat gcggcggctt ggggttggga gcgtataggg
       61 gaagtgcttg tgcaggaatg gcgaaggtgt gtttttgact ccggtccgcc ctgtttagat
      121 tgctgtaaaa ccatgccgtc tgaaacggaa aggtttcaga cggcatggtt tttgattggg
      181 gcggtgcggg tcagcctccg agcagtgtcc acaaatcgtt ttgcaggtcg gcttcgcttt
      241 cgccctcggc gggcgtggcg cggatatagc cgccgtcggg ctgcatcagc cacgcgtgcg
      301 tattgtctgc caatgccatt tccaaacctt cgcggatgac gcgttttttg agttcgggcg
      361 cggtaatcgg cgcggcggtt tcgatgcggc ggaagaagtt gcgccccatc caatccgcgc
      421 tggagataaa ggtatcgtcc gcgccgttgt tgtggaagca atacacgcgc gcgtgttcga
      481 gctgcctgcc gatgatggag cggacgcgga tgttttcgga caagcctttt acacccgggc
      541 gcaaggtgca cataccgcgc acaatcaaat cgatttgtac gcctgccgcg cttgcccgat
      601 acagggcttc gatgacggtc ggttcgatga gcgaattcat cttggcggta atccgcgccg
      661 gtttgccggc ttttgcgtgt tcggtttcgc gtgcgatgcg gtcgataacc attttgtgca
      721 gggtaaacgg gctttggtag agtttgttca gccgcccggg tttgcccaag cctgtgattt
      781 ccataaacaa tgtgttcaca tcggcggtga tttgttcgtc ggcggtaatg atgccgaagt
      841 cggtgtagat gcgcgatgtg ccttggtggt agttacccgt gccgaggtgg gcgtaacgct
      901 tgagtacgcc gtcttcgcgg cggatgacca gtgccatctt ggcgtggact ttgtagccga
      961 acacgccgta cacgacgtgc gcgcccgcct cttcgagctg cttcgcccag ttgacgttgt
     1021 tggcttcgtc aaaacgcgcc atcagttcga cgacgacggt tacttgtttg ccggcgagtg
     1081 ccgccttcat cagggcgcgg acgagttcgg aacgcgtgcc ggtgcggtaa atcgtcattt
     1141 tgacggcaag cacgtcgggg tcggcggcag cttcgcgcat catttcgaca acggggtcga
     1201 acgattggta ggggtggtgc agcaggatgg gcgattggcg caccaaatcg aatatggacg
     1261 cggttttgcc caaggctttc agtctgcccg gcgtgtgtgt gggaaatttc aaatcggggc
     1321 ggttgactag gtcggggacg gcgttgaggc gcacgaggtt gaccgggcct ttgacctgat
     1381 agagttcggc ggcggtcagt ttgaattgcg cgagcagaaa gtcgcggatg taggagggac
     1441 aggtgtcggc gacttcgagc cgcacgccgt cgccgtattc gcggtcgtgc agttcgtttt
     1501 gaatggcggc gcggaggttt tgtacgtctt cttcgtcaac ggtcaagtcg ctgtcgcgcg
     1561 tgaggcggaa ctggtggcag cctttgacgt tcatgcccgg gaagagtttg ccgacgtggg
     1621 cgtgcaggat ggaggagagg aagacgaagc cgtgtccgcc gccacacagt tcggacggca
     1681 ggggaacaac gcgcggcagg atgcgcggtg cctgcacaat cgccatcccc gaaggcctgc
     1741 cgaacgcgtc cgtgccgtcg agttcgacgg cgaagttgag cgatttgttc agcggtcgcg
     1801 ggaaggggtg ggacgggtcg agtccgatgg gggtcagaat cggcagcaat tcgcggtcga
     1861 aatagctttc gatccacttt ttctgcgcgc ccgtccagtt gcggcggcgg taaaaatgga
     1921 tgccttcttg tgccagctcg ggctgaagga cgttgttgaa caggtcgtac tggtgccgta
     1981 tcagggagcg cgccgcttcg gtaacgtcgg cgatggtttc agacggcatt ttgccgttgt
     2041 ccagcctgcg ccgggggtgc agcttgtttt cacgcttgag ccacgccatg cggacttcga
     2101 aaaactcgtc aagattggac gacacgatgc acaggaagcg caggcgttcc aaaaggggga
     2161 cgtttttgtc ttccgcctgt gccaacacgc ggcggttgaa tgccagcagg cttagttcgc
     2221 ggcagaggat gcggttttgt tcgggcataa ggttctccca aagatggttg ttgttcggtc
     2281 ggagcgggca ggcaatgccg tctgaaggct tggcggcatc tgcgccggtt tcagacggca
     2341 tgacgtggcg gacagtctgt ttcaggcatc ggggcaatgt gaaaacagat accggcgcgt
     2401 gcggtatccg tctgtttcaa atcacttcca acacaaaata atgacgcagt ttttcgtaca
     2461 ccgcatcgct gacgttgatg cagccgttgg tcataatcct gtcggacacg gacggggagg
     2521 cgatgcgttc gttccgcctt tccgacggta tctgattcca aacgcggtgc agggcgaaaa
     2581 gaaaatcacc ctcctgcttg aaaccgatga cttcgccgcc gtatccaggc ttgtcggtac
     2641 tgttcagcgt cagcccgaac gtccccttgg gcgtggcaac accgatgagg acggggtggc
     2701 actgcctgtc atcggcaaaa cagagttccg ctttggatgt gtttacgatg acttttttct
     2761 tttgaatata agcgttgacc gcatccggtt gcccctgtgc atatacgggg gcaaccatcg
     2821 ataggtcgca caatatccct aaaaacaggc ggaacggcat gtcggattat tggcggatac
     2881 gtttcggttt tgccggcacg atttcgcgga tgatgacttg cggctcggct ttgggtgcgg
     2941 gcggcggaca ggcggcatct ttcgggaaga cggggttcca gtagaagctg cgggcaaatt
     3001 tgtctttatc gaaaatcact ttgtattggc aggtagtaac atcttctacg ccggacgtgt
     3061 tttcagggtc gatacctacg cccggggtat ggaagtggaa caggtaatcc cattcgtgta
     3121 cgccgtacat gccttcgtcg taatgcgggc gacccaggat tttgtagatg tcgtctttgg
     3181 tcaggccggg gcgcatctga tccagttcgt cataggtcgg gaatgtgccg cgcttgttgt
     3241 cgagcgttac ggaatagggt ttcgggaaaa ccggattgtc ggtcgctccg tcggctttga
     3301 cgttgctttt ggttgcgcag gcagacagaa tgcccgccgc caatactgcc aagcccggtt
     3361 tgacgatttg tttgattttc atatgcagaa tcctttttta cccgatgccc gtctgccttt
     3421 tgttcggaag agccgcatca ggagagtttt aaacatttga ttttggtttg taatattagc
     3481 ataaaaaacg tgcgtatcag taaacgcggt gtatttgtac ggcatacgga atgatgcgcg
     3541 tgcgaattta cgcatcctgc cggcaatttg ccgattcgcc gacatcggca acctgttata
     3601 attcctcctt taaattccta acgttttcaa gcgaaaaaca gaatgactat gcaagaacaa
     3661 tatcaacccg ccgccatcga gcctgcggcg cagaaaaaat gggacgacgc ccgtattttc
     3721 aacgtctccg aagacgcttc caaacccaaa tactactgcc tctccatgtt cccctacccc
     3781 agcggcaagc tgcatatggg gcatgtgcgc aactacacca tcggcgacgt attgagccgc
     3841 ttcaaacttt taaacggctt caacgtcatg cagcctatgg gttgggacgc gttcggcatg
     3901 ccggcggaaa acgcggcgat gaaaaacaac gtcgcccctg ccgcttggac gtacgataac
     3961 atcgaataca tgaaaaccca gctcaaaagc ctgggttttg cgattgactg ggcgcgcgaa
     4021 accgcaacct gcaaacccga atactaccgc tgggaacaat ggctgtttac caagctgttt
     4081 gaaaaaggca tcgtttatcg caaaaacggc acggtaaact gggacccggt cgaccaaacc
     4141 gtccttgcca acgagcaagt tatcgacgga cgcggttggc gttcgggcgc gttgatcgaa
     4201 aaacgcgaaa tcccgatgta ttacttcaaa atcaccgatt acgccgaaga gctgctcaac
     4261 gacttggaca agctggaaca ctggcctgaa caagtcaaaa ccatgcagcg caactggatc
     4321 ggcaaatctc gcggcatgac cgtgcgcttt gctgtttcag acgacagcaa acaaggcttg
     4381 gaaggcgatt acgcgaaatt cctgcaagtt tataccaccc gccccgacac gctgatgggt
     4441 gcgacttatg ttgccgttgc cgccgagcat ccgctggcag ccgccgcagc cgccgacaaa
     4501 cccgaattgc aggcatttat tgccgaatgc aaagccggtt cggttgccga agccgatatg
     4561 gcgacgatgg agaaaaaagg cgtgccgacc ggtcgctacg tcgtcaaccc gctcaacggc
     4621 gacaagctgg aagtgtggat tgccaactat gtattgtggg gctacggcga cggcgcagtg
     4681 atggcggttc cggcgcacga cgaacgcgat tttgagttcg ccgccaaata caatctgcct
     4741 aaaaaacaag tcattgccgt cggcgacaac gcattcgacg caaaccgatg gcaagaatgg
     4801 tatgccgaca aagaaaacgg cgtattggtc aacagcggcg acttggacgg cttggatttt
     4861 cagacggcat tcgatgccgt tgccgccaag ctgcaaagcc aaggcgcggg cgaaccgaaa
     4921 acccaatacc gcctgcgcga ctggggcatt tcgcgccaac gctactgggg ctgtccaatt
     4981 cccatcgtcc attgtgaaaa atgcggcgac gtacccgtcc cagccgacca actgcccgtc
     5041 gttctgcccg aaaacgtcgt acccgacggc atgggttcgc cgctggcaaa aatgcccgag
     5101 ttttacgaaa ctgcctgccc gtgctgcggc ggcgcggcga aacgcgaaac cgacaccatg
     5161 gacaccttca tggaatcaag ctggtatttc ttccgctata tgtcgcccaa gttttcagac
     5221 ggcatggtat cggcagaagc cgcgaaatac tggggcgcgg tcgaccaata catcggcggt
     5281 atcgaacacg cgattttgca tctcttgtac gcgcgtttct tcaccaaact gatgcgcgac
     5341 gaaggtttgg tcaatgttga cgaaccgttc aaacgcctgc tcacgcaagg catggtcgtc
     5401 tgcgaaacct actaccgcga aaacgacaaa ggcggcaaag actggatcaa ccccgccgat
     5461 gtcgagctga cgttcgacga caaaggccgc cccgtttccg ccgtcctcaa agccgacggc
     5521 ctgcccgtcg tcatcagcgg cacggaaaaa atgtccaagt ccaaaaacaa cggcgtcgat
     5581 ccgcaagaac tgattaacgc ctacggcgcg gacaccgccc gcctgttcat gatgtttgcc
     5641 gcaccgcccg aacagtccct cgaatggagc gacagcggcg tcgaaggcgc acaccgcttc
     5701 ctgcgccgcc tgtggcgcac cgtttacgaa tacctgaaac aaggcggcgc ggtcaaagcg
     5761 ttcgcaggca gccaagatgg tttgtctaaa gaactcaaag acctgcgcca caaactgcat
     5821 tccactatcg ccaaagtcag cgacgactac ggccgccgcc agcagttcaa caccgccatc
     5881 gccgccgtga tggaattgct caaccaatac gacaaaaccg acaccggcag cgaacaaggc
     5941 cgcgccgtcg cccaagaagt attggaagcc gccgtacgtc tgctgtggcc catcgtgccg
     6001 cacatctgcg aaaccctgtg gagcgaattg aacggcgcga aattgtggga agcaggctgg
     6061 ccgacagtcg acgaagcctc cttggtcaaa tccgaaatcg aagtcatggt tcaagtcaac
     6121 ggcaaactgc gcggaaaaat caccgtcgcc gccgacgcat ccaaagccga cctcgaagcc
     6181 gccgcactcg ccaccgaggg cgcagtgaaa ttcatggaag gcaagcccgc caagaaaatc
     6241 atcgtcgtgc cgggcagact ggtgaacatc gtcgtctaac cgcttttaag gtttagccac
     6301 acggataaag gccgtctgaa acttggaaac agggtttcag acggcctttt taaggcagat
     6361 ggagttgata agtccaataa catattggaa tggaaaggtt ctattggatt tagactcact
     6421 ctacacacgc ccccaaatat aaatccattg tattcctcac gatgttttgg cacaattcca
     6481 agccaatcaa ccacgcttgt actcggcatc ctaatggctt caaaaccttt tctaaaatgg
     6541 gcaggcggca aacataaact tgtccccttt atcgaacaca atctacctac tcccacacga
     6601 aaacgcctga ttgaaccctt ttgcggttct gccgctttgt ctcttgcatt ggatttcgaa
     6661 caatatctgc tcaatgatat taacgctgac ttaatcggct tattccgtat cctaaaagaa
     6721 gaaaaatccg gattcatcga ctacgcccgc tctttcttta tttccgaaaa caatagcgat
     6781 tcaagattct atgaattgcg ggaacaattc aacttcagca aaaatctgca cgaacgctcg
     6841 gcactattta tttatttgaa ccgtcatgct tttaacggtt tatgccgtta caacagcaaa
     6901 ggggtattca atgtgccgtt cggacgctac aaatcgccgt actttcccca acaagaaatg
     6961 gaaggtttca ttcagaaatc tgacagagtt gaattaatgt gcggagattt tcaaatgatt
     7021 ctatctcaga cagacaatac cgatacggtt tattgcgatc ccccttacgc gcctttaagc
     7081 ccaaccgctt catttaccac ttatgccaaa gaaggtttca atttagacaa tcaaatccgt
     7141 cttgcccagt cagcccaaca aattgcgccc gattcccaag gcgttttgat ttcaaatcat
     7201 gatactgaat tcacaaggga tatttattct tttgctattc tgaaaacaat tgaagtacaa
     7261 cgcaatattg ccgcaaaagg cagcagccgt aaaaaagtcg gagaattatt ggcaatttat
     7321 gattgatttt gacaaaccgg ctgaagaaga cgccatttat caaagtcgtt tgaaaaaaat
     7381 cgtttcagac gaccttgtcc tctacaacga aaattccctt aacgtcatgc ggaagatatt
     7441 ggaaaaatat ccaaacggct gttttgatat gattttcgca gacccgcctt actttctttc
     7501 caatgacggc ttcagttgtc aaaacggaca aatggtttcc gtcaataagg gcaactggga
     7561 taaatccaaa ggaatggcgg cagatttgga attctacgaa gaatggctcc gactgtgtta
     7621 cgccttatta aaaccaaacg gcacaatttg ggtttgcggc acattccata atatttattt
     7681 aatcggctac ctgatgcaaa ctatcggata ccatattttg aacaatatta cttgggaaaa
     7741 acccaatcct ccccctaatt tgtcctgccg tttttttacc cattcgacag aaacaatctt
     7801 atgggcaaag aaaaataaaa aagccaaaca cacgtttcat tatgaaatga tgaaagcaca
     7861 aaatgatggc aaacagatga aatgtgtttg gacatttcct cctccaaaca aagccgaaaa
     7921 aacattcggc aaacatccga cacaaaaacc actccccttg cttgaacgct gcatactctc
     7981 agcttcaaac atcggagatt taatttttga ccctttcatg ggcagcggca caacaggcgt
     8041 tgccgcctta aaacatggtc ggaaattttg tggttgcgaa ctggaagaag atttttttga
     8101 attagcaaaa aaaaggttag aaaaatgatt attggcggaa tcggtggtgc aaggacacaa
     8161 acaggactca gattcgaaga acgtacagac ttacgaaagt tgtttgaaga aattcccggg
     8221 tacgacttaa gaaaaacata tgataatgcg ggttatgaag tttggttcaa tggagaattg
     8281 aaggcttatt gttttaaaaa atatgagttt taccgatttt tgaaaagacc gggatacagt
     8341 attaattgga aagaccatct gtctaaaaga ttactacccg acaatggctt atttatcatc
     8401 atccgtgata ccttatttat tattgagatc aaattccaac aaactcccgg ttcagtagat
     8461 gagaaattac aaacttgcga ttttaagaga aaacaatata caaaattggt tcactcttta
     8521 ggttggcggg ttgaatatgt ctatgttttg aatgattggt ttacaaagcc ggaatataaa
     8581 gatgttttag attatattat cagtgttaac tgccattacc aatttaacac gattccctta
     8641 aggtggtttg gactgcctga tggtgaaaca aatgaataaa taccatattt aaaacacagc
     8701 cgttcaaggt cgtctgaata tcatttcaga cgacctttca ccaatccccg ccgttttcca
     8761 tctttctgct attgtgataa agtagcccga ccttttgttc aaaatacgcg gattccgcga
     8821 cactgaatgc agcatctgtc aaagattatt tgaaaacggt cgagttagac aagtctgccg
     8881 acaatgtcga taccacatcc aaaactatcc gcagggttta ggcggtattc cagagtacgg
     8941 tgtcttatgc tgatgctgta aacaatgccc gtatagaaaa tctaaaacgg ttgttgccga
     9001 ccgttatgcc ggtttatgag caaagtgtca gaaataaggg gcgcgttaat atagtggatt
     9061 aaatttaaat caggacaagg cgacgaagcc gcagacagta cagatagtac ggcaaggcga
     9121 ggcaacgctg tactggtttt tgttaatcca ctataaaaaa cgtcggcgtt aagggaaggg
     9181 gatcgagaat ttgagccgtt gtttcaaaat gccgtctgaa atcgtttgag attcagacgg
     9241 catttaaaca gttctgcgcc cgcccgtttt gccttcaagc ccgcgccgct taaatccaat
     9301 cccccctgca acgggcgcaa aaaaatctcc gtgcctcgcg gtcggggatg tttcgggttt
     9361 cacgcccgtc tgcgccgtgc cttgctgtcg ggctatgccg tctgcaccgc cgccgtttcg
     9421 gcttggtttg atgcggtcgg gcatttatgc ggctacgccc tgatattcag ttcggcggtc
     9481 ttgcctgttt tggcaggcat attcagcagc gcgtctattg tgaacttgct gattttgccg
     9541 tttgccaagt cggctacgca atggcttcga tacccttgtt tttgacgatg gtcagcagct
     9601 tcaacgccgc gccgctgggc tttttaacgc cccgctccca agccgaaacg tgattttttc
     9661 ccacgttgag atagatggcg aaagcggctt gcgatagtgc ctccttctcc ctgattgcct
     9721 tgatgtctcc gccgctcaac ggtttgattt cggtcaggca ggacttgtca aagccgcgca
     9781 tagtcttttt gtcgattgcg ccgatgttgt aagccccttc catcatttca tgaatggcgg
     9841 ctaatgcctc gcttttgtat ttcatgattc tatctccgtg ataatgccgt cttctttcaa
     9901 agccgccagc tctgcccgcg tgtatttcag ataatatgcg gcggcttttc ggtaaacgtc
     9961 cagttcttta tccgaaatgt tttccctgtc gttcttggca aaggcgtaaa cgaaaatgcc
    10021 ctatctgcct gtttgaacaa tatcaggctg cgatagccgc cgcttctgcc ttgtccttgc
    10081 cttgctatgc gctgcttaat cacaccgccg cctaaatctg cgtctatcag cccgttatcc
    10141 gcccgctcta ccgcttccag cagctcggaa tcgttgattt tgtgcttctt ggcaaatttc
    10201 actatccatt ggtttttgaa tatccgcatt gtgtagccgt tgattagtga tacttggaat
    10261 tataccagag acagacaaca cggcaagctg ccttttttat gccccgcaat ttctccgttt
    10321 atgccgcctg aaacactggc ggctaacctg attatttttt aatcaatcgc ttttaatggc
    10381 tcaaattgcg tttttagcgc gtttcgctgt cttcctatgt ccccatatat aaccaagtgg
    10441 tttaaccgcc attcctgctc aaaataggcg cggttccgtg cgttttggct tttcattccg
    10501 ctacgctccc actgccaaga cggtgaaaaa ccggaaaacc ccaaaagttg ttaccgattc
    10561 gttaccattt gttaccgcat ttgttaccaa ttttttatct ttttcttatt ttatagtgaa
    10621 ttaaatttaa accggtacgg caaggcgagg caacgccgta ccggtttaaa tttaatccac
    10681 tatagtatag gttttttcca aaaacccaaa aaaaaaccgc tctgcatctt ggacggtttc
    10741 cccctcattc cctacggtgc gtcagtattc cccgcaagct atttcccgct tggcattcct
    10801 gatttggtgg tcgttcagct ttatttttac ggtattttct cgcggtattt tcggatgctg
    10861 taaaaaatca ggttagttca attagggtgg attggacggg attgtacggt caggaagggg
    10921 gacggcagga taacaatcag cctgaaagcc ttgtattgat tgggattggt tgacggcatt
    10981 agacaggatt aaacgaaaaa aaacgcttag aatttctaag cgttttgtgt gttggtgccg
    11041 acagcgagat ttgaactcgc acagcctacg gccactaccc cctcaagata gcgtgtctac
    11101 caatttcacc atgtcggcat ttgaaaaact gttatttctg ctgctgagga acaggggcag
    11161 aaggttcggt attgcttacg ggtttgggtg cttgctgagt ttgttgtacg ttgctgaagt
    11221 ccaaaccgtg ttttgttgtg tgggtgtgaa tatacaccat agccatgcag gttgcaaaga
    11281 aaaatgttgc tgcaacggcg gtcgagcggc tgaggaagtt agcgttgccg gcagagccga
    11341 atacgccttg cgcgctgccg cttcccgatc cgaaagtcgc gccggcatcc gcgcctttgc
    11401 cgtgttggag caatactaac acgatgacgg ccaaagcgga aattatatta acaatccaaa
    11461 ttagggtttt gaaggcttcc atatttttct acgcattttg tgcggcactg atgatggcgg
    11521 taaaggagtc gtacgacaat gacgcgccgc cgacgagtgc gccgtccaca taaggtactg
    11581 cgaagatgtc ggccgcgttg tccgctttca cacttccgcc gtaaaggacg cggattttaa
    11641 catcgcttcc gcacaaagac aagatttctt tgtagatgaa tgcgtgcata tcggcaatct
    11701 gttcgacggt ggcgactttg ccggtgccga tcgcccagac gggttcgtag gcgacggcga
    11761 tgtttttggt atccagccct tgcaggatgg aaagctgatg ggcgatgact tcgtgttctt
    11821 tgccggcttc gcgctcttcg aggctttcgc cgacgcacaa taacgggatg agtccgacgt
    11881 tgaggacgtt ttccattttg cggcgttgga tttcgttttt ttcgccgaaa taaaggctgc
    11941 gttcggagtg tccgatgagg acgatgtctg tgccggtgtc ggcgagcatt tcggcggaca
    12001 cttcgccggt gtacgcgccg ttgtcgggga agcggctcac gtcttgggcg caggtgagga
    12061 tgcggttgtt taagacgatt tgcatggcgt tgtgcagttg cagcaggtaa acggtcgggg
    12121 cggcgagtcc gatgaggacg cgttcggcgg tggggaggat gcggaagcgg tgcatgagcg
    12181 aattgttgtt ctggagccgg ccgttcattt tccagttgcc gatgacccat ttttgatccc
    12241 acattccgat ttggtgatac atcttttttg ctccgtgtcg tgttttttct gtctgccgcg
    12301 tgtggcgcgt tgcaatgtga agtttagtgg atatgcggcg ggttcgcaac ttggggcggg
    12361 cggctgcggg ggcggtttgg aatgttgttt cgggcaggtt gttttataat ggccgcctga
    12421 tatgtatgca actataggag atgtgatgca cgcgcttcat ttttcggctt cggacaaggc
    12481 cgcgctttat cgggaggtgt tgccgcagat tgagtctgtg gtggcggacg agacggattg
    12541 ggtggcgaat ttggcgaaca cggcggcggt tttgaaggag gcgttcggtt ggttttgggt
    12601 gggtttttat ttggtcgata cgcgttcgga cgaattggtt ttggcaccgt ttcaggggcc
    12661 tttggcgtgt acgcggattc cgttcggtcg cggggtgtgc ggtcaggctt gggcgaaggg
    12721 cgggacggtg gtcgtcgggg atgtggacgc gcatcccgac catattgcct gttcgtcttt
    12781 gtcgcgttcg gagattgtcg tgccgctgtt ttcagacggc cgctgtatcg gcgtgttgga
    12841 cgcggacagc gaacatttgg cgcagtttga tgagacagat gctttgtatt tgggcgaact
    12901 ggcgaagatt ttggagaagc ggtttgaggc ttcgcgccag gcggcttgag tgatggaaag
    12961 gggcgggcgg cgcgtgccga agttggcgcg gcgggagtgt ggttttataa tgcctgccat
    13021 tgttgaaaca attatttgac ggagcactaa atggattttg aaaaagcgcg gttcaatatg
    13081 gtcgaacagc aaatccgtcc ttgggatgta ttggattttg acgttttgga cgctttggag
    13141 gagattccgc gcgagctttt tgtcgatgag gatttgcagg gtttggcgta tgcggatatg
    13201 gcgctgccgc ttgccaacgg tcataagatg ctggagccga aagtcgtggc gcggctggcg
    13261 cagggcttga agctgacgaa aaacgatacg gttttggaaa tcggcacggg ttcgggctat
    13321 gcgaccgcgc ttttggcaaa attggctggt cgtgtggtgt cggacgacat cgatgccgaa
    13381 cagcaaaacc gcgccaaagc ggtgttggac ggcttgtctt tggaaaacat tgattatgtg
    13441 caaaacaacg ggttgaccga actttccgca ggtgcgccgt ttgatgcggt ttatgtcggc
    13501 ggtgcggtaa accttgtgcc tgaagtgttg aaagaacagt tgaaagatgg cggacgcatg
    13561 gtggttatcg taggacgcaa gcctgttcaa cgcgcgcttt tgattacgcg caggggcgat
    13621 gtgtttgaag agaaggtgct gttcgatacc ttggtggcgc atttggatga taaggatgcc
    13681 gatccgtttg gtggttttca gttttgatgt tcggattgcg atgccgtctg aaagcgggtt
    13741 tggggcttca gacggcattt tgcttggttt tttttggggg gtgcgatgga tattgtgcaa
    13801 cttgggtcgg cggaattgaa ggcgtggatg gacgaagggc ggatgttttg tttgttggac
    13861 gtgcgtacgg atgaagaaac ggcggtttgt tcgctgccaa atgcgctgca tatcccgatg
    13921 aatctgattc cgctgcggca gaacgagctg ccggatgatg tgccgcttgt ggtgtattgc
    13981 caccacggta tccgcagcct gcatacggcg atgtatctgg cggacgcggg ttttgaaaac
    14041 ctgtacaacc ttcagggcgg catcgatgca tgggcggccg agattgacgg caacatgatg
    14101 cgttattgag gcaggcattt cagacggcat tccttaaatg cgtgtacctg tggtgttcca
    14161 aaaggtcgtc tgaaagtgca gcttctgcga agctaaagcg cggtatcaac gaagttaaaa
    14221 tttgcctgaa ccttaaaggc agcctgcacc ccaatcccct ctcccgtggg agagggctag
    14281 gacgaggctg gcaaactgaa agtttgcttg ggcggcattt tcaatgtgca ggctg
//
LOCUS       DBBZYD010000051        13962 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.051, whole genome shotgun sequence.
ACCESSION   DBBZYD010000051 DBBZYD010000000
VERSION     DBBZYD010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13962
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.051"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..875)
                     /gene="mafA"
                     /locus_tag="ACJJDL_001256"
     CDS             complement(<1..875)
                     /gene="mafA"
                     /locus_tag="ACJJDL_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7573975.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNS"
     gene            complement(1139..1288)
                     /locus_tag="ACJJDL_001257"
                     /pseudo
     CDS             complement(1139..1288)
                     /locus_tag="ACJJDL_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1514..2233)
                     /gene="pyrH"
                     /locus_tag="ACJJDL_001258"
     CDS             complement(1514..2233)
                     /gene="pyrH"
                     /locus_tag="ACJJDL_001258"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HGG7573976.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(2477..3331)
                     /gene="tsf"
                     /locus_tag="ACJJDL_001259"
     CDS             complement(2477..3331)
                     /gene="tsf"
                     /locus_tag="ACJJDL_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HGG7573977.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPATVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKKAVDYAA
                     EVAAAAKV"
     gene            complement(3460..4188)
                     /gene="rpsB"
                     /locus_tag="ACJJDL_001260"
     CDS             complement(3460..4188)
                     /gene="rpsB"
                     /locus_tag="ACJJDL_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HGG7573978.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQEAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(4361..4594)
                     /locus_tag="ACJJDL_001261"
     CDS             complement(4361..4594)
                     /locus_tag="ACJJDL_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573979.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFT
                     ITVRRRNHLMRQQEQAESEQQRAQRQKDSGTKP"
     gene            4672..5253
                     /locus_tag="ACJJDL_001262"
     CDS             4672..5253
                     /locus_tag="ACJJDL_001262"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HGG7573980.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINHLLKRYIKKGR
                     KIGVYWPMGKELRLDGFVRAAQKRGVKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     AKLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVGTLPREAHDLPLDGFVSEAGILCF"
     gene            5314..5904
                     /locus_tag="ACJJDL_001263"
     CDS             5314..5904
                     /locus_tag="ACJJDL_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HGG7573981.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
     gene            6441..7907
                     /locus_tag="ACJJDL_001264"
     CDS             6441..7907
                     /locus_tag="ACJJDL_001264"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HGG7573982.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLRAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
     gene            complement(8094..8468)
                     /locus_tag="ACJJDL_001265"
     CDS             complement(8094..8468)
                     /locus_tag="ACJJDL_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HGG7573983.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(8706..9005)
                     /locus_tag="ACJJDL_001266"
     CDS             complement(8706..9005)
                     /locus_tag="ACJJDL_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7573984.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            complement(9160..9939)
                     /gene="map"
                     /locus_tag="ACJJDL_001267"
     CDS             complement(9160..9939)
                     /gene="map"
                     /locus_tag="ACJJDL_001267"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HGG7573985.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            complement(9979..10647)
                     /locus_tag="ACJJDL_001268"
     CDS             complement(9979..10647)
                     /locus_tag="ACJJDL_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573986.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKEKETPKENHTKPDTPKNTPPKPHKEIL
                     DNLF"
     gene            complement(10655..11263)
                     /locus_tag="ACJJDL_001269"
     CDS             complement(10655..11263)
                     /locus_tag="ACJJDL_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HGG7573987.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            complement(11327..11920)
                     /locus_tag="ACJJDL_001270"
     CDS             complement(11327..11920)
                     /locus_tag="ACJJDL_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HGG7573988.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAMCDCIDSVLLEGM"
     gene            complement(11925..12272)
                     /locus_tag="ACJJDL_001271"
     CDS             complement(11925..12272)
                     /locus_tag="ACJJDL_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HGG7573989.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            12318..13193
                     /gene="rsmI"
                     /locus_tag="ACJJDL_001272"
     CDS             12318..13193
                     /gene="rsmI"
                     /locus_tag="ACJJDL_001272"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HGG7573990.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGQLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMVELFPERRLMLAREITKTFETFLSGTVGEIQT
                     VLSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYDLALSWKNK"
     gene            complement(13228..13632)
                     /locus_tag="ACJJDL_001273"
     CDS             complement(13228..13632)
                     /locus_tag="ACJJDL_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HGG7573991.1"
                     /translation="MGSLFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAG
                     HGILYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGW
                     LLFAAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(13697..13861)
                     /locus_tag="ACJJDL_001274"
     CDS             complement(13697..13861)
                     /locus_tag="ACJJDL_001274"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7573992.1"
                     /translation="MNTNQPAVYDPLTRTLHWLTVAGFIGIPTTIVLWTIYSGLTKIR
                     TRRRSRRQYK"
BASE COUNT         2941 a         3288 c         4046 g         3687 t
ORIGIN      
        1 gagttacccg tatgattgcc gtatggtcgg atatcggaga aatcgaccat taatccttcc
       61 gtcggtttaa ttcctttgct tactttatac ggccccatcc acaatgcgta attttcttta
      121 taggcagctt caaacgcatt ggttttgggt ttgatgagca attttttatt ggttctgtct
      181 actgcgaaat attccagttt tgtttgggct ttcagtgttt cggcattgta taggtgcatt
      241 tcggttctgt tgcgtatcgt tccgaatacg tcgatgttaa taaacacatc tgtatcggca
      301 ttggcaggag aaacaacgtc tatgccgcgc aggaaaaata cggtctgtac caagtgggaa
      361 agaaaggcag tgtcgcgcgg gttagtcgtc aaggtttcat ttcgataatc ccccatcccg
      421 ccaatattta agcccagact gcttttactt ccgctaccgt ctgattgggt gcgagagcgt
      481 gcaggggcat taagtgtaga taaagaagtg gttaaacctg tcaaaccgcc tgatgttgtt
      541 tcagcggtgg tttcgtaacg tggataggtg taatcggtac ggacggcagg gctgtttatg
      601 tattcgccac gaatcagtgc atcaatggag tagcgacccc ctgtcaaact gcctgaacct
      661 tggtcgccca tagttgcaat gtacaatgca acttttcgtc cgtgtaatgc ctgtaaatcc
      721 atgtctttaa cggcagctct ggcagaagcg gccacaagtt cttgttcgac cgcaaagcgt
      781 ttacctccgc catgcgatgg aatacctgtc agtgtcccgc aggcggataa aataaaaact
      841 gaaaaaagaa taggtatcag cagccgtgct tgcatagatt ttctcctttg atgaaaaaca
      901 aattgtatca aaattgtaaa caaattataa attaaataaa atatttcttt actggttttg
      961 tggtttggtt ttcaataggc tgcccgcaca tagtgggatt tacggttgca atggctgcgg
     1021 cgtattttat agtggattaa attttaatca ggacaaggcg acgaagccgc agacagtaca
     1081 aatagtacgg caaggcgagg caacgctgta ctggtttaaa tttaatccac tataggcttt
     1141 tttcggtcag ttgccggtta atcagtcccg gcagttcgga cagggtgttg tcttgcgcca
     1201 acctgttgcg gtagcggcat aaggtgctgt aatcggggat gcttggtttg tcaaaacggc
     1261 aaaacaggtt gaaatcggtg cgggtgatgg gtacggcgtt gcccttatgc cgattttgtc
     1321 cgcctgctgc aaggcggttt gtctaatgaa aggaaaaatg ccgtctgaac attgttcaga
     1381 cggcattttc aaatggaagg caatatagtc ggcatatgaa aaattgatgt ataaggcagg
     1441 atgggtttag gcttgttaat ttccatataa taaatggccg tatgaagccc atatgcgact
     1501 atatctgccg gaatcagcag tgaaccagtg taccctcgtt ttcgccggtt accacgcgtt
     1561 tgagcgagcc ttctttagcg ataccgaata ctacgatatt gagcttgcgt tcgcggcaga
     1621 gggcgaaagc ggtggcatcc atcactttaa ggtttttcaa caaggcttcg tcaaaagtaa
     1681 tggtttcgta gcgtgttgca gatgggtctt ttttcgggtc tgcggtgtac acaccgtcaa
     1741 cgttggtggc tttgagcatc acgtcgcagt tcatttctgc accgcgcaat gcggcggcag
     1801 tgtcggtcgt gaagaacgga ttaccggtac cggcggcgaa aatcacgact ttgccttctt
     1861 ccaaatattg aatggcttta ggacgggcgt aagtttcggc gatttgctgc atagacagtg
     1921 cggattgtac gcgcgctttg atgcccaaag tttcaaatgc gtctttgagt gccaacgcgt
     1981 tcattacggt tgccatcatg cccatgtagt cggcggtggc gcggtccata ctgcctgctt
     2041 gtgcagatac gccacggaaa atgttaccgc cgccgacaac gataccgacc tgcacgccca
     2101 ttttaacgac ttcggcaatt tcgccgacag tttgaacgat ggtatcgtga ttgatgccga
     2161 acggatcgga acccatcagg gattcgccgg agagtttcag taatacgcgt ttgtatttga
     2221 tttgctgtgt catgggatat tctgctttct cgttggggat gttgccggct tccgggcggg
     2281 atgccgtctg aaaggtgtat gccttggcag ggcgtatgcg gcgtgccggc ggtgtgaaaa
     2341 cgggctgctg aatttgccgc cgctgttttc gggcggggcg ggcatttgaa ccctgccgcc
     2401 ggaaaatatg ggcctttccc aaaaaaaagc accctgattc gtttggaatc caggtgcttt
     2461 ctttttcata agtgccttac actttggcgg cagcggctac ttctgccgcg taatcgacgg
     2521 cttttttctc gataccgtcg cctactttgt agcggacgaa gctgaccact tcagtgccgt
     2581 tttctttagc gaattgggca acagtttggt cggggttcat cacgaacgct tggccgttca
     2641 gagtgatttc agccaagaat ttgcggatac ggccttcaac cattttagcg gcgatgtcgg
     2701 caggtttgcc ggaagcgata gcttgttcag tgtagatgtg gcgttctttt tcaacggttt
     2761 cagcatctac ttcggcttca cttacgcatt gtggtttagc ggcaacgatg tgcataccga
     2821 ttttgcgtgc tacgtcttca gagcctttgt actcaaccaa tacgccttcg gtagccaaag
     2881 caccgtggat gtaggcaacc agttggttgg cagtgtcgat cacttggaag cggcgaacag
     2941 acatgttctc gcccaattta gcgatgatgg ctttacgttc tgcttcaacc agttcgctca
     3001 gttcttcaac ggtagccggt tttttctcgg cagcggtttt agcaacgaag ttggcaaatt
     3061 ctacgaagcc cgcgtctttg gcaacgaagt cggtttcgca gtttacttcg accaatgcgc
     3121 cgacattgcc gttgatggcg taagctaata cgccttcggc agcggtacga ccggccagtt
     3181 taccggcttt cgcgccggat ttgatgcgca ggatttcttc ggctttgtcg aagttgcctt
     3241 cagcttcaac caaggctttt ttgcattcca tcatgcccaa gccggtagcg gcgcgcagat
     3301 cggcaaccat ttttgcagta atttctgcca ttttgaatct cctagatttt tgggaaatac
     3361 ggaaaggatt ttccgcattc gggaatcgtg tgccgcgaac ggacgttcag acggcatatt
     3421 tgagaaaagg ggcataacgc ccctcttctg tacaccgaat tactcggcag cagcttcttg
     3481 ggcagcggct acagtttctt gcagcgcttg gtttttgcct tccaaaactg cgtcggcgat
     3541 gccgcggcag tacaggcgga tggctttggc ggagtcgtcg ttgccgggga taacgtattt
     3601 cacgccgtca gggctgttgt tggtatcgac tacggcgata acggggatgc ccaatttctc
     3661 agcttcgacc agagtacctt tttggtagcc ggtatcgata acgaaaatcg cgtcaggcag
     3721 gcctttcatg tttttgatac cgcccaaaga acgttccagt ttttcaacgt cgcgttgcat
     3781 ttccagaatt tcttttttgt tgaaaccgcc ttcagcagcg ttttccaggg cagcagtttt
     3841 ttcttccagg cgtttgatgg attgcttaac ggttttgtag ttggtcagca taccacccaa
     3901 ccagcggtaa tcaacgaaag gcataccggc acgggtagct tcttcgcgga tgatgtcgcg
     3961 ggcttggcgt ttggtaccta cgaacaatac tgtacctttg ttggcaacca gacgacgtac
     4021 ggcttcttgc gcctcttgga acatcggcag ggttttttcc aagtttacga tatggatttt
     4081 gttgcgcgca ccgaaaatgt attgtgccat tttcgggttc caaaaacggg tttggtggcc
     4141 gaagtgaaca ccggcttcaa tcatctgacg catagtaatt tgagacattt tatttccttg
     4201 aaagggttaa gagcacacat tcaatcgcat agaacttgat aggtcacgcc tattgtcaag
     4261 cacccttcgg cgaaagtggg cataagtttt aaaaaatagt gtgtttccga aatggaaaac
     4321 tgacggatta tagcggataa gatgccgtct gaaaagggat tcagggtttt gtgccgctgt
     4381 ctttttgccg ttgtgcgcgc tgctgttcgg attccgcctg ttcctgctgc ctcatcaggt
     4441 ggttgcggcg gcggacggta atggtgaaaa ccgtgaacac ggtgggcagc accgcccaaa
     4501 aaaccaaata aatcaaggcg cgcgcaatac tcggctgcgc ggcggaatac ataacggcaa
     4561 caaaaagata gccgatggcg acgatgtgcc acattgtgtg cgtcctgttt gaatgttaac
     4621 aaaatcgtta taatcgcaat attctaccgc aatcctgaaa ggccgtctga aatgaggaac
     4681 gaggaaaaac gcgccctgcg ccgcgaattg cgcgggcggc gttcgcaaat ggggcgggac
     4741 gtgcgggcgg cggcaacggt aaaaatcaac cacctgctca aacgttatat taaaaaaggg
     4801 cggaaaatcg gcgtgtattg gccgatgggc aaggaattgc gtttggacgg ctttgtccgc
     4861 gcggcgcaaa aacgcggtgt aaaactttat ctgccttata tcgaaccgcg ttcgcggcgg
     4921 atgtggttta cgccgtatcc tgaaagcgga atggaacggg agcgcatacg gggcagggcg
     4981 aagttgaacg tgccgcagtt tgcagggcgc aaaatccgcg tgcacggttt gtcggtattg
     5041 ctcgtcccgc ttgtcggcat agaccgcgaa ggctaccgct tggggcaggc aggcggctat
     5101 tacgatgcga cgcttgcagc gatgaaatac cgtttgcagg caaaaaccgt gggcgtgggc
     5161 tttgcctgcc aactggtcgg cacgctgccg cgcgaggcgc acgacctgcc gctggacggt
     5221 tttgtgtcgg aggcggggat attgtgtttt tagccgttca gacggcattt cgggcggaaa
     5281 tgccgtctga aggcggaata ttgggagaaa aggatgtcgg aaaagataat actgccggtc
     5341 ttgtcattgg gcggcgttcg gctcgaaccg ttggatgtgc atcatgaaac gggtttgcgc
     5401 gaggcggttt gcgatgggga ggtttggaag ctgggggtaa cgtccgcgcc ccatccggat
     5461 agggtggcag actatatcgg gacagcattg gcaacgcgtt tggcgtttgc ggttgtcgat
     5521 gaagaggcgg gcagggtggt cgggacaacg gcgtattatc attttgaacc gcagattccg
     5581 cgtttggata tcggattcac atggtatgcg gcatcggcac ggcggacacg gataaacacc
     5641 tgttgcaaaa tcatgctgtt ggattacgca tttgatgttt tggcttgccg ttgcgtggga
     5701 tggcgcacgg atattctgaa ccttgcctcg caacgtgcca tcgaacggct gggtgcggaa
     5761 aaagacggcg tgctgcgtat gcatatgctc cgtaaagacg gcagtgtgcg cgatacggtc
     5821 gtgtacagta tgctgaggga agattggtgc aaaaacaggg aaatcctgac cggcaggttg
     5881 gcagggtatg gcgtgcaggt gtgaggcagt attttcaaat ttatagtgga ttaacaaaaa
     5941 ccagtacggc gttgcctcgc cttagctcaa agagaacgat tctctaaggt gctgaagcac
     6001 caagtgaatc ggttccgtac tatttgtact gtctgcggct tcgtcgcctt gtcctgattt
     6061 ttgttaatcc actataaaaa acttaacgca atatgctgac aatcttttaa aaattaatat
     6121 ataaacaatt ttgatttttt atctattaaa aatttgatat atatagataa ataactattt
     6181 ttatttttca tttcgcagtt tcccgacttg gcgggcgaca gaaaaacttt gcatttccca
     6241 gtaaaatcca ctacattcac gataacatat tacaagcccc tgaagcggtg tcggaagcca
     6301 tgcttgcaac gcattccaac cccgaaacag catactcgga cacacaccat tgccggtttt
     6361 ccctgctttt gcgattcagg cgtttgtagt acggcaaata accataaggg cagaagatgc
     6421 ctgtttttta ggagtaaacc atggctgaag cgacagacgt tgtcttggtg ggcggcggca
     6481 ttatgagcgc gactttgggc gttttgctca aagaactcga accgtcttgg gaaatcaccc
     6541 tgattgaacg cttggaagat gtggcgttgg aatcgtcaaa cgcgtggaac aacgccggca
     6601 cggggcattc cgcgctgtgc gaattgaact atgcgccgtt gggtgcaaat gggattatcg
     6661 atccggcgcg cgccctcaat attgccgaac agtttcatgt cagccgccag ttttgggcga
     6721 cgctggtcgc ggaaggcaag ttggaagaca attccttcat caatgccgtg ccgcatatgt
     6781 ctttggtgat gaatgaagac cattgttctt atcttcaaaa acgttatgac gcgtttaaaa
     6841 cccaaaaact ttttgaaaat atggaatttt ccaccgatcg gaacaaaatt tccgattggg
     6901 ctccgctgat gatgcgcggc cgggacgaaa accaacccgt cgccgccaac tactccgccg
     6961 aaggcacgga tgtcgatttc ggacggctga cgcgccaaat ggtgaaatat ttgcagggca
     7021 agggcgtaaa aaccgagttc aaccgccacg tcgaagacat caaacgcgaa tccgacggcg
     7081 cgtgggtgct caaaaccgcc gatacccgca accccgacgg gcagctcacc ctccgtaccc
     7141 gcttcctctt cctcggcgcg ggcggcggcg cgctgaccct gctgcaaaaa tccggcatcc
     7201 ccgaaggcaa aggctacggc ggcttccccg tgtccggcct gttcttccgc aacagcaacc
     7261 ccgaaaccgc cgaacaacac aacgccaaag tgtacgggca ggcttccgtc ggcgcgccgc
     7321 cgatgtccgt cccgcacctc gacacacgca acgtggacgg caaacgccac cttatgttcg
     7381 gcccttacgc aggcttccgt tccaacttcc tcaagcaagg ctcgcttatg gatttgccgc
     7441 tgtccatcca tatggacaat ctctatccta tgctgcgcgc cggctgggcg aatatgccgc
     7501 tgaccaaata cctgctgggc gaattgcgta aaaccaaaga agaacgcttc gcctccctgc
     7561 tggaatacta ccccgaggca aaccccgacg actgggaact catcaccgca gggcaacgcg
     7621 tccaaatcat taaaaaagac tccgaaaaag gcggcgtgct ccagtttggt acggagattg
     7681 tcgcccacgc cgacggctca ctcgccgcat tgctgggcgc gtcgccgggc gcatcgaccg
     7741 ctgtgccgct gatgatccgg ctgatgcacc aatgcttccc cgagcgcgcc ccgtcttggg
     7801 aaggtcgtct gaaagagctg gtaccgggtt acggcatcaa gttgaacgaa aaccctgaaa
     7861 gggcggatga aattatcgcc tataccgcga aagtgttgga tatttaagcc gaatctttca
     7921 agaaaagccg tacccccata tggtgttgat gccgtccctg ccggttatgc ccttcatccg
     7981 gcagggcagg ttttggtaca cggggcaggt aatcgttttt tcccttttgt gaataatgga
     8041 acagtcaaaa aacagcgttt tcatttctga aaacgctgtt ttttgttgcc tgattaacgt
     8101 ggggaacagt ctttgaagac gatttggttg tcaggtgcgg taatcataat gggctgtttg
     8161 cggtaggatt taccatccat cacgccggta cccaaaacat aaccgccttc tttgccgtag
     8221 aatgtttcca cattgtcgga tttgtccaaa ttgacaggca tttgcacgcg tttgccgttg
     8281 atgacggcgg aagcgtatgt ggtcaggccc tgtttgttga agccgtaggt tactttgact
     8341 tttttacctt gctggcagac gtagctgacg gtttttttgg caacggtggg gttgttcgtg
     8401 ccggcagcag cagccatact gctgagcgcg attgcggaag acaggattgc ggtggtcaga
     8461 agtttcattt ttattccttt ggatggatgt ggagtttgcc cgtttcgagc tgtttgacat
     8521 tctaatgtcg gcgtatcctg aaataaacag gaaattggat aaagtttgta aaaaggcggg
     8581 ttcgggcggt tcggcggttt gaggcagggg cggcaggcgg gatacggcgg cctgtccggt
     8641 gtttcagacg gcattgtttg cgtttttcgg aaatgaaaaa ccttcgggca tccggaggtt
     8701 gcggtttaac tttgtttttt tctttcggac ttggtctgtt tggacaattc ggcatacagg
     8761 tcgggatggt gttttttcaa cagggcggcg atttccatat cttttttgtt gactttcgcc
     8821 aaatcgatgc attcgatatg gacgaggcgg agcagttcgc gtacgggttt gggcattttg
     8881 cggccggttt cgtagcgcga gcctccagac tgggtaacgc cgaccttgcc ccagaagtct
     8941 atctggttca gcccggtctt tttacggatg gctttaacat cttctatatt ttcaaatatt
     9001 ttcataaaac ttcctttaag tttgtctggt tgcggggcaa attccgattt gctttgtttt
     9061 cgtaatgtgc cgggtcaagc ctgtttttat attatatatc atatctgccg tttctttcag
     9121 acggcattgt ttgtttttat ggggcggata cgtccggttt cagggtttgc cggaggcggg
     9181 gctgacggtg aggatttcgt agccggtttc ggtcaccaag acttcgtgtt cccattgggc
     9241 ggagagggag cggtctttgg taaccaccgt ccagccgtcg ttgaggatac gcaggtggcg
     9301 tttgccttgg ttgatcatcg gttcgacggt aaaaatcata cccggtttta gaacggggcc
     9361 ctgtcctttt tttccgtagt gcaacacttg cggggcttcg tggaaaccgc gcccgatgcc
     9421 gtgtccgcag aattcctgta cgacggaata gccggcgttt tcggcaacct gttggcaggc
     9481 gtaacctacg tcgcccagtg tcgcgccggg tttgacggct tctatgcccg ccatcatgga
     9541 ggcgtgggtt acgtcgatca ggcgttgggc gatgggggag actttgccga cggtaaacat
     9601 acggctggag tcgccgtgga agccgtcttt tttgatggtg aggtcgatgt tgataatgtc
     9661 gccttctttg agcggcttgt cgtcgggaat gccgtggcag atgacgtggt tgacggaggt
     9721 gcagcaggat ttggggtagg gcgggttgcc gtagtgcagg ggggcgggat agccgccttg
     9781 gacgttgacg tggtagtcgt aaacgagttt gtcgatttcg tcggtggtta cgccgggttt
     9841 gacgaattgt ccgatgtagt cgagggcttc ggcgacgagt ttgcccagct cgcgcatttt
     9901 ttcgatttct tcgggggttt tgatgatgat gccgttcata atgcttcctt ggattgcggg
     9961 tgtgcctgcc gtgccgggtc agaagaggtt gtcgagaatt tctttatggg gtttgggcgg
    10021 cgtgtttttc ggggtgtccg gtttggtatg gttttctttg ggcgtttctt tttctttggg
    10081 cgtttctttt tctttgggtg tttctttggg ctgcgcctgt ttttcgggtg tttcttttcg
    10141 gggttcggga cgggggacgt ttgtgggcag tacgggggtt tctttgagtg tgttttcagc
    10201 ttgtgttccg gcgtcgtccg gctgcctgtc ggtttgagct gtgtcggcag gttgcggttt
    10261 gacccggttt ttcttgggtg cggcagggga cggcagtccg ctgccgcttt cgtctgtgcc
    10321 gtccggctgt gcgggttcgg atgaggcggc gtggtggtgt tcgggttggg cggcatcttg
    10381 tccgactacg ccgtttggca gccagaattc ggtttcgcgg gggctgtcgg tgtgttgcgg
    10441 ttcggtttgg agggttttgc cgccgttcgg gttgaatgtg ctgacgatgc ctattgccaa
    10501 tgcgccgatg gcggtgatac agatgagcaa tacgacacgt atcaggagtt tgggggtcag
    10561 cctgaagggt ttgttcggtt tttttgccat tttgattgtg cttttggggt gtcgggcaat
    10621 gccgtctgaa ggcggttcag acggcattgc cgagtcagcg ttggacgtag ttttggtaga
    10681 gggtgatgac tttttgtacg ccgacggtgg tgctgacttt ttgggtaatc tgcgcctgtt
    10741 cttcgggggt gaggatgccc ataacgtagg ttacgttgcc gtaggtaacg attttgacgc
    10801 gcgcctgtgt ggcggggctg atgcccaaca gcgtggcgcg gactttggat gtgttccaag
    10861 tgtcgccggc gatgtcgccg gcagtgcgcg gcagggaggc gacggtaatg tagttgtata
    10921 cgccttcggc ggcctgttcg gaacgtgcaa tctgaccgac gaactgtttc tcgccttcgg
    10981 tggcgacttg tccgagcagc agcaggtggc ggttgtagcc gacaacggag atttggggcg
    11041 tgtagccttt ggtttggttg ttttggcgca gataggagcg ggcggtggtt tcgatacgca
    11101 acgccataac gttgtcgtcg gtttgcgcgc cggtggttcg gcggtcgacg gcggatttcg
    11161 cgccgacggc ggcgcttccg attactgcgc tgacgcagcc gctaagggca aggctgaaaa
    11221 tggcggcaat cagggtgcgg acggtgtgcg gtttgggttt catcgggtgc ttcctttctt
    11281 gggcgtttca gacggcattg ctttgcgcca tgccgtctga aaagggttac attccttcca
    11341 gcagtacgga gtcgatacag tcgcacatgg cgtgtatcag caggatgtgg ttttcttgaa
    11401 tacgggcggt gcgcggatgg ggaacgttga gcaaaacgtc ggtgtctttg agtatggcgg
    11461 cgattttgcc gccgtcgcgg ccggtcaagg cgatgacgtg catatcgcgt tcgtgtgcgg
    11521 ctttgacggc ttcgatgacg ttggcggaat tgccggaggt ggaaatgccg accaatacat
    11581 cgcctgcacg tccgagcgcg cgcacctgtt tgctgaatac gtggtcgaaa ccgtagtcgt
    11641 tgccgatggc tgtcagcgcg gaagtgtctg ttgtcagcgc gacagcggcg agttccatgc
    11701 gttctttttc aaaacggccg gtcatttcgg cggcgaagtg ttgcgcgtcg gcagccgaac
    11761 cgccgttgcc gcaggccagg attttgccgt cattcatcag gcattgcagc atcagctcgg
    11821 cagcctgtac ggtcggctcg accaatactt ttccggcttc ctgcttggca cggatgcttt
    11881 cggcaaaatg ggcggcaacg cgttcttgta atgtcgtcat atcgtcaacc tgtaatattc
    11941 tgtatccact cgggcgggcg gctgccttcg atgagtaccg cgtcgaggcg gcacggtacg
    12001 tttgtcaacc tgttctgttg cagataatac tctacacttc gttgcagttt caataatttg
    12061 gatggggaaa tgctgtatgc ggcaccgccg aattgccgat ttttgcggta ttttacttca
    12121 acaaacagaa tcatgccgcc gtttttgaca atcaggtcga tttcgccgta ggcgcagtgc
    12181 cagttgcggg caagcagtgt gcagccttgg gattggagga aggcaagcgc ggcatcttcc
    12241 cctgcctcgc cctgtttgtg gtttaggcgc ataatcggtt taacctttat aatgtttgtt
    12301 tttcagacgg cattcttatg tttcagaaac atttgcagaa agcctccgac agcgtcgtcg
    12361 gagggacatt atacgtggtt gccacgccca tcggcaattt ggcggacatt accctgcgcg
    12421 ctttggcggt attgcaaaag gcggacatca tctgtgccga agatacgcgc gttaccgcgc
    12481 agcttttgag cgcgtacggc attcagggcc aactcgtcag cgtgcgcgaa cacaacgaac
    12541 ggcagatggc ggacaagatt gtcggctatc tttcagacgg catggttgtg gcacaggttt
    12601 ccgatgcggg tacgccggcc gtgtgcgacc cgggcgcgaa actcgcccgc cgcgtgcgtg
    12661 aggtcgggtt taaagttgtc cctgttgtcg gcgcaagcgc ggtgatggcg gctttgagtg
    12721 tggctggtgt ggcgggatcc gatttttatt tcaacggttt tgtaccgccg aaatcgggcg
    12781 aacgtaggaa attgtttgcc aaatgggtgc gggcggcatt tcctatcgtc atgtttgaaa
    12841 cgccacaccg aatcggggca acgcttgccg atatggtgga attgttcccc gaacgccgat
    12901 taatgctggc gcgcgaaatt acgaaaacgt ttgaaacgtt cttaagcggc acggttgggg
    12961 aaattcagac ggtattgtct gccgacggca accaatcgcg cggcgagatg gtgttggtgc
    13021 tttatccggc gcaggatgaa aaacacgaag gcttgtccga gtccgcgcaa aacatcatga
    13081 aaatcctcac agccgagctg ccgaccaaac aggcggcgga gcttgccgcc aaaatcacgg
    13141 gcgagggaaa aaaagctttg tacgatctgg cactgtcttg gaaaaacaaa tgatgccgga
    13201 cggaccggca ccatagtgcg aacggaatca acggacacgc cccgtcatgc ggtacagcac
    13261 gtctttgcct tgaacacggt ggacgacgac catggcgacg tgtccgacga cggcggcaaa
    13321 cagcagccag cccaaattgc cgtggaacgt gttgcccaag tttgccatcc actcgatttt
    13381 ttccggcgaa ccctgcatca cttcaacgcc gaacactttc aacgggccgc ggccgctgcc
    13441 gtattggcgg atcatgccga taacgggaac ggcaagcatg agcagataca gaatgccgtg
    13501 tcctgccgcc gcagccttgc tgtcgctttg cggacgcttg gcgcggttgg caaccgccca
    13561 cacgatgcgc aatgtaatca ccgtcagcgt aaggaaaccg aaagatttgt gcaggccgaa
    13621 caggctgccc acccattccg cctcttcgta tagtggatta acaaaaacca gtacggcgtt
    13681 gcctcgcctt gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg
    13741 ttaatccact ataaatcgtc cacaggacaa tggtggtcgg aatgccgatg aaaccggcaa
    13801 cggtcagcca gtgcagcgta cgtgtcaacg ggtcgtaaac ggcaggttgg tttgtgttca
    13861 taaaaaactt aggggctgtc ctagataact agggaaattc aaattaagtt agaattatcc
    13921 ctatgagaaa aagtcgtcta agccggtata aacaaaataa ac
//
LOCUS       DBBZYD010000052        13688 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.052, whole genome shotgun sequence.
ACCESSION   DBBZYD010000052 DBBZYD010000000
VERSION     DBBZYD010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13688
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.052"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(362..697)
                     /locus_tag="ACJJDL_001275"
     CDS             complement(362..697)
                     /locus_tag="ACJJDL_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HGG7573993.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARDKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(777..2900)
                     /gene="dnaX"
                     /locus_tag="ACJJDL_001276"
     CDS             complement(777..2900)
                     /gene="dnaX"
                     /locus_tag="ACJJDL_001276"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HGG7573994.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYAPPALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAEQDVRQMIGAVDKQYLYELLTGIINQDGAALTAKAREMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHRLAQTIGGEQIQLYYQIAVHG
                     KRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPEAETAQTPVQTASAAAMPSESKTAEPVTNQENNDVPPWEDAPDEAQTAAGTT
                     AQASAKSIQTASEAETSPDNQVSKNKAADNETETSLSEVPSENPIQATPNDEAVETEA
                     FAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADAEEENNADEGSNDENNTP
                     SAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARATAD
                     KKRLDKIRDTLAQAYGLQLTLQTQDWHDESGRETPAMQDKRVQAEDRQKAQALLEADP
                     AAQKILQAFGAQWQPESLELAANRP"
     misc_feature    complement(1672..1711)
                     /gene="dnaX"
                     /locus_tag="ACJJDL_001276"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            complement(2995..4971)
                     /gene="mutL"
                     /locus_tag="ACJJDL_001277"
     CDS             complement(2995..4971)
                     /gene="mutL"
                     /locus_tag="ACJJDL_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HGG7573995.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGSGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSEATEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPEQSLHERIAAIVGDDFQT
                     ASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVVSTPMPSENDSENLFDRASNYPTGNKSDTHNAFGSSGKTAPMP
                     YQSAYAPQQRSLSLRESRAAINTYAELYKKTDDIDLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGRLQSQRLLIPVTFAASHEECAALADYAETLAGFGLELSDMGGNTLAVRAAPAML
                     GKSDVVSLARDVLGELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            5114..5299
                     /locus_tag="ACJJDL_001278"
     CDS             5114..5299
                     /locus_tag="ACJJDL_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HGG7573996.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            5310..5978
                     /locus_tag="ACJJDL_001279"
     CDS             5310..5978
                     /locus_tag="ACJJDL_001279"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7573997.1"
                     /translation="MTTHLSNVAPDLQNYLNSIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPRYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            5978..6694
                     /locus_tag="ACJJDL_001280"
     CDS             5978..6694
                     /locus_tag="ACJJDL_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HGG7573998.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRPEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            6742..7227
                     /gene="purE"
                     /locus_tag="ACJJDL_001281"
     CDS             6742..7227
                     /gene="purE"
                     /locus_tag="ACJJDL_001281"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HGG7573999.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLNMELEQ
                     I"
     gene            complement(7410..8864)
                     /locus_tag="ACJJDL_001282"
     CDS             complement(7410..8864)
                     /locus_tag="ACJJDL_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HGG7574000.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACEII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8861..9562)
                     /locus_tag="ACJJDL_001283"
     CDS             complement(8861..9562)
                     /locus_tag="ACJJDL_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HGG7574001.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPTDLEENA"
     gene            complement(9559..10338)
                     /locus_tag="ACJJDL_001284"
     CDS             complement(9559..10338)
                     /locus_tag="ACJJDL_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HGG7574002.1"
                     /translation="MSVTIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPNMPRPKHIASFLLERTGGKA"
     gene            10622..12028
                     /locus_tag="ACJJDL_001285"
     CDS             10622..12028
                     /locus_tag="ACJJDL_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7574003.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIATDL
                     DESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFILGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRMYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTLS"
     gene            12140..13666
                     /locus_tag="ACJJDL_001286"
     CDS             12140..13666
                     /locus_tag="ACJJDL_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HGG7574004.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQAG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIESLL
                     "
BASE COUNT         2790 a         3694 c         3828 g         3376 t
ORIGIN      
        1 tgtggttttt cggttactgg attcccgcgt tcgcgggaat gacggggtgt aagtttctgc
       61 tcccacgggg ctggattccc gttttcatgg gaatgacgaa atttcagacg gcatttaagc
      121 ggtacggatg tgtaaataat ggtagggtgg gcttcagcct gccgattccc gctattcttg
      181 ccgtttttgc gttcttatca ttctcactgt ttttaccgtt cacgccgaat cctgcaaact
      241 gatgccgtca ttcccgcgaa ggcgggaatc tagacccgtc ggcacggaaa tttatcgagt
      301 aaaacggttt cttagattct acgttctaga ttcccgcctg cgtgggaatg acggtcgggt
      361 atcagcggaa gaagtcgccc actccggggg gtagaccttg cgtgaatgcg cccattgttt
      421 tgtttgcggt ttcttcggct ttgtcacggg cggatttgag ggcggcgagg atgaggtctt
      481 cgagcatttc tttgtcgtcg gcggcttctt gaatcaaatc ggggctgatg tcgattttgc
      541 gtacttcgtg cgcgcaggtc attgtgattt tgaccaagcc gttgcctgct tcgccttcga
      601 tttcggtttc ggcaagtttg gcttgtgctt ttttcatatt ttcctgcatt tgctgcgcct
      661 gtttcatcag gccgcctaat ccggcttttc cgaacatact gaatactcct gtctgttttg
      721 attgaataag ggaaacggca atgccgtccg aagggttcgg gcggcattat atctgtttat
      781 ggccggtttg ccgccaattc cagtgattcg ggctgccatt gcgcgccgaa tgcttggagg
      841 attttttgtg cggcggggtc ggcttcgagc aatgcttgtg ctttttgcct gtcttcggct
      901 tggacgcgct tgtcctgcat tgcgggggtt tctctgccgg attcgtcgtg ccagtcttgg
      961 gtttgcaggg tgagttgcag cccgtaggct tgggcaaggg tgtcgcggat tttgtcgagg
     1021 cgttttttgt cggcggtggc gcgtgcttcg gcggtcattg ccaaaaccat caggccggtg
     1081 tcgggatggt attccgtcca cgcggagtgt tgcgccggca tttgcgccgc gccgagtttg
     1141 cgggcgaaat gccggacgat ggctgcccag ttttcggtgg aaaactcggg cggcggggcg
     1201 gacggcgtgt tgttttcgtc gttgctgcct tcgtcggcgt tgttttcttc ttccgcatcg
     1261 gcaggggcgg cgtgttccca atccggcggc gggatttctg cgccgtcttc cggggggcag
     1321 tcattatccg gaaagccgta accgtagaaa ggttctgcag gggcttcgtg cgcaaatgct
     1381 tccgtttcaa cggcttcatc attcggtgtt gcctgaatgg ggttttcaga cggcacttcg
     1441 gacaaggaag tctcggtttc gttgtcggct gccttgttct tggaaacttg attgtcaggc
     1501 gatgtttcgg cttcggatgc cgtctgaatg ctttttgccg atgcttgcgc ggtcgtgccg
     1561 gctgcggttt gggcttcgtc cggcgcgtct tcccaaggcg gaacatcgtt gttttcttga
     1621 ttggtaacgg gttcggcagt tttgctttca gacggcattg ccgctgcgga tgccgtctga
     1681 acgggtgttt gggcggtttc cgcttcaggg cgcggttggg gcttttttgc ggcggtttcc
     1741 ttttcggcgg tttgtgccga tggggattga agttcggtat tttcaatcac ggcgtttgca
     1801 tcacacgaag ctgccgccaa gggcgcaaac gccagcatac gcagcagggt catcataaag
     1861 ccggcgtatt cgtcgggggc gaggcccaag tcgcgtttgc cgtggacggc gatttggtag
     1921 taaagctgga tttgttcgcc acctatggtt tgggcgaggc ggtgcaaaat atcggaatcg
     1981 gggtcgtcgt gcgccaaggc attcggcact gcctgtatca gggcgaggtg ttgcagcagt
     2041 atggcgagtt cgcccaaggc gttgtcaaag ccgacggcac acgccgccat ttcccgcgct
     2101 ttggcggtca gggctgcgcc gtcttggttg atgatgcctg tcagcagttc gtaaaggtat
     2161 tgtttgtcaa ccgcaccaat catttggcgg acatcttgtt cggcaacttt gcccgaaccc
     2221 agggcgatgg cttggtcgag caggctcaag gcatcgcgca tcgatccggc ggcggcgcgt
     2281 cccaaaagtt gcagggcggg gggggcgtag gcgatttttt cgctgtcgag gacgtgggca
     2341 aggtggtcgg caacctgctg cgcggtcata ttgcgtaaga cgaattgcag gcagcggctt
     2401 aatacggtaa cggggacttt gtgcggatcg gtcgtggcaa ggatgaattt gacgtgttcg
     2461 ggcggctctt ccagcgtttt gagcatagcg ttgaacgcgc ttttggaaag catatgcact
     2521 tcgtcgatga tatagacttt gtatttgccg gcggtcggcg cgtattgggc gttttccaat
     2581 acttcgcgga tgttgtcgat gcctgtgttg gaggcggcgt cgatttccag caggtcgaca
     2641 tagcgtccgg catcgatctg cgtacagctt tggcacacgc cgcaaggttc gccgtgttgc
     2701 gcgttttcgc agttgaggct tttggcaagg atgcgggcga tggtggtttt gcctacgccg
     2761 cgcgtgccgg tcagcaggta ggcgtggtgc agcctgcctt cgtccaaggc attttgcagg
     2821 gctttgacga cgtgttcctg accgactagg tcggaaaagg ttttgggccg ccattttcgg
     2881 gcgagaactt gataggccat gtttttctct tggtttcggt cgtgatgttt ctgtcggtgc
     2941 gtcggaatgc cgtctgaacg gcggtctcgg gcggcgtatt ctagcacttt cggcttactg
     3001 tccgcgcaag aacagtgcgt ccaattcttt caaagtcagt ttgacccaag tcggcctgcc
     3061 gtggttgcac tggttgctgc gcggcgtatt ttccatatcg cgcagaaggg cgttcatttc
     3121 gggcagggtg agccggcggc cggcgcggat cgagccgtgg caggacatag tggcgaggat
     3181 gcggttttcg tgttcttcga tggtttggct gctgccgact tgggcgagtt cgcccaatac
     3241 gtcgcgggcg agggagacga catcggattt gcccaacatt gcgggtgcgg cgcggacggc
     3301 gagggtgttg ccgcccatat cggataattc cagcccgaag cctgccagcg tttcggcata
     3361 atcggcaagg gcggcgcatt cttcgtggga cgcggcaaag gttacgggaa taagcaggcg
     3421 ttggctttgc agcctgccgt tttcctgccg ttggcgtttc attttctcgt agttgacgcg
     3481 ttcggcggca gcgtgcatat cgatgagcaa caggctgtct tcggcttggg caagaatgta
     3541 gatgccaagt aattgggcaa tggcaaaacc gagcggcggc agttcggatt gggacgggat
     3601 gccgtctgaa agcggcgtat ctgtttgggg agcaggcgtt tcagacggca tattgccgaa
     3661 acgtgcctgc tcgaatcggc ttaactcaag gtcgatgtcg tcggtttttt tgtagagttc
     3721 ggcataggtg tttattgccg cgcggctttc gcgcagggac aggctgcgtt gttgcggcgc
     3781 atatgcggac tgatagggca tgggcgcggt tttgcctgat gaaccaaagg cattgtgtgt
     3841 atctgatttg ttgcctgtcg ggtagttgga tgcgcgatca aacagatttt cgctgtcgtt
     3901 ttcagacggc attggggtgg agacaacgcc ggtaatgtca tgcaacactt cgcctgcgtt
     3961 gctgacgctt tcggtcaagt cggcgcgtgt gtcggcaagg gctttattga gcgtgtggaa
     4021 cacgagttgg tgcacctgcc ggctgtcgcg gaagcggatt tcggttttgg tcgggtggac
     4081 gttgacatcc acggcttcgg gcggcaggtc gaggaaaagg acgaaagcgg gggtgagggc
     4141 gttgtgcaaa acgtcgcggt atgcctgctt gacggcgtgg agcatcactt tgtcgcggac
     4201 aaaacgatgg ttgacgaagc agtattgttt gtcggttttg cctttggcga aagtcggctt
     4261 ggcaatcgcg ccatagagcc gcaatgcgcc gctgccgctg tcgatttcca aagatgccgt
     4321 ctgaaaatca tcgccgacaa tggcggcaat ccgttcgtgc aggctttgtt cagggagttt
     4381 gaacacttgt ttgccgtcgc gtttgagcga gaaggcaatg tgcggatgcg ccagcgcgag
     4441 gcgttcgagc atagtggcgc agtgggcgta ttcggtggct tcagacttga ggaacttgcg
     4501 ccgcgcgggg gtgttgaaga agagttcggc ggcttcgatg gtggtgccga cggggtgggc
     4561 ggcggcggtg gggctgctga gtttgccgtc ttcggctttg acttgggttg cgtgcgaact
     4621 gtcttcttga cggctggtca gggtcaggcg gctgacggag gcgatgcttg ccaagccttc
     4681 gccgcgaaag cccatgctgg caacgtgttc taaatcgttt aaggttttga ttttgctggt
     4741 agcgtgtcgg tggagcgcaa gctcgatgtc gtccggatga ataccgctgc cgttgtcgct
     4801 gacgcgaatc aggcggatgc cgccgcccgc cagctcgaca tcaatcgccg ttgcgcctgc
     4861 atcgatactg ttttcaacga tttctttcaa ggcgttggca gggcgttcga ccacttcgcc
     4921 ggcggcgatt tggttgacaa gatggtcggg cagggcggca atgcgtggca taaggtaggc
     4981 ttccgttgca aaaacgcttt attctataat aaaacccctt acttttctgc ctgtattctt
     5041 gataaaagcc gtttatcccg tttggaaaat accagtataa tcacgccgta tcccgtaaaa
     5101 ttggagcgca aagatgtatc actaccaatc cgaagccaca caattcctca accgcctgat
     5161 tgaagaaaaa cctgagttgg aacagcagcg tttggaaaac cgggggcttt tgtgggatgt
     5221 cgaactcaat cccgaagaac aggaaaactt cgaggcggca aaagtagcga aaaaacctta
     5281 tacctattac caagactgaa cccgccgaaa tgacgaccca tctgtccaat gtcgcaccgg
     5341 acctgcaaaa ctatctgaac agcatcggcg aacccgaaca tcccgttttg acgcggctgc
     5401 gtgagaagac cgagcatcac cgtatgggca aaatggcgat tgcgcgcgaa caggcggcgg
     5461 ttttggtttg gctggcaaag ctgattcgcg cggaaaaata tctggaagtc ggcgtgttta
     5521 ccggatacag cagcaccgcg cttgcattgg cgttgccaga acacgggcgg attaccgcct
     5581 gcgacatcaa tgtaaccttt accgatacgg cgcgtcaggt ttggaacgag gcaggtgtgg
     5641 cacataaaat cagcctgcac ctgcaacccg cattgctgac attggatgat ttgattgcac
     5701 agggtgaagc cggaagctac gatttggcac tgatagacgc agacaaaccg cccacgccgc
     5761 gatatttcga gcgttgcctc aagcttgtcc gtcaaggcgg catcatcgcc atcgacaata
     5821 ttttgctgaa cggaagggtg atgcgcgaag cggcttccga tgcgccgccc agcgtcggca
     5881 tcctcaaaga tttcaatcaa aacctgccga acgatacgcg gattgtcccc atcaccctgc
     5941 ccgtcggcga cggcttgacc ctgcttctga aaaaataatg aagaccaaat taccgctttt
     6001 tatcatttgg ctgtccgtat ctgccgcctg ttcttcccct gtttcccgca atattcagga
     6061 tatgcggccc gaaccgcagg cagaggcagg tagttcggac gctattccct atcccgttcc
     6121 cactctgcaa gaccgtttgg attatctgga aggcacactc gtccgcctgt cgaacgaagt
     6181 ggaaacctta aacggcaaag tcaaagcact ggagcatgcg aaaacacacc cttccagcag
     6241 ggcatacgtc caaaaactcg acgaccgcaa gttgaaagag cattacctca ataccgaagg
     6301 cggcagcgca tccgcacata ccgtcgaaac cgcacaaaac ctctacaatc aggcactcaa
     6361 acactataaa agcggcaggt tttctgccgc tgcctccctg ttgaaaggcg cggacggagg
     6421 cgacggcggc agcatcgcgc aacgcagtat gtatctgttg ctgcaaagca gggcgcgtat
     6481 gggcaactgc gaatccgtca tcgaaatcgg agggcgttac gccaaccgtt tcaaagacag
     6541 cccaaccgcg cccgaagcca tgttcaaaat cggcgaatgc caatacaggt tgcagcagaa
     6601 agacattgca agggcgactt ggcgcagcct gatacaggct tacccgagca gcccggcggc
     6661 aaaacgcgcc gccgcagccg tgcgcaaacg atagtttttc catttttccg ctttttaccc
     6721 catccgcacc aaggaggatt tatgatacaa atcggcatca tcatgggcag caacagcgat
     6781 tggcccgtta tgcggcaggc agcgcagttt cttgaagagt tcggcgtaga atatgaggcg
     6841 cgcgttgttt ccgcacaccg caccccggat ttgatgttcc aatacgccga aaccgcacgg
     6901 gcgcgcggca tcaaagccat catcgcgggt gcgggcggcg cggcgcattt acccggtatg
     6961 gttgccgcca agaccaccgt ccccgttttg ggcgtacccg tccccagcaa atacctgcgc
     7021 ggcgaagatt cgcttttatc gattgtacaa atgcccaaag gcgtacccgt cgccacattc
     7081 gccatcggcg aggcaggcgc ggcaaatgcc gcattgttcg ccgtttccat gctcgccaac
     7141 gaaacccccg aactggcgca aaaactggca gacttccgag ccaaacagga acaggctgtt
     7201 ttgaatatgg aattggaaca aatttaaaac ccaccgtctg cgaatatata gtggattaaa
     7261 tttaaaccag tacggcgtta cctcgccttg ccgtactatt tgtactgtct gcggcttcgt
     7321 cgccttgtcc tgatttttgt taatccacta tacaaatgcc gtctgaagcc ctgtttcggg
     7381 tttcagacgg catttttgcg aacaactttt tatgcctgtt ctttttggcg cattttttct
     7441 gccattagtt cgtgcaaggt tttcttcgcc ggtttcatcg gcacgcggtt ttgcgtccaa
     7501 cccaactgtt tgcgtggggt caggttgcgg aacttggtgg ctgcccaacc gaaggcgcgg
     7561 taggttttgc tgccgctgaa aataccgttg aatgtgcgcc acgccatttg ttcgccgaag
     7621 gtatgcgatg cgccttgccc tcggatgggg tgcggcacgg tttcggtcgg cgaacgttgc
     7681 gcttcaacac gcagacgttg catttgttcg gtaatcggaa tgcgtaccgg acaaacttca
     7741 acgcacgcgc cacacatagt acacgcagtc ggcagatcgc gtgtcgcatc caagcccaac
     7801 aaatgcggag agataatctc gccaatcggg ccgggataag tcgtaccgta agccgcacca
     7861 ccgatacggg tataaaccgg acagtggttc atacacgcac cgcaacggat acattgcaag
     7921 gtgcggcgca tttgatcttc tgcgtaagct tggctgcggc cgttgtcgag cagaaccaag
     7981 tgcatttctt gcggaccgtc taattcttca ctgcggcgcg ggccggtaat catattgaaa
     8041 taggttgtga tgttttgacc gatggcggag cgcggcagca gactgtacaa gggtgggatg
     8101 tcagacaatt tcgccaccac tttttcaatg ccggtaatag cgatatgcac gggcggtacg
     8161 gtggtactca agcgaccgtt gccctcgttt tccaccagac acagcgtacc tgtttcagca
     8221 acggcaaagt ttacgccact caaaccgaca tcggcagtgc tgtaaatatc gcgcagtgct
     8281 ttacgggcga agccggtcag ttggtctaca tcgtctgtca gcggcgtacc gaggttttgg
     8341 tggaacagtt cgctaacctg ttctttggtt ttgtggatag caggcatcac gatatgggtc
     8401 ggtttttcac ctgccatttg gacgatgaac tcgcccaagt cgctttccac cgctttaatg
     8461 ccttttgctt caagataatg gttcagctcg atttcctcgc tgaccatcga tttgcctttg
     8521 accatcagct tgccgttttt ggctgtgatg atgtcgtgga tgatttcgca ggcttcggcc
     8581 ggtgtttccg cccagtgtac ttttacgccc aacttggtca ggttttcttc cagctgctcc
     8641 agcagggcag gcaatttaga caatgagcgc tgacggacgt gttcgcacaa atcgcgcaag
     8701 ctttgcagct cttcttcgtc ggtcaaaaca gctttgcgtt tggtcatcag catatccatc
     8761 gcggtacgca ggcttttacg caaaggcttg tcttgaaggg aaattgcggc gttttgcttg
     8821 aaagtttccg gcttcatgtg aaatttgatg gtttgcgtag tcatgcgttt tcctccaaat
     8881 cggtagggga aatgtggtcg ggcaggatgg cgaggataac caaatcacgc ggaccgtgcg
     8941 cgccgtaagc aagcgtcagt tggatgtctg cggttttgga cggaccggaa atcaggaata
     9001 cattggtcgg cataccgttt tccaccagtt tttcgccttc gacggcatta tgaaactcgt
     9061 tgtacatctt ggacgtatcg aacaggcaga aatgcacggg cggaacgaga ctcaaagtac
     9121 gcggctcttc ggggctggaa aacagcatca gcgtgccggt gcgggcgatg ccgcattgcg
     9181 cgccgctgaa gcccgcatcg atgttcgtga aaaactcggt tttccaagta tcgatttcgc
     9241 gctcgaaggc aatcggttcg atattgctgt ccgccaatgc ggcacgggca atttgtccgt
     9301 gttcggtcgc caagggcagc aggatgtttt tcaaaccctt gccttctgcc gcttcgcgga
     9361 aaacctgcat ccaattgctt ttcgtcaccc aataaatttc ggttttgacc gcgcgcattg
     9421 cggcagccca atgtttcaga cgctcggctt cgctgcccca agaaacaccc atttcacggt
     9481 aataatcaaa aaccgcaggt tcttccatcg gcaatgcgtc ggcttttttc agttttgcca
     9541 aaatattttc gcgcgcgctc atgctttgcc tccggtacgt tccaacaaga aggatgcgat
     9601 atgtttcgga cgcggcatat tcggttcgtc cttagcaatt ttgccgccga tgttcatcat
     9661 acagccgcag tccgcgctga tgatttcggt tgcgccggtt tctttcagcg cggcgacttt
     9721 gtcggttacc atcgcgccgg aaatatcggc ttgtttgacg gagaatgtgc cgccgaagcc
     9781 gcaacattcg ctttcgtggt cgtggacgat gcgttcgacg ttttccatac cgtcaatcag
     9841 ttgccagccc gagagatgga cattcatttc gcggcgggcg gcgcaggaag tgtgaacggc
     9901 gactttgagc ggttcgccct tgtcttcggg tttgaaaccg atggcaagca ggaaatgggt
     9961 aaactcgatg atgcggccgg cgcaatccac agccctttcc tcgtactcgc tgcctttaaa
    10021 cagcgtcggc caatggtgct tcatcatacc gccgcacgaa ccggacggta cgacaatcgg
    10081 ccactcctcg gggaaaaggt cgagttgcgc tctggcgaca tcaaaggctt cggtcggatg
    10141 gccggatgaa taggcgggct gaccgcagca gctttgcgcc atcgggaaat ggacgcgtat
    10201 gccctgttgc tcgattaggg taatggcatc catgcctgct tcgggcataa aaagatcaag
    10261 gacgcaagtg ccgaaaaaat agacatcggt cggattgctg tcgtatcgga tgatttttgg
    10321 gggaatggtt acgctcatgt tttttgataa cgggaaaccc gtttttttct gtagaaaggt
    10381 aagcgtttac tttaagtaat tgactgttgc gggtcaagtc taattttaaa aaataatccg
    10441 gtttttctta caaactgccc cataacgctt actgtacctt actctgataa ttttcgataa
    10501 taattatcat tacaatgaaa tgccgattcg tttgcttgtg aacattcagg acgccgactc
    10561 tgacggcatt cagacagcat ctgaaaacaa taacggcaca aggatggggt acaatcgccc
    10621 tatggaaaaa aacaccctat ccgcccgcgc accatcccct tggctgccgc ttctgctggc
    10681 aattgccatt tttatgcaga tgttggatgc gaccatttta aataccgcac tgcctgaaat
    10741 tgccaccgac ctggacgaat cgcctctgga tatgcaactg gcagtcgttg cctatacgct
    10801 gacggttgcc ctgctgattc ctttgagcgg ttatttggcg gacaggttcg gaacgaaaaa
    10861 agtctttttc ggttcgattg ccgtttttat actcggatcg gcattgtgcg ccgcatcggg
    10921 ttcgctgttt gaattgacgc tttcccgtgt cgttcagggc atcggcggtt cgatgctggt
    10981 tccgataccg cgtctgacca tcttgcgtat gtacgacaag tccaagctgc tcaatgccat
    11041 caattatgcg gtcatgcctg cattaatcgg gccggtttta gggcctttgg cgggcggtta
    11101 tttggtcgaa tacgcttcgt ggcactggat tttcctgctc aacctgccca tcggtctgct
    11161 gggtttcata ttgggacgca acatcatgcc cgatattaaa ggcagcaata tctctttaga
    11221 cttcaaaggc tatctgattt tttctgccgc cgcgtgcctc ttgttacttt cggcagaaag
    11281 cctgtcgcac gcgctgcctc cgtattttgc actgttgccg ctgtgcggcg gactgctgtt
    11341 tgcacgccgt tatttccgac atatgaaaac cgcgtccaaa ccgatttatt ccgccgacct
    11401 gtttctgata cgcactttcc gtctaggact ggcgggcaat ctgttcagcc gtctcggcat
    11461 cagctcgatt ccttttctga tgcccctgat gtttcaagtc gctttcggct tcggcgcaag
    11521 cctgtcgggt tggctggtcg cccccgtcgc cctgtcttcg ctgctggtca aaccgctgat
    11581 tgcaccgctc atgaaacgtt tcggctaccg cacggtactg ctttggaaca ccaagctgct
    11641 tgccgccttc atcatgctgc tcgccctgcc tgacggaaac tcgtcgctgt ggatttggat
    11701 tttcctctcg ctggcgatcg gcgcgtgcaa ctccctgcag ttttctgcca tgaatacact
    11761 gaccctcgcc gatttgcgcc cgcaacagac cggcagcggc aacagcctga tggcggtcaa
    11821 ccaacagctt gccatcagca tgggcattgt tgtcggcgca ttaatcctta aaaactggac
    11881 atttctgata ccggcttctt caggtctgca ttccgccttc cgtatgaccc tgctcagcat
    11941 cggcggcatc acccttgcct cgtcgttggt tttcaagcgt ctgcacgttt cagacggcgc
    12001 aaacctgaca cggaacacac tgtcctaaag cggtccgcac gcaaaacttt tacccgtttc
    12061 aacgtttgga ttatgattcc gcacatccat gcgcgccaac cccaaaacac aggcaatgcc
    12121 gtctgaaacc atatccctga tgaaaacacg cagcctaatt tcccttttat gcctccttct
    12181 ctgttcatgt tcttcatggt tgcccccact ggaagaacgg acggaaagcc gtcatttcaa
    12241 tacttccaaa cccgtccgcc tggacaacat cctgcaaatc cggcacaccc ctcataccaa
    12301 cgggctatcc gatatctatc tgctgaacga cccccacgaa gcctttgccg cccgcgccgc
    12361 ccttatcgaa tctgccgaac acagcctcga tttgcaatac tacatctggc gcaacgacat
    12421 ttccggccga ctgctgttca acctcgtgta ccttgccgca gaacgcggtg tgcgcgtacg
    12481 cctgctgttg gacgacaaca acacgcgcgg attggacgac ctcctgctcg ccctcgacag
    12541 ccatcccaat atcgaagtgc gcctgttcaa ccccttcgtc ttacgaaaat ggcgcgcact
    12601 cggctacctg accgacttcc cccgcctcaa ccgccgcatg cacaacaaat cctttaccgc
    12661 cgacaaccgc gccaccatac tcggcggacg caatatcggc gacgaatact tcaaagtcgg
    12721 tgaggacacc gttttcgccg acctggacat cctcgccacc ggcagcgtcg tcggcgaagt
    12781 atcgcacgac ttcgaccgct actgggcaag ccattccgcc cacaacgcca cgcgcatcat
    12841 ccgcagcggc aacatcggca agggtcttca agcactcgga tacaacgacg aaacgtccag
    12901 acacgcgctc ctgcgctacc gcgaaaccgt cgaacagtcg cccctctacc aaaaaataca
    12961 ggcaggacgc atcgactggc agagcgtcca aacccgcctc atcagcgacg accctgcaaa
    13021 aggactcgac cgcgaccgcc gcaaaccgcc gattgccggg cggctgcaag acgcgctcaa
    13081 acagcccgaa aaaagcgtct atctggtttc accctatttc gtccccacaa aatccggcac
    13141 agacgcacta gcaaaactgg tgcaggacgg catagacgtt actgtcctga ccaactcgct
    13201 acaggcgacc gacgttgccg ccgtccattc cggctatgtc aaataccgaa aaccgctgct
    13261 caaagccggc atcaaactct acgagctgca acccaaccat gccgtccctg ccacaaaaga
    13321 caaaggcctg accggcagct ccgtaaccag cctgcacgcc aaaaccttca ttgtggacgg
    13381 caaacgcatc ttcatcggtt cgttcaacct cgacccccgt tccgcgcgtc tcaacaccga
    13441 aatgggcgtt gttatcgaaa gccccaaaat cgcagaacag atggagcgca cccttgccga
    13501 taccaccccc gaatacgcct accgcgttac cctcgacagg cacaaccgcc tgcaatggca
    13561 cgatcccgcc acccgaaaaa cctacccgaa cgaacccgaa gccaaacttt ggaaacgcat
    13621 cgccgcaaaa atcctatccc tgctgcccat agaaagttta ttatagaaat atagcggatt
    13681 aacaaaaa
//
LOCUS       DBBZYD010000053        13675 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.053, whole genome shotgun sequence.
ACCESSION   DBBZYD010000053 DBBZYD010000000
VERSION     DBBZYD010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13675
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.053"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(266..688)
                     /locus_tag="ACJJDL_001287"
     CDS             complement(266..688)
                     /locus_tag="ACJJDL_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HGG7574005.1"
                     /translation="MALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEE
                     RYKLSRSEFEQLWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKVSEL
                     ACKTVETEARLEELYNRKKALIDEMVREADKKELPKRL"
     gene            complement(831..2477)
                     /gene="pgi"
                     /locus_tag="ACJJDL_001288"
     CDS             complement(831..2477)
                     /gene="pgi"
                     /locus_tag="ACJJDL_001288"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG7574006.1"
                     /translation="MKHFHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGSQKHDSSTERLINLYLQTNRK"
     gene            complement(2598..3446)
                     /gene="hexR"
                     /locus_tag="ACJJDL_001289"
     CDS             complement(2598..3446)
                     /gene="hexR"
                     /locus_tag="ACJJDL_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HGG7574007.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            complement(3496..4482)
                     /locus_tag="ACJJDL_001290"
     CDS             complement(3496..4482)
                     /locus_tag="ACJJDL_001290"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HGG7574008.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            complement(4463..5158)
                     /gene="pgl"
                     /locus_tag="ACJJDL_001291"
     CDS             complement(4463..5158)
                     /gene="pgl"
                     /locus_tag="ACJJDL_001291"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HGG7574009.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            complement(5438..6883)
                     /gene="zwf"
                     /locus_tag="ACJJDL_001292"
     CDS             complement(5438..6883)
                     /gene="zwf"
                     /locus_tag="ACJJDL_001292"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HGG7574010.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWANNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
     gene            7399..9234
                     /gene="edd"
                     /locus_tag="ACJJDL_001293"
     CDS             7399..9234
                     /gene="edd"
                     /locus_tag="ACJJDL_001293"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HGG7574011.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVTGELNVLINEAE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            9415..10053
                     /locus_tag="ACJJDL_001294"
     CDS             9415..10053
                     /locus_tag="ACJJDL_001294"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HGG7574012.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     HNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            10068..10286
                     /locus_tag="ACJJDL_001295"
     CDS             10068..10286
                     /locus_tag="ACJJDL_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574013.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(10310..11255)
                     /locus_tag="ACJJDL_001296"
                     /pseudo
     CDS             complement(10310..11255)
                     /locus_tag="ACJJDL_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            11418..12458
                     /gene="mutY"
                     /locus_tag="ACJJDL_001297"
     CDS             11418..12458
                     /gene="mutY"
                     /locus_tag="ACJJDL_001297"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HGG7574014.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            12875..13435
                     /gene="sodC"
                     /locus_tag="ACJJDL_001298"
     CDS             12875..13435
                     /gene="sodC"
                     /locus_tag="ACJJDL_001298"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC"
                     /protein_id="HGG7574015.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPA
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
BASE COUNT         3185 a         3725 c         3448 g         3317 t
ORIGIN      
        1 caacgctgta tcggtttaaa tttaattcac tataaaaacg acaaaaacgc aaaagccgcc
       61 gacattcccg catccaagtt tcagtcaatc agataacctt ggatttcttt ggttttcgca
      121 ttgatttctc tggtacggca gtcagattgt gccacgccgt attcgtcgcc gtcggcgcat
      181 ttggcattca aaccgttttg tcagttgcgg tactcgggca tgacggtttc ggcaatatcg
      241 gcgggcagtg cctgaaccgc gctgttcaga gccgctttgg cagttctttc ttgtccgctt
      301 ccctgaccat ttcgtcgata agggcttttt tacggttgta cagctcttcc aagcgtgctt
      361 cggtttccac cgttttgcat gccagttcgc tgacttttat gccgtttggc gtttcacctt
      421 cggctttcgc attgttggca cagattttgt ccataccgct tttccatgtt ttctgtgagg
      481 cttgcagctt attctgtacg gtttgaggca atcctttcca gagctgctcg aactcgctgc
      541 gcgacagctt gtagcgttct tcccattcgg atacgcggtc gacttcctgc tcccgaccca
      601 atgcctcctg cgccgccgct tcttctgccg cttcaagttc ttcgttcctt tgtttcgctt
      661 tgtccaacgg ctctttaatc agtgccatag ctgcggaaca tatatgttta aatttatgca
      721 aaccatcata tcgggattgc acacgctctg caagtttacc gacggttttc ctgttcgata
      781 aaaatgccgt ttgaaacggt cggcgttcag acggcatttt tccgcaggtt ttatttgcgg
      841 ttggtctgca ggtagaggtt gatcaggcgt tcggtcgagc tgtcgtgctt ttgcgacccg
      901 gtttcgccgg tcagttcgcc caaaatggtt ttagccagtt gtttgccgag ttccacgccc
      961 cactggtcga agctgttgat gccccaaatg atgccttgta cgaaggtttt gtgttcgtac
     1021 atggcaatca ggctgcccat attacgcggg ttgaccttgt ccatcaggat gaggttggtc
     1081 gggcggttac cggagaaggt tttgtgcggg accagctctt cgatgcgcgc ctcatccata
     1141 ccctgcgctt tgagttcggc gcggacttcg tcgggggttt tgccgcgcat aaaggcttct
     1201 gcttgggcga agacgttggc aagcaggatt tcgtggtgtc cgggcaggtt gctgcgtttt
     1261 tcaagcgagg caatcaggtc gatgggggta atgtgcgtgc cttggtgcag cagttggaag
     1321 aaggcgtgct ggccgttaat gcccgtttcg ccccagataa tcggcgaggt ttcgtgtccg
     1381 actgctttgc cgtccaacgt aacctgtttg ccgttacttt ccatatcgag ctgctggatg
     1441 aatttgggca ggcggtgcaa atgttggtcg taaggcgcga tgacgtggct gccgccgccg
     1501 tagtagttga tataccagat gccgatgagg gcgagaatga cgggcaggtt gcgctcgagc
     1561 ggtgtgttga tgaagtgttg gtccatcagg tgcgcgccgt tgagcatttc aatgaagttt
     1621 tcttcgccga gatacagcat aatcggcaat ccgatggcgg accacaggct gtaccgaccg
     1681 ccgacccaat cccaaaattc aaacatattg gcggtgtcga tgccgaattc ggcgacggct
     1741 ttttgattgg tggaaacggc ggcgaagtgt ttggcaacgg cttcttcgtc gcccgcatga
     1801 ttcaaaaacc attcgcgcgc ggtcagcgcg ttggtcagcg tttcctgcgt ggtaaatgtt
     1861 ttggaggcga tgatgaacag cgtggtttcg gggtggactt tggacaatac gtcgcgcagt
     1921 tgggagccgt ccacgttgga gacgaagtgc atattgaggc gcggatgacc gaaaggtttg
     1981 agcgcggtac acatcatcag cgggcccaaa tccgatccgc cgatgccgat gttgacaacg
     2041 tcggtaatga cttggttggt atagcccagc cagcttccgc tgcggacttc gtgtgcaaat
     2101 tcgcccatac gttgcaaaac gcggttgact ttgggcatca catcttcacc gtcaaccaca
     2161 atcggcgaat tggtgcggtt gcgaagggcg acatgcagga cggcgcggtt ttcggtggta
     2221 ttgatttttt cgccgtggaa catctgccgc atccgctccg gcacgcctgc ttctcgggca
     2281 agctcgaaca aaagcgacat ggtttcgtcg ttgatgcggt ttttggagta gtccagcgtc
     2341 agtccgccga cttgcagcca gtagcgttcc gcacgctgcg ggtcttgctc gaacatttcg
     2401 cgcatatgca atgttttgct gtcgtcaaag tggttccaca atttcgacca tgcgggtaag
     2461 tcgtgaaagt gtttcatcta tatgctcctg aatgaggttt tttgttgtgg gatgaaaagg
     2521 ctgctggaaa ctgccgcaag ccgccgacgg ccgttgttcg gcatttcaga cggcatttgt
     2581 gggatgccgt ctgaaggtca atctttgtcg taatcgatgt gcttgttgtg tatgcttttt
     2641 ttgcttttct gcaattgcag gctggcagca tcgcccaagc gcagggcaag tccgatggcg
     2701 agaatgtcga tgacggcaag ctgcaagagg cgggaaacca tgggcgtgta gagttcggca
     2761 ttttcctgtg tggcaacgct caacacgcag tcggcaagtt gcgccagagg cgaatcgttg
     2821 cgggtcagtg cgatgacgga cgcgccgttt tctttggcga tgctgaccgc atccaaaagt
     2881 tcgatagacg aacccgtgtt ggaaatggca accaaaacat cctgatcgct caaaacggat
     2941 gctgccatca gctgcgtgtg cgtatcgaca taggcgaccg tggacattcc gaaacggaaa
     3001 aacttgtgtt gcgcgtcctg cgcaacgata ccggaattgc cgacaccgta aaactcgacg
     3061 cggcgggcgt gcatcagcgt ggcaatggcg ttttccagct ccgactcttt caggaagcgg
     3121 cgttcgccca acagcgaggc ggcggcattg cccaacactt tctcgaccac gcttgccata
     3181 tcgtcgtcgg cgttgagttc ttcatggaca tagggcatac cctcatgacc gatgctggcg
     3241 gacaacgcga gcttgaactc gggcagccct ttataaccca agctgcggca gaatcggatg
     3301 acggtcggct ggctgacgga cgcacgttcg gcaatttcgg caacggcggc atggacgaac
     3361 catttgggtt ccgccaatgc acattcggcg actttgcgtt ccgcaccgga aaggtttgcc
     3421 agtgattcgc tgattttgct taacataatg atatgccctt cgataatgca gccccgctgc
     3481 aaggagccgc tgtggttaaa cgtttctcaa atggttgtcg agagccgcag ccgcaccaga
     3541 aattccggga aactcgctca agacgacata cacgggaatc gcggcaagat atgcttcaaa
     3601 cctgcccttg ttctcgaaac ggctgcggaa cggggaagtt ttgaaatatt ccaacacgcg
     3661 gggaataatg ccgccacaca ggtacacgcc gccgcgcgcg cccagcgtca gggcgaggtt
     3721 ggaagcaacc gtgccgagca tggcgcagaa gatgtccaaa gtctgacggc acaaaggcga
     3781 cgcgccgctc aaagcctttt ccgtgatttc agacggcatc agtttggcgg gtttggcttt
     3841 ctgttttgca gccaaagcct cgtaaaccaa gctcaagccc gcgccgctca aaaagcgttc
     3901 ggcggaaaca tggccgtatt tgtttttggc gtactgccaa atcagcactt ccatatcgtc
     3961 aaacggcggg aaactggtat gcccgccctc gcccgccaaa gccacccagc ctgcgtggct
     4021 gtgcaccaat ccgctcacgc ccaggccggt accggggccg ataacggctt tgggggcaaa
     4081 ttcgacaggc ttttgcccgc ctacctgcat caggtctttg cttgaagtct gcgttaccgc
     4141 caatgcctgc gcggtaaagt cgttcaaaag gatgagggtg tccagcccca aagtctgacg
     4201 ggtggtttcg atggaaaacg cccaatggtg gttggtcatc tgcacccagt cgcccaaaat
     4261 cgggttggcg atggcaaatg ccgcgtgccg tacggctgtt gcaccgcttt gattcagata
     4321 ggcacgcacc gcatcggtaa ccgtatcgta gtctttacac ggaagcacgg cggctttttc
     4381 aatgacgcgc ggcgcggttt ccagcgcaaa gcgtgcattc gtcccgccga tatcggcgac
     4441 cagtcgggga tatccggctt gtttattcgg cgtagaagac atggcagttc actccttgat
     4501 ggttcaaaac gaggttgatc ggatattcgc ggttttcgcc ttgtgcggct tggtcgaaca
     4561 cggctttttt ctcttcgccc cgtatcgcca aaaacacatg ccccgtatgg gcaatcgcat
     4621 ccaaggtcat actgacgcgc tcgtgcggcg cggtaacggg cgtggtatgc accagcgcga
     4681 cacctgccga accgtcgatt gccgtctgaa actgcggagc tttcgggaaa atcgaagccg
     4741 tatgcccgtc gtttcccata cccaaaacca aaacatcggg ctgtttgtaa tgtttcagtg
     4801 cataatcgac aacagcatcg ggatgtaatt cggtttcagt ttttccgtct tccaccatag
     4861 gaatccacat tgccgcttcc gctttgttct tcaacaggta ttcgcgcacc aaaccggtat
     4921 tgctgtcggc gtggacggtc ggcacgatgc gttcatctgc caaggtgatg ccgacgtttt
     4981 tccaatccaa atctttttgc gacagggcgt tgaaaaatgc aatcggcgaa cgtccgccgg
     5041 aaactgccaa caccgcaccg cccttctcgt ccagtgcgcc ctgcaaagca tccgccactg
     5101 cgtcagccaa agactgcgcc gcttctgccg cattttcgta ttcgtgccaa acaaacatat
     5161 ttgtgtcctt tttttatttc agacggcata ttccgttatg gaaacgggtt gagcaatatg
     5221 ccggtcgaac agttgtttat gcttttgata ccaaatatcg ggactgcttt ttatagtgga
     5281 ttaaatttaa accagtacag cgttgcctcg ccttgccgta ctatttgtac tgtctgcggc
     5341 ttcgtcgcct tgtcctgatt tttgttaatc cactatactg ctttacttgc gttcagacgg
     5401 catttcaaac cccatgccgt ctgaacgcat tattgtatta ctgctcttcg tgccacttgt
     5461 gtccgtcgcg cgccaatagt tcgcgcgcgg cttcaggccc ccacgagtgt gcgccgtagc
     5521 cgtgcggcgg cgtggtgtta tttgcccagt tttccaaaat cggcatcaca tattcccacg
     5581 cggcttcgag ttcgtcgcgg cggttgaaca aagcgagttt gccgttaatc acatccagca
     5641 gcaggcgctc gtaagcttcc gcgcggcggc cttccaatgc tttgcccaaa tcggttgcca
     5701 gcggcacggt ttcgacctta tttcctgccc ccggggtttt catctgcgta tagaggcgca
     5761 cggattcata tggttgcaac tcgataacga gccggttggg cgcggtgcga ctgccttcaa
     5821 aaatatggct gttcaaatct ttgaagttca aaacgatttc cgccactttg cccgccatgc
     5881 gcttgccggt acgcaggtag aagggaacgc ccttccagcg ttcgttttcg atttcggctt
     5941 taatggcgac gtaggtttcg gtaaagctgt cttgcggaac gttgatttct tcaagatagc
     6001 cgttcatgcc tttggcggcg gtatattgtc cgcgcacgac attttcattg acagattcga
     6061 cggtcagcgg cttcaatgac ttgatgactt tgactttttc atcgcgcacc gcgtcggcat
     6121 ccaagctggc gggggcttcc atcgcagtca tgcacagcat ctgcatcaaa tggttttgca
     6181 ccatatcgcg caacgcgccg gtaatgtcgt aaaactcgcc gcgctcttcc acaccgagct
     6241 gttcggcgat ggtcaactgc acgctttcga tgtatttatt gttccacagc ggctcgaaca
     6301 ttacattggc aaaacgcagc gcaagcaggt tttgcaggct ttctttgcca aggtagtggt
     6361 cgatgcggta aatttgccct tctttgaaat aacgcgcaac atcggtattg atttgctggg
     6421 aagaagccaa atccgtaccc aacggttttt ccaaaaccac acgcacgttg tcggcgttca
     6481 aaccgatttt ggcaaggttt tcacatgttt gcgcgaagaa tttcggcgcg gtggaaagat
     6541 agatgacgac attgtcggtt tctttgcgcg ctttgaccaa atcgcccaaa gcggcaaaat
     6601 cgtccggctg cgtaacatcg actttgagat atgcgagacg ttcgacaaac gatgcccaag
     6661 cctcatcgga aaaattttct ttcacatgga ttttggaact ggtttccacc ttcgccagaa
     6721 aaccttcggt atccaactcg ctgcggctga cccctaaaat acgcccttcg ggatgaagca
     6781 gaccggcaac atgcgcctgg tacagacagg gcaacagctt gcgcatcgcc aaatcgccgg
     6841 tcgcaccgaa caacaccaaa tcaaaatttg tttgtgtact catcgtatta tctcgtcagg
     6901 aaagaatttt tcgatgccgt ctgaaacctg tttcccccat cacgctgcat cgcaatatcg
     6961 gaaacaaagg caggcggcat aatgagtagt aatactacac accgctacac tttttgtcta
     7021 ttcccatttt tacaatttat ttgacctagt ccaaaaatcg ggcaggtttc ccctattccg
     7081 ttacaacaat cggaagattc tgcgatttaa atcaaatttc ttttcgatgt ctgatttttt
     7141 tgtaacaaaa ttacaaattt tgtactataa tagcacccgc ttcccacttt cagacggcat
     7201 accttttaaa atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt
     7261 acagataata cggcaaggcg aggcaacgcc gtactggttt ttgttaatcc actatactca
     7321 ccgtctgaat acccgataca aaaatcagaa acgcacaaac aaatccccaa taccccccgt
     7381 tccgacagga gaccgaccgt gaacactact cctatccact ccaaactcgc cgaaatcacc
     7441 gggcgcatta ttgaacgcag ccgtccgacg cgtgaaaaat atctggcgaa gatccgcagt
     7501 gccaaacaaa tgggacgctt agagcgcaac cagctcggtt gctccaactt ggcgcacggc
     7561 tatgctgcca tgcctaaaag tatcaaaatc gaaatgcttc aggaaaccgt ccccaactta
     7621 ggcatcatca ccgcctacaa cgacatggtt tccgcacacc agccgtttaa agacttccct
     7681 gaccaaatca aagacgaagc gcagaaaaac ggcgcgaccg cccaagtcgc cggcggcaca
     7741 cccgccatgt gcgacggcat cacgcaaggc tacgccggta tggaactgtc gctgttctcc
     7801 cgcgacgtga ttgccatgag taccgccgtc gggctgtcgc atcaaatgtt tgacggcagc
     7861 ctgtttatgg gcgtatgcga caaaatcgtt ccgggtttga tgataggcgc gctttcgttc
     7921 ggtcatattc cgggtatctt cgtccccgca ggcccgatgt ccagcggtat cggcaacaaa
     7981 gaaaaagccc gcacccgcca gcttttcgcc gaaggcaagg tcggacgcaa cgaacttttg
     8041 aaaagcgaaa tgggttctta ccacagcccg ggcacctgca ctttctacgg cacggcaaac
     8101 tccaaccaaa tgatgatgga aatgatgggc gtgcacctgc ctgccgccgc cttcgtccac
     8161 ccttacaccg acctgcgcga agccctaacc cgctacgccg ccggacacct cgcgcgcggc
     8221 atcaaaaacg gcacgattaa acctttgggc gaaatgttga ccgaaaaatc ctttatcaac
     8281 gccttgattg gcctgatggc aaccggcggt tcgaccaacc acaccatgca cctcgttgcc
     8341 atggcacgcg ccgccggcgt gattttgaac tgggacgact tcgacgaaat ttcctccatc
     8401 atcccgctgc tcattcgcgt ttatccgaac ggcaaggccg acgtgaacca ctttaccgca
     8461 gcgggcggac tgcctttcgt tatccgcgaa ttgctgaatg caggcctgtt gcacgacgat
     8521 gtcgataccg tcgtcggaca cggtatgcgc cactacacca aagagccttt cctcatcgac
     8581 ggcaaactcg aatggcgcga agcccccgaa accagcggca acgacgacat cctgcgtaaa
     8641 gctgacaacc cgttctcccc cgacggcggt ctgcgcctga tgaaaggcaa catcggacgt
     8701 ggcgtgatta aagtgtccgc cgtgcgcgaa ggctgccgca ttattgaagc gcctgccatc
     8761 gtgttcaacg accaacgcga agtgttggct gcgtttgaac gcggcgagtt ggaacgcgat
     8821 tttgtgtgcg tcgtccgcta ccaaggcccg cgtgccaacg gtatgcccga attgcacaaa
     8881 ctgaccccgc ctttaggcat cctgcaagac cgcggcttca aagtggcgct gctgaccgac
     8941 ggccgtatgt ccggcgcgtc cggcaaagtt ccagcctcca tccacatgac acccgaagcc
     9001 ctgatgggcg gcaacatcgc caaaatccgt accggcgacc tgatccgctt cgactccgtt
     9061 accggcgaac tcaacgtcct gattaacgaa gccgaatgga acgcccgaga agtcgaaagc
     9121 atcgacttgg gcgcgaacca acaaggctgc ggccgcgaac ttttcgccaa cttccgcagc
     9181 atgaccagca gcgccgaaac cggcgcgatg agcttcggcg gcgaatttgc ctgatgcgcg
     9241 tttcagacgg ccttttcaga ccgaaggccg tctgaaaaat tattcaagtg ttttaagata
     9301 gacgtaggtc ggattctcga atccgacaca gccgtccaag atgtcggttt cttgaatccg
     9361 acctacaacc tgtcccatct taataaaata ccccatccca cccggagaac cgaaatgtcc
     9421 aaactgaccc cccgcgaaat cctgaccgcc ggcgcagttg taccggtaat ggcgattgac
     9481 gacttgagta ctgccgtcga tttgtcccac gcccttgtcg aaggcggcat ccccaccctc
     9541 gaaatcaccc tgcgcacccc tgtcggcctc gatgccatcc gcctgattgc caaagaagtg
     9601 cccaacgcca tcgtcggcgc gggtacggtt accaaccctg aacagctcaa agccgtcgaa
     9661 gacgcaggcg cggttttcgc catcagcccg ggtttgcacg aatccctcgc caaagccggc
     9721 cacaacagcg gcatccccct gattcccggt gttgccaccc cgggcgaaat ccaactggct
     9781 ttggaacacg gcatcgacac cctcaaactc ttccctgccg aagtcgttgg cggcaaagcc
     9841 atgctcaaag ccctgtacgg cccttacgcc gatgttcgct tctgcccgac aggcggcatc
     9901 agcctcgcca ccgcgcccga ttacttggca ctgcccaacg tcctgtgcgt cggcggctca
     9961 tggctgacgc cgaaagaagc cgtgaaaaac aaagactggg acaccatcac ccgtctcgcc
    10021 aaagaagcgg cggcattgaa acccaaagcc tgaaccgcat cgtaaaaatg ccgtctgaag
    10081 ccctttccag tctcagacgg cattttgccg cttggcggcg cagtcggcat acacggcagc
    10141 accactccga catactgccc ctaaaatgcc catccgcctt ccgcataata aaaataacgt
    10201 tcagttcatt cgacagcagc cggacagccc atactacgcg gctgaaaaaa tgccgtctga
    10261 aacgcattca gacggcatcc gcttaaaaaa acaactgatt caaggccgat taatccgctt
    10321 ccaaaaccac tttcatcgct tgattttcgg cggcgtgttt gaacacgtcg taggcttttt
    10381 ccaattcgct gaatttgaaa cggtgggtca acattttggt gtaatcgacg gagctgctgg
    10441 aaattgcctt catcagcatt tcggtggtat tggcgtttac caggccggta gtgatggcaa
    10501 gctttttaat ccacagtttt tccagtttga aatcaacgga ttgaccgtgt acgccgacaa
    10561 cggcgatatg gccgccgggt ttcacaatgt cttggcacat attccaagtt gcagggatac
    10621 cgacggcttc gatcgcgcag tccacgccgt cttcgccgac gatagcgaca acttgcttgc
    10681 ttacatcgcc ggaagcaggg ttaatggtat gggttgcgcc caactctttc gccagtttca
    10741 aacggttttc gtccatatcg caaacaatga tggcggcggg gctgtacagt tgggcggtcg
    10801 gcaaggcgtc gctcaacaac agggcgactt cttcgttgac gttgtcgggc agcggcacga
    10861 ggctgttgtc ggcataaggc gtgcggacgt attctgcctg cgtgccgtca atcatgtagc
    10921 ccaaaatcca gccgccgttg cggcaatgcg aataaagttg gattttgcag ttgtcgcaag
    10981 tacagcattt gctgacgcat gaaataatga ctttatcgcc gactttgatg ttttttacag
    11041 cctcgccgac ttcttctaca ataccgatgc cttcatgacc gagaatacgg ccgtcggcga
    11101 cttcgggttt ttttgccttt ccaaataccc aaatcggtac cgcaaatcgt ggttttgacg
    11161 attttcacca ccgcatcggt cggatcgata atctgcggac ggggtttttc ttcaaaacgg
    11221 atgtcgtttg cgccgtgata aaccattgct ttcatgctga tactccttgc ttgttgataa
    11281 ataatttcaa taccgcaata aagtttcctt atatgagtta tatgccccta caaaaaataa
    11341 gtcaataaga attattttca caatgttata caataacata ctattttaaa tataaataaa
    11401 accaccgatt gatattaatg aacacaccca tccccttctc cgaacggctc atccgctggc
    11461 aaaaacaaca cggtcgccac cacctccctt ggcaggtcaa aaacccttat tgcgtctggc
    11521 tttccgaaat catgctccag caaacgcaag tcgccaccgt gttggactac tatccgcgct
    11581 tcttagaaaa attcccgacc gttcagacgc ttgccgccgc gccgcaagac gaagtgttgt
    11641 cgttgtgggc gggcttgggc tattacagcc gcgcgcgcaa cctgcacaaa gccgcgcaac
    11701 aagtcgtcag gcaattcggc ggcacgtttc cgtcggagcg caaagacttg gaaaccctct
    11761 gcggcgtagg cagaagcacc gccgccgcca tttctgcctt ctccttcaac cgccgcgaaa
    11821 ccattttgga cggcaacgtc aaacgcgtac tctgccgcgt gttcgcccgc gacggcaatc
    11881 cgcaggacaa aaaatttgaa aactcgctct ggacacttgc cgaaagcctg ctgccgtctg
    11941 aaaacgccga tatgcctgcc tatacacaag gtttgatgga tttgggcgcg accgtgtgca
    12001 aacggacgaa acccttgtgc caccaatgcc cgatggcgga catctgcgaa gcaaaaaagc
    12061 aaaaccgcac cgccgagctg ccgcgcaaaa aaaccgccgc cgaagtaccg accctgccgc
    12121 tttactggct gattgtccgc aaccgggacg gcgcgatttt gctggaaaaa cgccccgcca
    12181 aaggcatttg gggcgggctg tattgcgtgc cgtgttttga aagtttgaac gggctttccg
    12241 actttgccgc caaattctcc ctgaccatgg cagatatgga cgaacaaacc gccctgaccc
    12301 accgtctgac gcaccggctg ctgatgatta cgccgtttga aggacaaatg ccgtctgaaa
    12361 gcccttcaga cggcatttgg ataaagccgg cgcatttgaa agattacggc ctgcccaagc
    12421 ctttggaaat ttatttaaac ggtaataggt tagaataaac aaaataaacc cattgaactg
    12481 ttgtttgcag gtatcgcagc aagaacaacc gatgaatttg ggtcgtattt taggcggtgg
    12541 gataatgttc aaatgggaca tttggaacgg aagaagtcgg caatttaaaa aggatttaaa
    12601 aagcaaagaa ggtcaaaaac atgaacacaa acttaaatga caaagacaaa gccatggata
    12661 ccgcaatcag gtttcagaaa aggatgagga ttccgaaatt tttcttttta attctctgaa
    12721 tcacaatggt tttggcattt atccaagacg tgataacggg ttctaatttt ctgcaaataa
    12781 caattaatgt aaaattttcg taaaaattta tcggctttta aaacaaaatt gactaaaata
    12841 gtcgcgagtt tttactgcaa taaaggagat tgcaatgaat atgaaaacct tattagcact
    12901 agcggttagt gcagtatgtt cagttggtgt tgcgcaagca cacgagcata atacgatacc
    12961 taaaggtgct tctattgaag tgaaagtgca acaacttgat ccagcaaacg gtaacaaaga
    13021 tgtgggtaca gtgactatta ctgaatctaa ctatggtctt gtgtttaccc ctgatttaca
    13081 aggattaagc gaaggcttac atggtttcca catccatgaa aacccaagct gtgagccaaa
    13141 agaaaaagaa ggtaaattga cagctggttt aggcgcaggc ggtcactggg atcctaaagg
    13201 tgcaaaacaa catggttacc catggcaaga tgatgcacac ttaggtgatt tacctgcatt
    13261 aactgtattg catgatggca cagcaacaaa tcctgtttta gcaccacgtc ttaaacattt
    13321 agatgatgtt cgcggtcact ctattatgat ccacacgggt ggtgataatc actccgatca
    13381 tccagctcca cttggcggtg gcggcccacg tatggcatgt ggcgtgatta aataattcga
    13441 ttgttcgaaa cgaaaagtgc ggtgaatttt gaccgcactt ttttgctaga tatttagcat
    13501 ttaattcacg acttcagcag tatagtgaat taaatttaaa ccagtacagc gttgcctcgc
    13561 cttagctcaa agagaacgat tctctaaggt gctgaagcac caagtgaatc gattccgtac
    13621 tatttgagac ctttgcaaaa ttcctttccc tcccgacaac cgaaacccca acaca
//
LOCUS       DBBZYD010000054        13583 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.054, whole genome shotgun sequence.
ACCESSION   DBBZYD010000054 DBBZYD010000000
VERSION     DBBZYD010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13583
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.054"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            234..446
                     /locus_tag="ACJJDL_001299"
     CDS             234..446
                     /locus_tag="ACJJDL_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HGG7574016.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            594..2177
                     /locus_tag="ACJJDL_001300"
     CDS             594..2177
                     /locus_tag="ACJJDL_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HGG7574017.1"
                     /translation="MSSKKKKAAFARAATENGVPDVSNIKNSYDDLMYESGAFSQTAI
                     NNLEARARLMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIERMGLENVRLEEKDILTIDESFGKFDYIIVHGIWSWVPDTVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLRDIMQFSSRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLGGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDTNLH
                     VSFVSWMAEHTRERILALAGDDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDILLSGIRDVMKTGEAFKTEDVAENLDRRFPGLEF
                     DRMKINSQLLLQTILGRFSVSSDNAGKPFFEDHKTYVPARFTDYAAAFVEHGAEAFVR
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2259..3356
                     /locus_tag="ACJJDL_001301"
     CDS             2259..3356
                     /locus_tag="ACJJDL_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HGG7574018.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANTIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQENIPSYAEALKREGHNPFFSA"
     gene            3470..4585
                     /locus_tag="ACJJDL_001302"
     CDS             3470..4585
                     /locus_tag="ACJJDL_001302"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HGG7574019.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     ACGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIIGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4710..5165
                     /locus_tag="ACJJDL_001303"
     CDS             4710..5165
                     /locus_tag="ACJJDL_001303"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HGG7574020.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RSEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5236..5712
                     /locus_tag="ACJJDL_001304"
     CDS             5236..5712
                     /locus_tag="ACJJDL_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HGG7574021.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5700..6626
                     /locus_tag="ACJJDL_001305"
     CDS             5700..6626
                     /locus_tag="ACJJDL_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG7574022.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMEQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLAASKTD
                     LCTPEQLVEFHDKAAKLFPPKAKVVEVRNAQLDIQWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6691..7245
                     /locus_tag="ACJJDL_001306"
     CDS             6691..7245
                     /locus_tag="ACJJDL_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7574023.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDNTIFHRVIGGFVIQGGGLTEDLAQKASDKAVANESGNGLKN
                     TVGTIAMARTTDPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVE"
     gene            complement(7484..8443)
                     /gene="ttcA"
                     /locus_tag="ACJJDL_001307"
     CDS             complement(7484..8443)
                     /gene="ttcA"
                     /locus_tag="ACJJDL_001307"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HGG7574024.1"
                     /translation="MSKKIKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQSLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(8536..9399)
                     /locus_tag="ACJJDL_001308"
     CDS             complement(8536..9399)
                     /locus_tag="ACJJDL_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HGG7574025.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVGAEL
                     EASAEPLAAQEPSLVFTAECVSDGICSVVLPHRGILHIAPETALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEEAGIVLDSVQDSENFTALTVIKFSAAQKELTVPNGGIFKA
                     VHLFFKTENAE"
     gene            complement(9434..9796)
                     /locus_tag="ACJJDL_001309"
     CDS             complement(9434..9796)
                     /locus_tag="ACJJDL_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG7574026.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            9871..10350
                     /gene="ybaK"
                     /locus_tag="ACJJDL_001310"
     CDS             9871..10350
                     /gene="ybaK"
                     /locus_tag="ACJJDL_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HGG7574027.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGNGLIVLMHGDKQISTRNLARHLGAKRIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            10372..11094
                     /locus_tag="ACJJDL_001311"
     CDS             10372..11094
                     /locus_tag="ACJJDL_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HGG7574028.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            11096..11971
                     /locus_tag="ACJJDL_001312"
     CDS             11096..11971
                     /locus_tag="ACJJDL_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HGG7574029.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWWLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(12043..13440)
                     /gene="aspA"
                     /locus_tag="ACJJDL_001313"
     CDS             complement(12043..13440)
                     /gene="aspA"
                     /locus_tag="ACJJDL_001313"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HGG7574030.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGKLGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLAVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
BASE COUNT         3246 a         3307 c         3728 g         3302 t
ORIGIN      
        1 aacgacgtac tggtttttgt taatccacta taaatgcgcc gattgccaag gcgatgatgc
       61 tcaaccaggg tttttgcgaa gcgttcattg ttgtcgtcct gatgggaatt gccgccatta
      121 tgcgcaagcg tccgtctttt tccaaaccgc cgcaccgttt ccgcgtttgc ccaagttcac
      181 gccccgactt acaataacgc ccgtcagatt gcagttccaa cgaaaggaaa atgatggaaa
      241 cccttatcct cgacatcggc ggcatgagct gcggcggctg cgtcaaaagc gttacccgga
      301 tattggaagg cgtaaaaggc gtggcaagcg tcgaagtcag ccttgaaaac aaaagtgcga
      361 ccgtcggata cgaccccgcg caaaccgatg caggggcgtt gattgaagcc gttgaagacg
      421 gcggctatga tgccgcgttg aaataaagcg gcaaaaatgc cgtctgaagc cttcgcgcct
      481 cctagatgcc gtctgaagta cgctccgcgc cttcagatgg catttgattt agttgaacgg
      541 gtaggatgaa ttggttaaac ttgcgggcat attgtcttta gagtgaacaa aatatgtcga
      601 gcaagaagaa aaaagccgct tttgcccgtg ctgcaacgga gaacggtgtg ccggacgtgt
      661 ccaacatcaa aaattcatat gatgatttga tgtacgaatc cggcgcattc tctcaaaccg
      721 ccatcaataa tttggaggcg cgcgcccgcc tgatgggctt gcagcccgcg cccgccgcca
      781 atgccaaggt cttggagctg ggctgttcga tgggcggcaa catcatcacg caggcgcttt
      841 attacccgga tgcggaattt gtcggtatcg acttgtccgg caggcaggtt gcgcagggca
      901 acgccatcat tgaaagaatg ggcttggaaa atgtgcgtct ggaagaaaaa gatattttga
      961 ccatcgatga gtcattcggg aagttcgact atatcatcgt ccacggtatt tggtcgtggg
     1021 ttcccgatac ggttaaagac aaaatctttt cgatttgccg gaacaacctg acggaacacg
     1081 gcattgccta tatttcgtac aatgtctacc ccggctggaa acggcaggag cagttgcgcg
     1141 atattatgca gttttccagc agggatgtgc ttgaagaacc cttggaagcg cgaacgcgga
     1201 aaggcttgga cgcgctcaag gcactggcgg aaattttgga aaacgacaag ggcttgggcg
     1261 gcggcggcaa acttccggcg attcaaaaaa tattgaatca taatttttat tacatcgcac
     1321 acgaatatat ggaggcgttt aacgacccga tttacgtcaa cggcttcatc gaatgggcta
     1381 accgccacag gctcgcatat atcggggata ccaatttgca cgtgtctttt gtttcttgga
     1441 tggcggagca tacgcgggag cggattctgg cattggcagg ggacgattat attgccaaag
     1501 aattttacag tgatatttta tccgaccgcc aattccgccg ttcgctttta tgccgtgagg
     1561 aagtcgggga tactgtcagg cgtgatgagt cggttgccgt cgaagtgata gaaagtttga
     1621 atttccgccc ggcaagaggg gaaacaatca actttgatga aaacgatatc ctgctttcgg
     1681 gcatacgcga tgtgatgaaa accggagagg cgtttaaaac ggaagatgtt gcggaaaatc
     1741 tcgaccgccg atttcccggt ctggaatttg accgcatgaa aatcaattcc cagctgttat
     1801 tgcaaaccat tctcgggcgt ttttctgttt catcagacaa tgcgggcaaa ccattttttg
     1861 aagaccataa aacctatgtg ccggcgcgtt ttacagatta tgccgccgcc tttgtggaac
     1921 atggcgcgga agcgtttgtc cggcctgcca accgttacaa cgaaagcacc ccctcattcg
     1981 gatacgggca tttgtacatt atgcggcaat tgtcgcggcc gacgagcaaa caggcattga
     2041 ttgaaacggt tgccgaaaac ttgaacatcg tcagcaccac gcccgacggt ttgacattcc
     2101 atccgcctgc cgaagtgtat gtggaagaaa tattggcaga cttggcagac aggcattttc
     2161 tcgtttcggc ggattgacgg gcaagtcccg gcggcaatcc atccgatata ttttcagaca
     2221 ggaaagacac acactacgaa aagcggtgca cgacacatat gaaccagaca tttaccttgc
     2281 ccgatacgcg cccgtatccc caaaatccga ttaaaaacca cctgctgctc aatgcctacc
     2341 agttggcgca taattcttcc caggcttcgc gcaaactctc gtccggccaa cttcaaaccg
     2401 aaatcagggg gatgcttgag caaaaccact atatcaacct ttccctcgcg ctgacgatgt
     2461 cgcccgatgc cggaacttat gccgcgctgc tttccagtgt gaacgcagta ctcgattgcg
     2521 agaaagaagg cgaagtgcag tggttcgccc tgccggtcgt gctggtgtcc ggctgcaaga
     2581 aagaacgggc aatcgagatg aagctgccga cggaggcatt gtttgcctgc ctgcaaaact
     2641 atccgcacct gcgcgcgttg acgcaagaga cacaatggct gccttatctt gtgcattcgt
     2701 ccgatttgag tgcggtcgcg ccggatgagt ggtggcgtgc caaacaaaat accgaagcgg
     2761 cggcgcaaca cttacgccgt ttcgccccgc gccctttgct gttgcccgaa gggcagtccg
     2821 tccacgtcgt ttacgcgctg ggtttcggca gcggcaaggt tcagacggca ttgggtcaga
     2881 accttcttca ggcaggcctg cccttaatgc aggtatggca ggaaaatctt gcatcggaag
     2941 gtgttacgct gtttgccaat ccgctttccc cggattctcc ggtacgcgcg ctttcagacg
     3001 gcagccacac gcgccagcgt atggcgatgg atgtttttgc ggcaaacacg atacgcgccg
     3061 tccgtatgca gagtccgcgc gtcggcgtgg tcgctgcggc aaaggcgggc ggacaggttt
     3121 tattcgggtt taatgcgacc gacggcgcgt tcgaagtcgt gccgcaggtg ttttcgtggc
     3181 agctttcctt taccgacaat attggcgtta ttcagcaaaa ttttttggat ttaatggcag
     3241 aatgccgtgt agaacacgtt tacctgttgc acaatccttt gggcgaacag gaaaacatcc
     3301 cgagctatgc ggaagcgttg aaacgggaag ggcacaatcc gtttttcagt gcatagtgat
     3361 ttgtagtagt gataggcttt ctcatttcta taataaatca aaataaagag cacaacactt
     3421 tttcattctg tgttgtgcct tgagtgaaac gaaaggatga attataaata tgaagattgt
     3481 aattgcaccg gattcgttta aggaaagctt gacagctcaa caggtagctg aagcaataaa
     3541 aagaggcttc caacaatcga tagcagatgt ggaatgtctc ctctgtcctg tcggtgatgg
     3601 gggagaaggc actgtagatg ctatccgaca ttctcttgac ctagaagaaa aatgtctcca
     3661 agtgacagga ccttttggac aaaaagaagt catgcgctat tttcaaaaag aacaactagc
     3721 cctattcgaa gttgctgatt tggttggtct tggaaaaatc ccgctagaga aacgaaatcc
     3781 attacaaatc caaactcgtg gtattggaga attgattcgc cacctcatta gtcaagaaat
     3841 taaagaaatc tatattggcg ttggcggtac ggccagtaat gatggaggta ttgggattgc
     3901 tgctggttta ggttatcaat tttatgatga ggatggaaat accttgcccg cttgcggtca
     3961 atccttacta aacctagctt ctgtttcaac agaaaatcgc tatgaaattc ctgaagatgt
     4021 tcacattcgt attttagcag atgttgtgag tcccttatgt ggacaccaag gtgcgaccta
     4081 tacgtttggc aagcaaaaag ggttggattc tactatgttt gaggccgtag atcaggcaat
     4141 acaagatttt tatgaaaaag tctcccctgc aacattaaaa cttaaaggag caggagctgg
     4201 tggaggcatc gctggtggtt tgtgcgcctt tgctcaggca agtatcgtat ctggaattga
     4261 cacctgcctg gacttgattg actttgataa gaaagtgtca gatgttgact tggttatcat
     4321 tggtgaagga agactagatc gtcaaagttt agcagggaaa gcgcctattg gtgtagcaaa
     4381 aagaacccct gtcggagttc ctgttgtcgc tatttgtggc agtctcgttg aagatttgcc
     4441 ttccctgcca tttgaaaata tccaagctgc cttttctatt ttggagaaaa gtgaaccttt
     4501 agaagatagt ttgaaaaatg ccagtctcta tttggagcat acggcttcta atattggaca
     4561 cttattaaat atgcctaaga tttagccaaa ccatttcttc cagatggatg ttttggctgg
     4621 ttctgcctta tgcggttacg attaaccgac cgatgacgtc tgaaagggtt tccgcttcag
     4681 acggcatcgc gccggaacag ggaggggata tgaaaaaacc gaaaatcctt tttgtctgcc
     4741 tcggcaacat ctgccgttcg ccgatggcgg aatacatttt gcgccgccgc gccgccgaag
     4801 cgggcattcc ccttgaagcg gacagcgcgg ggacatcggg ctggcacgac ggcgaagata
     4861 tgcaccgcga gacggcaaag atattgaaaa aacacggtat cgatgcttca ggctttacca
     4921 gccgcaaaat ccgccaaagc gatgcggcgg cgtttgactg catcatcgcg atggacggca
     4981 agaatttgtc cgaattggaa agaaccttcg gcaggcggtc ggaaaaaata ttcaagctga
     5041 ccgacctgat acccgaaagc ggttacgacc atgtccccga tccgtggtac acgggcgatt
     5101 ttgaagaaac cttcaggctt gcggatgcgg gctgtcgggc attgttggaa aagatttcca
     5161 aataaagcaa ttgaatacaa atataaaacc gcctcctgcc gtatcggttg ttcagacggc
     5221 ataaacagag aatttatgaa aacaaatttc aaacagaaaa ttattgaaca ggcacgcagc
     5281 gaaggcttgc aggtaaccgc tttgcgcgag caggtattag atattgtctt gcagcaaagc
     5341 ggcgtgatta aagcctacaa cgtcttgtcg cagatgcagc agcaaagcga gggcgtgctt
     5401 gcaccgccta ccgcctaccg cgcccttgat ttttgggcgg agcagggcgt tttgcacaaa
     5461 gtggcggcgg tcaacggcta tattttgtgc agccacgcgc agcacgagtg cgacgaccat
     5521 tgccacgacc acgaagaagc cgaagcgcac cacagcgcgt ttattttggt ctgcaccgaa
     5581 tgtggcacgg cggacgagca aaccctcagc cacgagtggg cggcactgcg cgcaggcgtt
     5641 gccgaaagcg gctttgcgct gaaagaagaa cacgttgttt taaccgggat ttgtaaaaaa
     5701 tgtcagaaat gaaaaaaacc aaagtccacc tgatttcagg ttttctggga acaggcaaaa
     5761 ccaccgcgct caaaagtctg atggaacaaa aagaccccaa cgaaaaatgg gtcatcatcg
     5821 tcaacgagtt tggcgaaatc ggcattgacg gcgcggtatt gagcgacaac ggcatccctg
     5881 tggcagaaat cgccggcggc tgtttgtgtt gcaccgccgg cccgcaaatg ggcgtaaccg
     5941 tgcagaaaat gctgcgcgat gccaagcccg accgcctgat gattgaggca agcggactgg
     6001 cgcacgccgc cagcgtcatc gacgaactca aagccaaacc gctggacagc cttttggaaa
     6061 tcggcgcggt ctttaccgtc gtcgatccgc gccaattcat caaccccgat tacgcgcaac
     6121 aggcattgta taaagaccaa atcggcattt gcgacgtatt ggccgccagc aaaaccgatt
     6181 tatgcacccc cgaacagctg gtcgaatttc acgacaaagc ggcaaaactg ttcccgccca
     6241 aagccaaagt ggtcgaagtc cgaaacgcgc aactcgatat ccaatggctc gatattcccg
     6301 tcatcgaaaa atcacgctac cgcctcaaag ccctgccgga caacacgatg ggcttccagt
     6361 cgcaaggttt cacattcccc gccggacgcg atttcgacgg cgaaaaattg accaacttct
     6421 tcaatgattt gcccaagatg accgaaggac tcgtccgcgc caaaggcgtg tttcaagtac
     6481 tcggcacttg ggtgtggctc aactgggtgg acgggcaatg gggtgcgaac caagtctcgt
     6541 ggcggcgcga ttcgcgtttt gaattgattg ccaaatcgtt tgatgcggat ttaatcgaac
     6601 aaaagctcaa agacgcattg gaatagcgtt cacgcgcctt cagacggcat atgaaatgaa
     6661 aatgccgtct gaaggtctga ggaggacggg atgaaaccca aattcaaaac cgttttaacc
     6721 gcgctgcttt tggcggtttc cctgccgtct atggcggcaa cccatgtttt gatggaaacc
     6781 gatatgggca atatccgttt ggttttggac gaatccaaag cacccaaaac cgttgccaat
     6841 ttcgtgcgct atgcccgaaa aggcttttac gacaatacga tttttcaccg cgtcatcggc
     6901 ggcttcgtta tccaaggcgg cggattgacc gaggacttgg cacaaaaggc aagcgataag
     6961 gccgttgcca acgaatccgg caacggcttg aaaaacactg tcggcaccat cgccatggcg
     7021 cggacgacag accccgattc cgccaccagc caattcttta tcaatctggc ggacaatgat
     7081 tcactcaact acaaaaacgg acaatacggc tataccgttt tcggcagggt cgaaagcgga
     7141 atggacaccg tttccaaaat cgcccgcgtc aaaaccgcca cgcgcggctt ttatcaaaac
     7201 gtacccgtac agcccgtcaa aatccgtcgc gttgttgtcg agtaatataa cgggaaacct
     7261 tcagaaagct gaaacggaaa aagcaggtgt ttggggttga aaagcgtctg cttcgggatt
     7321 ttataatgga ttaaatttaa accagtacgg tgttgtctcg ccttgccgta ctatttgtac
     7381 tgtctgcggc ttcgtcgcct tgtcctaatt taaatttaat ccactataaa atgccgtctg
     7441 aaacgccaaa cgggcttcag acggcatttt tgacggcggg gggttacgcg ccgcaggttt
     7501 tcggcttgtt cgccagaatg ttgatgactt tgcgttcggc tttttgcggc tcgattttga
     7561 tttcgctttc gtcttcttcg ctgccgtctg aaaaacgttc gggcattttt tcgctgtcaa
     7621 acgccaaatc gccgccgtgt ttcaggcttt gaccgcgttc caatccgaca aagtcgaaga
     7681 gttcggtatc ggcaaggtgg gaagggacga cgttttgcag ggcggagaac atcgattcga
     7741 tgcggccggg gaagcgtttg tcccaatcgc gcagcatatc gccgatgact tggcgttgca
     7801 ggttgggttg cgagccgcag aggttgcacg ggatgatggg gaattgtttt aattcggcgt
     7861 atttgattaa gtctttttct tttacatacg ccagcggacg gatgacgatg tgttcgccgt
     7921 tgtcgctcac cagcttgggc ggcatggctt tgagtttgcc gccgtaaaac atatttaaaa
     7981 acaaggtggc gaggatgtcg tcgcggtggt gtcccaaggc gattttggtg cagcccaatt
     8041 cttttgcagt gcggtagagg atgccgcggc gcaggcggct gcacagcgaa caagtcgttt
     8101 tgccttcgtc taatacgcgt ttgacggtgg agtaggtgtc ttcttcaacg attttgtagg
     8161 gaacgccgat gctttcgaga taggtcggca atacttcttc ggggaagccc ggctgctttt
     8221 ggtcgagatt gacggcaact agttggaaat caatcggcgc gctggcttgg agccggcgca
     8281 ggatgtccaa gagggcatag ctgtcttttc cgccggagag gcagaccatg attttgtcgc
     8341 ccggctcgat catattgaaa tcgttaatcg cgtcgccgac ggcgtggcgc aggcgtttgc
     8401 tgagtttgtt gttttcgagt tcttgcttga tttttttgga cataacggtt cgggtttgaa
     8461 aattggaaag gcggcattgt aaccgattgg cggggcggca atgccgtctg aagggcttca
     8521 gacggcatcg gcggcttatt ctgcattttc ggttttaaag aagagatgaa ccgctttgaa
     8581 gataccgccg tttgggacgg tcagttcttt ttgtgcggcg gagaatttaa tcacggtaag
     8641 ggcggtaaag ttttccgaat cttgaacgct gtcgagtacg atgccggcct cttcgccgtc
     8701 cgccgtcagc agggttcctg cttcgacggc cgaatttccc gacaataccg ccaagccgcg
     8761 tttgacctgc ccccgatact gggcacgggc aatgatttcc tgtcccggat agcagccttt
     8821 tttgaagtgt acgccgccga tgatgtgctg gttgagcatt tgggcgacgg cggtttcttt
     8881 ggtagccgcg catatccacg ggtaaccgct gcggatttcg tgcagccgcc acgcgttttc
     8941 ggcggcggca tcataaggcg gcagggcggt ttcgggggcg atgtgcaaaa tgccccgatg
     9001 gggcaggacg acggaacaga tgccgtctga aacgcattcg gcggtaaaga cgagactggg
     9061 ttcttgcgcg gcaagcggtt cggcggatgc ttctaattcc gcgccgacgg cgtaatcttc
     9121 aaggatttca aaaacgactt tggcacgcaa cacaaacatc cgcaggcgtt tgacggttgc
     9181 ttcaagcagg tcttgcgcca taatcagcag caaatcgccg cctcggttga cgacaatcat
     9241 attggcgatg acgcggcctt tgggcgtgtt gtaagtcgca taacacgcct gcccggtctg
     9301 aagattattg atgtcgttgg aaagctgtcc gtgcaggaag gtttggcggt cttcgccact
     9361 gacgcgcacc acgccgaaaa agggcagtaa ggttttcatc atttgcctac tctgaaaata
     9421 taaggaaatc tgtttatgca gttgccgcgt ctctcttcac ggcggttatt ttgatttcga
     9481 cgcgccactc cggacgggcg agccgcgctt ccacgcaggc gcgggcgggc gttctgccgg
     9541 cggcaaccca agcgtcccac acgccgttca tttccgcata gtcgcccata tcgcgcagat
     9601 agatgaccgc atccaaaacg tgcgctttgt ccgagccgca ttccgccagc cagcggtcga
     9661 tttgggcaag cacgtcggca gtctgttcgg cagccgtttc accgttttcg ggaaccatgc
     9721 cagagaggaa aatcaagccg tttgcgccga cggcttcgga atagcggggc gttgtgccga
     9781 aatatcggat atccatatcg gtttccttcg ataaagggga tatatggtaa cattgcgctt
     9841 gaccgatttc catgttttgc atgacgaaaa atgagtaaac acacttatcc gataacacct
     9901 gccgtgcgcg ttttgcgtga aaacggcatc gaatttgaac cttttaccta tgcctatgag
     9961 gaacacggcg gcacggcgca gtttgcccga ctattcggca aagacgaaca cttggtcatt
    10021 aaaaccattg ttttgcaaga tgaaaacggg aatgggctga ttgtcttgat gcacggcgac
    10081 aaacagattt ccacgcgcaa tctggctcgg catttgggtg cgaaacgcat cgaacccgct
    10141 acgcccgcac aggcaaacaa gtggacgggc tatctggtcg gcggcacaac gccgttcggc
    10201 atccggacaa aattggatat ttacgtcgaa cagtcggtga tggatttgga aaccatctat
    10261 atcaacggcg ggaaacgcgg gttcattatc ggtatccgtc ccggagattt aaatattttg
    10321 aacccgaaaa caatacaggc ggcggtttga ccgggaagta taaggaacaa tatggacaaa
    10381 gatttgtatg ccgtattggg cgtgtcgccg caggcggggg cggacgaaat caaacgcgcc
    10441 taccgcaagc tggcaatgaa ataccatccc gaccgcaatc cgggcaatcc gcaggcggaa
    10501 gaaaagttca aagaaatcca acgggcttac gatacgcttt ccgacctgtc gaaacggatg
    10561 caatacgacg cgtccttcag acggcatgag gaacgcgggc ggcaggaaga ggcattccgc
    10621 cgcgaacagg cgcgcaggga gcagttttac cgcgaacaga tgcgccgcga acaggcgttc
    10681 agacaggcgt ttgaacggca ggcatcacgt tcgtgccata cttacgaacc gtccggcggc
    10741 ggaagcgggc gcaactatgt cctcgccgcc tacatcctgt tcggtttggg tgcaatcatg
    10801 ctgttcatgc ccatagtcgg cgtgattttc gcctatatgc ccatagtcgg cgtgattctc
    10861 gcctatatga aacggaacag tttggacagc attgtctatg ccgcacatac cgaatacctg
    10921 attaaaacct tttggcgcac attttggctt tatattttgg gtgcgctgac tgcccttttg
    10981 ggtatcggcg tgctgattat tattgcaacg aacgtctggt atttctaccg catcatcgcc
    11041 ggctttatcc gcttcaacgg cggcagggcg gttgcacccg agaaatggat atagtatggc
    11101 ttacctgtta atcagcatcg tgttcagcgt gtcggtttcc attttgctga aaatggcaag
    11161 gaagaaaaaa atcgacatcg cgcaggcggt cgccgtcaat tatgtggtcg cggtcatact
    11221 gaccctgctg gtattgaagc cggatgtcgg caatatcggc gcatttttgc cgacatggtg
    11281 gctgtttgcc gcattgggcg tgctgctgcc gtccgtattt gtcattatgg gcaaatccgt
    11341 agaatccgcc ggtatcgtca aatccgacgc ggcgcagcgt ttgtcgctgt ttttgccgat
    11401 tgttgccgcc ttgacgctgt ttggcgaaaa actcagcgaa ggcagactaa tcgggctgtg
    11461 cctcgcattt gccgcactgt tctgcctgct ttggaaacac agcggtggca aaaaatcagg
    11521 aagcgcgtgg cggcaggcgg cattgctgct gggcgtgtgg gcaggttacg gcattatcga
    11581 tatcctgttc aaacagcttg ccaaaagcgg aacggcattt gcgggcaacc tgctggttgc
    11641 atttgtgctg gcgggtgtgc tgatgtttgc ctgcctgttt gccaaatcgg tcagatggcg
    11701 tgttgagagt gtggtcggcg gcatattctt gggcggtttg aattttatga atatcgtaac
    11761 ctacatcacc gcgcaccaaa tgatgaagga taatccgacc ttggtttttg ccggtatgaa
    11821 tatcggcgtg attgttttgg gtacgctttc gggcgcattg ttctttaagg aaaaaatcaa
    11881 cacaatcaat acggcgggaa tcgtgttggc actgtgttct atcgcctgcc tgttttattg
    11941 gggggaagtc aaggtactgt tcggcatata atccggctga ttgatataac aaaatgccgt
    12001 ctgaagcagc atccctgctt cagacggcat ttgtctgcaa cgttacagat gggggttcat
    12061 caggttctcg ggagagagga tgcggttgag ttcttcttcg ctcaacagcc cgcgttccaa
    12121 gacaacctcg cgcacgcctt tgccggtttg ggcgcagatt ttgccgacca aatcgccgtt
    12181 gtggtgtccg atatacggat tcagataagt caccaaaccg atggagttga aaacgtaacg
    12241 ttcgcagatt tcgcggttga ccgtaatgcc tttgacgcat ttgtcggaca ggttgactgc
    12301 ggcattgccc aagagggaaa tggtttcaaa catacattgg gcgatgaccg gctccatcac
    12361 gtttaattgc agttgcccgg cttcggcggc gaaggtaatc gtcgtgtcgt tgccgatgac
    12421 tttgaagcag acttggttga ccacttcggg aatcacggga ttgactttgg cgggcattat
    12481 ggaagaaccg gcctgcaatt cgggcaggtt gatttctttc aagccggcac gcgggccgga
    12541 agagagcagg cgcaagtcgt tgcagatttt ggagagtttg accgccgtgc gcttcaatgc
    12601 gccgtgtacc atcacatatg cgccgcagtc ggaggtcgcc tcaatcaggt tttcggtcag
    12661 tttgcaaggc aagccgctga cttcggagag ttttttgacc accagttcgg cgtagccttt
    12721 gggcgtgttc acgcccgtgc cgattgccgt tgcgcccaaa ttgacttcca acagcagttg
    12781 gcgggtgcgg tcgaggttga ggatttcttc ttccaacaac acttggaaag attggaattc
    12841 ttggccggca gtcatcggca cggcatcttg aagctgggtg cggcccattt tcaaaacgtc
    12901 tttaaactct tcggctttgg cggcaaaggc gtttttcagg acggccagtt tgtcgagcaa
    12961 ttcgccgatg ctgtaataca cggcaaggcg gaagccggta gggtaggcat cgttggtgga
    13021 ttggctggcg ttgacatgat ccatcggatt gacgatatcg tagcggcctt tttcgtatcc
    13081 caagacttcc aatgcgaggt tggcgatgac ttcgttggtg ttcatattga ccgaagtacc
    13141 cgcaccgccc tgatacacat cggacgggaa ttggtcgagg cagcggttgt tcagcagaac
    13201 ttcgtcgcaa gccttttcaa tggcggcggc gatttcgggc ttgaccgcgc ccaacttacc
    13261 gtttgcctgt gccgtcgcct ttttcaccat caccatactg cggacaaact gcggcacgtc
    13321 agaaattttt tgtgtggaga ttttaaagtt ttcaatggcg cgcagggtgt ggatgcccca
    13381 atacacttcg gcgggaatct cgcggtcgcc caataaatcg tgttcgatac ggacagtcat
    13441 gtttttacct ttgtaagtcg gataattaat attgaaaaaa tgcgccatcg gaaagatgcc
    13501 gccgcaggac gaacactata ccggccggat gaaattgtcc atatcgtatg ccgtctgaaa
    13561 acgggaaacg ttgttttcgg gtg
//
LOCUS       DBBZYD010000055        13573 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.055, whole genome shotgun sequence.
ACCESSION   DBBZYD010000055 DBBZYD010000000
VERSION     DBBZYD010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13573
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.055"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(13..819)
                     /locus_tag="ACJJDL_001314"
     CDS             complement(13..819)
                     /locus_tag="ACJJDL_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HGG7574031.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGLGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1040..2410
                     /gene="ffh"
                     /locus_tag="ACJJDL_001315"
     CDS             1040..2410
                     /gene="ffh"
                     /locus_tag="ACJJDL_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HGG7574032.1"
                     /translation="MLDNLTGRFSNVLKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVVGSLTPDQAFIGVVNKTLTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
     gene            complement(2741..3436)
                     /locus_tag="ACJJDL_001316"
     CDS             complement(2741..3436)
                     /locus_tag="ACJJDL_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7574033.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPVE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
     gene            complement(3607..4149)
                     /locus_tag="ACJJDL_001317"
     CDS             complement(3607..4149)
                     /locus_tag="ACJJDL_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HGG7574034.1"
                     /translation="MLHLKDKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFS
                     KTPEAIFRCNLHTELKKKRKLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVV
                     LDVKQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWN
                     HVPPDLMEHIDGLKTKCPKP"
     gene            complement(4655..6767)
                     /locus_tag="ACJJDL_001318"
                     /pseudo
     CDS             complement(4655..6767)
                     /locus_tag="ACJJDL_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(6953..7558)
                     /locus_tag="ACJJDL_001319"
     CDS             complement(6953..7558)
                     /locus_tag="ACJJDL_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HGG7574035.1"
                     /translation="MTRQSLQQAAESRRSVYSLNKNLPVGKDEVVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(7607..8005)
                     /locus_tag="ACJJDL_001320"
     CDS             complement(7607..8005)
                     /locus_tag="ACJJDL_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HGG7574036.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            8113..9024
                     /locus_tag="ACJJDL_001321"
     CDS             8113..9024
                     /locus_tag="ACJJDL_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7574037.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAAGALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            9014..10315
                     /locus_tag="ACJJDL_001322"
     CDS             9014..10315
                     /locus_tag="ACJJDL_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HGG7574038.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCAAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPFYTAASPAGLVRLAVRLNTRAV
                     IADESHTFADKLTDNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAYADFDRYRE
                     VWLDRFSKQPPAGSDLFAAYRQPFPENLSAPQPAVLSDGIFLPRNGGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKNTSLMGAYLSAGCISPRLLARKSLERRLNAWTDNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWRLAASRHTCPDIAAAAHKTDPDGT
                     FVRRHIPELAHLSADTVHTPWRFACSVDTHGYPAHPVAGIP"
     gene            complement(10383..10553)
                     /locus_tag="ACJJDL_001323"
     CDS             complement(10383..10553)
                     /locus_tag="ACJJDL_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574039.1"
                     /translation="MLLYRLLGGAEIECGRCPVPPMTDWQHFLPAMGTVSAWVAVIWA
                     YLMIESEKNGRY"
     gene            10710..12860
                     /gene="dinG"
                     /locus_tag="ACJJDL_001324"
     CDS             10710..12860
                     /gene="dinG"
                     /locus_tag="ACJJDL_001324"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HGG7574040.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELSFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNMAVWTLEKLPQLTGKIAALTDKAELANLADEAASSLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGDFGIFIARIEQISAVWDLLSTVPIEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            12896..13510
                     /locus_tag="ACJJDL_001325"
     CDS             12896..13510
                     /locus_tag="ACJJDL_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HGG7574041.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGQATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT         3328 a         3751 c         3440 g         3054 t
ORIGIN      
        1 tgttggctct tcttatcttt tcagaatgat ttccaatacg aacttgctgc ccatataggc
       61 aatcatcagg ctgacaaatc cgatgatggt ccacacggcg gcttttttgc cgcgccatgc
      121 ggtcatgctg tgcttgagca gcagtccgcc gtaaatcagc catgacaata tgccgaatac
      181 ggttttatgg gtaaaggtca tgggtttgcc gaatacggct tcggcaaaaa atgttccgct
      241 gacgacggaa taggtcagca ggatgaaacc tgcccacatg gcctggaaca tgagtttttc
      301 caaactgagc agcgacggca ggaatcctgc gagcttggag aagttcctgc ggtgcaggct
      361 ccgattcagc agcagggtca aaacggacaa taatgttgcg atgccgaaca gcccgtatgc
      421 aagcagcgaa gttccgatat gcagcataaa gggaaggtcg gtaatttcat atcccgagaa
      481 ttttccagga aaaaccaaac ctgacagcag catcagtgcg gcgcaaggat acagcagcaa
      541 ctgcactccg cgcagcggat aaaagaagct gccggcaaaa taaataaaca gcatcatcca
      601 aacaatcagg ctgccggaat acccaaagcc cataatgatg attttgtctt gaatgaccgg
      661 cataagcagt gccgcgccat ggacggtcaa tgccgcgccc aaaaccggca attccgtctt
      721 ccacgggtaa tcccggccga gcccctgctg ttggcagtgc catgcaaatg cacccaatcc
      781 tgcgtaaacc gccgtcaaaa agatgaaaac tgtcggcatg gtggactttc tctaatctat
      841 actgttgcgc tgtatgcggc cgcttatgaa atattggaac ttttaacgtt ggaattgtaa
      901 aatccccgtt tcgggcaagc cttgacggat ttgccgatat gctgtccggc acacaagccg
      961 catcaaatta ttttgatttt attttaacaa agaatgcccc tgatggggca agctattctt
     1021 attcagacca aggaccagta tgttagacaa tttaaccggc cgcttcagca atgttctcaa
     1081 aaacatccgc gggcaggcca aactgaccga agacaatatt aaagaagcct tgcgcgaagt
     1141 ccgcctcgcc ctgcttgagg cggatgtcgc cctgcctgtc gtcaaagagt tcgtcaacaa
     1201 cgtcaaagaa aaggccctcg gtcaggaagt ggtgggcagc ctgacgccgg atcaggcatt
     1261 tatcggcgtg gtcaacaaaa ccctgaccga gctgatgggc agggaaaaca aaacgctgga
     1321 tttgtcggtt gcgccgcccg ccgtcgtgtt gatggcaggt ttgcagggcg cgggcaagac
     1381 gacgaccgcc ggcaaactcg cccgcctgct gaaaaacgat cagaagaaaa aggttttggt
     1441 cgtatctgcc gacgtttacc gccctgccgc gattgaacaa ctgcgtctgt tggccgaaca
     1501 ggtcggcgtg gactttttcc catccgatac caaccaaaaa ccggttgaga ttgcaactgc
     1561 cgccgtcgat tacgccaaaa aacattttta cgatgtattg atggtcgata ccgccggccg
     1621 tttggcaatc gatgaggaga tgatgaacga aatcaaagcc cttcacgcgg cggttaaccc
     1681 ggtggaaact ttgttcgtca tcgatgcgat gctgggtcag gatgcggtga acactgctca
     1741 ggcatttaat gaagccctgc cgctgaccgg tgtcgtattg accaagatgg acggcgattc
     1801 gcgcggcggc gcagctttgt ccgtgcgcca cgtaaccggc aagccgatta aatttatcgg
     1861 tgtcggcgaa aaaatcaacg gcctcgaacc tttccacccc gaccgtcttg ccagccgtat
     1921 cctcggcatg ggcgacgtat tgaccctgat tgaagacgtc caaaaaggta ttgatgaaga
     1981 agccgccgcc aaaatggcga aaaagctaca aaaaggcaaa ggcttcgacc tcaacgactt
     2041 taaagaacaa atccagcaaa tgcgcaatat gggcggtttg gaaaacctga tgtcgaaaat
     2101 gccgggcgaa ctgggtcaaa tatcgaaaca aatccccgaa ggaacggctg aaaaagcgat
     2161 gggcaaagtg gaagccatca tcaactcgat gactccaaaa gaacgcgcca accctgccct
     2221 gctcaaagcc agccgcaaac gccgtattgc aatgggtgcg ggcacgaccg tacaggaagt
     2281 gaacaaattg ctcaaacagt ttgaacaaat gcaacaaatg atgaagatgt tcagcggcaa
     2341 cggcttgggc aaactgatgc gtatggcgaa aggaatgaag ggaatgaaag gaatgttccc
     2401 gggtttgtaa gccgatttga ccgaaaacgc cgtctaaaat ttcagacggc gtttttgttt
     2461 tatattctga tttatagtgg attaacaaaa atcaggacaa ggcggcgagc cgcagacagt
     2521 acagatagta cggaaccgat tcacttggtg cttcagcacc ttagagaatc gttctctttg
     2581 agctaaggcg agccaacgcc gtactggttt ttgttaatcc gctatatatt ctgatttaaa
     2641 accataaggc tttaagcaat catctcttct ataaagccta aatacaaaag gccgtctgaa
     2701 atcctatttt cagatggcct ttactcattc aatcctcaac ttattgcggc tttttctgct
     2761 cttcgcgtac tttatccacc aactggtcaa tcgtggtcat accggactgc cagtctttaa
     2821 attcaacttg gtatttgccg ccgacaatca cagtcggtgt gccgctgatt tggaatttat
     2881 tggtcaactc ttccatttga gccgcacgcg cttggctttc aggagcctca aatgcagcca
     2941 atactttttt gccgtcaaac gctgtttgct cggacagcca ttttttcagg gtatcggtat
     3001 cggccagatt gattttttga ttaaccatcg catcgaaaat atggctgttg gctttatctg
     3061 attcaccggc catttccact gcggccgcca aacgtgccaa aggtttcatt tcatcacccc
     3121 acacgacatg ctcccggcgc atataggtat cgtctttaaa cgttttgatg tgctcgctca
     3181 agaccggctc aagatgggcg caatgcgggc agaagtagcc gaaaaattcc aatacttcga
     3241 ttttaccggc ctgctgttgc ggaataggcg tagacaatac agtgtagttc acaccttcgt
     3301 tcaactcaac aggggctgcc ggagcagatg agctgctttg gacgctgtct gccggaacgc
     3361 tggtttcagc ctgtttgcta caagcggcca atgccaacag ggtcaatgaa gtcaaagcta
     3421 aggttttcag tttcataggt atctcttgtg tgtcagatta atgtgcggat tttatggcat
     3481 tttattgaag gcgtgttcga tttgagtgaa aaaatgtgtt tagttttatt tcagccttta
     3541 taaaggccgt ctgaaatatg gcttagataa ttagccttat tttcagacgg cctttgttct
     3601 agtaatttac ggtttcggac attttgtctt caatccgtcg atgtgttcca ttaagtcagg
     3661 tgggacatga ttccacatag gatcaagaat aaaatcgata ccttcccgtc tggctaattt
     3721 ggctgctggg acaaaatcgg aatcaccaga aaacaagatg attttatcgg cttgtttttt
     3781 taaggtaata gatgaaatat ccaagcctat acgcatatct acaccttttt gtttaacatc
     3841 gagcacgaca tcgttttccg taatttgagt tgacgggttt ttcagaagat ttttcatgac
     3901 ttggggtttt aatatccatg ctgtattgtc cgacagcttg cctaaacgta acgctaattt
     3961 acgcttcttc ttcaattcgg tatgcagatt gcaacgaaat atggcttccg gagtctttga
     4021 aaaatctatg gcacgatgag atacgggatt gtgcattttc ttttcaaacg gcacgcagtc
     4081 gtaaaagaaa attctatata aatcatccat ttgatctgtg ccgttgattt tatctttcag
     4141 atgcagcatc gaatatcgga aagccaaatc gagacctttg caataacata ggttactaaa
     4201 attttatgct caatctcatt ttcaaaatgc aaaacttttc tgatttttcc tactttttgc
     4261 tcaatattag gaaagtttta ggcaattgaa aattttttgg cgcattttta tgcgtcaaat
     4321 ttcgttaaca gactattttt gcaaaggtct caaatcagca attctttttg catcgtgtgg
     4381 attttgagac aggcctaatg accgtacccg cttaataaaa aatgcaccgt caatcaaaat
     4441 ggcggttttc atattgcttc ccctatattt gtcaaagata taaaaaagcc cttgggatcg
     4501 gcatacccgc tatgatttaa tgggtaatgc gtactgccaa gggcgctatt tctttttgga
     4561 ttatactgat gtagataaag cctgtcaaaa agttcgtgtg ctgaatttac ggattatcag
     4621 gattttcaga cggcattctg ttgcacgaac gggattagaa actgtaatta acccgcgccg
     4681 tataagtgcg cggcgcgccg ggcatggcat ccgaacgcca atatttttga ttgagcagat
     4741 tggctgcggc aaaggtaatg ttaacatttt tatggttcca gccaagcatg gcatcaactc
     4801 gggcaaagcc tggaagcgta gtcacttctt taatttcttg agttgtaacc gtagcgtttg
     4861 cctgtaccgg ttacgccgat ttcgccgtag aggttttcgg tcggggtata acggaaaaac
     4921 aggttgccgg taacgttgct ggtgttattc aaatggatgc ccactcggtc gggattttct
     4981 ttgtcttcaa cgactttcgc ctgaatcacg cccaacgaac cgcgcagata gagttttttg
     5041 gggatgattt gcccgatggc ggacaattcc acgccacgcg aacggtgttt gccgccgact
     5101 gcccaagtgt agggattatt ttgtgcgtcg gggcggtagc ggatattgaa gcgttcgatt
     5161 tggtaggcgg acaatgtggt gctgaggcgg tcgtccagcc aactgctttt aacgccggtt
     5221 tcgtattggc gggtgtactc ggggtcagcg ttgaacacgg cagaagatga cgtatcgatg
     5281 ctcaaatagc cgccgcgtcc gccataaggc gcgaaacctt tgttatacga ggcgtaaagt
     5341 gtgtgaacgg ggttgatgtt ccacactgcg ccgatgttgg ggctgaacga gtggccgctg
     5401 tactggcggc tgctgccggt gagtttgttt tcggaattaa aggtgtattt gtcgtaacgg
     5461 ccgccgagga cgaatttcaa atcgggcgtg gcggagaaga tgttttgcac aaagatgccg
     5521 taggagtcgg ctttgtggcg gttttgggtg aggataggct gcaatctgcc cgaagccggc
     5581 cagcttgctc ggtcgtatgg atcgatggaa gcagtaaagg cgcggctgta acctaaggtc
     5641 gggttgcggt gttcgcggct gtaatccatg cctacggtca agtggttttc aaaacggccg
     5701 atggtgtagt cgccgtttag cgtgaaattg gacgacaggg ttttgttgtc ggtctgctgc
     5761 caggcgtagt tacgtttgat taagttgcca ttttcgctgc ctgcatagaa atgatcaaaa
     5821 tcctgcgccg ccgtgcggtg ggcgagctgc cattgggcac gccatttgtc gttgaaggcg
     5881 tattcaaggt cggagcgcca aacttgcagc ttgtctttga caaaatcgtt ccggtgggcg
     5941 aaccccatgc ggtaaggcag tccgaagcgg tcgtacacgg acttggtcgg actgcggtcg
     6001 ggcgtgcgct ccacattgtc gtaggtgtat tgccccgtcc acttcaagcc gttgtcgagt
     6061 ttgacggtaa tgctgggcga aaccatgaca tttttgctgt ctatgccgct gcggaacgaa
     6121 ttggcgcgcc cgacttcgcc ggtgagacgg atggcgacgt ttttgttcaa cacttcgtta
     6181 atgtccatat tcaggctgcg gtttgcccac gaaccgtaaa ccgcaccgat gttgcggctt
     6241 tgtttgaagt tggcgtattt gctgaccatg ttgatgacgc cgccgccgtt ggtgcggccg
     6301 taaagcacgg aagacgggcc tttcaggatt tccacgcgct cgatgttggc agtactgcgg
     6361 cgcacttgtc cgctttcgcg cacgccgtcg cggtaaatat cggatgcgtc ggcttgaaaa
     6421 ccgcgcagga aaatgctttc gccgcgcata tcgtaggcag cgtcgatgcc ggcattgcct
     6481 tcgaggatgg aactcaaatc gttcgtaccg taatttttgt ttttctggat attgagcgta
     6541 tcgatggttt gcggcgtttc tttgatgagc tgtccgttgc gggtaacggc ggcttcgtcg
     6601 tagttgatgt agcctttgag tacgctggtg tcggactgtc cgaccacgga aacggtgggc
     6661 agagtggcgg tgtaatgttc accattgtcc tgcgtatcgg cggcagcaac agggaaggaa
     6721 gcaataatca gcgtgggtaa taaagctaaa tgaaatgata ttttcatttt tatactcaat
     6781 ttaacaaaac aaccgaatta tattgcctca cggaggaaat gagaataatt tcttttaact
     6841 atattgaaca tgatatttgt aaacaaaggt ctcagaatgc ggaaaactcg ccgcctgata
     6901 ctgaaaaatg ccgtctgaac agggttcaga cggcattttt ttgaccgcga aattatgcgc
     6961 cgaacacttt caaacgttct gcaacgggtt caaaggtctt ttcacctgcc gccccttcaa
     7021 taccgccgat aaccatttgt gcgcgcaaca accagttttc ggggatattc cacgctttgg
     7081 caatcgccgc atcgggcaag ggattgtaat gttgcaggtt tgcacctacg ccgaccgcgg
     7141 caagtgtcgt ccaaacggca tactgcacca tagcgttcgc ctggtccgcc caaacgggaa
     7201 agttggcggc ataagcaggg aactgctcct gcaaaccttt gacaacattt tgatcttcat
     7261 aaaacaaaat agttgccgca cccgccttaa acaggttcaa tttttgcgcg gtcggttcaa
     7321 aactgtcggc aggcacgacg gcacgcagcg cgtcttcgac aaattgccac accttatcat
     7381 gctcttcgcc aaacagcacg accacgcggg cagattggga attgaacgaa gaaggtgtgt
     7441 gcaaaacggc gtgttcgacg atttggacaa cttcatcttt gccgacgggc aggtttttat
     7501 ttaacgaata aacggaacgg cggctttcgg cagcctgttg cagagattga cgggtcattt
     7561 cttttcctca aaaacattca acaaaataca ctttaggcag tccggttcag gctttacgct
     7621 tgaaaaacag cctgtccagc gaccatgctc cgccgcccgc tgccgcgata tagaggaata
     7681 cgaagcagaa cagcactgcg gactcgccgc cgttggcaat cgggaacaaa gcatttccgg
     7741 aagcgtgcgc cataaaatag gcaaccgcca tctgaccgga caaaacaaac gcggcagggc
     7801 gcgcaaacag gcccaacacc agcaaaatgc cgccgacaat ttctaaaata ccggcaagca
     7861 gcaacagccc gccgggcgaa ccgctgccca tttcaatggg gaaggcgaag attttcgacg
     7921 taccgtgcaa caaaaacagg taggcggtta cgatacgcaa aacagaaagc aaaaccggtt
     7981 ggatacggtt gcagcaatcg gacataaaag ctcctttgat atttgtcttc atttcaggcg
     8041 gtagagtata gatgtttccc cttttcaaat atatactgct tttattgata caacttttcc
     8101 acacaagaaa atatggacac cctgttcagc ctcaaggttt tccgccaagt cgtccaaagc
     8161 ggcggcttca cccgcgccgc cggcgcgctc ggcatctcca ccgcaatggc aagcaaacac
     8221 gtcagccact tggaaaacac cgtccaagcc aaactcctgc accgcaacag ccgcaacctc
     8281 agcctgaccg aagccgggga agaatactac cggcaatgca gttacgcgct cgacacgctc
     8341 gacgatgccg cgcaaaaagc cgccgggggg acggaaaaac cgcaggggct gctgcgcgta
     8401 acgatgccac tgtggtttgc cggcagccag atatgcaact ggctggcgga ataccgcgaa
     8461 cgttatcccg aagtgacatt agaactgatt ttggacaacc gccacgtcga tttgattgcc
     8521 gaaggcgtgg atttggcgtt gcgcgtttcc caaaccctgt ccccgtcact gattgcgcgc
     8581 ccactggcgg aaatcgaatt tgccctgctt gcctcgcccg acttcctgag gcgcaacggc
     8641 gtgccggaaa cgccggaaga agtggcgggg ctgcccgccg tcctgccgac ctacaccaac
     8701 cagcagaaac tcgacctcac ccgcaaatcg gacggcaaaa aataccggct tgaactgacc
     8761 cccgtcatcc gtaccgacaa cacgctgatg atgcgcgaaa tgattaaggc gggcgcgtgc
     8821 atcggttatc agccgctttg ggcggcggaa cacgatttgc gctgcggcac actggtgagg
     8881 ctgctgcccg gatacgccgt cccgaccgac cggctgaatg ccgtttatgc agacagggca
     8941 ttcttaagcg cgaaagtccg cagcttcatc gattttctga acgaaaaaat cgccagcagg
     9001 aaaggctgcc gaaatgccgt ctgaaaccgc ccgccccctt tatgcggaca cgtgcgccgc
     9061 acacacgctc gtctggttcc gccaaaacct ccgcatccgc gacaacgccg ccttatgcgc
     9121 cgccgttgcc gaaggtttgc ccgttatcgg tatttggatt gacgatgccg aaacagacaa
     9181 ccctcgccgc gccgcgttct accgccaatc cgccgccgaa ctcgcccaag ggcttgcagg
     9241 gcgcggcatt ccgttctaca cggcggcatc gcctgccggg cttgtccggc tcgccgtccg
     9301 cctcaatacc cgcgccgtca tcgccgacga atcccatact tttgccgaca aactcaccga
     9361 caacgccctt tggcatgagc tggacaaaca cggcatcgcg ttaaccttcg tcaacgaccg
     9421 cgccgttttc ggcaaaaccg acctgatacc cgacggcggc acggcatatg ccgatttcga
     9481 ccgctaccgc gaagtatggc tcgaccgctt ttccaagcag ccccccgccg gttcggacct
     9541 attcgcggca taccgccaac ccttccccga aaacctttcc gccccgcagc ctgccgtgct
     9601 ttcagacggc atcttcctgc cgcgaaacgg cggtgaaacg gcggcttggc ggcagtggcg
     9661 gcggtttctc gaacaggcgg attcctactc cgtcttaaag gatttcccct cgcgcaaaaa
     9721 cacttcgctg atgggcgcgt atttgagtgc cggctgcatc tcgccgcgcc tgctcgcgcg
     9781 gaaaagcctc gaacgccgtc tgaacgcgtg gacggacaac atcatccgcc gcgatttttt
     9841 ccttcaactt gccttgcagc acacggatga cgacccttca gacggcaatc ctgaacacac
     9901 cctgcgcctg acgctttggc agcagggccg gaccggcatt ccgattatcg atgccgcgat
     9961 gcgctgtttg cacaaaaccg gcagcctcca ccccgccctg agacgcttga gcgcggattt
    10021 tttctgccac gttttaaacc tcccccgccg cgaaggcgag atatggtttg cccggcagct
    10081 gaccgatttc gatgcagcaa tcaaccaagg caactggcgg cttgccgcct cacggcacac
    10141 ctgccccgac attgccgccg ccgcacacaa aaccgacccc gacggcacct ttgtcagacg
    10201 gcacattccc gagcttgccc acctgtccgc cgacaccgtc cacacgcctt ggcggtttgc
    10261 ctgttcggtc gatacccacg gctatcccgc ccatcctgtc gccggtattc cctaagcggc
    10321 acggcaacct aaaacaaatg ccgtctgaac ttccgtttca gacggcattg cgtccgaatg
    10381 actcaatatc ttccgttttt ttcactttca atcatcaggt atgcccaaat caccgccacc
    10441 caagccgaca ccgttcccat cgccggcaaa aaatgctgcc aatccgtcat cggcggcaca
    10501 gggcaacggc cgcattcgat ttccgcgccg cccaacaacc ggtacagcaa catatccgca
    10561 atccaaagca acaacgggta tttcaaacgc tgcaaccaaa aaaccaacca cgtccgcacg
    10621 attcacctca ccccccattc cgacaacgat attgtaccgc ttccgtgcaa tgttaaaata
    10681 agcccacttc taccgccgta caaaacgcca tgctcaccga tttagaaaaa aacgccatcc
    10741 gcgaccatta ccaaaacatc ggcaaaaacc tgcccggttt ccgtccgcgc gcttcgcagc
    10801 gggaaatgat tgcggcggtt gccaacgctt tttcgcggac gttggcgcgc gaagaaggcg
    10861 gcgagccgcc caagcgcgag ggcgagagca tcgccgtaat cgaagggccg accggcgtgg
    10921 gcaaatcgct tgcctacctg ctggcgggcg gcatcatggc gcagacgcgc ggcaagcggc
    10981 tgattgtgag cagcgcaacg gttgccttgc aggagcagtt ggtagaccgc gacctgccgt
    11041 ttttggtcga aaaaagcggt ttggaactga gcttcgcgct tgccaaaggg cgcggccgct
    11101 atctctgccc ctacaaactc tatcaactga cgcaaagcaa tgcccagcaa aacctgctcg
    11161 gctttgaagc ccccgccgtc ttgtgggaca gcaaacccaa gcccgaagaa ttgaagctgc
    11221 tgcgcgacat tgccgacgaa ttttctgccc gacggttcaa tggcgaccgc gacgcctggc
    11281 cggaaaaaat cgacgacgcg atttggctca aagtgaccaa cgaccgccac ggctgcctga
    11341 aaaccgcctg tcccaaccgt ccggaatgtc cgttttacct ggcacgcgat gtcttggaaa
    11401 ccgtcgatgt cgtcgttgcc aaccacgatc ttctgcttgc cgacatcagt atgggcggcg
    11461 gcgtgattct gcctgcgccc gaaaacagtt tctattgcat agacgaagcg caccacctgc
    11521 ccaaaaaagc cctcagccgt tttgccgccg aacattcatg gaatatggcc gtttggacgc
    11581 tggaaaaact gccgcagctg accggcaaga ttgccgcgct gaccgataaa gccgaacttg
    11641 ccaaccttgc cgacgaagcc gcctcatcct tactcgacag cctgcacgaa tggcagttcc
    11701 atttggcgga agagccgtct ttgagcttgg ggccgtctga aaacgacagg cggaccaaca
    11761 gcgaaccgac ttggctgtgg gaagacggta aaatccccga aggcctcgaa accaccgttt
    11821 ccaatacggc cattgctgcg cgcagcctgc tcaaacacgt tgtcgggctg aacgatgcgc
    11881 tttccgccgc gcgccgcgaa aaagaacagg acggcgcgct cctcgaccgc ctgaccggcg
    11941 atttcggcat cttcatcgcc cgtatcgaac aaatcagcgc ggtttgggat ttgctctcta
    12001 ccgttcccat tgagggcgaa gagccgttgg cgaaatggat aacccgccgc gccgacgaca
    12061 aaaacgacta cattttcaac gccagcccca tcagcagcgc gtcccacctc gccaacagcc
    12121 tgtggcggcg tgcggcaggc gcggtgttga cctccgccac cctgcaatcc ttgggcaact
    12181 ttaacctgat gctgcgccaa accgggctgc aatggctgcc tgaaaccacc accctcgccc
    12241 tcaaaagccc ctttgacttt gaaaaacagg gcgaactcta catccccccc atatacgcca
    12301 gccccaaaga ccccgaagca cacaccgccg ccgtcatcga gtggctgccc aagcttattt
    12361 cgcccaccga agccatcggc acactcgtcc tgttttcctc gcgcaaacaa atgcaggatg
    12421 tcgccctgcg cctgcccgga gactacctgc cgctcctgct cgtacaaggc gaattgccca
    12481 aagccgtcct cctgcaaaaa caccaccggg ccatagaaga aggcaaagcc agcatcatct
    12541 tcggactcga cagctttgcc gaaggactcg acctgcccgg caccgcctgc gtgcaagtca
    12601 tcatcgccaa actccccttc gccatgcccg acaaccccat cgaaaaaacc caaaaccgct
    12661 ggatagaaca gcgcggcggc aaccccttca tcgaaatcac cgtccccgaa gccggcatca
    12721 aactcatcca ggctgtcggc cgcctcatcc gcaccgaaca agactacggc cgcgtaacca
    12781 tcctcgacaa ccgcatcaaa acacagcggt acggccaaca attattagcc ggcctgccac
    12841 cgtttaaaag gatagggtaa acctaccgcc cttcccgcaa cagaaaggaa aagtcatgaa
    12901 cttcacccga ctgctcaacc aagtcttaag cacggttcaa aaaaaaggca acacattctc
    12961 cgacagcccg ctcaattcat tcggcggagg cgcgctggtt gccggtgtcg cctccatgct
    13021 actgaacggt aaaaaccgca aaaccatcac caaaatcggt tcgaccgccg ctttgggcta
    13081 cctcgcctac cggggctatc agatgtggca gcaaaacaaa gggcaggcaa ccgtaacaca
    13141 aagcgatttc caacctgccg gagaaactga agaaacatac agccgcaccg tattgcgcac
    13201 catgatagcc gccgccgctt cagacggcat gatagacgaa gccgaacgcc ggactatcga
    13261 acaggaaagc ggcacagacc ccgaaactgc cgcatggctc gccgccgaat accgcctgcc
    13321 cgcaagcatc ggggacatcg ccaccgccgt cggcaacgat gaggcgttgg cggcggaggc
    13381 ctatctggcg gcaaggttgg tctgtgccga tttgtcgcgg aaagaaaccg tcttcctcgc
    13441 ccgcctgtcg caggctttga aactggatga caatctggtg gagagtttgg aaaggcaatt
    13501 ggggttttga tgacacagct ggggagggaa aatcatcaaa aaacggttat tccgaccccg
    13561 gcctcaaaac ggc
//
LOCUS       DBBZYD010000056        13403 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.056, whole genome shotgun sequence.
ACCESSION   DBBZYD010000056 DBBZYD010000000
VERSION     DBBZYD010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.056"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..106
                     /locus_tag="ACJJDL_001326"
     CDS             <1..106
                     /locus_tag="ACJJDL_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HGG7574042.1"
                     /translation="KVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
     gene            117..1087
                     /locus_tag="ACJJDL_001327"
                     /pseudo
     CDS             117..1087
                     /locus_tag="ACJJDL_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
     gene            complement(1138..2190)
                     /gene="sohB"
                     /locus_tag="ACJJDL_001328"
     CDS             complement(1138..2190)
                     /gene="sohB"
                     /locus_tag="ACJJDL_001328"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HGG7574043.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(2294..2383)
                     /locus_tag="ACJJDL_001329"
     tRNA            complement(2294..2383)
                     /locus_tag="ACJJDL_001329"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2347..2349),aa:Leu,seq:taa)
     gene            complement(2486..2559)
                     /locus_tag="ACJJDL_001330"
     tRNA            complement(2486..2559)
                     /locus_tag="ACJJDL_001330"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2525..2527),aa:Cys,seq:gca)
     gene            complement(2585..2660)
                     /locus_tag="ACJJDL_001331"
     tRNA            complement(2585..2660)
                     /locus_tag="ACJJDL_001331"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2625..2627),aa:Gly,seq:gcc)
     gene            complement(2682..2757)
                     /locus_tag="ACJJDL_001332"
     tRNA            complement(2682..2757)
                     /locus_tag="ACJJDL_001332"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2722..2724),aa:Gly,seq:gcc)
     gene            complement(2781..2856)
                     /locus_tag="ACJJDL_001333"
     tRNA            complement(2781..2856)
                     /locus_tag="ACJJDL_001333"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2821..2823),aa:Gly,seq:gcc)
     gene            complement(2882..2957)
                     /locus_tag="ACJJDL_001334"
     tRNA            complement(2882..2957)
                     /locus_tag="ACJJDL_001334"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2922..2924),aa:Gly,seq:gcc)
     gene            complement(3037..3600)
                     /gene="pgsA"
                     /locus_tag="ACJJDL_001335"
     CDS             complement(3037..3600)
                     /gene="pgsA"
                     /locus_tag="ACJJDL_001335"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HGG7574044.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            complement(3706..4129)
                     /locus_tag="ACJJDL_001336"
                     /pseudo
     CDS             complement(3706..4129)
                     /locus_tag="ACJJDL_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4263..4328)
                     /locus_tag="ACJJDL_001337"
                     /pseudo
     CDS             complement(4263..4328)
                     /locus_tag="ACJJDL_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(4461..4796)
                     /locus_tag="ACJJDL_001338"
     CDS             complement(4461..4796)
                     /locus_tag="ACJJDL_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HGG7574045.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            4925..5830
                     /gene="mtrA"
                     /locus_tag="ACJJDL_001339"
     CDS             4925..5830
                     /gene="mtrA"
                     /locus_tag="ACJJDL_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HGG7574046.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     VVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(5892..6380)
                     /locus_tag="ACJJDL_001340"
     CDS             complement(5892..6380)
                     /locus_tag="ACJJDL_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HGG7574047.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            6527..7429
                     /locus_tag="ACJJDL_001341"
     CDS             6527..7429
                     /locus_tag="ACJJDL_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7574048.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLAEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(7470..8600)
                     /locus_tag="ACJJDL_001342"
     CDS             complement(7470..8600)
                     /locus_tag="ACJJDL_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7574049.1"
                     /translation="MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            8805..11429
                     /gene="alaS"
                     /locus_tag="ACJJDL_001343"
     CDS             8805..11429
                     /gene="alaS"
                     /locus_tag="ACJJDL_001343"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HGG7574050.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYVSDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSMD
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGDAYPELKEKQVQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAILANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELAKAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKPLTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPEMLVSVESWLCQKLS"
     gene            11491..12222
                     /locus_tag="ACJJDL_001344"
     CDS             11491..12222
                     /locus_tag="ACJJDL_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574051.1"
                     /translation="MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYH
                     SSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDK
                     NYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEV
                     LSAAQSLANIYCNKVRLIDGHVWKE"
     gene            12529..>13403
                     /locus_tag="ACJJDL_001345"
     CDS             12529..>13403
                     /locus_tag="ACJJDL_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IIL restriction-modification enzyme MmeI"
                     /protein_id="HGG7574052.1"
                     /translation="MKTLLQLQTAAQNFAAYYKDQTDERREKDTFWNEFFAIFGIDRK
                     NVAHFEYPVKDPADNTQFVDIFWEGIFLAEHKSANKNLTKAKEQAERYLQEIGRTKPS
                     ALPEYYAVSDFAHFHLYRRVPEEGVENQWQFPLEALPEYITRGVFDFMFGIEAKVRQI
                     QEEADIQAAAAIGRLHDALKEEGIYEEHELRLFITRLLFLFFADDSAVFQRNYLFQDF
                     LESCKETDTLGDKLNQLFEFLNTPDQKRSKTQSEKFKGFEYVNGGLFKERLRTFDFTA
                     KQHRALIDCGNFDWR"
BASE COUNT         3382 a         3506 c         3206 g         3309 t
ORIGIN      
        1 caaagtattt gccacattcg gcgacaagcg cacaacccgg ctgtttgccg atttggatgc
       61 actggctgaa gtgatggaaa aaacaatctc ggaaaataaa aaataggggg gcaaatatgt
      121 ggaaaatgtt gaaacacata gcccaaaccc accgcaagcg attgattggc acattttccc
      181 tggtcggact ggaaaacctt ttgatgctgg tgtatccggt gtttggcggc cgggcgatca
      241 atgccgtgat tgcgggggag gtgtggcagg cgttgctgta cgctttggtt gtgcttttaa
      301 tgtggctggt cggtgcggcg cggcggattg ccgatacacg cacgtttacg cggatttata
      361 ccgaaatcgc cgtgccggtt gtgttggaac agcggcagcg gtaagtcccg cattcggcaa
      421 tatagtggat taaatttaaa ccagtacggc gttgtctcgc cttgccgtac tatttgtact
      481 gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actataactg cgcgggttgc
      541 cctgtcgcgt gagtttgtca gcttttttga agaacacctg ccgattgccg cgacatccgt
      601 cgtatccata ttcggcgcgt gcatcatgct gctggtgctg gaattttggg tcggcgtgtc
      661 ggcggtgggc atacttgcgt tgtttttatg gcttttgcca cgttttgcgg ccatcagcga
      721 aaacctgtat ttccgcctga agaacagctt ggaacgcgac aaccacttta tccgaaaagg
      781 cgaccggcgg cagctgtacc gccattacgg actgcttgcg cgcctgcgtg tgctgatttc
      841 caaccgcgaa gccttcggct atctctgcgt cggcacggcg atgggtattt tgttcggctt
      901 tgcttttgtg atgatgacgc tcaaaggcta cagcagcgcg gggcatgtct attcggtcgg
      961 cacttatctg tggatgtttg ccatgagttt ggacgacgtg ccgcgattgg tcgaacaata
     1021 ttccaatttg aaagacatcg gacaacggat agagtggtcg gaacggaaca tcaaagccgg
     1081 aacttgaaaa atgccgtctg aacacgcttc agacggcatt tccatccgtt cggcaaacta
     1141 catcacatcc gcccgccggt tgacaagttt ggcaaacaac ttttcaacag aagcttccgc
     1201 ctgcaaacca atgcgctgga tcaggctttg cttctcctga tatttcactt cgataacctg
     1261 tttgttttca aacgctttca acaacaaatc atcactggtc gaaatctcgt caatcaagtt
     1321 caacgccaac gcctgccgac cgaaccaatg ctcgcccgtt gccacttcct caatatccaa
     1381 ttgagggcgg ttctcgctga caaactgctt gaacaactga tgcgtttcct ccagttcctg
     1441 tcggaatttc tgtttgccct tttccgtatt ttcacccata aaagtaaccg tgcgcttaaa
     1501 ttcgcccgcc gtcatcacat ccacatcaat atcatgtttt ttcaacaggc ggtggatatt
     1561 cggtacttcc gccaccacac ccaccgaacc gacaatcgca aacggagcgg aaacaatttt
     1621 atccgccaca cacgccatca tataaccgcc gctcgccgcc accttatcga cggcgacggt
     1681 cagcggaata ttgcgttcgc gcaaacgcct aagctgtgaa gccgccaaac cgtaaccgtg
     1741 aaccacgccg cccggacttt ccaatctaag cagaacctca tcttcaggct tggcaatcaa
     1801 aagcaccgcc gtaatctcat gacgcaagga ttctacggcg tgtgcataca aatcgccgtc
     1861 aaaatccaac acaaaaaggc gggatttttg cgtttcggca gatttctccc caccctcctt
     1921 caaacgcttt ttctctgctt tggcttccgc cttttccttt ttcttttcct ctttttcctg
     1981 atgttttgcc tcttccccgc ttaaaaagaa tgcttcaaac gattgccgct gttttttata
     2041 attttccgaa aaatccgtca gtacgacact gccgctttcc gactgtttct tactctgtac
     2101 gatagccaac acaatcagcg caattgcgcc gaacacggta agcagttcga gcaggaaaat
     2161 accgtaattc agtaaaattt ctttccacat tgattggatt tcctcttgtt caggcatgaa
     2221 catgtcaata ttgtccatca ccgtccgaca gataaaaaaa taaccgcttg gagcggcatt
     2281 gtcattttca gcttggtgcc cggagccgga atcgaaccgg cacgggatgt ttagtcccga
     2341 cggattttaa gtccgttgtg tctacctatt tcaccacccg ggcatttgtg aaaggtggag
     2401 gcgggggcgc ggattttaac cggcctatat gaagattgca ctcctcatag cataaacact
     2461 ctgccacccc gccatagtac gataatggag gcgagagtcg gaatcgaacc ggcgtagacg
     2521 gatttgcaat ccgctgcata accactttgc tatctcgccc taaaactggc ttatctaaaa
     2581 aacttggagc gggaaacgag tctcgaactc gcgacctcaa ccttggcaag gttgcgctct
     2641 accaactgag ctattcccgc gcgttcaaac atatcggttt ttggagcgga aaacgagtct
     2701 cgaactcgcg acctcaacct tggcaaggtt gcgctctacc aactgagcta ttcccgcgtt
     2761 gatatgtttg aaataaaact tggagcggga aacgagtctc gaactcgcga cctcaacctt
     2821 ggcaaggttg cgctctacca actgagctat tcccgcaatg attgtgggaa aatgaaattt
     2881 ttggagcggg aaacgagtct cgaactcgcg acctcaacct tggcaaggtt gcgctctacc
     2941 aactgagcta ttcccgcccg atttcattct ccaacatcga agagacgcaa ttattatgga
     3001 ttctgttttt gccgtcaagc tatttttatg tttttttcag gcgatttctt tccacgccat
     3061 tttcagataa tacagcatcg accagactgt cagcaaagat gcgataaaca tcaatacatt
     3121 gccgataaca acaagattaa atccgtaaaa atcgggaata ttcagcagca gcaggaagat
     3181 tgccagcatt tgcgcggcgg ttttgaactt accgacggtg gcgacggcaa cgctgttcct
     3241 tttgcccatt tgcgccatcc attcgcgcaa tgcggaaatg gtaatttccc tgccgataat
     3301 gatcatggca aacaaaacat aggtccggtc gagtttgacc agtaaaagta gcgatacggc
     3361 aaccatcagc ttgtcggcga cgggatcgag gaaggcgccg aaatcggaag tctgtttcca
     3421 cagtcttgcc aaaaatccgt caaaccagtc ggttaaggcg gcaacggcaa aaatgacggc
     3481 ggcggtgaga ttaatcgttt cctccgcgaa ccacggaaaa ggcaggtaaa aaagggctgt
     3541 catgacagga atgagcaaga ccctcaacca tgtgaggaag atggggagat tccaaggcat
     3601 cgattttctc tgtgcagact gtaaagttgt gattataacg gttatcctca taacccaaaa
     3661 cgtaaaattg ctgcatgggc attcccccgc cccgccaatc tgttttcaca ttcttttcaa
     3721 acgcaggaaa atggcgggca ataaaagcaa aatacccagt ttcaggctga aaacggcagg
     3781 ttgtgccaac acttcgacaa ggcggtcttc cgtgcgggca aaatctttat tgcttataga
     3841 cactgccact gttgcggtat tccaacagaa cgccgtttaa aaaacctttg ccgacggttt
     3901 cgcttaaaac ggctctaacc tgctccgccc tgatggttct gccgatattg ccgcctgtgc
     3961 acaaactgtc gaacccatag caggaaagcc ggtaatgctg cccgtctgca tccagtttga
     4021 ttgcccgtcc gctgcggttg ggggcggtaa cggtcaattc cgcatattct aatgtttttt
     4081 cttgttcgtg aaatgccgtc aggtaaggtg caataaaaac ggcggacaac agcagacagc
     4141 ttatggcggc aaaccatacc cagcgataat atagtggatt aacaaaaacc agtacagcgt
     4201 tgcctcgcct tagctcaaag agaacgattc tctaaggtgc tgaagcacca agtgaatcgg
     4261 ttccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgatttaa atttaatcca
     4321 ctatatttca cgcttacccc ttgtttctca aatgccgtct gaaaaaaacg gctgtatatg
     4381 ttgtctgcaa aatatcggga agcataacag acaaaatgcc gtctgaaata ttttcagacg
     4441 gcatttcaat ccgattcgga ttatttttgc gtttcaaccg cttccaatgc acgcagggcg
     4501 taagtgtaag cggcaccggc attcagggcg atggcggttg ccaatgcgcc ggcgatttcg
     4561 ctgtcggtcg caccggcttt ggcggcggcg gcggcgtgaa cactgatgca gctctcacaa
     4621 cgtgtggtaa tggcaacggc gatggcaatc agttcgcgcg ttttggcatc aagtgcttcg
     4681 gcggcggcgg cctgttccaa tgcgccgtag gcctgcagca ttttaggatg cgccttaccc
     4741 agctcgccga acgatttttt aaccaatgcg gtatgttctt tccaatcttt aaacattttc
     4801 ttttcctttc tcttgcgttt aaccctgata cgcgcttgcg tatctgtttt cgatgtgcgt
     4861 attattgcaa ttattcagtt gtgtttctcg tttaatcatc tcattttatg gttcaaaaag
     4921 atttatggac attctggaca aactggtcga tttcgcccaa ttgacgggca gtgtggatgt
     4981 gcagtgcctt ttgggcggac aatggtcggt acggcatgaa accttgcaac gcgaaggatt
     5041 ggtacacatt gttacatcgg gcagcggcta tctctgcatc gacggcgaaa cttccccgcg
     5101 tccggtcagt acaggggata ttgtattttt cccgcgcggc ttgggtcatg tgttgagcca
     5161 cgacggaaaa tgcggagaaa gtttacaacc ggatatgcgg cagcacggtg cgtttacggt
     5221 caaacagtgc ggcaacggac aggatatgag cctgttttgc gcccgtttcc gctacgacac
     5281 ccacgccgat ttgatgaacg ggctgcctga aaccgttttt ctgaacattg cccatccgag
     5341 tttacagtat gtggtttcaa tgctgcaact ggaaagcaaa aaacctttga cggggacggt
     5401 ttccgtggtc aacgcattgt cgtccgtcct gctggtgctt atcctgcgcg cctatctcga
     5461 acaggataag gatgtcgaac tctcgggcgt attgaaaggt tggcaggaca aacgtttggg
     5521 acatttaatc caaaaggtga tagacaaacc ggaagacgaa tggaatgtcg acaaaatggt
     5581 ggcggctgcc aatatgtcgc gcgcgcaact gatgcgccgt ttcaaaagcc gggtcggact
     5641 cagcccgcac gcctttgtga accatatccg cctgcaaaaa ggcgcgttgc tgctgaaaaa
     5701 aaacccggat tcggttttgt cggtcgcact gtcggtaggc tttcagtcgg aaacgcactt
     5761 cggcaaggcg ttcaaacggc aatatcacgt ttcgccgggt caataccgga aagaaggcgg
     5821 gcaaaaataa atcggggctt caaacgcaaa tgccgtctga aaaggctttc atacagcatt
     5881 tgcgtaccgc gtcatttcaa gggctgcatc ttcatcactt ccatcaaaaa gttggtaaat
     5941 gcggggttgt tgggtttgac atccatattt ttccaacgct gctgccagcc gcgcaaggca
     6001 ttctggatat acagcttgga ctgttccgta ttgattgcgc cccgctggct gtctatcgcc
     6061 gaacgcaggt agatttcata catactgtca tcgacggcat tgcgtccgac caggcgtttt
     6121 ctgaagttgt tcagatattg cgccgcctga accttggtca ttttaccgat acccacctga
     6181 tagcccaagc gcgtcgcttc atcgctgatt ttggcaacat ccgtccaatg cgaagaggca
     6241 aggcggaaac cttttgcagg tgcttccgtt ttgacggtat tgataggatt cacggggatt
     6301 tccgtcaatg tgggcacata aatagactgg cagccggaaa gaactgccac aatggaaaga
     6361 gggataaggt attttttcat gcccccatta taatcaagtt tgccttgaga aaacaaattg
     6421 ttcggcaaga aaaataaaat ttcggcatca gaagcaggca aaaacacatt ccacaagcct
     6481 tgccgcaagg tttacaatcc gaccgtcctt atcgcaacga ccgtttatgg ataccgcaaa
     6541 aaaagacatt ttaggatcgg gctggatgct ggtggcggcg gcctgcttta ccattatgaa
     6601 cgtattgatt aaagaggcat cggcaaaatt tgccctcggc agcggcgaat tggtcttttg
     6661 gcgcatgctg ttttcaaccg ttgcgctcgg ggctgccgcc gtattgcgtc gggacacctt
     6721 ccgcacgccc cattggaaaa accacttaaa ccgcagtatg gtcgggacgg gggcgatgct
     6781 gctgctgttt tacgcggtaa cgcatctgcc tttggccacc ggcgttaccc tgagttacac
     6841 ctcgtcgatt tttttggcgg tattttcctt cctgattttg aaagaacgga tttccgttta
     6901 cacgcaggcg gtgctgctcc ttggttttgc cggcgtggta ttgctgctta atccctcgtt
     6961 ccgcagcggt caggaaacgg cggcactcgc cgggctggcg ggcggcgcga tgtccggctg
     7021 ggcgtatttg aaagtgcgcg aactgtcttt ggcgggcgaa cccggctggc gcgtcgtgtt
     7081 ttacctttcc gtgacaggtg tggcgatgtc gtcggtttgg gcgacgctga ccggctggca
     7141 caccctgtcc tttccatcgg cagtttatct gtcgtgcatc ggcgtgtccg cgctgattgc
     7201 ccaactgtcg atgacgcgcg cctacaaagt cggcgacaaa ttcacggttg cctcgctttc
     7261 ctatatgacc gtcgtttttt ccgctctgtc tgccgcattt tttctggccg aagagctttt
     7321 ctggcaggaa atactcggta tgtgcatcat catcctcagc ggtattttga gcagcatccg
     7381 ccccactgcc ttcaaacagc ggctgcaatc cctgttccgc caaagataaa aaatgccgtc
     7441 cgaacatcct tcagacggca tatcgggctt tatttccccg ccttcacatc ctgccactgg
     7501 cgcaccataa acttcaatgc cgccggctgg ataggcacca tgataaagct gtttttcaaa
     7561 tcctcctcgg ttgggaaaat cgtattgtcg tttttaaatt cgtcttccat cagctcacgc
     7621 gcaggcttgc tcgaaggcgc gtaagtaacg aaattgccgt ttttcgccga cacttccggg
     7681 tcgaggaagt cgttgatgta tttgtgcgcg ttggcgacgt ttttcgcatc tttcggaatc
     7741 acgaaagaat ccacccaaat ccccacgccc tctttgggca tcatcacgcg gattttttcc
     7801 ttgccgcccg cttcttcggc acggcgtttg gcgatgttca aatcgccgcc gaaaccgatt
     7861 gttacgcagg tatcgccgcg cgccaaatca tcgataaagc cggacgaagt aaagcgtttg
     7921 atattggggc ggtttttctt gagtagggcg gttgcctccc tgatgtcttc cgtattgctg
     7981 ctgttcgggt ttttacccaa atagttcaac accataggat agatttccgc cgcgctgtcc
     8041 aaatagctga tgccgcattg cttgagtttg gacgtgtatt cggggtcgaa caccaaatcc
     8101 cactggttgt ccggcagctt gtccgtaccc aaagcctttt tcacgcgttc ggtattgatg
     8161 gcgaaggtat ttgtccccca ataaaacggc acggcgtatt cgtggccggg atcgaccccg
     8221 tccatcagcc tcatcatttc ggggttgagg tgtttataat tgggaatcag cgacttatcg
     8281 attttctgat acgcacctgc cttaatctgc ctgcccacaa acgcattgga cggcgcgaca
     8341 atgtcgtaac cagattttcc ggtcagcacc ttgctttcca gcgtttcatc gctgtcgtac
     8401 acatcataag taaccttgat gccgtttttc ttttcaaaat cggcaacggt ttccggatcg
     8461 acgtattccg accagttgta aattttcaat acgtttcggt tttccgccgg cgccggtttt
     8521 tcggcaggcg gtttgtccga accgccgcac gctgcaagca gcaaagcagt caggacggcc
     8581 aggggcagat gtttggtcat tatcattcct tgcatatcgg gttggagaaa gcggccatta
     8641 tagccgatat tggcaacagg gcttcagacg gcattcaaaa tcccgccaca ctcttccgaa
     8701 aaccgccgct tccatagcta gaaacaggga tttgcggtaa gataccgccg ttcgttttcc
     8761 ctgcttttac catgacaaga catttgagag acattgaaaa aattatgaaa acctccgaac
     8821 tgcgccaaaa attcctaaaa ttttttgaaa ccaaaggcca caccgtcgtc cgctcttcca
     8881 gcctcgtgcc gcacgacgac ccgaccctgc tgtttaccaa cgcgggcatg aaccagttta
     8941 aagacgtatt cttaggtttc gacaaacgcc cgtacagccg cgccaccacc gcgcaaaaat
     9001 gcgtacgcgc aggcggcaag cacaacgact tggaaaacgt cggctacacc gcccgccacc
     9061 acaccttctt tgaaatgatg ggcaacttct ccttcggcga ctacttcaaa cgcgacgcca
     9121 tccacttcgc ttgggaattt ctgacttccc ccgaatggct caacatccct aaagacaaac
     9181 tgttggcgac cgtttacgcg gaagacgacg aagcctacaa catctggttg aacgaaatcg
     9241 gtatgccgtc cgagcgcatc gtccgcatcg gcgacaacaa aggcgcgaaa tacgtgtccg
     9301 acaacttctg gcaaatgggc gacaccggcc cttgcggccc ctgctccgaa attttctacg
     9361 accacggcga agaaatctgg ggcggcattc ccggcagccc cgaagaagac ggcgaccgct
     9421 ggatcgaaat ttggaactgc gtatttatgc agttcaaccg cgacgaacaa ggcaatatga
     9481 atccgctgcc caagccgtcc gtcgataccg gtatgggctt ggaacgtatg gccgccgtca
     9541 tgcagcatgt tcacagcaac tacgaaatcg acttgttcca agacctgctc aaagccgttg
     9601 cccgcgaaac cggcgcagct ttcagcatgg atgaacccag cctgaaagtc atcgccgacc
     9661 acatccgctc ctgctcgttc ttgattgcag acggcgtgtt gccttccaac gaaggccgcg
     9721 gctacgtatt gcgccgcatc atccgccgcg ccgtgcgcca cggttacaaa ctgggtcaaa
     9781 gcaaaccgtt cttccacaaa ctggtggccg atttggtcaa agagatgggc gatgcctacc
     9841 ctgaattgaa agaaaaacaa gttcaaatcg aagaagcgtt gaaaaacgaa gaaagccgtt
     9901 ttgcccaaac gctggaaacc ggtatggctt tgttggaaaa cgcgttggct aaaggcggca
     9961 aaacactcga cggcgaaatc atcttcaaac tctacgatac ttacggtttc ccatacgatt
    10021 tgaccgccga catctgccgc gaacgcaata tcgaactgga cgaagcaggc ttcgagcgcg
    10081 aaatggaagc ccaacgcgca cgcgcacgcg ccgcccaaag cttcaaagcc aacgcccaac
    10141 tgccttatga cggtcaagac accgagttta aaggttatag cgaacgccaa accgaatcca
    10201 aagtcctcgc cctctacaaa gacggcgagc aagtcgacga attgaacgaa ggcgacagcg
    10261 gcgcagtcgt catcgacttt accccgttct atgcagaatc cggcggccaa gtcggcgacg
    10321 tcggctatat cttctcaggc gaaaaccgct ttgaagtacg cgatacccaa aaaatcaaag
    10381 cagccgtatt cggccaattc ggtgtacaaa cttcaggccg tctgaaagtc ggcgacagcg
    10441 ttaccgccaa agtggacgac gaaatccgca atgccaatat gcgcaaccac agcgcgaccc
    10501 acctgatgca caaagccctg cgcgacgtat tgggcgaaca cgtcgaacaa aaaggctctt
    10561 tggttaccgc cgaatccacc cgtttcgaca tttcccatcc ccaagcggta actgccgaag
    10621 aaattgccga agtcgaacgc cgcgtcaacg aagccatttt ggcgaacgtt gccgtcaatg
    10681 cagccattat gagcatggaa gacgcgcaaa aaaccggcgc gatgatgctt ttcggcgaaa
    10741 aatacggcga cgaagtgcgc gtactgcaaa tgggcggttt ctcaaccgaa ttgtgcggcg
    10801 gcacacacgt ttcacgcacc ggcgacatcg gcctcttcaa aatcatcagc gaaggcggta
    10861 ttgccgcagg cgtgcgccgt atcgaagcca tcaccggcct gaacgcactc aaatgggcgc
    10921 aagagcaaga gcgtttggtg aaagacatta ttgctgaaac caaagcccaa accgaaaaag
    10981 acgtactggc gaaaatccaa gcaggcgcgg cacacgccaa agccttggaa aaagagttgg
    11041 caaaagccaa agccgaactc gccgtccacg caggcgcaaa actcttggac gacgcaaaag
    11101 acttgggcgc agccaaactc gttgctgccc aaatcgaagc cgacgcagcc gccctgcgcg
    11161 aaatcgttac cgatttaacc ggtaaatccg acaacgccgt gattctttta gcggcagtaa
    11221 acgacggcaa agtctccctg tgcgccggcg tatccaaacc gttgaccggc aaagtgaaag
    11281 caggcgatct ggttaaattt gcagccgaac aagtcggcgg caaaggaggc ggccgtcccg
    11341 acttggcgca ggccggcggc acggatgccg gcaaattgcc cgaaatgctg gtaagcgtgg
    11401 aaagctggct ttgtcagaaa ttaagttaaa tttaaatctt aataagccat ttgagtcttg
    11461 ttcaaatggc ttatattttg gattgttaga atgaatacta aaacagagtt acaaaaactt
    11521 ttagaagagg atatatcaac tttaacagaa acactaattt gtgcagatgc tcttcctcca
    11581 agatatgtac gtagcattgc aactcctatt gtccgtcgat ggttaattga caaacaatta
    11641 aatattctcg caaaagaaat aggtttaact atagaattgc ccatccttga tacaagtttg
    11701 gtatttgaaa aattgtcaac cttagagaat aaagttaatt tttatatggc tggtggagtt
    11761 tatttaggcg gagaatttat tagctctata tatcattcat cacaagaatt ttctggtgaa
    11821 ccaataatct atgctgaacc aaatataatt ttatgtcctg ctgaaaaatt tttaacttta
    11881 aaacgagttt tccataatgg aaatattttt aatatgaatc agataattac ttttttatcc
    11941 aataaacaag gaggagtaca ttttgataaa aattacgata aatataaaac ttggcaagtt
    12001 gctatagaaa aagcagcaaa ttttttaaaa ctcggtaatc catataatga agataaatta
    12061 tctcttagtg aagaacatga tactatttta gtagttttac cattagaaaa aggatatgaa
    12121 tggaattgtc ttgagataga agtactatcc gctgctcaat ctctagcaaa tatctattgc
    12181 aacaaagttc gcctcataga tggtcatgtt tggaaggaat aaaagaaaaa gcatagttgg
    12241 taatttttag ttacgtaggg tgggcttcag cccaccgttt tttcattttt gattgttgat
    12301 tggtgggcta aagcccaccc tacggttact aaaatcccgt cattacctcg caggcgggaa
    12361 tccggtttgt tcggtttcgg ttttttaggg acagtgccgc aacattaaat ttccagattc
    12421 ccactttcgc acaaataaca gcgcaaatag ggcaaagata aggatatggg tttttttctt
    12481 tgaatttact atacaattcg cccgtccccg ttatagaaac ccaagccgat gaaaaccctg
    12541 ctccaactcc aaaccgccgc acaaaacttc gccgcctact acaaagacca aaccgacgaa
    12601 cgccgcgaga aagacacctt ctggaacgaa tttttcgcca ttttcggcat cgaccgcaaa
    12661 aacgtcgccc acttcgaata ccccgtcaaa gaccctgccg acaacaccca attcgtcgat
    12721 atattttggg agggcatctt ccttgccgaa cacaaatccg ccaacaaaaa cctgaccaag
    12781 gccaaagagc aggcggagcg ttatttgcag gaaatcgggc gcaccaagcc ctctgcgctg
    12841 cccgaatatt acgccgtcag cgattttgcc catttccacc tttatcgccg cgtacctgaa
    12901 gaaggcgtgg aaaaccaatg gcagttccct ttggaagcat tgcccgaata catcacgcgc
    12961 ggcgttttcg acttcatgtt cggcatcgaa gccaaagtcc gccaaattca agaagaagcc
    13021 gatattcaag cggcggcggc catcggcagg ctgcacgacg cgctcaaaga agaaggcatt
    13081 tacgaagaac acgagctgcg cctcttcatc acgcgcctgc ttttcctctt ttttgccgac
    13141 gacagcgccg ttttccagcg caactatctc tttcaagact ttttagaaag ctgcaaagaa
    13201 accgacacgc tcggcgacaa gctcaaccaa ctctttgaat tcctcaacac acccgaccaa
    13261 aagcgcagca agacccaaag cgaaaaattt aaaggtttcg aatacgtcaa cggcggcctg
    13321 tttaaagaac gcctgcgcac cttcgacttc accgccaagc agcaccgcgc cttaatcgac
    13381 tgcggcaatt tcgactggcg caa
//
LOCUS       DBBZYD010000057        13387 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.057, whole genome shotgun sequence.
ACCESSION   DBBZYD010000057 DBBZYD010000000
VERSION     DBBZYD010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13387
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.057"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(110..538)
                     /locus_tag="ACJJDL_001346"
     CDS             complement(110..538)
                     /locus_tag="ACJJDL_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HGG7574053.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(603..2351)
                     /locus_tag="ACJJDL_001347"
     CDS             complement(603..2351)
                     /locus_tag="ACJJDL_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HGG7574054.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNTDHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2678..4111
                     /gene="ccoN"
                     /locus_tag="ACJJDL_001348"
     CDS             2678..4111
                     /gene="ccoN"
                     /locus_tag="ACJJDL_001348"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HGG7574055.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4138..4749
                     /gene="ccoO"
                     /locus_tag="ACJJDL_001349"
     CDS             4138..4749
                     /gene="ccoO"
                     /locus_tag="ACJJDL_001349"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HGG7574056.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4754..4924
                     /locus_tag="ACJJDL_001350"
     CDS             4754..4924
                     /locus_tag="ACJJDL_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HGG7574057.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4948..5859
                     /gene="ccoP"
                     /locus_tag="ACJJDL_001351"
                     /pseudo
     CDS             4948..5859
                     /gene="ccoP"
                     /locus_tag="ACJJDL_001351"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
     gene            5935..6279
                     /locus_tag="ACJJDL_001352"
                     /pseudo
     CDS             5935..6279
                     /locus_tag="ACJJDL_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
     gene            6481..7890
                     /locus_tag="ACJJDL_001353"
     CDS             6481..7890
                     /locus_tag="ACJJDL_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HGG7574058.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYTMDEIHSDMMLGAAGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPSKGRARSWWRNLHGTFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7992..11201
                     /gene="recC"
                     /locus_tag="ACJJDL_001354"
     CDS             7992..11201
                     /gene="recC"
                     /locus_tag="ACJJDL_001354"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HGG7574059.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRLG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEYCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVHWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWRQPATIGEWVARCRDLLETLFQAEADDQKSVQNLE
                     NEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFESQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGAGAA"
     gene            complement(11271..12839)
                     /gene="mtrF"
                     /locus_tag="ACJJDL_001355"
     CDS             complement(11271..12839)
                     /gene="mtrF"
                     /locus_tag="ACJJDL_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HGG7574060.1"
                     /translation="MNQTDTRRGGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIYVVSLLNADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTLYPAP"
     gene            13171..13383
                     /locus_tag="ACJJDL_001356"
     CDS             13171..13383
                     /locus_tag="ACJJDL_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574061.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
BASE COUNT         3352 a         3223 c         3556 g         3256 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgtggtt taaacgtttc ggcttgtaat cagacgcggg
      121 cgttgtccag ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga
      181 tgatttcgtc aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc
      241 gcgtaccggt ccggcaatag gcaaggacgg gatattcggc ttgtccgatg agttggcgga
      301 aggtttcgac atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag
      361 taacgcctgc ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt
      421 cgcggtcggg gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat
      481 cggctttggt cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt
      541 tgtttccttt actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa
      601 gtttaaccga acaaccagtt gtccaacagg ttccggtctg tgatatgtag gatggcagta
      661 tccgctgccg ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag
      721 tggatattga tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag
      781 gcataaccgt ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg
      841 ccgccgttga agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca
      901 aaatcgcctg ccgacgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg
      961 ggaagcggca ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa
     1021 tcttcggtac tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc
     1081 tgacagcgga tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga
     1141 tagagtttgt ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc
     1201 agatcaaggc acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg
     1261 ctgttttcat ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc
     1321 tgcctcaaac ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa
     1381 taagattcgg gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta
     1441 ataccttcga atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg
     1501 aacgcggcag gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt
     1561 ccgagcaatg tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg
     1621 cggtcggcga gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg
     1681 acgtggagca ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct
     1741 gtttcgcaga tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg
     1801 ccgcttaagg caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag
     1861 cccatctcga caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc
     1921 cctgtttccg gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag
     1981 cggtgcggca gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa
     2041 ccgcgttctg tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag
     2101 cggatttgcc actcgccgcg tacggcggcg gcatgccagc ggtttttggc aatttgttcg
     2161 agcggcatgg acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc
     2221 cgaatcagat agctgcccgg aacccagttt ggcaggctta tttctatagg aagatcatca
     2281 tcttgtgtga atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta
     2341 taatgaatca taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg
     2401 cagcttaacc tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg
     2461 cggtcgggtt gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc
     2521 aaagggctcg tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa
     2581 atttagaaaa aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga
     2641 taaaaatctt tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta
     2701 caaagtggtg cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt
     2761 cggcgttatc gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc
     2821 ttggttccac ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg
     2881 cggttgcggc ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct
     2941 tttcggcggt tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc
     3001 cgtcgtcagc ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc
     3061 gatcgatatt ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat
     3121 tgccaaacgt aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt
     3181 ggcggtcgca cttttacaca tcgtcaacaa tatcagcatc ccggccggtt tgatgaagtc
     3241 ataccccgtc tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataatgc
     3301 cgtgggcttc ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca
     3361 agcagcccgc cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt
     3421 cacctatatg tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca
     3481 atctttgggt atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa
     3541 cggcatcatg accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt
     3601 cctgattgta tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat
     3661 taaaacggtc aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg
     3721 tgcgttgggc tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct
     3781 gttcggcaaa gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac
     3841 catcggcgtg gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat
     3901 gtggagttct ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg
     3961 caccatgcct tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg
     4021 cattatggcg tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat
     4081 ccctgcggtt tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg
     4141 aaattacaac aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta
     4201 gtcagtgtcg gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag
     4261 ccggcaccgg gcgtgaagcc ttacaatgcc ttgcaggttg ccggacgcga tatttacatc
     4321 cgtgagggct gttacaactg ccactctcaa atgattcgtc cgttccgtgc ggaaaccgag
     4381 cgttacggtc attactctgt tgccggagag tcggtttacg accatccttt ccaatggggt
     4441 tccaaacgta ccggtcctga tttggcacgt gtaggcggcc gctattccga cgaatggcac
     4501 cgtatccacc tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattccca
     4561 tggcttgcac gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt
     4621 aaagtaggta ctccttacag tgatgaggaa attgcgaaag cgcctgaggc tttggcaaac
     4681 aaatccgagc tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac
     4741 gtaaggtaac atcatggata ttaacggtat tcgcgctctt ttcacggtat ggatctttat
     4801 ctgtttcctg ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa
     4861 tgccgcaaac agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg
     4921 ttaatattgt gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc
     4981 tggaatatat atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg
     5041 ctgtctcaaa atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat
     5101 gagtgggacg gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt
     5161 gttttgacgt ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac
     5221 aaaggtctgc tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat
     5281 gagcaatacg gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa
     5341 gaccctcaag ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac
     5401 ggctctgatg ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg
     5461 ggcggtgatc ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct
     5521 gcctggggtc ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc
     5581 ctttcaaaac ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc
     5641 agcggtccgc ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt
     5701 ttgggtccga acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc
     5761 gaaaccatta ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa
     5821 gacaaactgc atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct
     5881 ccggtgaaaa aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct
     5941 gctcctgcag aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa
     6001 gccgaggaaa aagctgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt
     6061 tgtgccgcct gccatggcaa tgcgattccg ggtattcccc atgtaggcat caaagccgat
     6121 tgggccgacc gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc
     6181 aatacgatgc ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg
     6241 gttgactata tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt
     6301 atcggttatg aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc
     6361 ggttttaaac gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt
     6421 agtctttatt gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta
     6481 atggatacac aaatcaaaac tgaagccgac aatcagagca accggcgtta tctgaccgtt
     6541 tggcggtggc atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt
     6601 acgggtttgg gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat
     6661 gttgtgccgc aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc
     6721 gttaatccgg aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt
     6781 gccgtgttcc gtgtcaacaa tgagggcaag gcaacgatgg tcgcggtcga tccttatacg
     6841 gcaaaagtgg tcagtaccat gccgcgcaat cagggttggt attacacgat ggatgaaatc
     6901 cacagcgata tgatgctcgg tgcggcaggc gattatcttt tggaaacggc agcatcgctg
     6961 acgattatca tgataatcag cggcttgtac ctttggtggg tgaaacggcg cggcatcaag
     7021 gcgatgctgc tgccgtcaaa aggcagggcg cgttcttggt ggcggaatct gcacggcacg
     7081 tttggaactt gggtgtcgtt gattttgctg ttgttctgcc tgtcgggtat tgcttgggcg
     7141 ggtatttggg gcggcaagtt cgtacaggct tggagtcagt tccctgccgg taaatggggt
     7201 gtcgaaccga accccgtttc agtcgtgccg acccacggcg aggtattgaa tgacggcaag
     7261 gttaaggaag tgccgtgggt tttggagctt acgcctatgc ctgtttcagg gacgactgtg
     7321 ggcaaagacg gcattaaccc tgacgagccg atgacattgg aaaccgtcga ccgctttgcg
     7381 cgggaaatcg gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta
     7441 tggactttgt cgcaggattc tatgagttac gacatgatca gcccgtttgc cgaccgcacg
     7501 gtacatatcg accagtacag cggcaaaatc cttgccgaca tccgttttga cgattacaac
     7561 ccgttcggca aatttatggc ggcaagcatt gcgctgcata tggggactct gggctggtgg
     7621 agcgtgttgg cgaacgtctt gttctgcctt gccgtcattt ttatcggtat cagcggctgc
     7681 gtgatgtggt ggaaacgccg tccgaccgga gcggtgggca tcgttccgcc ggcgcagaaa
     7741 gtcaagctgc cggtttggtg gatgatggca ttgccgctat tggcaatcgc actgctcttc
     7801 ccgaccgcac tgcttgccat tgccgtgatt tggctgttgg ataccttgct gctgtcgcgg
     7861 attcctgttt tgaggagatg gtttaaatga cccgatgccg tctgaagcgt tcagacggca
     7921 ttttgtttga aggcgggcgg gggaaaggct atataatccc gaatacttga ccacagcttc
     7981 tgtttgaaat catgttttat ctgtatcaat ccaaccgtct tgaaacgctg gcggcactgt
     8041 ttgcccgcat tcaaaaagtc aaaccgctga aatcggtttt acagcccgaa cagattattg
     8101 tgcagagtca ggggatgcgc cgctacctca atacctgcct cgcccgcgat ttgggcgtgg
     8161 cggcgaattt gtcgttcagc ctgcccgccg gtctgacgtg gaagctgatg aaaaaactga
     8221 ttcccggtat tccggaactc agcccgtttg cgcctgaagt gatgcgctgg cggctgttgg
     8281 atttgttccg cagcgaggca tttcggaata cggcagaatt tgaagatgtg aggaatgtgc
     8341 tgcaagacta tctgggcagc ggcgaatcgg cagattatca gcttgcggga cagcttgcgg
     8401 acatattcga ccaatacctc gtgtaccgtc ctcagtggat agacgcttgg cagcagggca
     8461 ggcggctcgg tttgggcgac gacgaaatct ggcagtccaa actgtggcgt tacctcgacg
     8521 atggcaggca gagcgcgccg caccgtgtcg cgttgtggga aaagctgttg gaatctttaa
     8581 gcagtgataa gctgcccgag cgttatttcg tgttcggcat ttccacgatg gcaccgatgt
     8641 atttgcagct tttgcacaag ctgtccgaat attgcgatgt gtttgtgttc gcactcaatc
     8701 cgagcgggat gtattggggc aatgtcatcg aagcggcgca aatcctcaaa ggcggcggcg
     8761 atcccgattt aactcaggca gggcatccgc tgctcgcctc attgggcaag caggggcggg
     8821 actttttcga ctttttgaac gaaatggaaa tagaaggaga aacgccggta tttgaagaag
     8881 gcgggcgcga tacgcttttg cacgccctgc aaaccgatat tcaaaacctg aaaatgccgt
     8941 ctgaaaatgt gggaagcgtc aacacgggcg acggctcgat acgcatcgtc tccgcacaca
     9001 gccccttgcg cgaattgcag atactcaaag acaagctgtt gaaaattctg catgaacatc
     9061 ccgattggca gccgcatgat atcgccgtat taaccccgaa catcgaatcc tatacgcctt
     9121 ttatcgaagc cgtgttcgga caggcgcagc ccggtgcgca ggcattgccg tattccgttt
     9181 cagacgtgaa aatcagccgc cgacaaccgc tgtttcatgc tttgtcatgc ctgttcgact
     9241 tgttggaaag ccgatttgaa gtcgataaag tgcttgtgct tttagaaacc gcacccgtgt
     9301 tgcgccgttt cggactgact gaggacgatt tgccgctttt gcacgatatg gttgccgatt
     9361 tgaacgttca ctggggtttg gacggagaaa tgcgcggcgg cacggatcag ctgtttacct
     9421 ggaagcaggc ggtagaacgc atgatattgg gctggatgct gcccgaaggc ggcaacccga
     9481 tgtggcagga tgtcagcgcg tggtatgccg acgtgaatca aaccgccctg ttcggacgtt
     9541 ttgccgccct cctcgaaacc ctgtcggata ttgtacggat atggcggcag cccgcaacga
     9601 tcggcgaatg ggtggcgcgt tgccgggatt tgcttgaaac attgttccaa gctgaagccg
     9661 atgaccaaaa gtcagtccaa aaccttgaaa acgaatgggt caaatggcag gcggaaacag
     9721 aattggcgca attttccgga cagttgccgc aacaaaccgt catccgccat atccgacgtt
     9781 tcctcgacag cgaaagcgag gcaggctttt tacgcggcgg catcaccttt tgcagtatgg
     9841 tgccgatgcg gagcctgccg ttcaaagtca tctgcctgtt gggtttgaac gacggagatt
     9901 ttccccgcaa taccaaagcc gccgtattcg acctgattgc caaacatccc gccaaaggcg
     9961 accgcgcccg ccgcgatgac gaccgctacc tcttcctcga agccctcatc agcgcgcgcg
    10021 aaatcctcta cctgtcctac atcgggcgcg acatccgcaa agacgaagag cttgctccgt
    10081 cttcgctgtt gggcgaactc atcgacacag ttgccgctat ggcgggcatc ggtagccgcc
    10141 aacttgcaca aaactggata gaacagcatc cgctgcaagc cttctcgcgc cgatattttc
    10201 aagaaggcgg acgttcagac ggcatattcg gcacgcgtac cgactacgcc actgcgctcg
    10261 gacaaacgcc cgaaccgccg caaccctttt tcgaccaacc cgtagaaaac gccgaacctg
    10321 ttgccgaaat cggacaggac gaatttatcc gtttctggcg caaccccgtc aaagtatggc
    10381 ttcagcagca gcttgcgtgg agcgaacccc atatcggcga agcctgggag cctgccgaac
    10441 ccttcgagtc gcaacacgcc gatcaaatcg ccgaaaccta catcgaagca cggcgcgaag
    10501 gacgggattt tgcccaaacc gccgcccgca tcggggcgga aagcctcctg ccgtcgggag
    10561 agttgggcag actttggcag cagaacttcc aaactgctgc caaacaaatc gacacggcgg
    10621 ttttaaacag ccccaaactg ccaccgcttt catatgccat accgtcggac gggcaaatcc
    10681 tgaaaggcag cttgggcaat ctgtaccgct gcggacaagt gttttacgcc tacggcaaac
    10741 ccaacgcgcc gcaacgtatc gcttttctgc tggaacacct gatattttgc gccgttatgc
    10801 cgtctgaagc cgaaacgcgg caaaccttta tcgtccaatc cggagaaacc gaaatattgg
    10861 cggaaatcgc gcaagacagg gcattgcagc tattgtcgga atggatggcg tttttcaata
    10921 tcgggcaaaa ccgcccgctg ccgttttttg ccaagacctc gcttgccgct gccgaagcgt
    10981 ttgcccaaaa acaagattgg gaagccgccc tgaaaaaagc ccaaaccgcc tattacggca
    11041 acaaagtcag caaagggcag aaagactata ccgaagtcgc cctcgtgttc ggcaacgcaa
    11101 gccaaaaccc actcgaacaa cccctgtttg aaaacctcgc ccgcctgctt gccgacacgc
    11161 ttgccgcagc ggaaaaaagg gaaggggccg gagcagcctg acgggatgga aaggcaaatg
    11221 ccgtctgaaa acagcaaaaa ggttttcaga cggcattttg tttatcgtgt ttaaggtgcg
    11281 ggatacaaag tgggtgcgcc gggaccgacg ggcaggccca aaacaaatac ccaaatgcag
    11341 aataaggcaa tccatgcaat taagaagaaa gcggaatacg gcaacatcat agaaatcagc
    11401 gtacccacgc ccgcatcttt tttgtatttg atcactgtcg ccataatcag cccgaaataa
    11461 ctcatcatcg gcgtaataat attggtaacg gaatcaccga tgcggtaagc ggcttgaatg
    11521 acttcgggcg cgtagccggc caacatcagc atagggacga aaatcggcgc agttaccgcc
    11581 cattgcgcgg aggcggagcc tatcatcaga ttgataaaag cacaaattaa aataaaaccg
    11641 ataaacaaca cgctgccgcc caagccgact tcttttaaga acgtcgcccc tttaacggca
    11701 atatattgcc caatattcgt ccaattaaaa aatgcgacaa attgtgcggc aaaaaagatg
    11761 atgaccaaat aaagccccag agtactcatc gattcggcca tcgcattaac gacttcctgt
    11821 tcgccgcgca aacttcgggt tacccggcca taaacaatgc ccggcagcgc aaacaacaag
    11881 aaaataaaaa caacaatcga ttttaaaaac ggcgaaccgg aaaccaatcc tgtttcagga
    11941 tgacgcaaaa taccgtcggc agggacgatg ctccaagcca atagggcgga taaggcaaca
    12001 aacaccacgc cagcccaaat taatccttta tattccaaag gcgtgatttc attggaatgc
    12061 cgaatgtctt tttcttcttg tgacaaatct gattgataag ggcccaattg cggttcgacg
    12121 attttttcag taacaaaata accaatcaaa gcaatcacaa acgtactggc taccataaaa
    12181 aaccagttgg cttcagggcc tacgacgtag tcgggatgga tgatttgcgc cgcctgttgg
    12241 gtgatgcctg ccaagagcgg atcgattgtg cctaagaaca gattggccga ataaccgccc
    12301 gaaacgccgg cgaaagccgc agccagaccg gcaagcggat ggcggccgag ggaatgaaag
    12361 atgatggcgg acaaagggat taggacgaca tagcccaatt cagaagcggt attagataaa
    12421 atccctgtaa aaacaaccat aaaagtagtg agtttgcgtg gagattttgt gagcaataag
    12481 cgcattaatg cggaaatcaa gcccgatttt tccgcaatcc ccacgcccaa taaagaaacc
    12541 aacaccgttc ccaacggcgc gaaaccggtg aaatttttaa cggtatgcgt caggattttg
    12601 atcaaaccgt cggcattgag caggctgaca acgtaaatca aaccgtcatc ggcacgtcct
    12661 ttcgcaccaa cagggcgcgg atcggggacg gatagtccga aatacgcacc ggcggcagag
    12721 gcaatcagca ataacacaat gaaaataata aaaagcgtaa ccgggtgcgg caacatattg
    12781 cccagccatt cgactgtgcg taaaaatcgt ccgccccgcc gcgtatcggt ttgattcatc
    12841 tgtttctcct taaaaaaata tatcgtgtgc attaaatttt tgaatgtaac atgaagtgtt
    12901 ttgtaagcaa actaaaataa tcgcatatgt atataaccgc aatagattaa aacagaaaat
    12961 gccctcatcg ttattatcgt aaaggcggga atccgaaagc tcgacgttaa agccttatca
    13021 ggaatgactg gaactcaaaa aacggtttcc cgctttcgcg gaaatggcgg gattttcggt
    13081 ttttatttgc aaaaatgccg gagaagaatg cagtttacat tttgaatggt attgttatta
    13141 attgtaaata aatattggaa ggtaaatgat atgaaaaatg aaattcaaaa aatcatggac
    13201 aaatataatc catggcatga agatgatttt gagtcgtatg aagacattgc caaagatgta
    13261 tcgctgatga cagataaaac gttcattgaa cattatttgt tagaagttta ttcagaagaa
    13321 aacggacatt ttgaccaaga gaatgtccat gcaatgatag aagaaattaa aaatgcaatt
    13381 tagtgaa
//
LOCUS       DBBZYD010000058        13287 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.058, whole genome shotgun sequence.
ACCESSION   DBBZYD010000058 DBBZYD010000000
VERSION     DBBZYD010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13287
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.058"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(84..737)
                     /locus_tag="ACJJDL_001357"
     CDS             complement(84..737)
                     /locus_tag="ACJJDL_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HGG7574062.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNKESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRCGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
     gene            complement(769..1281)
                     /gene="coaD"
                     /locus_tag="ACJJDL_001358"
     CDS             complement(769..1281)
                     /gene="coaD"
                     /locus_tag="ACJJDL_001358"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HGG7574063.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            complement(1405..2088)
                     /locus_tag="ACJJDL_001359"
     CDS             complement(1405..2088)
                     /locus_tag="ACJJDL_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HGG7574064.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPASAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFGSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            complement(2245..2511)
                     /locus_tag="ACJJDL_001360"
     CDS             complement(2245..2511)
                     /locus_tag="ACJJDL_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HGG7574065.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            complement(2584..3054)
                     /gene="rlmH"
                     /locus_tag="ACJJDL_001361"
     CDS             complement(2584..3054)
                     /gene="rlmH"
                     /locus_tag="ACJJDL_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HGG7574066.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVFLTEQLYRAVSILHNHPYHRE"
     gene            complement(3108..3494)
                     /gene="rsfS"
                     /locus_tag="ACJJDL_001362"
     CDS             complement(3108..3494)
                     /gene="rsfS"
                     /locus_tag="ACJJDL_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HGG7574067.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            complement(3553..4146)
                     /gene="nadD"
                     /locus_tag="ACJJDL_001363"
     CDS             complement(3553..4146)
                     /gene="nadD"
                     /locus_tag="ACJJDL_001363"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HGG7574068.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRAGVSDGIPPAAARYIREHGLYEK"
     gene            complement(4143..4742)
                     /locus_tag="ACJJDL_001364"
     CDS             complement(4143..4742)
                     /locus_tag="ACJJDL_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HGG7574069.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESQIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            complement(4771..6312)
                     /locus_tag="ACJJDL_001365"
     CDS             complement(4771..6312)
                     /locus_tag="ACJJDL_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7574070.1"
                     /translation="MDGRRWVVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFLDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
     gene            6705..8090
                     /locus_tag="ACJJDL_001366"
     CDS             6705..8090
                     /locus_tag="ACJJDL_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HGG7574071.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            8110..8628
                     /locus_tag="ACJJDL_001367"
     CDS             8110..8628
                     /locus_tag="ACJJDL_001367"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HGG7574072.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(8967..9884)
                     /gene="thrB"
                     /locus_tag="ACJJDL_001368"
     CDS             complement(8967..9884)
                     /gene="thrB"
                     /locus_tag="ACJJDL_001368"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HGG7574073.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACTRLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKVFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(9921..10649)
                     /gene="ubiG"
                     /locus_tag="ACJJDL_001369"
     CDS             complement(9921..10649)
                     /gene="ubiG"
                     /locus_tag="ACJJDL_001369"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HGG7574074.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            10801..12042
                     /locus_tag="ACJJDL_001370"
     CDS             10801..12042
                     /locus_tag="ACJJDL_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HGG7574075.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSALGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKMPVLFDTQAPVGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRQKFGAGKTYKVYGGLWLMVWVFLF
                     GIINIAAQVLSQMELVPVFKG"
     gene            12192..13247
                     /locus_tag="ACJJDL_001371"
     CDS             12192..13247
                     /locus_tag="ACJJDL_001371"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HGG7574076.1"
                     /translation="MKLKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFD
                     HGIPEYAMIEPHLVDQHRTLKKLRSFLFSSRLAQTRKNSAAKLIACHHADYADLLICG
                     GTHLGYLHHMAQKPNLLDRLAIRRNRSNYATAKLIMAHSHMMQRELVGLYGVPPERIQ
                     VAPPPADTERFFPQPRETAALRAKYGFADHETVFLFPSTGHTRKGLELLADFFEHTDL
                     PVKLAVVGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESVLCGT
                     RVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVAQAVSLKKQGGHRLSDPMRALNYN
                     PSLSHHIDRLTDILASV"
BASE COUNT         3064 a         4007 c         3345 g         2871 t
ORIGIN      
        1 tgaagagatt tgcagtcaac cgttttcttg aaaaattttt ataaaaatat ttatcatatt
       61 gtttataaat taatttatat ttattaacct gcttttgcca tataaaattc ttccagcgca
      121 tgagagatat tttcagtctg ccattcgttt tttaagggtg caacaatttc gatttgtcgg
      181 ttttggtagg caaattgtat tttccatgca tacagaaaca tggtttcgga ttctgttccg
      241 ccgtataagc tgtcgcccag aatcggactg cccaaacttt tcatcgccac tctcaattgg
      301 tgcgttttgc ccgtatgcgg ttctaggatg aacagccgca gtttttcggc gatactgatg
      361 ctgtggaatc gggtaacggc gatattttct gtattgcgcg tcaacttcca cattccacat
      421 ctggattttt ccattccgcc tttaatccaa ccctgctttt tggacggctt gcggtcggac
      481 agtgccaaat aggttttttt gatgcttttg ccggcaaact gtccgctaag ggcggacgcg
      541 ctttctttgt tgagggcaaa cagtaaaatg ccgctggtct gtttgtccaa tcggtgcagc
      601 agccacacac gctctacgcc caactgtatg gcgagtgttc gggccagtcc ggtctcgccg
      661 ctgtcttggt ggacggatat gccgcccggt ttgttgatgg cgacgaagtc ttgatggcgg
      721 aacaaaattt ccaacatatc catatatgcc ttgcaaaaat agaagggttc aattttcgtg
      781 ttgatgttcg gcaaggattt tttcgtacac agcttgcggc acgtagcggt ggatcgtttc
      841 cgtccagcct tccggcccga ccagtccttt gaccatagtg gacgacactt cggcgatttc
      901 gcgcggcggc atgaggaata cggtggatat ttcgggggcg aggtcgctgt tgatatggcg
      961 catggaacgt tcgtattcgt aatccgaagc agaacggatg ccgcgcacga tgaatcctgc
     1021 atctacctca cgggcgtaat gcaccaaaaa tcggttttca aatacatcgg ttctgacgtt
     1081 gggaaacatt ttagtaatat cgcacaacat atcctgcctt tcagcgacgg tataggtgct
     1141 gcgtttgtcg gggttaatgc cgatggcgac gatgagttcg tcaaacatag attgcgcctg
     1201 ccgtatcatc cacagatgcc ccaatgtggg cggatcgaaa ctgccggcat aaacggcgcg
     1261 gcgcggtgta ttcggtaaca tttgattcct cccggcttca tagtcggctg tgtgttggtg
     1321 cgtgtgcatc cgtattgtat gcccaaagta aaatgccgtc tgaagcagtt tcagacggca
     1381 tagtcggacg gcgttttacc ggcatcaatc ctcgccgttt aaagacaaca ggatgttcag
     1441 caggctgctg aagatgttgt aaagcgagat aaacagtgtc agtgccgcgc tgatgtggct
     1501 gtcttcgccg ccgtcgatga cggtgcgtac ctgccacata atcattaagg aaccgaacaa
     1561 gacaaaaccg gcggaaatgg tcagggcgag tgcgggaata cccaaaaaca gattggcaac
     1621 cacggcgacc atcagaatga ccgcacctac ggtcaggaag cgtccgagcg cgttcatatc
     1681 gagccgggtt cggcgcgcca aggcggacat cgttaaaaag acggcggcgg tcatcgcggc
     1741 ggcaatgccg acgattttcg caccgtcggc aatatggagc gcgtattgca gcacggggcc
     1801 gatcaatacg cccataccga atgtgaatac catcagcagg gtaacgccgg tattgctgta
     1861 acggtttttc tcgatgaagt ggatcatacc gtagaaaaac gccaacacga cggcaaaccc
     1921 tatccagcgc gaaccgaagg cggcgtaaaa attgaaaccg gcattggcgg caagtgccgc
     1981 gcctgcggaa gccggaataa atgaaaatcc gagcaggcgg taggttttct gcaggacggt
     2041 gtttttagaa accgtatgcg cggtgtagtc gtaaacgtcg tgttgcatat catctgctcc
     2101 tgaaagcgcg gttgggaata atgggggatt ttaacattgc ccaatgtcaa aatttgtccg
     2161 gttgcgtgaa gataaagttg tccggcgtat tttaaaggcc gtctgaagca gtttcggaca
     2221 gcctgtgttc aaaacggaaa accgttattg cggaacgtat ccctgaacgg catccgcgcc
     2281 gtcgccgaag aaatactgct ccatctgctg agccaggtat tcgcgcgcgc gcggatcggc
     2341 gaggcttaaa cggttttcgt taatcagcat cgtttggtgg cgcgtccacg ccgcccacgc
     2401 ttcttgcgat acgttttcaa aaatgcgctt gcccaattcg ttgggaagcg gcggaaattt
     2461 catgccttcg gcttctttgt tgagcttgac gcagaatacc atgcgtgcca tagcggattc
     2521 ctttgctgtg ttcagaaata acggggtgat tttaaccgat tagggatacg gacaaaagcc
     2581 ttcttattcc cgatgatagg gatggttgtg caggatggaa acggcgcggt agagctgctc
     2641 ggtcagaaag acgcgcacca tgccgtgcgg cagggtgagg ctggacaggc gcatcatcat
     2701 gcgggcttgt tgtttgaggc ggtcggtcat gccgtccgcg ccgccgatga cgaagcagac
     2761 gtgttcgccg ttttgccgcc agcttttgag gtgttccgcc agctcgacgg aggtcggcgc
     2821 tttgccgcgt tcgtcaagaa cgacgaggaa cgcgccttgc ggaacggctt cgaggatgcg
     2881 tttttcttcc gccgccatac cttgggcggc attcacgccc gcgccgcgtt tttcgggttt
     2941 gatttctttg agtgcgtagg cgacgtcgcg tccgaagcgt ttggcgtatt cggcgacggc
     3001 ctcatcaacc cagcgcggca ttttggtgcc gactgccaaa acggtaatgt tcaatgcttt
     3061 ctcccttaca ggaaaatgcc gtctgaacat tcagacggca tcgggaatca gtctgccgcg
     3121 tgccacggct tctgcattcc ggcgtgaaaa ctcggtttct cgccgcccca aagggtgtcg
     3181 atatcataga agtcgcgcac ggcggggagc ataacgtgga cgacgaggtc tcctgcatca
     3241 acgagcgtcc attcgccgct gtctccttcg gtactgagga tttcaaaacc ggcttctttc
     3301 aaatcgacgg caacgttgtt ggccagtgct ttgacttggc gcgtactgtc gccgctggcg
     3361 ataatcattc tggcaaacag cgaagttttg tcttgcgttt cgagaacgga aatgtctttg
     3421 gctttgatgt cttcgagggc gttgacggcg accccgacca ttttttgcag gtcttgcagt
     3481 tcttgttcgt tcattatttt cctaacggga tgttttcaga cggcattata gccgtttctt
     3541 actgatttga ctttattttt catacaaacc gtgttcgcgg atgtagcgtg cggcggcagg
     3601 tgggatgccg tctgaaacac cggcgcggcg gatttccgtt gacgacacat tatgcatcgg
     3661 ggcggacaag atgcggacgc tgccgtcctg aagggacttg cccagccacg cgtgcagttc
     3721 gcgcggggtt tggtgcaggc tgtcgccctg ccgcatggcg acggcgatat tggtttcgcg
     3781 cacgagcatc tgccattttt tccatgtgtg cagcttcatc aggctgtcgc tgcccatcag
     3841 ccaccagagt tgcgcggatg ggaactgctg gcggaagatt tggacggtat caaaagtata
     3901 ggttgcacct tctcggacga tgtcgcaatc gctgacggca aaacgcgcgt cttctgccgt
     3961 cgccagttcg accatggcaa ggcggtcggc ggcggaagcg gaggctgcgt ctttgtgata
     4021 cgggccgcct gccggcagga aaacaaccgc gtccaagccg atttcgtcgg caaaggcgcg
     4081 ggcgatgtgg agatgcccgt tgtgtatcgg gtcgaaagtg ccgccgaaca gtccgatttt
     4141 cttcatgatg tttccattcc ttccgataag tccatgccgt ctgaaacact gccgtccaca
     4201 accagcgtca gtttgccggt aacgggatgg atgaccagtc cgtgaacggc gatatggcgc
     4261 ggcatcagcg gatggttacg gataaggtcc accgtgtggc gcacgctgtc ttcgacgttg
     4321 tcgaaaccgg tcagccagcc gtcgaggtcg ataccggcat aacgcagggt ttcgatacgg
     4381 tcttcgggaa tctggctttc ccggacgcgc ccgaggaatt cttcggcatt cagcccctgc
     4441 ataccgcaat cgtgatgggc gatgaccata atctctctga ccttcaattc aaacacggca
     4501 accaaaagac tccgcatcac cgaaccccac gggtgcgtaa ccagcgcgcc ggcattttta
     4561 atcagcttgg catcgccgtt tttcaaaccc aacgcgtcgg gcagcagccc gataatccgc
     4621 gcatccatac aggacaaaac tgccagcccg cgttcggggt atttgtcggt aaagtatttt
     4681 tcatattcgc ccgactcgac aaactgccgg ttatgggcaa ggatgttatc caactcgctc
     4741 attttgccgt cctctgaaaa agggttcaca ttataacgtt tccgtctgtt ttccgccttc
     4801 gccgttgtcc aacagcagga aaatgcccag cgcgaacgcc gacaacagca atgtcaacac
     4861 cattgcccgc gcataattat cctcacccgc acgccccaaa taggcataaa tcaaagtcgt
     4921 cagcgtctgc cactcgggac gcgacaggaa caaggttgcc gcaaattcgc ccacgcaggt
     4981 tgccgccgcc aaagtcagac cgcgccgcaa cgccggtttc aagaggggga acgtgatgcg
     5041 gcatgccgtc tgaaagccgt ttgcacccaa acccgccgcc gccctgccgt aatccggcgg
     5101 cagtgcatcc caggctgata aaacatcttt tgccacaaac ggatacgcca gcagcgcata
     5161 catcgccagc agcagcggca acgaagccgt ccactgcgga taaagcagca gcacgcccgc
     5221 cgaaacacaa accggcgaca ccataaacgg caaaaacatc agcccgcgca tccacgccga
     5281 ccgccgcgcc gccgccgcat acaccacacc caaaaccgcc gccgcataca ccgccgccgc
     5341 cgagaagcgc aaagtattcc acaccgcctg ccacgtttca ctttccatta acacacgcca
     5401 cgattcgccg gccgaccacg ctttcacaac aattgccaac aaaggaaaca ggcagcacac
     5461 agacaacacc gccgccgcaa acgccagcag cacatattcc ccgaccgact gcggcggcga
     5521 cggcatcaca ggggaaaccg ccttatccga aaccgcgcgc ctgccgaacc acgcatacag
     5581 caaccctgcc gccgccgtta cccccaacac cagccacacc agcaccgaag caaccgccat
     5641 atcgagttcg aacatgacca actggtaaat ttccacttcg accgtggcat aacggctgcc
     5701 gcccagcagc aatgccagcc cgaaccccga aaaacaatac aggaagacaa ggcacacgcc
     5761 gccggcaagc cacgggcgca aaacgggcat ttcaatgtcc aaaaaccgcc gccacgcccc
     5821 cgcgcccaac gtccgtgccg tctgaagccg tgccgcaggc acttgcacaa acccctgata
     5881 cgccgccctg accaacacag gaaggttgaa aaacacattg ccgtacaaca acagatacgg
     5941 cgtatcctgc ctgccgcgcc acaacagccc gtccgccccg aacagggcca gcacgcccac
     6001 gcccgccacc aacgtgggca tcacaaaagg cagcatcagc aggcgcagca ccaaagcccg
     6061 ccccggaaac gccagccgcg ccagcaccca cgcgacaggc acgcccaaag gcagcaccag
     6121 cacacaggtt gccgctgcct gaaataccgt ccacgccaaa cgtttgagca tataggcatc
     6181 cgacagcacc gcgcgccacg ccaaaccgtc atacgccgcc accgcccaca aaggcgcaac
     6241 gaccattacc gccaaaaaag ccgaaggcag cagggcaaaa gcaccccata ccacccaacg
     6301 ccgtccatcc atcgccttcc ccacttgaaa cactgatgtt gcgattgtac ccaaaagccc
     6361 ccacataccg tatatttcaa tccgactaca taccgtatcc gccttcctcc cgccgtctga
     6421 aatatagtgg attaacaaaa atcaggacaa ggcgacgaag ctgcagacag tacaaatagt
     6481 acggaaccga ttcactcggt gcttcagcac cttagagaat cgttctcttt gagctaaggc
     6541 gaggcaacgc cgtactggtt tttgttaatc cactataaat cgttcaaata aacaggaata
     6601 taacttcaga caaacaactt accgcccgat ttgtgctatc gttttcgcac aacttaaaaa
     6661 aacctgacaa ttttgtactt ttattacaga gaaaggcttt acaaatggac ggctggacac
     6721 agacgctgtc cgcgcaaacc ctgttgggca tttcggcggc ggcaatcatc ctcattctga
     6781 ttttaatcgt caaattccgc atccacgcgc tgctgacact ggtcatcgtc agcctgctga
     6841 cggctttggc aaccggtttg cccacaggca gcattgtcaa cgacgtactg gtcaaaaact
     6901 tcggcggcac gctcggcggc gtggcgcttc tggtcggcct gggcgcgatg ctcggacgtt
     6961 tggtcgaaac atccggcggc gcacagtcgc tggcggacgc gctgatccgg atgttcggcg
     7021 aaaaacgcgc accgttcgcg ctgggcgttg cctcgctgat tttcggcttc ccgattttct
     7081 tcgatgccgg actaatcgtc atgctgccca tcgtgttcgc caccgcacgg cgcatgaaac
     7141 aggacgtact gcccttcgcg cttgcctcca tcggcgcatt ttccgtcatg cacgtcttcc
     7201 tgccgcccca tccgggcccg attgccgctt ccgaatttta cggcgcgaac atcggccaag
     7261 ttttgatttt gggtctgccg accgccttca tcacatggta tttcagcggc tatatgctcg
     7321 gcaaagtgtt ggggcgcacc atccatgttc ccgttcccga actgctcagc ggcggcacgc
     7381 aagacaacga cctgccgaaa gaacctgcca aagcaggaac ggtcgtcgcc atcatgctga
     7441 ttcccatgct gctgattttc ctgaataccg gcgtatcggc cctcatcagc gaaaaactcg
     7501 taagtgcgga cgaaacctgg gttcagacgg caaaaataat cggttcgaca ccgatcgccc
     7561 ttctgatttc cgtattggtc gcactgtttg tcttgggacg caaacgcggc gaaagcggca
     7621 gcgcgttgga aaaaaccgtg gacggcgcac tcgcccccgt ctgttccgtg attctgatta
     7681 ccggcgcggg cggtatgttc ggcggcgttt tgcgcgcttc cggcatcggc aaggcactcg
     7741 ccgacagcat ggcggatttg ggcattcccg tccttttggg ctgtttcctt gtcgccttgg
     7801 cactgcgtat cgcgcaaggt tcggcaaccg tcgccctgac caccgccgcc gcgctgatgg
     7861 ctcctgccgt tgccgccgcc ggctttaccg actggcagct cgcctgtatc gtattggcaa
     7921 cggcggcagg ttcggtcggt tgcagccact tcaacgactc cggcttctgg ctggtcggcc
     7981 gcctcttgga catggacgta ccgaccacgc tgaaaacctg gacggtcaac caaaccctca
     8041 tcgcactcat cggctttgcc ttgtccgcac tgctgttcgc catcgtctga cagacggaaa
     8101 ggatagtaaa tgactacgca ttttgtcgtt atgggcgtat gcggctgcgg caagaccacc
     8161 gccgcgctgt ccctgcagaa acacctcggt caatgtccct atgccgaagg cgacgagttc
     8221 cacacccaag ccaaccgcga caagatgggc gcgggtattc cgctgaccga tgaagaccgc
     8281 tatccgtggt tgggcaatct gcgcgactgg atgacgcaac aggcgcaaaa cggtgcgaac
     8341 cacaccatcg taacctgttc cgccctcaaa cgcggctacc gcgacattct gcgcggagcc
     8401 gaaggcaaag ctgccttcat ccacctcagt ccgccgcaag acatcaacct cgagcgcatg
     8461 atgtcgcgca aaggacatta catgaaagca gggatgctcg attcgcaact ggaaatcctc
     8521 gaggaactgg gcgaaggcga atacggggtc aaaatcgcca accccggcac gcccgaagcg
     8581 gtcgaagccg atattctgaa ctgggttgcc tcggaaaacc tgctttgaag caatatgccg
     8641 tctgaagccc gacacaggat gggtttcaga cggcataaac atcgggaaca gaatggatta
     8701 cattgattta tagtggatta acaaaaacca gtacagcgtt gcctcgcctt agctcaaaga
     8761 gaacgattct ctaaggtgct gaagcaccga gtgaatcggt tccgtactat ctgtactgtc
     8821 tgcggcttcg tcgccttgtc ctgatttttg ttaatccact ataaaatgga aaatacccgg
     8881 ctatcgtctc attttcgttt taatcagcca taaaaatgcc gtctgaaacc ctttcagacg
     8941 gcatttctgt caaacgccgg acgcactcaa tccaaactca acagcaggtt gcggaacgcg
     9001 ttcgggtctt tgataaacgt catctcgccc gcctgcggaa aatgaaagtc caacaggcgc
     9061 gacacccaaa aacggatgca gccggcacgt tgggcggtcg ggaaatacgc cttttcttcg
     9121 gcactcaagg ggcgcacgcc ctcataaccg ccgataaaca cctttttcaa cgcctcatcc
     9181 aacttattgt ccgccgtcct tgcccaatcg ttgaccgcaa tcgccaagtc atacataaaa
     9241 ttgccccggc aggcataata gaaatcgatg aaacccgata cctgaccgcc gtcaagcaac
     9301 acattgtctt taaacaaatc ggcatggatg atgcccgaag gcagatgatt gccgagattg
     9361 tcctttaacg catcgatttc ggaacacagc agcgcggcat cgtcttgcga caggacgggc
     9421 agcagccggg tgcacgcctc cgtccaccac gcatcgtaac gcgggttttc catttccaaa
     9481 gggaaatcgg cggcggcaag gtgcattttg gccagcatcg caccggtatg gaaacactgc
     9541 tccgccgtcg gcagcgcggt atccgaacct ttcaggcagg caaccaaaca agccggcttg
     9601 cccgccaaaa cggaatcaag ccggccgtct ttgcgcgcaa ccggcgcggc aaccgccacg
     9661 cccttcatac tcaaatgccg gttaagctcc agaaaaaacg gcagctcttc ctgtttcaac
     9721 acttcaaaca cggtcagcac ataacgtccc gaagtcgtcg tcagaaaata attgctgttg
     9781 gtaatcccct gcgcgatgcc ctgcagggaa acaaattccc ccaaatcgta accgctcagg
     9841 aagccgcgca tttcatcatc ggaaacactg gtatagacag acatatcaac tcacttgctc
     9901 aaaaacgggc aaacccgccg tcagaacgcc ggacggcagg caaacatata attcacatcg
     9961 gtcgaatcgc acagggcata agtttgcgac aacacatggt aagtcatacc cttcgtatcc
    10021 gccacatcca agcctgcctg acggcacatt cgcgccagct cggcaggtgc gatgaatttt
    10081 ttccagtcgt gcgtgccttt ggggacaaac ttcaacagat attccgccgc cacaatcaga
    10141 tgcaggtacg atttcgggtt tttattgatg gtggaaaaaa acaccatgcc gtccggcttg
    10201 accagcttgg cacaagcacg cacgatggcg gcgggatcgg ggacgtgttc catcatttcc
    10261 atgcacgtta ccacatcgaa cgagtgcggt tccgcctcgg caaggtcttc cacgcggata
    10321 cattcgtatt cgatatcggc gacattgttc aaagccgcgt gcaggcgggc ggtttccaac
    10381 gactgctccg ccatgtcgat gccctttaca aacgccgcgc cgcgccgtgc catactttcc
    10441 gccaagatgc cgccgccgca gcccacgtcc aaaacccgtt tgccgcacaa atccgcgtgc
    10501 ccgtcgatat aatccagccg cagcggattg atgtcgtgca aggttttgaa ctcgcccgac
    10561 ttgtcccacc atttgtcggc aatccggctg aatttggcga tttccccctc atcgacatta
    10621 tattttttgt cggacatttt ccctcccatc tgacgaaccg cccactccaa aacccaagat
    10681 tatactatgg aacacaatgc cgtctgaaag ccttttcggg cggcgcggcg caaatgcctt
    10741 acaaatcctt acactttacg gcataatggc ggctcgcttt ttctggcaga aagacaaaat
    10801 atgcccacca aaaccccttc actgttcggc ggcgcgatga ttatcgccgg cacggtcatc
    10861 ggcgcaggta tgctcgccaa cccgaccgcc acatccggcg tatggtttac cggctcgctg
    10921 gccgtgttgc tgtacacctg gttttctatg ctttccagcg gcctgatgat tttggaagtc
    10981 aacacccact atccccacgg cgcaagtttc gacacgatgg tcaaagacct gctcggacgc
    11041 ggctggaaca tcatcaacgg catcgccgtc gccttcgttt tatacctgct cacctacgcc
    11101 tacatcttcg ttggcggcga cctgaccgcc aaaggcttag gcagcgcctt gggcggcaat
    11161 gtttcactca ccgtcggaca actcgtcttc ttcggcatcc tcgccttttg cgtatgggca
    11221 tccgcacgct tggtcgaccg cttcaccagc gtcctcatcg gcggcatggt attaaccttt
    11281 atttgggcaa ccggcggcct gattgccgat gccaaaatgc ccgtcctgtt cgacacccaa
    11341 gcccccgtcg gcaccaacta ctggatttac gccgccaccg ccctgcccgt ctgccttgcg
    11401 tcattcggtt tccacggcaa cgtctccagc ctgctcaaat actttaaagg cgacgcgccc
    11461 aaagtggcta aatccatctg gacgggcaca ctgattgcgc tggtaattta cgtcctctgg
    11521 caaaccgcca tccaaggcaa cctgccgcgc aacgagttcg cccccgtgat tgccgccgaa
    11581 gggcaagtct ccgtcctcat cgaaaccctg tccaaattcg cccaaaccgg caatatggat
    11641 aaaatattgt ccctgttttc ctatatggcg atcgccacct cgtttttagg cgtaacctta
    11701 ggtctgttcg actacatcgc cgacatcttc aaatggaacg acagcgtgtc cggccgcacc
    11761 aaaaccgccg cgctgacctt cctgccgcct ctaatttcct gcctgctctt ccccaccggc
    11821 ttcgttaccg ccatcggcta cgtcggcctg gcggcaaccg tctggacagg catcatccct
    11881 gccatgctgc tctaccgctc gcgccaaaaa ttcggcgcag gcaaaaccta taaagtttac
    11941 ggcggcttgt ggctgatggt ttgggtcttc cttttcggca tcatcaacat cgccgcacag
    12001 gtattgagcc aaatggaact cgtccccgta tttaaaggat aaaggcaaaa tgccgtttga
    12061 agcccgccgg cggcttcaga cggcattgcc gcaacaaacg gcaaccgtat tccggcacac
    12121 agcgcattac cctgcccctc acgcacaaat cccgccccga caaaccggga cgcaaccata
    12181 aaggaacaat gatgaagctc aaaatagata ttgcaaccaa caacttcaaa cacggcggcg
    12241 gcacggaacg ctacacattg gatttggtaa agggtctgaa cagacaaaac atcacaccgg
    12301 ccgtttatgc gacgaaattt gatcacggca ttcctgaata cgccatgatc gaaccccatc
    12361 ttgtcgatca acaccggacg ctgaaaaaac tacgctcatt cctcttttca agccggctcg
    12421 ctcaaaccag aaaaaacagt gccgccaaac tgattgcctg ccaccacgcc gattacgccg
    12481 acctcctcat ctgcggcggc acacacttgg gctacctgca ccatatggcg caaaaaccga
    12541 acctgctcga ccgcctcgcc atacgccgca accgcagcaa ctacgccacc gccaaactga
    12601 ttatggcgca ttcccatatg atgcagcgcg aactggtcgg actatacggc gttccccccg
    12661 aaagaatcca agtcgccccc ccccccgcag atacggaacg cttctttcca caacctagag
    12721 aaactgccgc tctgcgcgcc aaatacggtt ttgccgacca tgaaaccgtt ttcctatttc
    12781 catcgaccgg ccacacgcgc aaaggcctgg aactgcttgc cgactttttc gaacataccg
    12841 acctgcccgt caagcttgcc gttgtcggct ccccgctccc ccgccctatg aaaaacgtcg
    12901 tcggactggg cttctgcacc gatatgcccg aactctaccg cgccgccgac tttaccatta
    12961 tggcctccct gtatgaaccc ttcgggctgg tcggtgtcga atccgtccta tgcggcacac
    13021 gcgtcgtcct ctccgaaaac atggcatgta cagaggtcat gaacgaagaa gccggattct
    13081 ttttctcacg ccaaaacccg gaaaccctag cgcaagccgt tgcccaagcc gtcagcctta
    13141 aaaaacaggg cggacaccgc ctgtccgacc cgatgcgtgc actgaactac aacccgtccc
    13201 tgtcgcacca catcgaccga ctgaccgaca tactggcatc cgtataacaa aatgccgtct
    13261 gaacgagttt tcagacggca ttgctgc
//
LOCUS       DBBZYD010000059        12454 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.059, whole genome shotgun sequence.
ACCESSION   DBBZYD010000059 DBBZYD010000000
VERSION     DBBZYD010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12454
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.059"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(499..1791)
                     /locus_tag="ACJJDL_001372"
     CDS             complement(499..1791)
                     /locus_tag="ACJJDL_001372"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HGG7574077.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIALTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            1868..2836
                     /locus_tag="ACJJDL_001373"
     CDS             1868..2836
                     /locus_tag="ACJJDL_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574078.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSETVALATPVWQKMGMHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWGGTNGGTQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRIGKIKRLDIATDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(3037..4500)
                     /locus_tag="ACJJDL_001374"
     CDS             complement(3037..4500)
                     /locus_tag="ACJJDL_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7574079.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLPLLASAAYAEETPREPDLRSRPE
                     FRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGIR
                     VILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAAA
                     LFENRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNIN
                     QAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKFN
                     DMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLSS
                     AEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRYG
                     LRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRALH
                     FKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(4742..6823)
                     /locus_tag="ACJJDL_001375"
                     /pseudo
     CDS             complement(4742..6823)
                     /locus_tag="ACJJDL_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(8306..8551)
                     /locus_tag="ACJJDL_001376"
     CDS             complement(8306..8551)
                     /locus_tag="ACJJDL_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574080.1"
                     /translation="MLKSIELNSHVRNRLAAYLKGRGMDFQTAMQEEEGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            8668..9093
                     /locus_tag="ACJJDL_001377"
     CDS             8668..9093
                     /locus_tag="ACJJDL_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HGG7574081.1"
                     /translation="MYSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYVR
                     LSDMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLILLAYQLYCGVL
                     LRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            9105..9581
                     /locus_tag="ACJJDL_001378"
     CDS             9105..9581
                     /locus_tag="ACJJDL_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HGG7574082.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GQRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGENAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(9931..10419)
                     /locus_tag="ACJJDL_001379"
     CDS             complement(9931..10419)
                     /locus_tag="ACJJDL_001379"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HGG7574083.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPEIDRTHWKEAGRTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(10495..11550)
                     /gene="aroG"
                     /locus_tag="ACJJDL_001380"
     CDS             complement(10495..11550)
                     /gene="aroG"
                     /locus_tag="ACJJDL_001380"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HGG7574084.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAEHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            12217..>12454
                     /locus_tag="ACJJDL_001381"
     CDS             12217..>12454
                     /locus_tag="ACJJDL_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574085.1"
                     /translation="MTTQMCASRDVSKSAKGWSVGIGLNVGKQLTDNVGLEFDPYYRH
                     KTICKPREIVLDGDKTKMGRSKSNEYGFRVAATFY"
BASE COUNT         2838 a         3438 c         3082 g         3096 t
ORIGIN      
        1 ttgcaaacac tgccagaacg gataaatccg gattcccgcc cacttcgtca ttcccgacgc
       61 gcacgccgct ttcccgccca cttcgtcatt cccgcgaaag cgggaatccg gtgcgttggg
      121 tttcagtcat ttccgataaa ctcctgccgc attgtatttc tagattcccg ctttcgcggg
      181 aatgacggcg gatgggtttc cgtaccgtgg tgtccggatt cccgacggta cgggaatgac
      241 ggcagtgctt ccttaactta gttttatttt aatcgactgt atggtggatt aacaaaaatc
      301 aggacaaagc gacgaagccg cagacagtac aaatagtacg aaaccgattc acttggtgct
      361 tcagcatctt agagaatcgt tctctttgag ctaaggcgag gcaacgacgt actggttttt
      421 gttaatccac tataaatgcc gtctgaaaac ctgtttgcag gttttcagac ggcattgttt
      481 tcgtcgccgg ttcaaacttc aatccgattg cgacacggta accggtatgc cgcgcaagcg
      541 cgcaagcagc gcgtccgcct tctgtttctg cgcggcaaac gccgccttgt ccgcctgcgt
      601 caattcgggt gtcggcaatg cgactgaaac aggattaacg ggctgcccgt tgatgcgcgc
      661 ctcgtaatgc aggtgcggcc cggtcgaacg cccggtcgaa ccgacaaaac cgatgacctc
      721 gccgccgcgc acattgcctt gtgcctgcga aaacgcgctc aagtgcgcgt acagcgtttc
      781 cacgccgttg gcgtggcgta tcatcaccgc gttgccgtat ccgcccttcc ggcctttaaa
      841 ggtaatcacg ccgtcggcgg aagccctgac cggcgttccc tgcggtgcgg cataatcgat
      901 gcccgtgtgc agccgccatg tgtgcaggat ggggtgcata cggtagccga acggcgaaga
      961 aatgcgcgta tagaccagcg gctcgatgtt gaagccgcct ttttcctgca acaccctgcc
     1021 gtcttcatca taataattgc cgccccctcc gccttccttg tccgaacggt aatagaatgc
     1081 ctgatgcctt gtgccgccct taacgacttc agccgccaaa atatcgcccg ccgccacctg
     1141 ctgcccgtgg aaatacaggc tgtcgtacat caggcgcacg gcatcgcctt ccttcaaacc
     1201 gtcaaggctg aagcggccgg cgaaaatccc gcttaaggat tcgcggattt cgacgggcac
     1261 ttccgcccgc gccagcgaac cgcgcgccga cgttttgacc acgaccgaac gcagcgtcgg
     1321 caaaaccttc atatccgcct cagaagccga ccgccgccat atgccgcctt tcttttccaa
     1381 agcgaccaga ttgcgctcgc cgtcttcgtc ggtaaaaaac tgtacttcgc gcgcgccgcc
     1441 gtcgccgccg accaaaacat gaaccgactg gtcggcacgc aaatgccgca aatcggcttc
     1501 gccgccatat ttttccgtga ttcgggcaat ctcgtcccgc gccatacccg aacgcgccag
     1561 cacgtccgcc agcgagtcgc ccggctgcac cgcctcctgc acccaatatg ccgtctgaac
     1621 gccgctgccg ccccaagaca gcggcggcag attttgttcc acgcgctgcg gtctgacgcg
     1681 ttccgtcctc tctgtcaaag caatgtatgc cgccgacacc aaaataatcg aaacggcaag
     1741 cgcgcgcagc gcgtatttcc gatgttttgc cgaaagtggg aagacagcca tattgttcct
     1801 ttttgacggc gtttgcgccg aatcctctat aatatccgcc cgatccgcat ttgtcagaca
     1861 tcaaacgatg aaactcaccc tcgccctccc ctcgctcaat ttggatgaag acgaaatccg
     1921 aatacctcta tgcctgcccg ccttcaacaa aatcctgcaa tacggctcgc tgcaccgcca
     1981 aagctgcacg gcttcggcat tttacgcgcg ttatttgtgg tgcggcagac tggcggaacg
     2041 cgcggcgcaa agcctgaata tgccgtctga aaccgtcgcg ctcgccacgc ccgtctggca
     2101 aaagatgggg atgcatcagg caaatgtgct gacggcggaa tatttggatg tcggtacgga
     2161 tgaagcggaa cggctctgcc gcgatctgtc ggcgttttac ggcgatattc cgtggcgttt
     2221 cgttcccgtc ctgcccgaat tatggctggt ttcccttccc cgcgcgtacc gctggggcgc
     2281 gaagcccgtt ttggacttgg gcggattgtt gggcgcggac gatcagccgg acggagaaga
     2341 tgcgttggaa tggctgcgcg tccaaaccga aatccaaatg tggctggcgg cgcaccccgt
     2401 caaccataac cgcaagaaac gcgggctgcc cgagttgaac ggcttatggc tttggggcgg
     2461 cacaaacggc ggcacgcaag gcggcacgct tttcgccgat acggtttgga gccgtttcca
     2521 ccccgaccgc cgcgcattgc ccgacaactt ccgcgcctat gaagaaacgg cggcacacct
     2581 gcccgacacg caccatatcc tgtttatgga cgatttgcgc ctgaccgccc tgacagggga
     2641 cagggagcgg tatgcggcaa tattgcagca gtgggaagaa cgctggttcg caccgcttta
     2701 cgaagccgtc cgcatcggca aaatcaaacg gctggacatc gccacggacg gacaacacgg
     2761 cggtacgctg accttcaaac ccgccgacag gtggaaattt tggcgcggcg cgaaaacctt
     2821 tgacggaatc tggtgaaccc gcccgccgca accgcgacaa tgccgtctga agcccgaatc
     2881 gggtttcaga cggcatttta cctcgcatcg ccgttatgcc ggaaaaaccg gaatgcgttt
     2941 ccgcacacgc ggcggcacgc aaagcaccgc ccgaaagccg ccgatgcccg ccgtgatacc
     3001 gccgccggca gggtttcctc cgaaaaggaa cagcaatcag aacgttttat taaactcgac
     3061 aaacgcccga tttttctcgt attcgttgaa cacatcgtta ctccgcgttt cgcggtgcga
     3121 caacgtcagg cgcggcgtga tgcctttgaa atgcaatgcc cggtgccaaa ggctcaagga
     3181 tgtgttcaat tctttatccc tgcgcctttc ccctttaaaa ccgctgaaaa agccgggttt
     3241 ttcataatgc cgtttcgccg cgccgaggcg caacagcgaa gacaggccgc tgccgcccca
     3301 ttcctgcccc caggcaaagc gcaggccgta acggttgaaa ttgtcgcccc ggtcggcggg
     3361 gttgcgctcg cggtaaaaat ccaaaccgcc catccaatat tggcgcgcat tccggtaaaa
     3421 caccagcgaa ttggaaattt gcaaatgggt attgtcggaa cgcgcccggc gcgtattctt
     3481 caaacgcccc cactccgccg aagacaacgt ttgccatttc ggggtttgcc aacggttgaa
     3541 ataaaggcgt gcgccgttgg tgtaagaata agcgtcgttg ccgtaggtgc ggcgttcgtg
     3601 gaacactgcc agcccggcat ctttgcgccg gtcggcaaaa ccgatgccgc cggaaacgcc
     3661 tgccgtcata tcgttgaatt tcttattccc cggataaacc ctgccggaca cgtcgccgcc
     3721 cgccgtcgtg taccagccgt ttttcagcga ccattttttc tccgcgccga gccggtaatt
     3781 gaccgccgtg ccgtccacct gtttcgggaa agtccatttg ccgtactgct gccgtttcgg
     3841 ggcttggttg atattgtgtt cgcgggtgac gctgaagccg ccatttacct tccacgcatc
     3901 gcgttcgcgc aatgccttgc ggtacagctc gacctgctcc atcagctgcg gcggcaggtt
     3961 ttccgccttc aggcggtcga actggtctgc cgccgcctcg ttctgcctgt tttcaaacaa
     4021 tgccgccgcc aaacgcatac ggacggcggg cgcgtcgggt tgggcggcaa tcaattcccg
     4081 gtaatgggaa atcgcctcct tcaccctacc gtctgcctgc gccaaaatcc cttgtgcata
     4141 aagtgccaac atcttatcct gctgcgcctg ttgtaggtaa atcggcaaaa taacgcggat
     4201 accggcaata ttgtttgaga ccactgcgga atacatcgcg cgggacaaca attcgggatt
     4261 tttcagcagg gtttctccgt caatctgcaa aacttttcct ttttcccgca cctgccccgg
     4321 taccttctcc ctgtcgattg gtttgacctc cgcttcatga agcctgaact cgggacggct
     4381 tctcaaatcc ggttcgcgcg gtgtttcttc ggcatatgcc gcgcttgcca ataaaggcag
     4441 cagcatccat ctgtttcgtg caggcataaa tgtcttccca caaaaataaa aaataaccat
     4501 tatcaatcgg cggattgtat cagtttttta tgccgctgtt ccaaaccctg ccgcccgatg
     4561 ccgcgacaat gccgtctgaa gccagaatcg ggtttcaaac ggcggcaaaa aaccggcggt
     4621 tttccgccgg tttcatcatg atgccccgcc cttcggggcg gcagggttcg gattggtttg
     4681 cggggcggcg cgcggggccg tgccggtgtg ccgcctgtgc gtcaaaacat ttcccgacgc
     4741 atcaaaacag ccatttgagc gacaatgcgg cttctttgtc gccgtccgtc cttttgccgt
     4801 atccgatgcg tgcggacata tggcctttcc aaccggcttc aatgccgaac cgcccttcga
     4861 gcgccgtcct gcctgccagc gtctgttttt cgccgtccat ttccacgccg aaagattttg
     4921 acctgtgcaa aacattaaaa gcggcgaaag gctgaagatt gacaccgtta cgcaaagcaa
     4981 aacgggtttt tgcccgaata ccggcgcggc tttgccactg accgctgccg agcagtccga
     5041 ccgccgtccc ctcgctgtcg gtaaagccgc cgtttacgcc caagtaggta aactgagcct
     5101 gcggttgcag gtaaaaccgc acattattgc cttttccgac aacgccttcc gccacaagcg
     5161 cgttgtagcc gccttcgaca gaagccgtcc aacctttggt tttgtagcgt tccacacggt
     5221 tttcatcatt gatgcggtgt ttgaaacgtt ggtattgcaa ccagccgtcc aaatacgcac
     5281 ccgtttgttt atcgcgcaac tgatgccacg cagcataaac acccccgcca taaccatgca
     5341 aataactgcc tgccgcaccg cctttgccgt tgactgatgc gtgctggccg gccctgccgc
     5401 ccatcacgcc gattgccagc cggctgcctt cattttgccg tacaaacacc tcgccgccga
     5461 tttgcacgcc tttgcgccgc ccgtccgcag ccgcgccgcc ccgtatattt tgatgcgacc
     5521 ggccgccgat gaagcgcagc cacaattttt gacgggacgg atcggcggca tacacgtcgt
     5581 ctcccctgtc ggcggcacgc agcccaaaca aagtatttgc cgcataagcc tgttgggcat
     5641 ataaaaccgc ttccgcctcg gggatagcca aacgctgcac gcccaagcaa aatccgcctt
     5701 cgcattgctt gagcaataat tcgtacagtc cctgccggta attttgttta aacgcaaacg
     5761 aattagggtc tgccttttcc gccgcaatca gtttgcgccc gtcgagcgtt ttcagatttt
     5821 ccggccggcg ttccaaaacc acgccggatt gtccgctgac tttgtcttca aaggtcaggg
     5881 cgggttcgtc cgactcccgc acgtcgtagc cgaacaggaa atccgcgccg ccctgatacg
     5941 ctttatggac ggtcagtttt tcatctttcg tgttcaggcg gatccgggca ttatcggaag
     6001 tttccagcat atggatgtcg gaatggcggc gcggttccca aagggaatct ttcagcgtca
     6061 tcttggtcag ttccaacacc tgtccggcga cgtgggattt gttttcgatt ttgacgtgta
     6121 attttttatt gaagatgttg ttgagactag tctgtgatgt attactatga ggagtgagta
     6181 cggaatcttc taccaattta ttaattaaat cggggttttt ctgtttgagt atactaaatt
     6241 ttggtccaag ctgttctata tacgcctcct cagtccgttt tttattttct tcccaagctt
     6301 cgggtcttgt tttgtataaa tcctgtaatt gcttcttaac cgcatccttt aaattatccc
     6361 cgtaagtatc tgtaatatat ttcttaacaa cgggcatatt atcgacggcg agtatgccgc
     6421 tattgtagtt tttaccttgg atattgattt cgtcataccc atattcggat gaattttgat
     6481 cggttttacc gctggaaaaa taatgggaag tgccgggttt cggcttgtct gaaaatgaaa
     6541 aatcggcatc gtcgccgatt ttggtagaac gagtatttga accaagctga gctctgaaca
     6601 taccgaagca atcaaaagat atgctgcacg ggccgcgcca aacgtgggaa tttctgtctt
     6661 ccgccgcttc taaaataaat ttgtttttaa tctcggcttc tttgacggga tcgtacgcat
     6721 ccgaacctca aacatatggc gtgcaaaaca gcgataaaac agataatgtt aatagattaa
     6781 cccgaccgct tgcttgcttg cttgcttgct tgcttgcttg ctttcagtgt catgagaaat
     6841 tttcctttgt caagtgttaa aattataatg attatatact acattatact acatcgcaat
     6901 gaaaaatcag gaaaagcaaa aaaccctccg ccgtcattcc cgcgaaagcg ggaatctaga
     6961 attttaatgc cgcaagaatt tatcaaggat ggtcggggtt taaaggtctg gattcccgcc
     7021 tgcgcgggaa tgacggttta gaaatcaccc gaaacaagaa aaagaaccga aaccgaacaa
     7081 gccggattcc cgcctgcgcg ggaatgacgg gatttcaggt tactgttttt gattttctgt
     7141 ttttgtggga ataacgggac tttggatgat gtgcatttat cgagaaaact aaaaaccctc
     7201 cgccgtcatt cccgcgaaag cgggaatcta gacctttcgg tgcggaaact tatcggataa
     7261 aacggttttc cctgcatcct ggattcccac tttcgtgcga atgacgggat ataggtttca
     7321 ctacggacgt gttcagatta ccgcctgcgc gggaaagacg ggatttcagg ttgctgtttt
     7381 tgattttctg tttttgtggg aataacggga ctttggatga tgtgcattta tcgggaaaac
     7441 aaaaaaccct ccgccgtcat tcccgcgaaa gcgggaatct agaattttaa tgctgcaaga
     7501 atttatcggg gatgaccgag gtttgaaggt ctggattccc gcctgcgcgg gaatgacggt
     7561 ttagaaatca cctgaaacga gaaaaagaac cgaaaccgga caagtcggat tcccgcacgg
     7621 gcgggaagga cggaatttca gattgttgtt tttgattttc tgttttgtgg gaataacggg
     7681 attttggatg atgtgcattt atcgggaaaa ctaaaaaccc tccgccgtca ttcccgtgaa
     7741 agcgggaatc tagaatttca atgccgcaag aatttatcgg ggatgtccgg ggtttaaagg
     7801 tctggattcc cgcctgcacg ggaatgacgg tttagaaatc acctgaaacg agaaaaagaa
     7861 ccgaaaccag ataagtcgga ttcccgcacg ggagggaagg acgggatttc aggttactgt
     7921 ttttgatttt ctgttttgtg ggaataacgg gattttggat gatgtgcatt ttcgggaaaa
     7981 ctaaaaaccc tccgccgtca ttcccgcgaa agcgggaatc tagaatttta atgcggcaaa
     8041 aatttatcgg aaaaaaccga agtttaaaga cctagattcc cgcctgcgcg ggaatgacgg
     8101 tttagaaatc acccgaaacg agaaaaagaa ccgaaaccga acaagccgga ttaccgcctg
     8161 cgcgggaatg acggctcaaa agttacgaaa cgaaaaataa ccgaaaccag acaagtcgga
     8221 ttcccgcgcg ggcgggaata acgataagcg taatttcaat ctgccatatt gtcttttcac
     8281 ttgcctgaaa acagatttca gccgcctatc cctgcatccg gcggctgatg tagtcggcaa
     8341 tcaaatcccg cttttcccaa aaaaatttct gcattttttg ttcggaatac agtttgcgga
     8401 ccagagtggg cagaccgctg tggacgatgg cggcgatttc tttgttgcct tcttcttcct
     8461 gcattgccgt ctgaaaatcc atgcccctgc ctttcagata tgctgcaagg cggttgcgga
     8521 catgcgaatt gagttcgata gatttgagca tttttcctcc gttttcgata acgattatat
     8581 ttaatccgtc tgtatgcctt attttatcat gtttcacgat cggtttgcct gtacaatacc
     8641 gcttttcagt atgatgtgct ggcatttatg tattcttggt tcaagctgtt tcacttgttt
     8701 tttgtcattt cgtggtttgc agggctgttt tacctgccga ggattttcgt caatatggcg
     8761 atgattgatg cgccgcgcgg caatcccgag tatgtgcgcc tgtcggatat ggcggtgcgg
     8821 ctgtaccgtt ttatgtcgcc gttgggcttc ggcgcggtcg tgttcggcgc ggcgataccg
     8881 tttgccgccg gctggtgggg cagcggctgg gtacacgtca aactgtgttt gggcttgata
     8941 ctcttggctt accagttgta ttgcggcgtg ctgctgcgcc gttttcagga ttacagcaat
     9001 gctttttcac accgctggta ccgcgtgttc aacgaaatcc ccgtgctgct gatggttgcc
     9061 gcgctgtatc tggtcgtgtt caaaccgttt tgacggagca tcttatgccg atagaaatcg
     9121 aacgccgttt tttgattgga aacgacaact ggcggcaata cgccgacgaa ccgctgctgt
     9181 tgaggcaggg ttatctgtct gttgaaaaag aacgcaccgt ccgtgtccgc attgccggac
     9241 aacgggcgtg gctgacgctg aaaggctata tttcggaaat cagccgcagt gagtttgaat
     9301 acgaaatccc gcttgccgat gcggaaaaga tgatggaaac gatgtgcccg tttaaaatgg
     9361 aaaaatggcg ttatccggtc agatggggcg gcagcctgtt tgaaatcgat gttttccttg
     9421 gcgaaaacgc gcctttggtc gtcgcggaaa tcgagttgcc cgacgagaat gccgattttg
     9481 accgtccgga ctggctgggg cgcgaaatca ctgccgacgg tatgtttacc aatgcttatt
     9541 tgagcaggca tccgttctca agctggaaaa atgccgtctg aaacggcttc agacggcatt
     9601 ctccgacaac catcgcaaat ccaaagacag cctctatatc cttatttctg ctttctttgt
     9661 tccattattc ccaataaatc cccataacct aaaatctcgt cattcccgcg caggcgggaa
     9721 tccggttctt taaacttcgg ttttttccga taaattgctt tagcttttcg tttccggatt
     9781 cccgcttttg cgggaatgac gatggaagat tgttgttatt tcggataaat taccctaact
     9841 ttaaaatccc ggattcccat cttcggggga ataacaatat tttctatttc agcccatcat
     9901 ttgcggggga ttttatagag agtttatatt tcaatatctc aaataatgca caaaagcata
     9961 gcgcgtgcct ttgctgctga cgcggcgttc cgtccgccct gcctctttcc aatgcgtccg
    10021 gtctatttcg gggaaaaacg catctccttc cacagacaaa tccacttcgg ttatccgcaa
    10081 atcggtcgcc aatggcatcg cttgtccgta tatctgcgcg ccgcccataa tgacggcttc
    10141 ttccgcgcct gcgcacaatg ccaatgccgc ctccaaactt gccgccgttt ccgcgcctgc
    10201 cgcgcaataa tccgcctgcc tgctgatgac gatgttcctc cgtccgggca ggggtttgac
    10261 gggcagggat tcccacgttt tccgccccat aatgacgggt ttgcccaagg tataggcttt
    10321 gaaaaatgcg aaatcttcgg gaatgtgcca aggcatcgca ttgcccgccc cgatgcacag
    10381 gttttccgca cacgccgcaa ttagggttat tttgagcata tttcctccac aaaaatgccg
    10441 tctgaacgct tcagacggca ttttatgaca ttatgacatt ccgtgtcaaa aatctcaacc
    10501 ggcgcgcgcc atacgttttt tgtttgcacc tgccaacaat gccaacagtt cttcagtcgc
    10561 gccccaaccg atacacgcat cggtaatgct tttgccgtac acttccggct tgtcctgcct
    10621 gccttcgacc aaatggcttt ccaccatcac gcccataata ttgccgccgt cctgttccaa
    10681 ttgggcggca atgtcttgcg ccacttccat ctgccgggtg taatccttgc ggctgttggc
    10741 gtggctgcaa tcaatcatca gcttatcggt tactcctgcc gcacgcagtt gttccgccgc
    10801 ctcactgacg tgttccgcat cataattcgg ctctttgccg ccgcgcaaaa tgacatgaca
    10861 gtcgggattg ccgccggtat ggacaatggc ggaatgtccg gccttggtta cagacaggaa
    10921 atgatgcgaa tggctcgccg caccgattgc gtcgatggca atcttcaaat tgccgtccgt
    10981 accgttttta aagccgacgg ggcaggacag cccgcttgcc aattcgcggt gaacttggct
    11041 ttcggtcgtc cgcgcgccga ttgcccccca agaaatcaag tccgcataat attgcggcgt
    11101 aatcatatcc aaaaactcgg tagaggcagg catacccata ttgttcagcg acaacaacag
    11161 gctgcgcgcc tgacgcaaac cgaaattgat atcgaacgta ccgtccaaat gcgggtcgtt
    11221 aatcaaacct ttccaaccca ccgtcgtcct cggcttctcg aaataaacgc gcatcacaat
    11281 caaaagctcg ttttcatact gcttgcggag tttcaacaaa cgctccgcat attccaacgc
    11341 cgctttcgga tcgtgaatcg aacacggccc gataataacc aacagccgct tgtccctgcc
    11401 gtgaaccaaa tcggaaattt cctgacgggt gcggtgaacc aagcccgaag cctctttgga
    11461 aatcggcagc tcgtaaagat gggcaatcgg cggcaacaac tctttaactt ctttaatctt
    11521 aatatcgtct gtggggtaat ggtgtgtcat cttgcatctt tcctgatggt tttttatacg
    11581 cggcttaggt tacatcgttt accttgcaca aacaagtgca acatattact acaaagctat
    11641 tttatttcaa aataactgat atatcttttt tcatagattt taaatttcat atttttaata
    11701 ttttaggaat tttattccaa agaaaaagaa acagattgat aaaaacaata cccgccattc
    11761 attcggacaa aaccgcacgg aacatccgtt ttcccatttc cacgacaatc cggtacagaa
    11821 caccccgctg ccgattccgc ctgcacatcc ggcaaaattt catacacaag gaaaatgttg
    11881 aaaacaaaaa gaactcattg cttgaaaaaa gatttaatgg gaatgcgggt atttcccaca
    11941 ctttttccat ttatttatcc tcattatagg aagaaaaaca tgaaaaaacc ctgcttgcac
    12001 tctcacttgc agccgtgtcc gccgttacgg tagccgatat tcccgagtct aacggcaaag
    12061 gcaaagccat catcggcgat aaggaaaaac accgttacca agcatgaaaa ccttgctttg
    12121 aaagtccatg gcgaaatccg ccaagatttg ggggacggat gatccctaac cccttgggcg
    12181 gatgcatatg cagatttgcg cggcaaaacc aaagtgatga cgacccagat gtgtgcttcc
    12241 cgcgatgtca gcaaaagcgc caaaggttgg agtgtcggta tcggtctgaa tgtaggcaaa
    12301 cagttgaccg acaacgtcgg tctcgagttt gatccatact accgtcacaa aacaatctgc
    12361 aaaccccgtg agattgtttt ggacggcgac aaaaccaaaa tgggccgctc caaatccaac
    12421 gagtacggct tccgcgtagc cgcaacgttc tata
//
LOCUS       DBBZYD010000060        12340 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.060, whole genome shotgun sequence.
ACCESSION   DBBZYD010000060 DBBZYD010000000
VERSION     DBBZYD010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.060"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..219
                     /locus_tag="ACJJDL_001382"
     CDS             <1..219
                     /locus_tag="ACJJDL_001382"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574086.1"
                     /translation="ERYWKMKEMKPVRYHIGDMPETSKQTASRHDDRAVGVDDDCFHD
                     SFGQFLFGCSAEATRTAPISVKRSCLFT"
     gene            327..1361
                     /gene="lpxK"
                     /locus_tag="ACJJDL_001383"
     CDS             327..1361
                     /gene="lpxK"
                     /locus_tag="ACJJDL_001383"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HGG7574087.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            1567..2148
                     /locus_tag="ACJJDL_001384"
     CDS             1567..2148
                     /locus_tag="ACJJDL_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HGG7574088.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            2217..2399
                     /locus_tag="ACJJDL_001385"
     CDS             2217..2399
                     /locus_tag="ACJJDL_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HGG7574089.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARPLGEEELEA"
     gene            2396..3157
                     /gene="kdsB"
                     /locus_tag="ACJJDL_001386"
     CDS             2396..3157
                     /gene="kdsB"
                     /locus_tag="ACJJDL_001386"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HGG7574090.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            3180..3497
                     /locus_tag="ACJJDL_001387"
                     /pseudo
     CDS             3180..3497
                     /locus_tag="ACJJDL_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            3599..3799
                     /locus_tag="ACJJDL_001388"
                     /pseudo
     CDS             3599..3799
                     /locus_tag="ACJJDL_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            3956..4048
                     /locus_tag="ACJJDL_001389"
     tRNA            3956..4048
                     /locus_tag="ACJJDL_001389"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3990..3992,aa:Ser,seq:gct)
     gene            4351..5136
                     /gene="trpA"
                     /locus_tag="ACJJDL_001390"
     CDS             4351..5136
                     /gene="trpA"
                     /locus_tag="ACJJDL_001390"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HGG7574091.1"
                     /translation="MSRIRQAFAALNGEKALIPYITVGDPDIGATLAIMHSMVENGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAVVGALVKELKDAVR"
     gene            5173..6045
                     /gene="accD"
                     /locus_tag="ACJJDL_001391"
     CDS             5173..6045
                     /gene="accD"
                     /locus_tag="ACJJDL_001391"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HGG7574092.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPIDPLKFKDSKKYPDRLGAA
                     RKLTGEDDALVVMKGMMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(6105..6716)
                     /locus_tag="ACJJDL_001392"
     CDS             complement(6105..6716)
                     /locus_tag="ACJJDL_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HGG7574093.1"
                     /translation="MRRTALLLLALAAGTSLATSFSQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIIPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSMKPHNK"
     gene            6825..7049
                     /locus_tag="ACJJDL_001393"
     CDS             6825..7049
                     /locus_tag="ACJJDL_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HGG7574094.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGVPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVQHK"
     gene            7050..7196
                     /locus_tag="ACJJDL_001394"
     CDS             7050..7196
                     /locus_tag="ACJJDL_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574095.1"
                     /translation="MPSEMRMSRPTALFLNIVCAACRFKNKPSGVQCRHFGRIAADLF
                     RNGC"
     gene            7412..8446
                     /gene="pyrC"
                     /locus_tag="ACJJDL_001395"
     CDS             7412..8446
                     /gene="pyrC"
                     /locus_tag="ACJJDL_001395"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HGG7574096.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDNATPALVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENTDTITLVKQSQTVPASIPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(8812..9237)
                     /gene="nusB"
                     /locus_tag="ACJJDL_001396"
     CDS             complement(8812..9237)
                     /gene="nusB"
                     /locus_tag="ACJJDL_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HGG7574097.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(9315..9791)
                     /gene="ribH"
                     /locus_tag="ACJJDL_001397"
     CDS             complement(9315..9791)
                     /gene="ribH"
                     /locus_tag="ACJJDL_001397"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HGG7574098.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            complement(9839..10162)
                     /locus_tag="ACJJDL_001398"
     CDS             complement(9839..10162)
                     /locus_tag="ACJJDL_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HGG7574099.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNQPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADITKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            10329..11048
                     /gene="rnc"
                     /locus_tag="ACJJDL_001399"
     CDS             10329..11048
                     /gene="rnc"
                     /locus_tag="ACJJDL_001399"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HGG7574100.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            11096..12019
                     /gene="era"
                     /locus_tag="ACJJDL_001400"
     CDS             11096..12019
                     /gene="era"
                     /locus_tag="ACJJDL_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HGG7574101.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELIKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
BASE COUNT         2824 a         2971 c         3605 g         2940 t
ORIGIN      
        1 gaaagatact ggaaaatgaa agagatgaaa cctgtccgtt atcatattgg cgatatgccc
       61 gagacttcaa aacaaaccgc ctcccgtcat gacgacaggg cagtgggtgt tgacgatgat
      121 tgttttcatg attcctttgg tcaatttttg tttgggtgtt cggcagaggc aacccgaacc
      181 gcgccaattt ctgtaaagcg cagttgctta tttacctgat tggttcgctt atcggtttgg
      241 tcttcgcgtt gtttataggt gggtctgtat cgggtacgca tgattaatgc cccgggctga
      301 ttttgcttcg aggatttgta tcgaatatgc cgaattgttt caaatttcat actgttatcg
      361 aacggcattg gcaaaaacct tatccggttt tgtcttttct gcttaagccg ctctccgggc
      421 tgtttgccaa aattgcggca aaacggcgga cggatttttt atcgggaaaa cggcaaagcg
      481 aaaagctgcc cgtgcctgtg gtcgtggtcg gcaatattca cgcgggtggg acggggaaaa
      541 cgccgattgt tgccgcgctg gtgtcgggtt tgcaggaaaa gggcgtcaag gtcggcatca
      601 tcagccgggg ctacgggcgc aagagcaagg cggttcatgt attgaatgct gagagccgag
      661 cggaagatgc gggcgatgag cctttgctgc tgttccgcaa aaccggtgcg ccgacggcgg
      721 tgggcagcag ccgtgcagag gcaggcaggg cgttgctggc ggcgcatccc gacatcggac
      781 tgattgtggc ggacgacggt ttgcagcatt acgccctgcg gcgagatgtg gaaatcgcgg
      841 tgtttccggc ggcggatacg gggcgcacgg atttggattt actgcccaac ggcagtttgc
      901 gcgaaccttt gttgcggctg gattcggtgg atgcggtcgt cgtcagcggc ggcaaggcgg
      961 atgcgctgtt taggccgtct gaaaatatgt ttcacagccg tatcgaagcg ggacggattt
     1021 accgtttgaa caatccgtcc gaaatactgg acacaggccg tctgaaaaat caaaccgtcg
     1081 tcgccgtggc aggtattgcc aagccggcgc gttttttcga ttcgttgcgg aatatgggca
     1141 ttaccgtgaa gcgaaccgtc gcgctgcccg accacgccga catttcggcg gcagatttgc
     1201 ccgatgcgga cgcggtcatt attacggaga aagatgcggt caaattttca gacggcattt
     1261 gcaccgataa tgtttgggtg ttgcccgttt gtgcgataat cgaacctgat ttggcggcgt
     1321 ttgtgttgga gcggttggaa gatgtaccga aggccgtctg aaagcacggt ttgggcggag
     1381 tgattacgga tttgaataag aacgcctcgc gccgtcattc ccgcgcaggc gggaatctaa
     1441 gtctcgaatt ttcaggaatg cctaggaggc ttcagaaatc ccaaatctcc ggatttccac
     1501 ttggacagga atgagaaaat cggtcgtatt ttttatctgc attaatcatt cgttaaagta
     1561 ttgaatatta aactgaaaac cttgttattg cccttcgcca cgctggcatt gtgcaccaac
     1621 gcttttgccg ccccgcctag cgacgcgtcg ttggcgcgtt ggctggatac gcagaatttt
     1681 gaccgggata tagaaaaaaa tatgattgag ggctttaatg ccggatttaa accgtatgcg
     1741 gacaaagccc ttgccgaaat gccggaagcg aaaaaagatc aggcggcaga agcctttaac
     1801 cgttatcgtg agaatgtttt gaaagatttg attacgcccg aagtgaaaca ggctgtccgt
     1861 aatactttat tgaagaatgc ccgtgagata tacacgcaag aagaaattga cggcatgatt
     1921 gccttttacg gttcgcctgt cggtcagtcc gtcgttgcca aaaatccgcg cttaatcaag
     1981 aaatcgatga gtgaaatagc agtatcttgg actgcattgt cagggaaaat cgcgcgacat
     2041 catctgcccg cgtttacgga agagttgcgg cgcatcatct gcggcggtaa aaatcccgat
     2101 gcgggctgta aacaagccgg acaggttggg aaaaggcatc agaaataaat gatagccgtc
     2161 tgaaatattg aagagggcat ccgattgatt gaaccatcaa acccgaaagc aaccctatgg
     2221 aaaaaaaatt cttagacatc ctcgtctgcc ccgttaccaa aggcaggctg gaatatcatc
     2281 aggacaaaca ggaattgtgg agccgtcagg cgaagcttgc ctatccgatt aaagacggca
     2341 ttccctatat gctggaaaac gaagcgcgtc cgttgggcga agaggaactc gaagcatgac
     2401 cgaattcgtc gtattgattc cggcgcggct ggattcgtcg cgcctgcccg gaaaagcctt
     2461 ggcggacatc cacggcaaac cgatggtcgt gcgcgttgcc gaacaggcgg caaaaagtaa
     2521 agctgtgcgc gtcgtcgttg ccaccgacca tcccgatatt cagacggcct gtcaggcgca
     2581 cggcgtcgaa gtcgtcatga cttcaaaccg gcacgaaagc ggcacgacgc gccttgccga
     2641 agcctctgcc gcgctgaagc tgccgccgca tctggtggtt gtcaacgtac agggcgacga
     2701 gccgctgatt gcacctgaac tcatcgaccg caccgccgaa gtactcgtcg aaaacaacgt
     2761 ccaaatggcg accgccgccc acgaattgca cgatttcgac gaattgatga atcccaatgc
     2821 cgtcaaagtt gtcctcgaca aaaaccgcaa cgccatctac ttcagccgcg ccccgattcc
     2881 ctatccgcgc gatgcgatgc gtgcaggaaa acgcgaaatg ccgtttgaaa ccgccgtcct
     2941 gcgccatatc ggcatctacg cctaccgcgt cggcttcctg caacgctaca ccgaaatgag
     3001 cgtttcgccg ctggaaacca ttgaatcgct ggagcaactg cgtgtcctgt ggcacggcta
     3061 cccgattgcc gtcgaaaccg ccaaagaagc tcctgccgcc ggcgtagata cgcaggagga
     3121 tttggacagg attcgcgctg tatttcagac tatataaaat agattcaaag ggaaaagata
     3181 tgcagcaaca tattgaaaaa tggcaacact tgagccggga agaacagaaa atccttgctg
     3241 aagtatgggg tctcgtgcaa aacgacgatc aggaggttca ctatgaaatg ctcaaattga
     3301 acgcacccga cgaagccagt ggcgaatttt ggttcagaat ggcagaaaca ctcagcaccc
     3361 tgccgcccaa ccgttccctc gaccttagaa tgaacggcgg caggctggcg accgccgtat
     3421 ccatcctttc cgtcatgatt gaagacaatc ccgacatacc gcagctttgg gcgcaaaaaa
     3481 ttaccgcgct caattatagt ggattaaatt taaaccagta cggcgttgcc tcgccttgtc
     3541 gtactatctg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
     3601 tttggcacac ggacacaaag cccgtgccga cggtttggca caacagcccg acaaagcggc
     3661 agaagccaac gaggaggaat acctgaccaa agccctgtcg caaaacctac tgtcaacatt
     3721 ggatgccgcg cttgcacgtt ttcctgaaga cgcgtggttt caggaaatca aacaggatgc
     3781 acaaaagcat tttgcttgag gatgtggcag tcaggaatat ttccattcag gaagaaaaga
     3841 agtgcctgat tgggtataat cagggtaaat cttattttat ttcaaaagat taatatttgc
     3901 tttctgtttt tccttgacgg tatcggaaaa gttgattata gttacagctt ccttaggagt
     3961 aatggctgag aggctgaagg cacttccctg ctaaggaagc atgtggggtc aacctgcatc
     4021 gagggttcga atccctctta ctccgccaag atgagaagac gctgtgtttt acagcgtctt
     4081 tttttacgcg ctttgttgcg gaagtgccga gggctgtctg ccgtgcgccg cctggatttg
     4141 caatgtgccc gcccgtgcaa aatccgattt gaccaacctg aagggcaggt ttcggaagag
     4201 cggggaattt tgataaacaa aaaactgcac ggcataatct ttcccggttt tcattttccg
     4261 tattcgccta tccgtaccgc aaatgctata ctgggaaaaa tttaccgatt gtgttttacg
     4321 gcatatttgc cgataggatg gaagagacaa atgagcagaa tccggcaggc ttttgccgct
     4381 ttaaacggtg aaaaggcatt gattccttat attacggttg gagacccgga cattggggcg
     4441 actttggcaa taatgcacag tatggtggaa aacggtgcgg atattttgga gttgggcgtg
     4501 ccgttttccg atccgatggc ggatggaccg gttattcagc gtgcggcgga gcgggcgttg
     4561 gcaaacggga tttcgctgcg cgatgtcttg gatgtcgtca gaaaattccg tgaaaccgac
     4621 acgcaaacgc cggttgtttt gatgggatat ttgaaccctg tacataagat gggttatcgg
     4681 gagtttgctc aggaagccgc aatggcgggt gtggacggcg tgttgacggt ggattcccct
     4741 gtcgaaacca tcgatccgct ctatcgcgag ctgaaggata acggggtcga ctgtattttc
     4801 ctgattgcgc cgacgacgac ggaagaccgt attaaaacca ttgccgagct ggcaggcgga
     4861 tttgtctatt atgtttcgct caagggcgta acgggcgcgg caagtttgga tacggatgag
     4921 gtttcgcgta aaatagagta tttgcatcag tatatcgata ttcccatcgg tgtcggtttc
     4981 ggcatcagca atgcggaaag cgcgcgcaaa atcggccggg ttgccgacgc ggtcattgtc
     5041 ggcagccgga ttgtgaaaga gattgaaaac aatgcgggca acgaggctgc ggtcgtcggt
     5101 gctttggtca aagagttgaa ggatgccgtg cgctgattct gtcacgcatt ctaaatattt
     5161 taggagttgt ccatgagctg gttagataaa atcctgccac ccaaaatcaa aaaccgcagc
     5221 aaagacggtt cttccaatgt tcccgagggt ttgtggcaca aatgtccgtc ttgttcggca
     5281 accgtttatt cgaccgagtt gcagcagaac aatcaggttt gtccgaaatg caaccaccac
     5341 aatccgttgt cggcacgaca acgcctgaac ctgcttttgg atgaggatgg cagggaggaa
     5401 gttgccggaa atgtcaaacc gatagatcct ttgaagttta aagacagtaa aaaatatccc
     5461 gaccgtttgg gggcggcacg caagctgacc ggggaagatg acgcgctggt ggtgatgaag
     5521 gggatgatga acggcctgcc cgtcgtcgtt gctgcgtttg aattccgctt tatcggcggt
     5581 tcgatgggtt cggttgtggg agagcgtttc gtacagggcg tccgccgtgc ggttgccgac
     5641 aattgtccgt tcgtctgtgt ggcggcttcc ggcggtgcgc gtatgcagga gggtgtgaac
     5701 tcgttgatgc agatgacgaa aaccagtgcc gcgctgcatt tgctgacgga aaaacgcctg
     5761 ccgtttatat cggtattgac cgatccgact atgggcggcg tatccgccag cttcgcattt
     5821 ttgggtgatg ttgtgcttgc cgaaccgaac gcgctgatcg gttttgccgg tccgcgcgtg
     5881 attgagcaga cggtgcgcga aacgctgccg gaaggcttcc aacgcgccga gttcctgctg
     5941 gaaaaaggcg caatcgacca gattgtcgac cgccgcgata tgaagcggcg catcagtgat
     6001 ttgattacgc tgttgtgccg tcaggacaaa gtttccgccg cttgatggct gatgaatcga
     6061 ataccgtctg aaaccgatgt ttcagacggt atttttgtgt ctggttattt gttgtgcggc
     6121 ttcatcgacg gggcatagcg tccggcacgt tctttcaggc gttgtaccaa acctttcgtg
     6181 tcggcgggta caccgccctc gcagaatgcc tgatacagga cggtgcgcag tgcgtcgttg
     6241 cggcttaatg taccgcctat cggtttccat tcggcgtttc ggggctgtat ccagcggcgg
     6301 ttgaccgtgt cgccgtagcc gaacacttta taggaggaag gtttgccgtt gccgaacctg
     6361 atggagaagc gggcgcagaa tatgccttcg gcagtcaggt tgtcgtagcc tttgtcggag
     6421 cggatattga gaatgtagcg gatgctgccg tcgggcgcgg gtataatttg caggctgtcg
     6481 agcaggattt tcggctgttt gccgtaattt tcatccacat aaatgtcaaa ccagccgtcc
     6541 gagtgcgtat cgggcagcgg cggcagtttg gcggtatgtt ctttaaattc gcgggcggcg
     6601 gcttcttcgg gcgtttcgcg gtagcgggtg ttgatcggcg tgtctttttg gctgaagctg
     6661 gtggcaaggg acgtgccggc ggcgagtgcg agcagcagga gggcggtgcg gcgcataagt
     6721 ttctccaaat tgaaaacggc gttattttat gggttggcaa agggggctgc aagcaactgg
     6781 ggtataatct ccccccgatt cccatttttt aaacggtaca aacgatgaac agcgaaactt
     6841 tagacgtaac cggattgaaa tgtcccctgc cgattttgcg ggcgaaaaag gctttggcgc
     6901 aaatgcagca gggcgacgtg ttgaccgttc tggcaaccga cggcggcgta ccgggggatt
     6961 ttgaggcttt ttgccgccaa accggtcatg tgctgttgga tgcttccgaa caggacggcg
     7021 tgttcacgct ggtcgtccaa cacaaataaa tgccgtctga aatgcggatg tcccgcccga
     7081 cggcgttgtt tttgaatatc gtatgtgccg cgtgccgttt caaaaacaaa ccgtccggcg
     7141 tgcagtgtcg gcatttcggg cgtatcgccg ccgatttgtt ccggaatggc tgttaaccgc
     7201 cttgccgtcg gcaaagaagc aaaacccaag cacaatcaaa atctaaaggc tgtgtttgaa
     7261 gattccgttg atgcaaccca atcagtcgga caaaatgcct ttcatccaat ggaaccggtt
     7321 tccgaccgga cggaataacc ggctttcccc cggcaaacgg atggaatcga ccgggtattc
     7381 aaacgcagcc aaaacctaaa aaggaacaac catgcaaacc ctgaccatta tccgccccga
     7441 cgatatgcac ctgcacctgc gcgacggcga cgcgctcaaa gccgttgctc cttataccgc
     7501 ccgccaaatg gggcgcgccg tcatcatgcc caacctcaaa ccgcccgtcg tcagcgtagc
     7561 cgatgcgctt gcctacaaag cgcgtattat ggcggcgttg cccgaaggca gcgcgtttga
     7621 gccgctgatg acgctttatt tgaccgacaa cgccacgcct gcacttgtgc gcgaagccaa
     7681 agccgccggc atcgtcgcct tcaaactcta ccctgccggc gcgaccacca attccgattc
     7741 cggcgtaacc gacctgttca agctcatccc cgtgttggaa gaaatggcga aacagggcat
     7801 tttgttcctc gttcacggcg aagtaaccga ccccgaaatc gacatcttcg accgcgaagc
     7861 cgcctttatc gggcgcgtga tgaaacccgt tttggcgcaa gtgccgaatc ttaaagtcgt
     7921 gttcgaacac atcaccaccg ccgaagccgc ccgcctggtt ttggaagcag gcgacaacgt
     7981 agccgccacc gttaccccgc aacacctcct gctcaaccgc aacgacctct tggtcggcgg
     8041 cgtgcgcccc catcatttct gcctgcccgt actcaaacgc gaaacccacc gtcaggcatt
     8101 ggttgccgcc gttaccggcg agaaggcgca taaattcttc ctcggcaccg actccgcgcc
     8161 gcacgccaaa tccgccaaag aaaacgcctg cggttgcgcc ggtatgttca gcgcgatgac
     8221 cgccatcgag ctttatgccg aagtgtttga aaaagcaggc gcgttggaca aactcgaagc
     8281 cttcgcctcg aaaaacggcg caaggtttta cggcattcct gaaaataccg acacgatcac
     8341 cctcgtcaaa caaagccaaa ccgtccccgc aagtattccc tacggcgacg gcgaacttgt
     8401 cccgatgcgc gcgggcggcg aaatcggctg gacggtacag tattgatggg gctggaaaca
     8461 aaatgccgtc tgaaaggttt ttcagacggc atttgtgttg ttgactgatt gatacgtcaa
     8521 cggcgtttga gtttgttacg tttcggttat ttccgataaa ttcccacaat tttcaaattt
     8581 cgccattccc acgaaggcag gaatccggaa attcgatgcg accagagttt atcaaaaacg
     8641 gcagcaactc aaaaaaccgg attcccgcct gcgcgggaat gacgagattg aagtttcaga
     8701 atttatttga aatacccaaa attcaaaaaa ccaaattccc acctgcgtgg gaatgacgaa
     8761 acaaagaaag cagaaataag gacatagaac tttctttaaa tttgtgatgc atcaacggcg
     8821 tttgggctcg tcgggacgga tttgggcggc gagtttgtcg aggatgccgt tgacgaattt
     8881 gtgcccgtcc gtgccgccga aggttttggt tacttcgatg gcttcgttga tgatgacggg
     8941 gtagggcgtt tcgggcatgg cggacagctc gtggcaggcg gtcagcagga cggcgcgttc
     9001 gatggggttg aggtcttttt cgtcgcggtc gagcaggggg cggatttgtc ggatgtactc
     9061 tgccgcattg gtttgcgtgc cgaagaaaag tttgttgaac aattcttcgt ctgccttggc
     9121 aaagtcgggc atttcgcgga tgtttttagc aatctcgggc gcggcggtgc ggttgataag
     9181 ggattggtaa acggcttgta cggcaagctc gcgggaacgg cggcgggctg ttttcatgat
     9241 ttttccttga aacggttggg cggcacggta tgccgtctga aacggaaagg gcgtatcggt
     9301 gtacgccctg tttgttattc ttcgtcttca aactgttctt cgagcaggag gttgacgagg
     9361 ttggcgcatt ctacggcgac tttggcggca tccgaggctt tttcttcaat ccgttcgatt
     9421 gcctgtgcgt cgttttccgt ggtcaggacg gcattggcaa tcgggatgtt gtagtcgagt
     9481 gcgacgcggc tgacccctgc tccggattcg ttggaaacca gctcgaaatg gtaggtttcg
     9541 ccacggataa cgacgccgat ggcaatcagt gcgtcaaatt tttcagaaga ggcaaagttc
     9601 atcagcgcga tggggatttc aagcgcgccg ggtacggtgg cgacggtaat gttttcgtct
     9661 gccacgccca attcttggag ggtgcggcag cagactttga gcatttcgct gccgatttcg
     9721 ttggtgaagc gtgcctgtac gatgccgatg cggaggtgtt tgccgtcgag gttgggggcg
     9781 atggtgttca ttgggtgtcc tttggtattc ggaggtttcg gaatgccgtc tgaaggtttt
     9841 agtcttgcgg ctgccagtcg gcgacggttt ggaatgtgcc gtcttctgcc aattcccacg
     9901 cgctgccttc aggttgggag agcagtgcgg cggtttcagg gttggttttg gtgatatcgg
     9961 cgaggctgac gatgctgaag ttgtccgggt cgtcggtgta ttcgtcggtc tcgtcgccgc
    10021 tgaagaaacg ccagccgctg tcgttttcaa aaacgggggc ttcgcggtag aggaagccga
    10081 cgggctggtt ttgtttggcg acggtgttgg tggcgatgca gcggtcgagt gccgaggaaa
    10141 gtgcttgtgc aaatgcgttc attgcgggaa tacgttgggg gaaaacttgc ggattttacc
    10201 acgattcttg cgttgtcggc agacggcggc ggtttggtgg tacaatgtgc gccgtttgca
    10261 gccttaaggt gtttctgtat ttttggagta tggaaacgca ttcgggctgt tttttgcgga
    10321 agacggtaat gaaagacgat gttttgaaac agcaggcaca cgcggcgata cagaagagac
    10381 tgggctacgc gttccgcgat atttcgcttt tgcggcaggc tttgacgcac aggagccatc
    10441 atgcgaagca caacgagcgg ttcgagtttg tcggtgattc gattttgaat tatacggtgg
    10501 cgcggatgct gtttgacacg tttccgaagt tgaccgaggg cgagttgtcg cggttgcggg
    10561 caagtctggt caatgagggc gtgctggcgg aaatggcggc ggaaatgaat gtcggcgacg
    10621 gtctgtactt gggggcgggc gagttgaaga gcggcggctt cagacggcct tcgatactgg
    10681 cagacgcgat ggaggcgatg tttgcggcgg tcagcttcga tgccgatttc aacacggcgg
    10741 aaaaggtggt gcgccatttg tttgccgacc gcgtccggtg tgccgatttc caaaatcagg
    10801 caaaagacgg caaaactgct ttgcaggagg cgttgcaggc acgccgcttt gctttgccga
    10861 aataccgtat cgaagagcaa atcggccatg ccaacgacag tatgtttgtg gtttcctgcg
    10921 atttgggcga actgggtttc gtgtgccgtg ccaaagggac gagccgcaag gcggcggaac
    10981 aggaggcggc gaaagaggct ttgaaatggc tggaagagaa gctgccgctg aagaagaaaa
    11041 agaaatgagg cggcgcgtga atatgccgtc tgaacatatg gatacgaaag caaatatgga
    11101 tattgaaacc ttccttgcag gggaacgcgc cgccggcgga taccgttgcg gcttcgtggc
    11161 gattgtcggc cgtccgaacg tgggcaaatc aacgctgatg aaccatctca tcggtcagaa
    11221 gatcagcatc accagcaaaa aggcgcagac gacgcgcaac cgcgtaacgg ggatttatac
    11281 cgacgatacc gcgcagttcg tgtttgtcga tacgcccggc tttcaaaccg accaccgcaa
    11341 cgcgctcaac gacaggctga atcaaaatgt taccgaggcg ctcggcggcg tggatgtggt
    11401 ggttttcgtc gtggaggcga tgcgctttac cgatgccgac cgcgtcgtgt tgaaacaact
    11461 gcccaagcac acgccggtca ttttagtggt caacaaaatc gacaaggaca aggcgaaaga
    11521 ccgttacgcg ctggaggcgt ttgttgccca agtgcgcgcc gaatttgaat ttgcggcggc
    11581 ggaggcggtc agcgcgaaac acggattgcg gattgccaac ctgttggagc tgattaagcc
    11641 gtatctgccc gaaagcgtgc cgatgtatcc cgaagatatg gttacggaca aatcggcgcg
    11701 ttttttagcg atggaaatcg tgcgtgaaaa actcttccgc tatttgggcg aggaattgcc
    11761 ttatgcgatg aatgtcgaag tggagcagtt tgaagaggaa gacggtttga accgcatcta
    11821 catcgccgtt ttggtcgata aggaaagcca aaaggcgatt ttaatcggca aaggcgggga
    11881 gcgtttgaag aagatttcca ccgaagcgcg gttggatatg gaaaaactgt ttgataccaa
    11941 agtatttttg aaggtttggg tcaaagtcaa atccggttgg gcggacgaca tccgcttcct
    12001 gcgcgagctg ggtttgtagt ttttcttgct gaactttacg caaatgccgt ccgaacaggt
    12061 ttcagacggc attttgtttc aatcgggaat atctttgtta aaaacgggtt gatattatct
    12121 gtgcatatta tagtggatta acaaaaacca gtacggcgtt ggctcgcctt agctcaaaga
    12181 gaacgattct ctaaggtgct gaagcaccaa gtgaatcgat tccgtactat ctgtactgtc
    12241 tgcggctttg ccgccttgtc ctgatttttg ttaatccact ataaagaccg tcgggcatct
    12301 gcagccgtca ttcccgcgca ggcgggaatc tagtccgttc
//
LOCUS       DBBZYD010000061        12285 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.061, whole genome shotgun sequence.
ACCESSION   DBBZYD010000061 DBBZYD010000000
VERSION     DBBZYD010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12285
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.061"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(791..1852)
                     /locus_tag="ACJJDL_001401"
     CDS             complement(791..1852)
                     /locus_tag="ACJJDL_001401"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7574102.1"
                     /translation="MKIKALMIAAALLAAADVHAAPQKAKTASAKAAKAAKAAKAAKV
                     AKVAKVAKVAKVAATAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKA
                     NLPKDAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAQNPALKNLSP
                     AQRRELADNIIAEKVRQQAVMQNSRVGEAEVDRFIEQAQKQGITLPEGAPLRQYRAQH
                     ILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVM
                     VPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAE
                     QATVNLLRDLHSGAYVDIR"
     gene            complement(1957..4365)
                     /locus_tag="ACJJDL_001402"
     CDS             complement(1957..4365)
                     /locus_tag="ACJJDL_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HGG7574103.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLYATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            4435..5439
                     /gene="amgK"
                     /locus_tag="ACJJDL_001403"
     CDS             4435..5439
                     /gene="amgK"
                     /locus_tag="ACJJDL_001403"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HGG7574104.1"
                     /translation="MQRQIKLKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGGS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            complement(5496..6194)
                     /locus_tag="ACJJDL_001404"
     CDS             complement(5496..6194)
                     /locus_tag="ACJJDL_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7574105.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMHTID
                     LLADKVREEQKAAQ"
     gene            6221..6412
                     /locus_tag="ACJJDL_001405"
     CDS             6221..6412
                     /locus_tag="ACJJDL_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574106.1"
                     /translation="MLEINRNPAILLHFRVLIQFAAGKGSFRFGKPLQTASNPMPSEA
                     VSVVQYAPLPQTGTTVEEQ"
     gene            6412..7950
                     /gene="murJ"
                     /locus_tag="ACJJDL_001406"
     CDS             6412..7950
                     /gene="murJ"
                     /locus_tag="ACJJDL_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HGG7574107.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFGIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LSFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLYAAQIWLPFDWAHAGGMQKAARLFILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            8083..9039
                     /locus_tag="ACJJDL_001407"
     CDS             8083..9039
                     /locus_tag="ACJJDL_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HGG7574108.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRSRGWHGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGEQGENALPQAAA
                     VISAPVDAEAAGNRFDSGITRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHVGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            9090..9872
                     /gene="trpC"
                     /locus_tag="ACJJDL_001408"
     CDS             9090..9872
                     /gene="trpC"
                     /locus_tag="ACJJDL_001408"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HGG7574109.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVPLEHIRALAAEAAPVRSFIGS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEREQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIEAEVGKLF"
     gene            9937..12237
                     /gene="recQ"
                     /locus_tag="ACJJDL_001409"
     CDS             9937..12237
                     /gene="recQ"
                     /locus_tag="ACJJDL_001409"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HGG7574110.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMCEGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSGTSADGAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGI
                     LAERYPNVPRIALTATADAATRADIKHYLHLDNAPEFVSSFDRPNIYYQVIEKNNGKK
                     QLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEVIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNTAGFSRDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKRKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPKGLAELA
                     AVYGVGEEKTARYGAAVLAVLGQNAV"
BASE COUNT         2463 a         3449 c         3541 g         2832 t
ORIGIN      
        1 aacttctgaa tcgtcattcc cacgcagatg ggaatctagg tttatccgca cagaaactga
       61 tatgccgtca ttcccgcgaa agcgggaatc cagattcttc ggtacagaaa cttatcggat
      121 aaaacggttt ctttagattc tacgtcctag attcccgcct gcgcgggaat gacggcatag
      181 gggtttccgt tttcccgata aattaccaca acccaaaatc ccgtcattcc cgtaaaagcg
      241 ggaatccggc tcgttcggtt tcagtttttt aggtttcagg caacttctga atcgtcattc
      301 ccacacaggt gggaatctag gtctgtccgc acgggaactt atgcgccgtc attcccgcga
      361 aagcgggaat ccagaccgtt cggcttcagt tttttgattt cgggcaactt ctgaatcgtc
      421 attcccacgc atgtgggaat ctaggtctgt ccgcacggga acttatgcgc cgtcattccc
      481 gtaaaagcgg gaatccagac cgttcggctt cagttttttg gtttcgggca acttctgaat
      541 cgtcattccc acgcatgtgg gaatctaggt ctgtccgcac gggaacttat gcgccgtcat
      601 tcccgcgaaa gcgggaatcc agattcttcg gtacagaaac ttatcggata aaacggtttc
      661 tttagattct acgtcctaga ttcccgccta cgcgggaatg atgaatgacg gtgtaaaagt
      721 aactcgaaat ccaaaaagcc ataccgcccg gatttttgcc gatcggtatg gctttttgct
      781 tcaaaccgcc ttagcggatg tcgacatacg cgccggaatg caggtcacgc aacaggttga
      841 cggttgcctg ttcggctttt tgttggaaga tgtattgccg cacggaattg cggatacgtt
      901 cctgaggtgt gccggcatcg cgcacttcgt tcaatttgat gatatgccag ccgaattggg
      961 tgcggacggg cgcgccgacc tgtccgggtt tgagcgcgtg gacggcttct tcaaaggcgg
     1021 gaaccatcac gccgtcggca aaccagccca aatctccgcc gttgcccgcg ctcgcgtctt
     1081 gcgaatattg gcgcgctagg ctggaaaagt ctgtgccgct gcgggcctct ccgtagattt
     1141 tgcggatggt gctttccgcg ccgacggcgg cgttttcgct gtcggcctta atcaggatgt
     1201 gttgggcgcg gtattggcgc aacggtgcgc cttcgggcag ggtgatgcct tgtttttgcg
     1261 cctgctcgat aaagcggtcg acctctgcct cgccgacccg gctgttttgc atcactgcct
     1321 gctggcggac tttttcggca atgatgttgt cggcaagctc gcggcgttgg gcggggctga
     1381 ggtttttgag ggcgggattt tgtgcgacga cggcatcgat ttccgcttcg cttgcctgaa
     1441 tgttgcggcg tttgcccgcc tgtacgatca gggattggtt gacaagctgc atcagcacct
     1501 gtcgggacag ctcggattcg cttatctgcg cgtctttggg caggttggct ttggcttcgg
     1561 caacggcttc ggcaagccgg cggcgcgtga tgacttcgtt gtcggcaacg gcggcaatgc
     1621 cgtctgaaaa gcggataccg ccctgctgtt gtgcgggtgc ggcttctttt tgcgccgtgg
     1681 cggcaacttt ggcaactttg gcaactttgg caactttggc aactttggca gctttggcag
     1741 ctttggcagc tttggcagct ttggcggatg cggtttttgc cttttgcggt gcggcgtgga
     1801 catcggctgc tgccagcaat gcggcggcaa tcatcagggc tttgattttc atcattcttt
     1861 ccttatcgtt tgaatcctgc ctttgatggc gggtttgggg ttgtcggtgg aatgccgtct
     1921 tgtgcgggaa cggtgctcct gccgggtttc cgacggtcag ggccgtttgt tgcgtccggc
     1981 ggaaagagag tgggcgggga tgtagccggg aacggcgaca tccatcctgt ctgcggggtt
     2041 tctgccgaca ctgctgaggt ctttcaactg aagtgagaaa aagacagcgt ttttgtaggt
     2101 gttttcgccg gtaacgtagc gttgggcgta cacgcccgcg ccccagcagc cgcaactgct
     2161 tttgtattcc gcacccgcca gcacctctat cggttttttg gcttcaaaac cgtagttgta
     2221 acggacgacg gccgacaggt tgcgcgtcag cggccattgt gcggacaggt cgagctggct
     2281 gagtttgtcg taaaaatagg aaccgtcgga cttcaggtag attttttcgt tgcgcccgta
     2341 tttgtagcgg gcgttcagca ctttgccctg tgcgggacgg tagcttgcac cgacggcgta
     2401 gttctcggcg cgtttgtcgt tttggttgta gtggatgctg ctgtcgagga tgaagcggct
     2461 gccgatgctg ccggaggcaa atgccaccca gtcggaacgg ttgcgcggtt ttttgccgac
     2521 gctgccgtca agcatcaccg catcatcctt gaaatagaat ttctgaccga tgccggcgcg
     2581 gaaacgctct tcccccgtcg cgccgtccaa aatacggctt tgcacggcgg cggaaaggct
     2641 gtttgcggtg ttaatcctgt cgttgccgta atagaggttt tcgcgaaaga gctgcccgta
     2701 gccgaagctg ctttccgacg aatcgaaatt gggcaggtcg ttttgggatt tggcaggaat
     2761 atagttgtag aacaggcgcg gctcgagggt ttgcaggact ccgccgccga acatccgcgt
     2821 attccgctca aaagttgcgc cgctgtcgat gttgacaatg ggcagagtgc ggctgacgcg
     2881 tcgggcttct tggctgccga agcggttgag gctgtaatag gtggcgtaca gtccgagttt
     2941 gggacggacg taaccccagc tgttgctgaa atcccatttg atgtcgggat agacgacgag
     3001 gcggctgccg tcttggcggc tgtcgtggct gaagcgggta aattgtgcgg acacgccgat
     3061 ttgcgccctg ccggtgtttt tgcgccaatc ggcggaaagg cgcggcatca gggcatacgg
     3121 tttgtctttg tagccgcttt ggtttgccag cgtctggtat ttcagaaccg aaaggccggc
     3181 attcaggctg ccgcccgccg ccctgccgcc ataatccagc catacacggc ggttgaggtt
     3241 gacgttgccg gcgatttctt tgttgccgta aaagtcgcgg tagtagccgc tgtcggagac
     3301 ttggttgaaa tcgacacccg cctgaagcgt gtcggaaatg tcgtgccggt gctgccattt
     3361 cgcctgatag cggttattcc tgccgctttt tttgtcgtgc ggcagccagg tcaggtcgga
     3421 ctggccggca taatccggcc gcaggtagcg tacctgcccg tcaaagaccg cgccgcgttc
     3481 gccgatcacg ccgggcgcga acgtggcatc gagattgggg gcaaggttga aataataggg
     3541 aacggaaagg gaaacgccgt ccgaaccggc ggacagtgag ggaacaagca ggccgctttt
     3601 gcggttgccg tcaagcggga agtccgccca aggcgtatag aaaaggggaa cgccgccgaa
     3661 cacgaaggcg gcgtgtttgg caacgcctat gcctttttcc cgatcggctt cgacggaagc
     3721 ggccttgaca taccagccgg catcgccggc ggaacaggtg ttgaattggg tttccgtcag
     3781 tttgtaatgc ccttcgccca acatttcggc ggtgcggctg acgctttgca gccgccgtcc
     3841 gccttgttcg gtttccatac ggacgttgtg cgcttccccg gtctgctgct cgagattgta
     3901 ggtcagggtt tcgccccgaa tcagcgtacc gtcctgttgg agggcgaacc ggtcgcctgc
     3961 ggtaacggtg tcgcccgact ggtcgtaatc cgcccaatcg gtattgaggg tcgtccggtt
     4021 gcgttcgacg acgacgttgc cttcggcacg cacctgcacc tgcgactgtc cttccacctt
     4081 gtcggcaaca atgcgcgtat agtcttcggg gatggatgct tcgccgctgc ctcggacggc
     4141 ggcttcggtt ctctcggggc tgccgctttc gttactgcaa aacaggcagg tcgaaccgag
     4201 gctcaggctg gtaggctgta tgggttcgga cacgctccga acgcttcctc cggcggtcgg
     4261 attgtccgtt tcctccgccg caacggcatc ggcggcggcg caatgcgtgc cgaagcagag
     4321 gcccaatgcc agcaccagtg gtttgagtga aaataaacga gccaaaatcg cccctcaagt
     4381 cggtttgcca gttagaatag cgtttattgt aacctgaaat gctttagtac tgttatgcaa
     4441 cgacaaatca aactgaaaaa ttggcttcag accgtttatc ccgaacggga cttcgatctg
     4501 acttttgcgg cggcggatgc tgatttccgc cgctatttcc gtgcaacgtt ttcagacggc
     4561 ggcagcgtcg tctgtatgga tgcgccgccc gacaagatga gtgtcgcgcc ttatttgaag
     4621 gtgcagaaac tgtttgatat ggtcaatgtg ccgcaggtat tgcacgcgga cacggatttg
     4681 gggtttgtgg tattgaacga cttgggcaat acgacgtttt tgaccgcgat gcttcaggaa
     4741 cagggcgaaa cggcgcacaa agccctgctt ttggaggcca tcggcgagtt ggtcgaattg
     4801 cagaaggcaa gccgtgaagg ggttttgccc gaatatgacc gtgaaacgat gctgcgcgaa
     4861 atcaacctgt tcccggaatg gtttgtcgca aaagaattgg ggcgcgaatt aacattcaaa
     4921 caacgccaac tttggcagca aaccgtcgat acgctgctgc cgcccctgtt ggcgcagccc
     4981 aaagtctatg tgcaccgcga ctttatcgtc cgcaacctga tgctgacgcg cggcaggccg
     5041 ggcgttttag acttccaaga cgcgctttac ggcccgattt cctacgattt ggtgtcgctg
     5101 ttgcgcgatg cctttatcga atgggaagaa gaatttgtct tggacttggt tatccgctac
     5161 tgggaaaagg cgcgggctgc cggcttgccc gtccccgaag cgtttgacga gttttaccgc
     5221 tggttcgaat ggatgggcgt gcagcggcac ttgaaggttg caggcatctt cgcacgcctg
     5281 tactaccgcg acggcaaaga caaataccgt ccggaaatcc cgcgtttctt aaactatctg
     5341 cgccgcgtat cgcgccgtta tgccgaactc gccccgctct acgcgctctt ggtcgaactg
     5401 gtcggcgatg aagaactgga aacgggcttt acgttttaaa cccaatcaaa atgccgtctg
     5461 aaaaccaagt ttcagacggc atttttcaaa cgggcttact gcgcggcttt ttgttcttcg
     5521 cgtactttgt ccgccaaaag gtcgatggtg tgcataccgg actcccagtc ggcaaattcg
     5581 actttatatt tgccgccgac gataaccgtg ggcgtaccgt cgatttggaa ggtttcggtc
     5641 agctcctgca ttttgtcggc gcgcgcctgg ctttcggggg actcgtaggc ggcaaggact
     5701 tttttgccgt caaaggcggt ttgttcgccc agccattttt tgaggacttc cggctcttgc
     5761 agcttgattt tttggttgac catcgcatcg aaaatatggc tgttcgccac atctttgctg
     5821 tcggcggcag ccatatcgac ggcggcggcg aggcgtgcga gcgtcagcat ttctttctgc
     5881 cagacgacgt gttcggtacg caggtacata tcgtctttaa aagacttggc gtgtttgctt
     5941 aaaacaggtt cgaggtgggc gcagtgcgga cagaaatagc cgaaaaattc aaggacttcg
     6001 actttgcctg cctgctgttg gggaatcggg ttggcaagga cggtatagtt ttgcccttcg
     6061 accagccctg ccggggcggc ggctgccgaa gcggcaggcg cgctgtcggc ggggacgctg
     6121 gtttggactt tgctgtcgca cgcggcaagg gcgaacaggg cggcaacgcc gagggcgagg
     6181 tgtctggatt tcatacggct ctccgtgatg ttggaaacag atgttggaaa tcaatcggaa
     6241 tccggctatt ttattgcatt tccgcgtgtt gatacagttt gccgccggaa aaggaagctt
     6301 tcgtttcggg aaaccgcttc agacggcatc aaacccgatg ccgtctgaag cggtttctgt
     6361 cgtacaatac gcgccgttgc cccaaacggg tacgactgtt gaggaacaat gatgaatatg
     6421 ctgggagctt tggcaaaagt cggcagcctg acgatggtgt cgcgcgtttt gggatttgtg
     6481 cgcgatacgg tcattgcgcg cgcattcggc gcgggcatgg cgacggatgc gttttttgtc
     6541 gcgttcaaac tgcccaacct gcttcgccgc gtgtttgcgg agggggcgtt tgcccaagcg
     6601 tttgtgccga ttttggcgga atataaggaa acgcgttcta aagaggcgac ggaggctttt
     6661 atccgccatg tggcggggat gctgtcgttt gtgctggtca tcgttaccgc gctgggcata
     6721 cttgctgcgc cttgggtgat ttatgtttcc gcacccggtt ttgccaaaga tgccgacaaa
     6781 tttcagctct ccatcgattt gctgcggatt acgtttcctt atatcttatt gatttcactt
     6841 tcctcttttg tcggctcggt actcaattct tatcataagt tcggcattcc ggcgtttacg
     6901 cccacgttcc tgaacgtgtc gtttatcgta ttcgcgctgt ttttcgtgcc gtatttcgat
     6961 cctcccgtta ccgcgctggc ttgggcggtc tttgtcggcg gcattttgca gctcggcttc
     7021 caactgccct ggctggcgaa actgggtttt ttgaaactgc ccaaactgag tttcaaagat
     7081 gcggcggtca accgcgtgat gaaacagatg gcgcctgcga ttttgggcgt gagcgtggcg
     7141 cagatttctt tggtgatcaa cacgattttc gcgtcttatc tgcaatcggg cagcgtttca
     7201 tggatgtatt acgccgaccg catgatggaa ctgcccggcg gcgtgctggg ggcggcactc
     7261 ggtacgattt tgctgccgac tttgtccaaa cactcggcaa accaagatac ggaacagttt
     7321 tccgccctgc tcgactgggg tttgcgcctg tgtatgctgc tgacgctgcc ggcggcggtc
     7381 ggactggcgg tgttgtcgtt cccgctggtg gcgacgctgt ttatgtaccg cgaattcacg
     7441 ctgtttgacg cgcagatgac gcaacacgcg ctgattgcct attctttcgg tttaatcggt
     7501 ttgatcatga ttaaagtgtt ggcacccggc ttctatgcgc ggcaaaacat caaaacgccc
     7561 gtcaaaatcg ccatcttcac gctcatctgc acgcagttga tgaaccttgc ctttatcggc
     7621 ccactgaaac acgtcggact ttcgcttgcc atcggtctgg gcgcgtgtat caatgccgga
     7681 ttgttgtttt acctgttgcg cagacacggt atttaccaac ctggcaaggg ttgggcggcg
     7741 ttcttagcaa aaatgctgct ctcgctcgcc gtgatgggag gcggcctgta tgccgcccaa
     7801 atctggctgc cgttcgactg ggcacacgcc ggtggaatgc aaaaggccgc ccggctcttc
     7861 atcctgattg ccgtcggcgg cggactgtat ttcgcatctc tggcggcttt gggcttccgt
     7921 ccgcgccatt tcaaacgggt ggaaagctga ccgatgccga tatccttttt cggaaaacgc
     7981 tttttccgcg cctatattcg ggcgcgcatc ccccgcgtcc gcaccagccg gacgggctgc
     8041 cgcatcatca atgccgtctg aaaacagaaa aaccgatacc ttatgatttt gacaccgccg
     8101 gacacaccgt ttttcctccg caacggcaat gccgatacga ttgccgccaa attcctgcaa
     8161 cgccccgcac ccgcataccg ccgcgagctg cttcccgaca gcacgggtaa aaccaaagtc
     8221 gcctacgact tttcagacgg catttcgccc gatgcgccgc tggtcgtgct gtttcacggt
     8281 ttagaaggaa gcagccgcag ccattacgcg gtcgaactga tgctcgcggt acgcagccgc
     8341 ggttggcacg gcgcagtcgt ccatttccgc agctgcggcg gcattgccaa caccgctccg
     8401 gtgttctacc acttgggcga taccgccgaa atcgccttta ctttggacac gcttgccgcg
     8461 cgttaccgtg aaatatacgc cgtcggcgta tcgctgggcg gcaacgcgct ggcaaaatat
     8521 ttgggcgaac agggcgaaaa cgcgctgccg caagccgccg ccgtcatctc cgcacccgtc
     8581 gatgcagagg cggcaggcaa ccgcttcgac agcggcatca cacggctgct ctacacgcgc
     8641 tacttcctcc gcacactgat acccaaagca cggtcgctcc aaggttttca gacggcattt
     8701 gccgcagggt gcaaaacact gggcgagttt gacgaccgct tcaccgcacc gctgcacggc
     8761 tttgccgacc ggcacgacta ctaccgccaa acttcctgca aaccgctgct caaacacgtt
     8821 gccaaaccgc tgctcctgct caatgccgcc aacgacccct tcctgccgcc cgaagcgctg
     8881 ccgacaccgg acgaagtgtc cgaagccgtt accctgttcc agccggcaca cggtggtcat
     8941 gtcggctttg tcagcagtac cggcggcagg ctgcacctgc aatggctgcc gcagaccgtc
     9001 ctgtcctatt tcgacagctt ccgcacaaac aggcgttaac ggtttgatgc taatattccc
     9061 cctttccccg gacgaatacg gaacacaata tgaccgacat cctcaataaa atccttaccg
     9121 ccaaggcaca ggaagttgcc gcccaaaaag ccgccgttcc cctcgaacac atccgcgcac
     9181 ttgccgcaga agccgcgccc gtccgaagct tcatcggttc gatacgcggc aaacaccgcc
     9241 taaacctgcc cgccgtcatt gccgaaatca aaaaggcaag cccgagcaaa ggcctgatcc
     9301 gtccggactt ccgaccggcc gagattgcac gcgcctatga aaacgccgga gcggcgtgtt
     9361 tgtccgtact gaccgacgaa ccctatttcc aaggttcgcc cgaatacctc aaacaggcgc
     9421 gcgaagccgt atcgctgccc gtcttgcgta aagacttcat catcgacgaa tatcaggttt
     9481 atcaggcgcg cgcctggggg gcggatgccg tcctgctgat tgccgccgca ctggaacggg
     9541 aacaattgga acgctttgaa gcggtggcgc acgaattggg tatgaccgtc ctgctcgagc
     9601 tgcacgatga aagcgaattg gaaaaatgcc gtaacctgac cacgccgttg tggggcgtaa
     9661 acaaccgcaa cctgaggact tttgaagtct ccctcgacca aaccctgtcg ctgctgcccg
     9721 cactggaagg caaaaccgtc gttaccgaaa gcggcattac gggtaaggcg gatgtggaat
     9781 ttatgcgggc gcgcggcgtg cacaccttcc tgatcggcga aacgttcatg cgtgccgacg
     9841 atattgaggc ggaagtgggc aaactcttct aaatcccgat ttcagacggc atattgccgc
     9901 caaccgacca acacccttac cgagcacgga accatcatgc accgaccgac cgccaaacag
     9961 attctgcacg aagtatttgg ttatcccgaa tttcgcggca ggcaggaggc tgtcatcaat
    10021 actttggcag gcggcgggag tttgacggtg ctgatgccga cgggcggcgg caagtctttg
    10081 tgttaccaga ttcccgcgct gatgtgcgaa ggcgtggcgg ttgtcgtatc gccgctgatt
    10141 gcgttgatga acgaccaagt ggcaaacctg cacgccgccg gcatcgaagc ggcggcagtc
    10201 aacagcggca catcggcaga tggggcgcgc gagattgccg acaagcttgc ccaaggccgt
    10261 ctgaaactgc tttatgtcgc accggaacgc ctagttaccg accgcttttt gcgttttctc
    10321 gaccaacaaa ccgtcagcct gttcgccatt gacgaagcgc actgcgtcag ccagtgggga
    10381 cacgatttcc gccccgaata ccaacagctc ggcatccttg ccgaacgcta tccgaacgtc
    10441 ccgcgcatcg ccctgaccgc taccgccgat gccgccacgc gcgccgacat caagcattat
    10501 ctgcacttgg acaatgcgcc cgaatttgtc tccagcttcg accgtccgaa tatttattat
    10561 caggttatcg aaaaaaacaa cggcaaaaaa caattgctgg atttcatccg caaagaaatg
    10621 acggggcaaa gcggcattgt gtattgccta agccgcaaaa aggttgaaga tgtggcgcag
    10681 tttttgcgtg aaaacggatt aaacgcgatt ccgtatcatg ctggtttgag catggacgtg
    10741 cgcgaggaaa accaacgccg ctttacgcat gaagacaata ttatcgtggt ggcgaccgtg
    10801 gcgttcggca tgggcataga caaacccgac gtgcgctttg tcgcccatct cgatatgccc
    10861 cagagtgtcg aacatttcta tcaagaatcg gggcgtgccg gccgggacgg gctgcctgcc
    10921 gcgagctggc tgtgttacgg tttgaacgat tgggtgttgc tgcgcgaacg gattgccgaa
    10981 ggcaacagcg acgaggtgca aaagcaaatc gaaatgcaaa aactcgatgc catgctttcc
    11041 gtctgcgaaa ccgccgcctg ccgccgcgta ctgctgctca aacatttcgg cgaagaatcc
    11101 gaaccctgcg gccattgcga caactgcctg catccgcccg tacggtttga cggcacggtg
    11161 ttggtgcaaa aattactcag ctgcgtgtac cgcgccggac aacgttttgc cgccggttac
    11221 atcaccaacc ttttgcgcgg caaaagcgac gattggatac gcggcaaccg gcacgaacaa
    11281 ctgtccacct tcggcatcgg tacggagttg tccgacaaag aatggcgcag cgtcatccgc
    11341 cagtgtatca gcctcggcta cctcaccgtc aacattaccc gatatcaggc attgcaactg
    11401 accgaagccg ccaaaaaagt cctcaaaggc gaaaccgaag tgatgctgcg tccgctcaag
    11461 cgcgacaagc ccgccgcccg caccctcaaa gacaactggc tgcgtaccga acgcgaagaa
    11521 cgcctgtggc aggcattgcg cgtttggcgt atgaaacagg cagaagccga agtcatcccc
    11581 gcctatatga ttttcggcga caaaaccctg cgcgaccttg tcgaaaaaat gccgcaagac
    11641 ctcaacggac tgcacgacat ctacggtttg ggcgaagcca aaatcgaccg tttcggacac
    11701 ggcatcctcg aagtctgccg caacaccgcc ggcttcagtc gcgacgcggt catccgtccg
    11761 caaaccgaac gcgaacaaca actgcgtcaa aaactcgagg cctggcggta tgaacaggca
    11821 agggcggaaa actgcgccct gcatgccgtc ctctccgacg aaagccttgc cgatatgctt
    11881 gccgccacgc ccgaaaccga aaccgacctc gaaggcgtac acggcttggg cagcgtacgc
    11941 gccgccaaat acggacggga catcctcgcc gtctgccgtc cgttttcaga cggcatcgat
    12001 gaagccgcca aacgcaaacg ccgcctgatg cgcgccctga tccaatggtg cggcgaaacg
    12061 gcaaaacacg aacagtccga accctaccgc attctcagca aagccgccct gcgcgccatt
    12121 gccgccaaac agccgaaggg tttggcggag cttgccgccg tatacggcgt gggcgaagaa
    12181 aaaaccgcac gttacggtgc ggcggtgttg gcggtgttgg gacaaaatgc cgtctgaaaa
    12241 ccgttaccaa gtttcagacg gcattgcctc tatttaaaaa ttcct
//
LOCUS       DBBZYD010000062        12024 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.062, whole genome shotgun sequence.
ACCESSION   DBBZYD010000062 DBBZYD010000000
VERSION     DBBZYD010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12024
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.062"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..305)
                     /locus_tag="ACJJDL_001410"
     CDS             complement(<1..305)
                     /locus_tag="ACJJDL_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7574111.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELIIPDY"
     gene            complement(456..848)
                     /gene="rpsI"
                     /locus_tag="ACJJDL_001411"
     CDS             complement(456..848)
                     /gene="rpsI"
                     /locus_tag="ACJJDL_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HGG7574112.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(858..1289)
                     /gene="rplM"
                     /locus_tag="ACJJDL_001412"
     CDS             complement(858..1289)
                     /gene="rplM"
                     /locus_tag="ACJJDL_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HGG7574113.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1467..1646)
                     /gene="ssrS"
                     /locus_tag="ACJJDL_001413"
     ncRNA           complement(1467..1646)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACJJDL_001413"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1652..1957)
                     /locus_tag="ACJJDL_001414"
     CDS             complement(1652..1957)
                     /locus_tag="ACJJDL_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HGG7574114.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMATLNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1968..2297)
                     /locus_tag="ACJJDL_001415"
     CDS             complement(1968..2297)
                     /locus_tag="ACJJDL_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574115.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(2352..3341)
                     /locus_tag="ACJJDL_001416"
     CDS             complement(2352..3341)
                     /locus_tag="ACJJDL_001416"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HGG7574116.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEERE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3464..6166)
                     /gene="ppc"
                     /locus_tag="ACJJDL_001417"
     CDS             complement(3464..6166)
                     /gene="ppc"
                     /locus_tag="ACJJDL_001417"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HGG7574117.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPRSRINIVPLFETIEALENACPVMETMFRLDWYDALLESCGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPDKAKVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            6209..7102
                     /locus_tag="ACJJDL_001418"
     CDS             6209..7102
                     /locus_tag="ACJJDL_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG7574118.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINYNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
     gene            complement(7502..7726)
                     /locus_tag="ACJJDL_001419"
     CDS             complement(7502..7726)
                     /locus_tag="ACJJDL_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HGG7574119.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDTQEPYSLRDEIPPHY"
     gene            complement(7727..9115)
                     /locus_tag="ACJJDL_001420"
     CDS             complement(7727..9115)
                     /locus_tag="ACJJDL_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HGG7574120.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGMMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(9201..10022)
                     /gene="prmC"
                     /locus_tag="ACJJDL_001421"
     CDS             complement(9201..10022)
                     /gene="prmC"
                     /locus_tag="ACJJDL_001421"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HGG7574121.1"
                     /translation="MTFDKWLGLSKLPKNEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(10537..12021)
                     /gene="tldD"
                     /locus_tag="ACJJDL_001422"
     CDS             complement(10537..12021)
                     /gene="tldD"
                     /locus_tag="ACJJDL_001422"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HGG7574122.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVRERLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
BASE COUNT         2500 a         3281 c         3402 g         2841 t
ORIGIN      
        1 ctgtaatcgg ggatgatcag ttcgtcgaaa cggcaaaaca ggttgaaatc gatgcgggtg
       61 atgaggctgt gttcgagttc gggatcggag aggctgtgcc attgtccgag caggacggct
      121 ttgaacatgg acaacagggg ataggcggga cgaccgcggt ggtctcggag gtaacgggtt
      181 ctttgacggt tcaggtattg ttcgatcggt tgccaatcaa tcacttgatc tagcttcaat
      241 agtgggaagc ggtcgatgtg tttggcaatc atggcttgtg cggtttgctg aaagaaggtg
      301 ctcatggaaa atcccctaaa tggcttggtg ggaatttagg ggattttggg gaattttgca
      361 aaggtctcaa tctgtaatct ttagattgcc aatgggaaac cgtctactac aaataaaaaa
      421 ccctgcgata agcagggttt tttgaatttc caacattaac gtttggagaa ttgttttgca
      481 cggcgtgctt tgcgcagacc cggtttttta cgttcaactt cgcgggcatc gcgggtaaca
      541 aaaccagctt gagacaaggc gggtttcaac gcggcatcga agtcgatcag ggcacgggta
      601 atgccgtggc ggattgcgcc ggactggccg gtttcgccgc cgccaacaac attgactttg
      661 atgtcgaaag attcggcgtt ttcagtcaga accaagggtt ggcgaacaac cattcggctg
      721 gtttcgcgtg cgaagaattc gtcaacggga cggccgttta cgatgatttg acctgtacct
      781 ttaatcagga atacacgagc cactgaactt ttgcggcggc ctgtgccgta gtagtattta
      841 ccgttcatgt cgcgtcctta tttcagttcc aaaactttgg gttgttgcgc agcatgggcg
      901 tgttccgcac ccgcatacac tttcagtttt ttaatcatgg cgtaacccaa aggacctttg
      961 ggcagcatac cttttacagc ttgttccaaa gcgcggcccg ggaattgctc ttgcatttcg
     1021 cggaaagtgc gttcgtagat accgcctggg aaaccggaat ggcggaagta ttttttatct
     1081 tcgaatttgg caccggttac acgcagtttg tccgcattga taacaatgat gtaatcgccg
     1141 gtatcgacgt ggggggtgta ttcaggtttg tgtttgccac gcagacggct ggcgacttcg
     1201 gccgcaacgc gacccaagac tttgtcttgg gcatcgatga cgaaccattc gcgcttcacc
     1261 tcgtggggtt tcgctgaaaa ggttttcata gtggaaatcc agatagatat agaaagttgt
     1321 aaattttaaa gacaggattc gattttgtca atcgcattac cgcgttacgg aaggattttc
     1381 cggatttcgg cagactgcat actgcttttt cgggcggggc ggcggccaat gtgaaaaacc
     1441 gcatcgttgc gatgcggttt tgaatgggaa tccccgcgag agccgtttcg gccgaatccg
     1501 cttgaacctt gctgacaagg cggctgcctc gggtagtttc gggtgcgtcc gcaaaaggac
     1561 gctcgcgccc actactgctc ccggcaacct taagcgaact tattggttca aaggaatata
     1621 tgccttcgcg gacaccgcag ggaaaaaggg gttattcctg cgccaagcgg gatagtgctt
     1681 tttggcaggc gttgtccata tcggctattt tacgcgcaaa atcgccgatt gccaaatcgc
     1741 cgccgttcag ggaggttttc aacaggtcgt ggacgacgtt gagcgtggcc ataatgacga
     1801 ttttttcgct gtccgcgacg cgtccgcctt cgcggatggc ttcggctttg ccgttgagca
     1861 ttccgactgc ctgcaacagt gtgtcttttt cttctgccgg cgtgttgacg gtcagccggg
     1921 cgtgcatgac ttcgatgtgg acttgttcga tgttcatcct ttaatcctta ttgctgcgtt
     1981 tcctgccatt gggggaggcg cgctgccagt gcgctgattt tttccctgct ctgttcgagc
     2041 aggctgcggt atcgtgtatt ttcttctgtc aggctgtcga ttttgttttg caggtcttct
     2101 ttgagtttgc cgacttggac gagcagggct tcgctgagtt cgtcgacggc ggtttcgtgt
     2161 tcgagttttt gccgctcgtg cgcccgtttg agttcggcga cggtttcttt gaggcggcgg
     2221 ttttcgctga cgagggtttc gaatttttgt accagcgtat aaacgctgct ttcgagtttt
     2281 tcgatatttt gtttcataac cttacctgtc cgtatgccgt ctgaaggcct cagacggcat
     2341 ctgtctgttg tttattcgaa acgcgcgctg cgttccatca gtctttcgac gacctgctga
     2401 ggggtcattt ctttgcggat gagttgcagc agggtttggg taatcggcat gtcgatttgg
     2461 tacttacagg cagtattgaa gacttcttct atcgtgctga ccccttcgga aacgtgtccg
     2521 atttcgacca gcacctgatg cagttccttg ccttctgcca aacccaagcc gacgcggcgg
     2581 ttgcgtgaga gtgcgccggt gcaggtcaag atgaggtcgc cgatgccagc aagccccatc
     2641 atggttttgg gctgtgcgcc cattgcggag gcaaggcggg tgatttcggc cagtccgcgt
     2701 gtaaccagtg cggcacgggc gttaagcccg tactccagac cgtcggacaa tccggtggca
     2761 atcgccatga cgtttttgac tgcaccgccg actgccacgc cgataacgtc ggtactgccg
     2821 taaagcctca tgacggtcgt gttgagctgc ggtacgagtt cttcaatcca ctcttggttt
     2881 tcggaggcga ggacgacggc gcagggcagt tgtttggcga gttcctgtgc aaaactcgga
     2941 ccggaaagta cgccgatttt tttattgtcg ggcaatactt ctttcaatac ttgaaaggtc
     3001 agcagccctg tatcctgctc gaatcctttg caggcggcga ggacggggag gtgtcccgcg
     3061 ccgtactgtt tgagcaactc tgcgctgctt ctcaatccgg caacggaggt tacgataagg
     3121 acaagtccgc tgtctttgag cgcgtctgcc aaatccgcac acacttccaa ggtttcggga
     3181 aaggaaaagc cgggcagtcc gcgtttgttt tcacgttctt cctgcatttg gcggacttgg
     3241 tctgcgttgc gcgtccacag ggatacgcgg ttgccgtgtt gggaaaaatg cagggcgagc
     3301 gccgtacccc acgaacctgc gccgataacg gtaattttca ttggtcgtct ttcaacatat
     3361 cactgccgtt cactttaaaa caatcggtgt ttctctgcaa gtgcggtcag ggaaatgccg
     3421 tctgaaaggc gttcagacgg cattttgccc cgatgcggca ctatcagcct gtattgcgca
     3481 aaccttgcgc cacgccgttg atggtcaggt gcaccatcag aagggcgtgc ggattgtcgg
     3541 gttctttacg caggcgtttg agcatggcga cttgcaggcc gttgagggcg ttcaaatatg
     3601 gaatcctcaa ggcaagcgaa cgggcgaggc tgcggttgtc gcgcaggagc tcttcggttt
     3661 gcagcaagtc gagcagtgct ttgcggctgc gttggtattc ttccttgatc atgccgaaga
     3721 tgacttttgc tttgtcgggt gattcgctca agccggcata gttttccgcc aaggtgatgt
     3781 cggttttcgc catcacttgt tccatattgg agagcatggc ttggaagaac gggttgcttt
     3841 gggcgtgttc gcgcagggcg gcgagcgttt cgggtttgtc ttcgcacaag gtttccaccg
     3901 cgctgccgaa accgtaccaa gcaggcagca tgaggcggtt ttgcatccag gaaaataccc
     3961 acggaatcgc gcgcaagtct tgaatccgcg ctaaggtctt gcggctggcg ggacggctgc
     4021 cgaggttgag ggtggcgatt tcctgaatcg ggctggtttg caggaagtag tcgatgaagt
     4081 cggggtgggt aatcagttcg cggtagtatt tgaacgatac gtccgacaat gcctgcatca
     4141 gtttggcatc agggtctttt ttatccggca ggatgctggc ttccaaagtc gcggcaacca
     4201 aggtttccaa gttgcgttgg gcattgccgg ggtcggcgta tttggcggta atgacttcgc
     4261 cttgttcggt aatgcggatt tgtcccgcca cgctgcccgc cggttgggcg agaatggctt
     4321 ggtaagaagg gccgccgccg cgtccgacgc tgccgccgcg accgtggaac aggcgcatgc
     4381 ggacatcgta ttttttgaag agttcgacca agcccaattc cgcctgatac agacaccatg
     4441 agctggtaac atagccgccg tctttgttgg agtcggagta gccgagcata atttcttgga
     4501 tgttgccgca gctttcgagc agggcatcgt accaatcgag gcggaacatg gtttccatga
     4561 ccggacaggc gttttcgagt gcttcgatgg tttcaaacag cggcacgata ttgatgcggc
     4621 tgcgcggttt gccgttttcc accgccagca ggccgctttc tttcagcagc aatgccaagg
     4681 cgagcaggtc gctgggttgt tcgcagttgg aaataatgct ttgtgtaacg gcatcttcgc
     4741 cgaattcgtc tttgattttg cgcgcttcgt tgaaaattgc cagttcgtgg cgggtatggt
     4801 cgctgtatgt gatgaacggg ctgtacagcg gacgttgatg gctcaattcg cgcaacaggg
     4861 cggcttgttt ttgctcttcg ttcaggctgt tgtagtcttc caagcctgcg tgttggaaaa
     4921 gctcggcaac cacatcggcg tgtttgcctg cgtgttggcg caggtcgagc ggcatcatgt
     4981 ggaagccgaa cacggacacg gaacggatga ggtctgccaa acggccttca gcaagcaggc
     5041 ggctgccgtt gtcgataagg gaacgttgca attttttcaa atcatcgaga aattcttgtg
     5101 ccgaagcata cggctcgaga aagccgaatt tgcagcccat gcccaaaccg agcgcgcgcg
     5161 ctttgcccat agcgcgtgcc atgatgtagg cgatggcgcg gcggtagggt tcttcggtac
     5221 gggcgatttc ttcgtcaggc gagagggcgg ccagtgccat tacgtcgtcg ttgactttga
     5281 cgcggcggat ggagagcggc agttcgcggt aaagtttgtc gagttcgcca cggtaaaaac
     5341 ggaacacggc atcggcgtgg cggcggaagg caaaacgcaa ggtttcggca gaaacgaacg
     5401 gattgccgtc gcggtcgccg ccaatccagc cgccgatttt gaggatattc ggaacgcaga
     5461 catcgggata gaccatctga aagtcgtgtt ccatcttgcg gtagagcttg ggcagggctt
     5521 cgaaaaagct catcgggaag atggacacgc cgttgttgat ttcgtcgttg acgctgagtt
     5581 tgtggcggcg cgtttcgctg gtctgccaca agcccagcag gatagtgtcg atttcgcggc
     5641 gcagccgtgc cagcgcgtcg gcattggtgc agcgttcgcg ttgcggcaac agtgcgcgga
     5701 tgcggcggtt gaagcttaag acggtttggc gttgcacttc ggtcgggtgc gcggtcaaaa
     5761 cggcggtaac ggacgtattg tccaactgcc gctgcaccga tttgccgtcg gctttccccg
     5821 ctttgagcct gcggacggtt tccgtcaggc tgccttccgc gccgccgcgt ccggcttctt
     5881 cgtggatttg gcggcggcgt tcgtggtgca cgtcttcggc gatgttcaaa atctgtgcga
     5941 acaggccgca ggccaaggtt aaatcgtggg tttgttgttc gtccaattgc ggcaatactt
     6001 tttcaatcaa tgccgcgctg tcgtcggaag tggacaagag tttgaccgtt tcgacaacca
     6061 atggcgaggc ttcttcgtgc aggaggttga acagggattg tttcagaaat tccgcgtccg
     6121 ccgccaaagc cgcgtccttt ggattgttca gaatatgcag ttgcatgatt tttctctcat
     6181 tgccgtaaat actgtaaatg tacctcaaat gccgcatccg tgccaaaccg ttcacacttt
     6241 aaccgcccgt gtcccgaaat gccgtctgaa gttgaacgcc gcccgacggc agcgttacaa
     6301 tcgcccacaa ctgttttttc cgaacatcat catgaccacg accgaacacg acaacgacga
     6361 tgcattcctg ctgcggtaca gccgccacat cctcttggac gaaattggca tcgaagggca
     6421 gcagaaactt tccgccgcgc atattttggt cgtcggctgc ggcggtttgg gtgccgccgc
     6481 cctgccctat ctcgccgctt ccggcatcgg cacgctgacc atagccgatt ccgacacggt
     6541 cgagctgcac aacctgcaac gccaagtcgc atttgacgag ggcgatgtcg gcaagcccaa
     6601 agccgaagcc ttggcagacc gcctgaaacg catcaactat aacgtcgatg tccgcaccgt
     6661 caacgaaaaa ctcgacggct gccgcctgac cggtttggtt caaaccgccg acatcgtttt
     6721 agactgctgc gacaactacg ccacgcgcca agccgtcaac cgtgtctgcg tacaaacgaa
     6781 aacaccgctg gtttcaggag cagcggtgcg ctttgaaggg caacttgccg tgtaccgtcc
     6841 cgacttgccc gactcgccgt gttacgcctg cctgtttgac ggcggatcgg cttcagacgg
     6901 catctgttcc ctcttcggcg tgttctcgcc gctggtcggc atcatcggca gtacccaagc
     6961 ggcggaggct ctgaaaatcc tgctggatgc gggcgaaccg tcgcacggca ggctggcggt
     7021 ttaccgtgcc ttggaagggg gctggcaata tttcgacctg ccgcgcaacc ccgaatgccc
     7081 gatttgcggc gcggaacggt aaaaccctgc cgccgtttca gacggtatcc aaacggatgc
     7141 ggcggaacgg ttttaaaaat ttaaaaattt acatttcttt gcaaaaaaaa ataaacttac
     7201 cttataattg cagttgtttt agcaatgtct gtttcgcaga ctcattgagt aagacgtttt
     7261 ccccgtaatg tgtttggccg tctgtcccct ttgggttcgg acggcttttt ttaggctgtg
     7321 tttgaatacc cggttggttt cgtctgtttg caggggaaaa ccgcttattt ccgttcgggc
     7381 ggaaaacggt tccatcggat aaaaggcatt ttgtccgact gattaaagtt acatcttagg
     7441 tttgcatcgg caaaatattc aaacacagcc ttttttaagg aaatccggat acggcggcac
     7501 atcaataatg cggcggaatc tcgtcgcgca gggaatacgg ctcttgcgtg tcgggattcc
     7561 tgtcctgcat tttttgatac agcagcctca actgagcctg ctgcaaatcc agcgtctgcc
     7621 gcaattccgc caccatcgcg ttcaggccgg cgattacgtc ctcctgaagc gcggattgga
     7681 tttccagctc tgtgatgcgg tgttccaact cttgaaccgc gtccatttac agcaccatcg
     7741 cggcaatcca gccggcaatc agcagcggga tattgtagtg gatgaaggtc gggataacgg
     7801 aatcgcggat gtggtcgtgc tgcccgtcgg cgttcagccc catcgtcggg cccagcgtgg
     7861 aatcggacgc aggcgaaccg gcatcgccca acgcccccgc cgtgccgaca atggcgacgg
     7921 tggcaagcgg cgaaaaaccc aaaccgacac acaaaggcac ataaatcgcg gcaataatcg
     7981 gcaaagtgga aaaggacgaa ccgatgccca tcgttaccaa aagccccacc accagcatcg
     8041 ccaatgccgc catacctttg ctgttgccga atatcgccat actgctttcc accagcggct
     8101 ggatatgccc ggtcgcattc atcacggcgg caaaaccctg cgcggcaatc ataatgaagc
     8161 cgaccatcgc catcatcttg ataccttcgc cgaatacgtc gtttgccttg tcgcggttga
     8221 tgacccccaa catcataaat acggcgaaac cgagcatcgc gcccaacacc agcgagtctt
     8281 catacatcaa ctggatggca aaacatacgg caatggcggc ggcggcggcc aggctgcggt
     8341 aggcggacgg ctgcggacgg tttgccgcat cggcgttgcc cgccgtatcg gcattgttgc
     8401 tttggtacag gcgcggtttg cggtaatgga caaacgccag caggagtccg gccagcattc
     8461 ccaacgcggg aatcgccatt gccgccatca cgttaatgtt tttcacatca agctgcggcg
     8521 cggcggaatg gatgttgccc aacaggattt cgttcaaaaa aatcgcgccg aagccgtaag
     8581 gcaggaacat ataagtcgta accagcccga aagtgatgac gcacgcaatc aggcggcggt
     8641 cgattttcag gcggttgaac accaaaagca gcggcggaac aatcatcggg ataaaggcaa
     8701 tgtggatggg gatgatgttc tgactcatca tgcccatcac aaggatgatg gaaagcagca
     8761 gccatttgac cgcgccctcg cccgaacgca cgctgtcggg cataccgccc cggttcagtt
     8821 tgcggacgac cgcgccggca agctgctgcg gcaggccgga atgggtaatc gccatcgcaa
     8881 acgcaccgag catcgcataa gaaagcgcaa tcttcgcgcc gccttccaaa cctttgttga
     8941 acacggggat aatccccgcc tgactgacct gtcccgccgc atcggcaatg ttttgcagcg
     9001 gcatacccgc caccgcgccg ccgacaaacg cgccgaccgt caggctcaat accacgtgca
     9061 cgcgcgacag cgacagcacc agcataacga ttacggcaac tacgactgca ttcattgttt
     9121 atcgctccaa acctataaat gtttacatat cgaaacacat cataacccaa taacggaaaa
     9181 cccgccaatt ttgcaaacaa ttatttcaaa tgcttcatat acttccccag cgtaaccctg
     9241 tccaaacccg ccaagtccgg cagggtttcc actcccgaaa aaccattctc cgccaacacg
     9301 ccgcgcaccg ccgcgccctg atcgaaaccg tgttccagca ataaaaaacc gccttccgcc
     9361 aaacggtcgg gcgcgccttg cgccaaggta cggatgcagc ttaggccgtc tgaaaagtcg
     9421 gtcagcgcga tttgcggctc aaaccgcaaa tcgccttgcg acaaatgttt atcgccgttt
     9481 tcgatatagg gcgggttgga cacgatgatg tcccatttcc cttcagacgg catatcggtg
     9541 tcgaaccacg aaccgtgtgc aaattcgacc cgcgcgccca aatccgccgc atttttccgc
     9601 gccgtttcaa gggcgggcgg gctgatgtcg gatgcgcgca caaacgcatc ggggcgttcg
     9661 agcgcgacgg ttacggcaac cgcgccgctg cccgtcccca aatcccacac gcgcccgttt
     9721 tcgggcaggc gcgccaatac ggcttcgacc aagtgttcgg tttcggggcg cggaatcagc
     9781 acgctcggat tgactgtaaa gcgtctgcca taaaattcgc gcacacctaa aatataggca
     9841 accggctcgc cgttcagacg gcgttgcgcc agcctgtccg cccgctgtcg gacttcgtcc
     9901 ggcatttctt ccccgccccg cgtcaacaac tgcacgcgcg tatattccga aacatattgc
     9961 agcagcattc ttgcttcatt tttaggcagt tttgacaagc ccaaccattt atcaaacgtc
    10021 atttttatcc cgtctgccgc tgatgcggct tttctttcct tattctttcc ggcaaacgta
    10081 ccgatggtgg caaccgcaaa tgcggcatac cacaaataaa atcctgcacc gtagcgcaca
    10141 atatccgatg tattccctgc ttcatcgacg tatacggctt tcacactgaa agccaccaac
    10201 gccaagcccc aaagtgccgc atggacaggc acgaccttct tccgcaacgc cagcaaaaca
    10261 atggccgcca accaaacata attcgcatag accgcacaat acctgatatc caaagaagca
    10321 aatatcgacc ccaaaatcaa aacggtcaaa ccctccatgc ttccatgatt gcccaaataa
    10381 aatgcaacat tggataaaga cgctatccac agggcaaccg acaccagcaa catcactatg
    10441 ggaaaacttg atttccgatt ctgttcctgc atggttttat cctaatgtaa aaggccgcct
    10501 gaaaaccttt cagacggcat cgtgccggat tccgcgtcag attgcgctgc cgccgacggt
    10561 cagcccggca tcgatacgca gggtcggctg ccccacgccg acggggacgc tctgcccttc
    10621 tttgccgcac acgccgacac cgctgtccaa cgcggtatcg ttgcctatca tcgaaacgtg
    10681 tttcagcact tcgggcccgt tgccgataat ggtcgcgcct ttgacggggt attgcagcct
    10741 gccgccttcc acccaccatg cttcggacgc gctgaacaca aatttgccgc tggtaatgtc
    10801 cacctgtccg ccgccaaagt tgacggcgta aatgcctttg tcgatggacg cgatgatttc
    10861 ttccggctca tagctgccat tttccataaa ggtattggtc atgcgcggca tcgggacgga
    10921 ggcgtagctt tcgcggcggc cgttgccggt ggattgcgta cccgtcaggc gggcattggt
    10981 ttcgtcctgc atatagccga ctaaaatgcc gtcttcaatc aatacggtgc ggcgggtttc
    11041 gttgccttcg tcgtcgatgt tgagcgaacc gcgccggccg gcaatatcgc cctgatcgac
    11101 gacggtaacg cctttggcgg cgacgcgctc gcctattctg ccggaaaaga cgctggtccc
    11161 cttgcggttg aaatcgcctt ccaaaccgtg tccgaccgct tcgtgcagca acacgcccgg
    11221 ccagccgttg cccaaaacga cggtcatttc gccagcgggc gcggggcggg attcgaggtt
    11281 ggtgagtgcc tgtttgacgg cggcatcgac aaactgccgc accaagtttt catcgaaata
    11341 agccaagtcg tagcgtccgc cgccgcccgc gctgccctgt tcgcggcgtt cgccctgttt
    11401 ggcgataacg gtaacgttca ggcgcaccat cgggcggatg tcggcggcgt gtttgccgtc
    11461 cagacgggcg aggtaaacca tatcgtattc gcaggtcaaa ccggccatca cttgcacgat
    11521 gcgcggatcg gcggctttgg cgattgcttc cactttgttc aacagcgcga ctttggcggc
    11581 ggaatcgagg ccggcaatgg ggtcggacgc ggaacaaacc ggcttgccgc gcgtttcaga
    11641 cggcattttg gcggacacct tgccgcctgc cgccccaatc gcgcggacgg cgcgggcgga
    11701 acggtttatc gaatcgatgc acaggctgtc ggcgtaggca aaggcggttt tatcgcccga
    11761 aacggcgcgc acgcccacgc cctgattgat ttggaagctg cccgatttga cgatgccctc
    11821 ttccaaatgc cagctttcat aagcggtgcg ctggcagtag atgtcggcat aatcgacgtg
    11881 gtgcgcgccg atgatgcaca ggcttttggc gagcagttcg ggggaaaggc ggttggcttc
    11941 gagcagccgc tctcgtacgg cggaataggt aggatgcata gtgtcggcgc ataaaaaatc
    12001 aggggcttga ttatacggca tttg
//
LOCUS       DBBZYD010000063        11725 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.063, whole genome shotgun sequence.
ACCESSION   DBBZYD010000063 DBBZYD010000000
VERSION     DBBZYD010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11725
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.063"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            48..287
                     /locus_tag="ACJJDL_001423"
     CDS             48..287
                     /locus_tag="ACJJDL_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574123.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEELCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
     gene            501..1802
                     /gene="bioA"
                     /locus_tag="ACJJDL_001424"
     CDS             501..1802
                     /gene="bioA"
                     /locus_tag="ACJJDL_001424"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HGG7574124.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQMKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLRAKQNMATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNLTSRFDDEWDEADLQPVRALFEAHHTDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKCRLKTAWDIRGVKDVRVLGAIGVIELEKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1799..2446
                     /gene="bioD"
                     /locus_tag="ACJJDL_001425"
     CDS             1799..2446
                     /gene="bioD"
                     /locus_tag="ACJJDL_001425"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HGG7574125.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGVLAKQLLQQGKSVITQKPVQTGC
                     QNIADDIAVHRKIMGKPMQEADKQGLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLYSLVFNHIHDSRDAHIAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2461..2643
                     /locus_tag="ACJJDL_001426"
     CDS             2461..2643
                     /locus_tag="ACJJDL_001426"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574126.1"
                     /translation="MEHLYDEYGNTTPNRRTTNKKDETISSKVTVAAIPVAAPFAIAD
                     IVDQDFIQAIMKITGH"
     gene            2667..3053
                     /locus_tag="ACJJDL_001427"
     CDS             2667..3053
                     /locus_tag="ACJJDL_001427"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574127.1"
                     /translation="MKCYIKVVIIVFIMVMTTSCNPCFFATSSCDYSFRKNYPINSDD
                     EYYVKNNTSKETRIADLRYCISYACPEVYQKYQLPDENGDYREIIRRKYKDDYKKGYK
                     NADDVMTCYGKIGECMKNNKGYSTKW"
     gene            3047..3490
                     /locus_tag="ACJJDL_001428"
     CDS             3047..3490
                     /locus_tag="ACJJDL_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574128.1"
                     /translation="MVMFRLLSTALVLLIMQGCYYTTIDNEKCFVAPQSVHCPVSSDI
                     ENVIRKNPNKSINQVRSDIKYCANMYFSNIRELNIPQDFDNYIFMLKEKGIPRNDKEL
                     AYNAVRNMHIICLSSLGGYDYYQKTAEFQKIDYKKEMEKLLNENH"
     gene            3561..3944
                     /locus_tag="ACJJDL_001429"
     CDS             3561..3944
                     /locus_tag="ACJJDL_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574129.1"
                     /translation="MITRCFKVVIIVFIMVMTTSCNPCFFATSSCNYPFDDMTIRANN
                     DIEYFVKNNTTNEQRIDDFRSCLSVACPEIYKLYQLPDEKGNYQYIIKKYYDNKYNDN
                     AVKSTNCIGDNARCMLNNKGYSTKW"
     gene            3947..4423
                     /locus_tag="ACJJDL_001430"
     CDS             3947..4423
                     /locus_tag="ACJJDL_001430"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HGG7574130.1"
                     /translation="MGYGFEEWLPDLPAPVSDGIGLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            4453..5343
                     /gene="ubiA"
                     /locus_tag="ACJJDL_001431"
     CDS             4453..5343
                     /gene="ubiA"
                     /locus_tag="ACJJDL_001431"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HGG7574131.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVGKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            5528..5977
                     /gene="ptsN"
                     /locus_tag="ACJJDL_001432"
     CDS             5528..5977
                     /gene="ptsN"
                     /locus_tag="ACJJDL_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HGG7574132.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            5979..6941
                     /gene="hprK"
                     /locus_tag="ACJJDL_001433"
     CDS             5979..6941
                     /gene="hprK"
                     /locus_tag="ACJJDL_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HGG7574133.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            6922..7776
                     /gene="rapZ"
                     /locus_tag="ACJJDL_001434"
     CDS             6922..7776
                     /gene="rapZ"
                     /locus_tag="ACJJDL_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HGG7574134.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLPSR"
     gene            7857..8798
                     /gene="ylqF"
                     /locus_tag="ACJJDL_001435"
     CDS             7857..8798
                     /gene="ylqF"
                     /locus_tag="ACJJDL_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HGG7574135.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTCAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGKKPSEA"
     gene            8899..9501
                     /locus_tag="ACJJDL_001436"
     CDS             8899..9501
                     /locus_tag="ACJJDL_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HGG7574136.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            9685..11358
                     /gene="recN"
                     /locus_tag="ACJJDL_001437"
     CDS             9685..11358
                     /gene="recN"
                     /locus_tag="ACJJDL_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HGG7574137.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            11468..11544
                     /locus_tag="ACJJDL_001438"
     tRNA            11468..11544
                     /locus_tag="ACJJDL_001438"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11502..11504,aa:Arg,seq:acg)
     gene            11562..11636
                     /locus_tag="ACJJDL_001439"
     tRNA            11562..11636
                     /locus_tag="ACJJDL_001439"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11595..11597,aa:Glu,seq:ttc)
BASE COUNT         3027 a         2763 c         3047 g         2888 t
ORIGIN      
        1 agggctgtaa ccttcaatcg gaatttgttg cctgcgggat atgcggtatg aatgtttggg
       61 atatatgggg caggatggtg gaaatctatc ataagtataa gaagccgtgc ctggttttgg
      121 cggtggattt tgtgatgggt atggtattca tagagccgaa tgaggagctg tgcatcggta
      181 gatgctatgc gcctatgtcg gagtcccctg attttgctaa cgctgttgcg atggctgttg
      241 ctatgatctg tatcgtatgg attgccgttt tgtctatgac tgattgaagc gttgggcgga
      301 ggctgtgtga aacaatattg ggcgttgggt cgtctgattc caatcgggct tggggaatgc
      361 gaaacggtgt gcgcttatac tgcggacgat ttgttgcgtg gttttacgcc cgaaacggat
      421 ggaaaggtgt gggaagcggt ctgtcggagt agaatacgcg ttttgcgttt gaatgcagca
      481 ataagaaaag agagaaactt atgccgtctg aacatcaaca cacatcatca ttgcttgatt
      541 tcgaccgtac ccatctgctc catccctata cttccatgac cgatccgctt cccgtttatc
      601 ctgtcaaacg tgcagaaggg gtgtttatcg aattggcgga cggcacgcgg ctgattgacg
      661 ggatgtcgtc ttggtggtgt gcgatacacg gttacaatca tcccgttttg aatcaggcgg
      721 ttgagacgca gatgaaacag atgtcgcatg tgatgttcgg cggtttgacg catgagccgg
      781 cggtggagct gggcaaattg ttggtcggga ttttgccgca ggggctggat cgtatttttt
      841 atgcggattc gggttcggtt tcggtggaag tcgcgttgaa gatggcggtg caataccagc
      901 aggcgcgggg tttgcgtgca aaacaaaata tggcgacggt gcggcgcggg tatcacggcg
      961 atacttggaa cgcgatgtcc gtctgcgatc cggaaacggg gatgcaccat attttcggca
     1021 gcgcgttgcc gcagcgttat tttgtcgata acctgacaag ccgtttcgac gatgaatggg
     1081 acgaggcgga tttgcagcct gtccgcgcct tgtttgaagc gcatcatacg gacattgccg
     1141 cctttatttt ggaaccggtc gtgcagggcg cgggcggtat gtatttttat catccgcagt
     1201 atcttcgcgg attgcgcgat ttgtgcgacg agtttgatat cgttttgatt tttgatgaaa
     1261 tcgccaccgg attcgggcgc acgggcaaga tgtttgcctg cgaacacgcg gaggtcgtgc
     1321 cggatattat gtgcatcggc aagggtttga gcggcggcta tatgacgctg gcggcagcaa
     1381 tcacttcgca aaaagttacc gaaacgattt cgcgcggaga agcgggcgtg ttcatgcacg
     1441 gcccgacatt tatggcgaac ccgctggcgt gtgccgttgc ctgcgcttcg gtcaaactgc
     1501 ttttgtccca agattggcag gcaaatatcc gccgcatcga aagcatctta aaatgccgtc
     1561 tgaaaaccgc gtgggacatt cgtggtgtga aagacgtgcg cgttttgggc gccatcggcg
     1621 tgatcgagtt ggaaaaaggc gtggatatgg cgcgttttca agcggattgc gtggcgcagg
     1681 gcatttgggt gcgcccgttc ggcaggttgg tgtatctgat gccgccttac atcatttcag
     1741 acggcgtttt gaccaaactt gccgacaaaa ccgtgcaaat cttgaaggaa cacagcaaat
     1801 gaaaggcgtt tacttcgtca gcggcataga cacggacatc ggcaaaaccg tcgccaccgg
     1861 cgtgttggca aaacaattgt tgcagcaggg caaaagcgtg attacgcaaa agcccgtgca
     1921 aaccggttgc caaaacattg ccgacgacat cgccgtccat cgtaaaatca tgggtaaacc
     1981 catgcaggaa gccgacaaac aagggctgac catgcctgaa atcttcagtt atccagcttc
     2041 gcctcatctc gctgcccgtc ttgacggcag ggctttggac ttggacaaaa tccgcaccgc
     2101 cacacaagaa ttggcggcgc agtacgaagt cgttttggtc gaaggcgcgg gcggattgat
     2161 ggttccgctg acggaaaacc tgttaaccat tgattatatc cgtcagcaag gctatcccgt
     2221 catcctcgtt accagcggac ggcttggcag tatcaaccac actttactca gtttcgcagc
     2281 gctcaaacaa tacggcattc gcttgtacag cctcgtgttc aaccacatcc acgacagccg
     2341 cgacgcacac atcgcccaag acagcctgag ctacttgaaa tgccgtctga aagccgattt
     2401 ttccgaagcg gaatggatgg agttggcaaa aacagacgcg gtataaagat tgggaaaaat
     2461 atggaacacc tatatgatga atatggaaat acaacgccaa atagaagaac aacaaataaa
     2521 aaagatgaaa ctatttcaag taaagtaact gttgcagcga taccagtagc cgctccattt
     2581 gctattgctg atatagtcga tcaggatttt atccaagcga ttatgaaaat tactggtcat
     2641 tgattatcta tatattggtg gttgttatga aatgctatat taaagttgtc attattgttt
     2701 ttataatggt aatgacaact tcttgtaatc cttgcttttt tgcaacttct tcttgtgatt
     2761 attcttttag aaaaaactat cctataaata gcgacgatga atattatgtt aagaataata
     2821 cgagcaaaga aacaagaatt gcggatttac gctattgtat ttcttatgca tgtccagaag
     2881 tttatcaaaa atatcaacta ccagatgaaa atggagatta tagggagatt attcgtagaa
     2941 aatataaaga tgattataaa aagggctata agaatgcaga tgatgtcatg acatgctacg
     3001 gaaagattgg agaatgcatg aaaaataata aaggatattc aacaaaatgg taatgttccg
     3061 cttattatca acagcccttg tattgttgat aatgcagggc tgttattaca caactattga
     3121 taatgaaaaa tgctttgttg ccccacaaag cgttcattgt cctgtaagtt ctgatattga
     3181 aaatgttatt agaaaaaatc ctaataaaag cataaatcaa gttaggagtg atattaaata
     3241 ttgtgctaat atgtattttt ccaatatacg ggaattaaat attccgcaag attttgataa
     3301 ttacattttc atgcttaaag aaaaaggtat tccaagaaat gataaggaat tggcttataa
     3361 tgcagttaga aatatgcaca ttatttgttt gagttctttg ggtggttatg attattatca
     3421 aaaaaccgca gaatttcaga aaatagatta taaaaaagaa atggagaaat tgttaaatga
     3481 aaaccattaa atttgctatt gccgatatag ttgatagcga ctttatccaa gtgattatga
     3541 aattaagcgg gcattgattt atgattacgc gttgttttaa agttgtcatt attgttttta
     3601 taatggtaat gacaacttct tgtaatcctt gcttttttgc aacttcgtct tgtaattatc
     3661 cttttgatga tatgacgata agagcaaaca acgatattga atattttgtt aaaaataata
     3721 cgactaacga acaacgaatt gatgatttca gaagttgcct ttccgttgct tgtcctgaaa
     3781 tatataaatt atatcaatta cctgatgaaa agggtaatta tcaatatatt ataaaaaaat
     3841 attatgataa taaatacaat gataatgcag tcaaatcgac aaattgtatt ggggataatg
     3901 caagatgtat gcttaataat aaaggatatt caacaaaatg gtaataatgg gttacggctt
     3961 tgaggaatgg ctgcccgacc tgcccgcccc tgtttcagac ggcatcggcc tgccgatgag
     4021 ccggttattg aaagcccggt cgctgaccgc cgcattgcgc gccttgccgc atacattttc
     4081 ggtggaactg ctgaaactgg gcgaattgga gacggaatgc ggagggaggc tggtgcgcga
     4141 agttttgttg aagctggacg gtatccctgt tgtcgcggca aggagcgagt gccgtatcgg
     4201 ttcggcgttt tggcaaaaca ttttggactg cggcacgcgt cctttgggcg agcgtctgtt
     4261 tcaagccgat ttggaagggg cgcgttcggc gtttgagttt gccgtttccg gcgaaggatg
     4321 cggacggtac tttgccgcgc ggcgttctcg gttttcccgt cacggcgagg aaatgctgct
     4381 gaccgagtat tttctgcccg aactgaaacg ctttatcgga taaaataccg ttttttcaag
     4441 ctgtgcggca atatgaatcc taaatcccct ttatttttac gactgtccga tcgtttggat
     4501 gtgtacctgc gcctgatgcg ggcggacaag cccattggga cgctgctttt gctgtggccg
     4561 acctactggg cattgtggct ggcttcagac ggcattcccg atttggcggt attggcggcg
     4621 tttacaatcg gcacgttttt aatgcggagt gccggttgcg tcatcaacga ttttgccgac
     4681 cgcgattttg acggtgctgt cgagcgcacc aaaaaccgtc cgttcgcaca gggtcgggtc
     4741 ggaaaaaaag aagcgctgct gctgacggca tttttgtgcc tgcttgccgc attgtgcctg
     4801 attccgctga atcatctgac atggctgatg agcctgcccg cgctgtttct tgcgctgact
     4861 tacccgttta ccaaacgctt ttttccgatt ccccaactct atctcgggct tgccttttcc
     4921 ttcggtatcc cgatggcgtt tgccgccgtt gccggaaacg tgccgcctca agcgtggata
     4981 ctctttgccg ccaatgtgtt atggactctg gcgtatgaca cggtttatgc aatggcggac
     5041 aaagaagacg atttgaaaat cggcatcaaa acctccgccg tcacgttcgg gcgttacgac
     5101 atcgccgccg ttatgctgtg tcatggcggc tttaccctgc tgatggcagt attgggtgcg
     5161 gttatcggtg cggcatgggc atattggacg gcaatcccca tcgtcctgct gctgcaatac
     5221 cgccaatatg ccgccatcaa aagccgcgtc cggcaaatct gttttgaaac gtttttggca
     5281 aacaacagaa ttggttgggt gtggtttacc gccatttttg cccatacgtt tttcgcgaaa
     5341 taaggcaggg caatgccgtc tgaagagccg taaactgctt tggacggcat ttctatctgt
     5401 gccgaaaagc gttaaaatat gtttttaaaa cgctgtgtta tgtcagcccg taccgtatgc
     5461 gggattgaga tttgccctag cagtcggtac aatctttctg ttttgcgatg tctgaaaaga
     5521 gaagcttatg agccttatcg gcgaaatttt gcctttgtcc catattgttt tggatatgga
     5581 ggtgggcagt aaaaaaaggc tgtttgagga agcgggcctg cttttggaac gcgaatcctc
     5641 attgtcccat gctgatgttt tcgaatgtct ttttgcccgt gaaaaactcg gttcgaccgg
     5701 tttggggcag ggcgttgcca tcccgcacgg ccgtcatgcc ggcgtgaagc aggcgacggg
     5761 cgcgttcatc cgcacgcgcg aacccgtcgg atttgacgca ccggacggca agccggtttc
     5821 cctgattttt atcttgctgg tgccggaaaa cgcaactggc gaacatttgg aagtcttatc
     5881 caaactggcc ggcaagtttt cccaaaaaag catccgcgaa tcgctgatga cggtttcttc
     5941 tgcggaagaa gcccgcgcca ttttgactga agaataatat gcccagtatt tccgtccgcc
     6001 gactgtttga cgacaaccaa tacaagttac aacttgcctg ggccgccggc aattcgggtg
     6061 cggacaaccg tatcggcgta gaggcggaca agcccgtcct cgctttggtc ggacacctga
     6121 atttcatcca ccccaaccaa atccaagtgg tcggtttggc ggaatcggaa tatctgaacc
     6181 gtctcgaatc gggggaaacg ggttatcagt tcggcgacct gttcgacatt tctatgtctt
     6241 tggttattgt ggcaaacggc ttgccggttt ccccggggct gcgcgactat tgccataaaa
     6301 acgatattcc actgctgact tccaaactcg aaagccccta tctgatggac gtgttgcgga
     6361 tttacctgca acgcaccctg gcggcatcgt ccgtcaaaca cggcgtattt ctcgatgtgt
     6421 ttgaaatcgg cgtgctgatt accggacatt ccggcttggg caagagcgaa ttggcgttgg
     6481 aactgatttc gcgcggccac agcctgattg ccgacgatgc ggtcgagctg ttccgcatcg
     6541 gtccggaaac attggaaggg cgttgttcgc ctatgctgcg tgattttttg gaagtgcgcg
     6601 gcttggggat actcaatatc cgccatattt tcggcgaaac ttccatccgc cccaaaaaaa
     6661 tcctgcaact cattatcaat ttggtcgagg cagacgacga gtatatgaag cagctcgacc
     6721 ggttgagtat ccgcaccgaa accgaatcca tcctcaacgt caacgtccgt tcggttacgc
     6781 tgcccgtcgc cgtcggacgc aacctcgccg ttttggttga ggcggcggta cgcaattaca
     6841 ttttgcagtt gcgcggtaag gacagtacgc gcgaattttt ggaacgccat cagacgcaac
     6901 ttaaagaaaa cgaacagaat catgaaaatc gtcctgatta gcgggttgtc cggttcgggc
     6961 aaatccgtcg cactgcgcca aatggaagat tcgggttatt tctgcgtgga caacctgccc
     7021 ttggaaatgt tgcccgcgct ggtgtcgtat catatcgagc gtgcggacga aaccgaattg
     7081 gcggtcagcg tcgatgtacg ttccggcatt gacatcggac aggcgcggga acagattgcc
     7141 tctctgcgcg gactggggca cagggttgaa gttttgtttg tcgaggcgga agaaagcgtg
     7201 ttggtccgcc ggttttccga aaccaggcga ggacatcctc tgagcaatca ggatatgacc
     7261 ctgttggaaa gcttaaagaa agaacgggaa tggctgttcc cgcttaaaga aatcgcctat
     7321 tgtatcgaca cttccaagat gaatgcccaa cagctccgcc atgcagtccg gcagtggctg
     7381 aaggtcgaac gtaccgggct gctggtgatt ttggagtcct tcgggttcaa atacggtgtg
     7441 ccgaacaacg cggattttat gttcgatatg cgcagtctgc ccaacccgta ttacgatccc
     7501 gagttgaggc cttacaccgg tatggacaag cccgtttggg attatttgga cggacagccg
     7561 cttgtgcagg aaatggttga cgacatcgaa aggtttgtta cgcattggtt accgcgtttg
     7621 gaggatgaaa gcaggagcta cgttaccgtc gccatcggtt gcacgggagg acagcaccgt
     7681 tcggtctata ttgtcgaaaa actcgcccga aggttgaaag ggcgttatga attgctgata
     7741 cggcacagac aggcgcaaaa cctgccgagc cgctaatccc gttgaacgat gatgccgtct
     7801 gaaacccgat tttctgtttc agacggcatt tcaaatattg agaagaaagg aaagacatgg
     7861 caatccaatg gtttcccggc catatgaaca aagcgaaaaa agccatcgcc gagcgcgcca
     7921 aaagcgtaga catggtgatt gaaatgctgg atgcgcgaat gcccgcctcc agcgaaaacc
     7981 ccctgcttgc ccagctttcc aaaggcaaac ccaaacttaa aatcctaaac aaacaagatc
     8041 ttgccgaccc cgaacgcaca aaggtctggc ttgaccacta caacagccgc cccgacacgt
     8101 gcgccattgc cctcgattcc tccgaaaccg gcgcacacgg caaaatcacc caagcctgcc
     8161 gcgcgatgat tccccatcgg caaggcatag acaaaccctt gcgcgtcttg atttgcggca
     8221 ttcccaacgt cggcaaatcc accctcatca acggcatgat aggcaaaaaa tccgccaaaa
     8281 ccggcaacga acccggcatc accaaagccg aacaacgcct tttccttgcc gacgacttct
     8341 ggctgtacga cacccccgga atgctgtggc cgaaaatcat tgtcgaagaa agcggctaca
     8401 acctcgccgc cggcggcgca gtcggacgca acgcattgga cgaagaagaa gtcgccctcg
     8461 aacttttaga ctacctccgc cgccactacc tccctatgtt gcaagaacgc taccaagccg
     8521 acaaagaccc cagcagccac tgggacgaaa acgtttggct cgaatggata gccaaaaaac
     8581 gcggcgcagt cctcagcggc ggacggatca actaccaaaa agccgccgaa aacatcctca
     8641 ccgacttccg tgaaggcaaa atcggcagaa tcaccctcga aacgccgaac caatgggaaa
     8701 cttggctcaa aaaagcccgt cagaaagaag ccgaactcaa agccatacgc gaagccagaa
     8761 aagcagagcg taaagggaag aagccttcgg aagcataaag aatgccgtct gaaaaatatt
     8821 tttcaggcag cttctctcta ctccaaccga tttcagacgg catatccaaa cccatgccgt
     8881 ttcagcacgg atacccgtat gaccgacaaa atttctcccg acgcgctgat tgaagccgca
     8941 ctgctgaccc aaaccgaacc gctgaccgaa aaatctatgc gcgaattgtg tgtgccgcca
     9001 ctgtcgcagg acaaactgat tgatgtgttg gcgcagttga aaacgcgttg gcaggatagg
     9061 gcgttgcaac tggtgcatac gcaagagggc tggcgttttc agattgttca gacggcattc
     9121 gagcggctgg gcagcctgca agaacagcgt gcgccgcgct actcccgcgc cgtgatggaa
     9181 acactggcga ttatcgccta ccagcagccc gtaacgcgcg gcgacatcga aggcatacgc
     9241 ggtgtggcgg tgtcgcagaa cgtgatgcag accttgcagg atcgggggtg gattgaagtc
     9301 atcggacatc gggacacatt gggaaaaccc gcattgtggg cgacaacggc aacttttctc
     9361 agcgatttgc gcttggacgg tctggaagaa cttccgccgc tgaccgaact gggcgaactg
     9421 gttttacccg atttaatgga aatgccgcct acggatgaag aagagccgga agccgtaccg
     9481 tccgataccc tgcccaactg aaattccaaa tgccgtctga aacgcacatt gcttcagacg
     9541 gcatttcaac aaataagcag ataaaaacaa gcactaagca aaattaagga aaaacttatt
     9601 tttaatttaa aaaatcttag ttataattcg tatatctaaa gttgatattg cttttgtcgg
     9661 tagaattgct aaggaatcct cacgatgctt ctaacacttt ctttgcgtga ttttgtcatt
     9721 gtcgaaaatc tgaatctgga ttttcaaagc ggctttaccg tattgaccgg agaaactggc
     9781 gcgggcaagt ccattacttt ggatgcgatt ggtctgctgt tgggcgataa agccgattac
     9841 agccaagtcc gcagcggcgc aaaagaagcg cagttgtcgg cgttgtttga tatttcccat
     9901 ttacctgttt taaaagcaga attgtatgaa caggggcttt taaacgacgg agaagaagaa
     9961 ctcagtatcc gccgcattat cgatgccaaa ggcaaaagcc gcagctttat caacaatcag
    10021 gccgctacct tggcgcaact caaagccgtc ggcagccagc ttatcgacat ccatgggcaa
    10081 aacgcccatc attcgcttaa tcaggaagcc gcccagcgcg aattgttgga cgcatttgcg
    10141 ggcagcaggg cgcaggcgga aaccgtcagg cagctttatc aaaactgggc aaactcaaaa
    10201 aaagcattgc aggaagcgca ggaacaggca gaaaacattg cactcgaaca agagcgtctg
    10261 gaatggcagt ttaacgaatt gaatcagttg gacattaaac aaggcgaatg ggaagccctc
    10321 agccaaagcc acgacagcct tgcccattct gccgagctgt tgcaggctgc cgaagaagtc
    10381 ggaagcaaga ttgacggcga caacggcatc caacgccata tctatcaatg tcaaaaacta
    10441 ttggccaatc tgcaaaacat cgagccgcgc tttgccgaga gcctgaatat gttggcaagc
    10501 atcgaagccg aattgggcga aatcagtgcc aatatgcgcg atgtggcagg tcgcagcgac
    10561 atcaatccca acgaacttgc cgcacaagag cagcgtatgg gcgagctgat ggggatggcg
    10621 cggaaatacc ggatcgagcc tgaagagttg cctgccaagt tggcagaaat cgaagaacgc
    10681 ctgcaaagcc tgcaagctgc cgccgatttg gacgcgctcg agcataatgt tgcccacaat
    10741 tttgccgaat atcaggaagc tgcccacatc ctttctgcca tgcgccatca ggcggcagag
    10801 cgtttgagcg gcgaaacgac cgagcatatg caacaccttg ccatgaaagg tgcacgtttc
    10861 gacatcgtcc tgttgccctc gtcgccgacg gcacacggtt tggagcaggt tcaatttcaa
    10921 gttgccgcca acaaaggcaa tccgccccgt ccgctgaata aagttgcctc cggcggcgaa
    10981 ttggcgcgta tcagccttgc cttacaggtt gttgccagcc aatataccca agttcccacc
    11041 ctgatttttg atgaggtcga taccggtatt ggagggggag tggctgaaat ggtcggcaag
    11101 gcattacgtg cgttgggcag aaaacatcag gtgcttgccg ttacccatct tccgcaagtc
    11161 gcatcctgcg gcgaaaacca ctggcgagtg cgcaagcaca gcgagggaga gcaaaccgtc
    11221 agcgaaatca gtatattgga tgaaatccaa cgggtcgaag aggttgcccg tatgttgggc
    11281 ggagaagtca ttaccgatac gacgcggcaa catgcggcag aattgctgca acttgcgtcg
    11341 aaaaatagtt tattttaaaa tcaatcagtt aaaaaataac taaaaataaa agtctaaaac
    11401 aatagacaga actcagataa atccgtatta ttacgctttc ttaatcactt gaacaagtga
    11461 ttgtgctgca cccgtagctc agttggatag agtatctggc tacgaaccag agggtcgggc
    11521 gttcgaatcg ctccgggtgc gccagtaaga aaatacaata cgcgcccatc gtctagcggt
    11581 taggacatcg ccctttcacg gcggtaaccg gggttcgatt ccccgtgggc gtgccaattc
    11641 aaaatgcctc cgattatatc ggaggcattt ctcatttctc atttctcatt tctcatttct
    11701 catttctcat ttctcatttc tcata
//
LOCUS       DBBZYD010000064        11607 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.064, whole genome shotgun sequence.
ACCESSION   DBBZYD010000064 DBBZYD010000000
VERSION     DBBZYD010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.064"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(171..863)
                     /locus_tag="ACJJDL_001440"
                     /pseudo
     CDS             complement(171..863)
                     /locus_tag="ACJJDL_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
     gene            complement(971..2164)
                     /locus_tag="ACJJDL_001441"
     CDS             complement(971..2164)
                     /locus_tag="ACJJDL_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG7574138.1"
                     /translation="MSDQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2293..3030)
                     /gene="pxpA"
                     /locus_tag="ACJJDL_001442"
     CDS             complement(2293..3030)
                     /gene="pxpA"
                     /locus_tag="ACJJDL_001442"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HGG7574139.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGRVKAVNGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3017..3946)
                     /locus_tag="ACJJDL_001443"
     CDS             complement(3017..3946)
                     /locus_tag="ACJJDL_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HGG7574140.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3943..4590)
                     /gene="pxpB"
                     /locus_tag="ACJJDL_001444"
     CDS             complement(3943..4590)
                     /gene="pxpB"
                     /locus_tag="ACJJDL_001444"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HGG7574141.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4774..6981
                     /gene="uvrD"
                     /locus_tag="ACJJDL_001445"
     CDS             4774..6981
                     /gene="uvrD"
                     /locus_tag="ACJJDL_001445"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HGG7574142.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FILDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASQEQGVSLWQAACNAGAK
                     AAKVAAFVRLIEALRNQVGQMPLPEIIAGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPDNISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEEM"
     gene            7338..7877
                     /locus_tag="ACJJDL_001446"
     CDS             7338..7877
                     /locus_tag="ACJJDL_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7574143.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYQEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAENHVQICEVSGIGFEKEGSLCGETGQK
                     LWLEEWEYPPIGVYFANDPSGGHAMFALDYRACGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8067..8282)
                     /locus_tag="ACJJDL_001447"
     CDS             complement(8067..8282)
                     /locus_tag="ACJJDL_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574144.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8406..8765)
                     /locus_tag="ACJJDL_001448"
     CDS             complement(8406..8765)
                     /locus_tag="ACJJDL_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HGG7574145.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8818..9194
                     /locus_tag="ACJJDL_001449"
                     /pseudo
     CDS             8818..9194
                     /locus_tag="ACJJDL_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            9393..10013
                     /locus_tag="ACJJDL_001450"
     CDS             9393..10013
                     /locus_tag="ACJJDL_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HGG7574146.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGILYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            10036..11487
                     /locus_tag="ACJJDL_001451"
     CDS             10036..11487
                     /locus_tag="ACJJDL_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HGG7574147.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
BASE COUNT         2843 a         3071 c         2845 g         2848 t
ORIGIN      
        1 tttcagttac agcagcttga tccctttccc ttatccaacg ggggaaggct aggatagggt
       61 ggcttgcaaa tatacagaac aagggacaag agccaccctc tctccaaccc tctccctccg
      121 tacgggaggg ggtggattct cgcgggcgaa gcccacgcta cggttagcct ttaccccagc
      181 acaaacaatt cccgcccgtg cgccttcagc caacttttag cattgtcggt atgcggcgtc
      241 agcgtgttca ccaaatgcca aaagcgcgga ctgtggtcgg ggtggcggag gtggcagagt
      301 tcgtggatgc agacatagtc ggcaacgtac ttgggcgcgc cgatcagccg ccagttgagg
      361 cggatgccgg tgtgcgggcg gcatacgccc caaaaggttt tggcgttgct caggtctgtg
      421 gcggtgggcg tcagtcctgt ttcggctgcg tgtttttcaa ggcggggcag caggtattcg
      481 cgggcgcgtt cgttcaacag gcggcgcagg tggtcgattt gtgcggcggt ttattttcgg
      541 ggaagcagga tttcagacga cgtgatacgg atatggcttt ggctgtgggt atccagcttg
      601 gtctttattc cccgatacca aatccactcg ggtaagtttg ggtgggaaac aggatgcacg
      661 ggcgttttgg caagcgtgtt ccgcaaaatc gtttcgtttg ccgccagcca gtttgctaac
      721 gcgtggtctt gaaaaaaggg tgggacgttg atgctgaccg tctgcatatt gacggggcgc
      781 agaatcagat ttttcttggc actgcgtttg agttcgattt cgatgcacaa gccgtcggaa
      841 agagtatagg tgaagcgttt catagttgtg aataggtttc agaccggata catcgtctga
      901 aacaggaatt ttccatatca ggcggcaaac ttcggataat atacaaaatc aaacatctgc
      961 gctacaaggt tcagccgaac aagccgccga tatatttgct gatggtgatg gcgctgagta
     1021 ctgccatcaa accgaccaca atcacgccgg aaacggtgag ccacagcggg tgtttgtagt
     1081 cgccgacaat tttggttttg taggcggcaa tcagaatcag accgagggaa atcggtaaaa
     1141 tcaggccgtt taatgcgcct acgaacacca gcacctgcgc cggtttgccg atggtggaaa
     1201 atacggcggt ggacacggcg ataaaggcaa taatccattt gtttttattg cgttcgatag
     1261 acgggctgag accggagaag aacgacaccg aagtataagc cgcaccaatc accgaagtaa
     1321 tcgaagccgc ccaaatcacc acgccgaaaa tcagcaggcc gatgtatccc gccgcatatt
     1381 caaacggtgt ggaagcaggg ttgtcgggat tgagctgtac gccttggctg accacgccca
     1441 aaaccgccaa aaacaataca atccgcataa tcgaggcaat caggatcgcc cgcaccgagc
     1501 tttggctcac ttccggcaac gccgatttgc ctttgatgcc tgcgtccagc agacggtgcg
     1561 caccggcgaa ggtgatgtag ccgccgaccg tgccgcccac cagtgtaaca atcgccattg
     1621 catcgagttt ttccggcata aaggtatgca cggcggcatc tgccagcggc ggattcgcct
     1681 gccatgccac ataaaccgtc agcgcaatca ttacgaaacc catcacttgg gcgaatttgt
     1741 ccatcacttt gcctgcttct ttaaacagaa acacaccgat ggcaatcacg ccgctgatca
     1801 cggcaccggt ttccggcgac agtccggtca gcaggttcag acccaagcct gcgccgccga
     1861 cgttgccaat attgaacgcc aaaccgccca tcacaatcag cacagccaag aaatagcctg
     1921 cgccgggcaa gacctgattg gcaatatcct gcgcctgttt ttcggaaacg gcgacaatcc
     1981 gccaaatatt gagctgcgcc ccgatgtcga gcagaatcga gagcagaatc acaaagccga
     2041 aacttgccgc cagtgcttgg gtgaaggtgg cggtttgggt cagaaagccc gggccgatgg
     2101 cggaagtcgc catcaggaat gcagcgccga ttaaggcatt tctgcggttt ttttgatcag
     2161 acataatcgc ttatcctcta taaaattggt tgttgctgtg tttgggcgaa acctgcggtt
     2221 ttagctacgc agaaactcgc tttgctcgtt ttggcgaaac ctgcggtttt cagacggcct
     2281 atgaactgtt tttcaagcag aaactttgat gcctgccgcc agtagttcct gccggatttt
     2341 ttcggcaaac accacggcgt gcggcccgtc tccgtgcaga cagatgctgt cggcttgcac
     2401 ggcaaccagg ctgccgttca ctgctttgac ccgcccgtcc cgcaccatct gcaatacttg
     2461 ggcgatggct tcttcgtcgc tgtcaacctg cgcatcgggg cggctgcggg gaaccagcgt
     2521 accgtcgggc atatagcggc ggtcggcgaa tacttcggaa atcacaccca agcctgcggc
     2581 ttttccggct tccaagagca ggctgccgga aagtgccatc aatttcaatt tcgggtcgaa
     2641 atccgccaca attcgggcaa cggtatccgc cagcgcacgg tttttcgccg cttggttgta
     2701 cattgcgccg tgcggtttga cataagccat ttccaaaccc tgatcacggc acaaggcctg
     2761 caatgcgccc aactggtaat tcagacacgc ccgcaaatcg gcttcggaca gattcatttc
     2821 ggtacggccg aagttttccc gatcgggata gccggggtgt gctccgatgc gcacgccgtt
     2881 ttgttgggca tacgccaatg ccgcccgaat atcggcaatg ctgccggcgt gttgggcgca
     2941 ggcgatgttg gccgaagtaa tcagctgcaa caaggcttcg tcgctgccgc agccttcggc
     3001 gagatcggcg tttaaatcaa cctgcttcat gggtgattct ccgtatttgg ttcagatagg
     3061 cttggttttt gcgccgcagg gcggtggctt ctttcaagcc gattattttg aatttgactt
     3121 tgctgccgaa gcgcacctgt gccagcctgc ccaaatcggc ggcggcaacg gtagcgattt
     3181 tcggataacc gccggtggtt tgtgcatcgg ccagcaggat aatcggtttg ccgccgggcg
     3241 gcacctgcac ggttcctgcc tgaacagcgt gggacagcat ttccaaaggt tgcgacaggg
     3301 tcagcggctg tccgtcgaag cggtagccca tgcggttgct atcgctttgc agcgtccacg
     3361 tttcccgttc cagattcaga cgcccttttt cactgaaagc ggcatattcc gacgaaggaa
     3421 caaggtggac ggtatcggta aacggtatcg gggcaatgcc gactttggac aattcctgcg
     3481 cacctttgcc gatggggaga taatcgcctt tttgcagcat tctgccctga tggccgccga
     3541 aaccggcttt caggtcggta cttctcgaac ccatcacttc cggcacatca aatccgcccg
     3601 ccacgcacac atagccgtac atgccctgca cggcacgcac cattttcaag gtctgccctt
     3661 tgcgggcggt ataacgccaa tacgaataga ccggttcgcc gtccaattcc gcctgataca
     3721 cggcaccggt gagacaaaac ggcgtatccc gttcaaacac cagcattatc ccgcccaaag
     3781 cgatttcgat tgcggccgtg ccttcgtcgt tgcccaataa aatattaccc gccgccaaag
     3841 caaccgtgtc catcgcaccg gcatgaccga tgccgtaacg ccggtgtccg tagcgtccgg
     3901 tatcctgaat atgcgccggt gcctgcactg ccgaaacgtg aatcatggct caatcctttc
     3961 tgcaacaaag cggacttggt cacccgccgc cagcagggtc ggcggattca aatcggctcg
     4021 gaacaagggt aattcggttc tgccgataat ctgccagccg ccgggcgaag cgaacggata
     4081 cacaccggtc tgactgccgc cgataccgac cgaaccggca ggaacggacg ttctcggcac
     4141 ggcacggcgg ggcgtgtgca atgcttcggg caagccgccc agataaggga aaccgggctg
     4201 gaagcccatc ataaatacgg tataagtttg cgccgtatgg cggcggacga tttcggaaat
     4261 aaccgtctga tggaaagcag cgacttccgc caaatccggg ccgtattcgc cgccgtagca
     4321 gacgggaatt tccaccagtt tgccctgatg gtctgtaacg gcggtgtgtt cccacacata
     4381 ttgcaattca tcggcaagcg tcgccaaatc ggtatcgaaa cgggtaaaca cggtcagatt
     4441 gttcatgccg accaccactt cctcaatcct gtcgtgctgc ccgagcgcag cggcaaacgc
     4501 ccacaacttt tgctgtttgc ccagttcgga aggcgcattc agtcggcaga ccaaagcgga
     4561 ttcgctgatt ggtgtgatct ctattctcat ttgttgttca ttttggttat gttttaatga
     4621 atctatatgc aggggcggcg gtttgtcaat atcttctgtg ctgcatcatc aaaccgtcga
     4681 ttggaaaagt gctgccctgc cgctgcactt tttcagacga ccttaaaccg tttctattaa
     4741 aatagcgcat tccacttttc agacggcatc cttatgtttc ccgaccaatc cgcccccaac
     4801 ctgctgcaag gcttgaatcc cgaacaactc tccgccgtaa cctggccgcc gcaatccgca
     4861 cttgtgctgg cgggcgcggg cagcggcaaa acgcgcgtgc tgaccacgcg catcgcatgg
     4921 ctgttgcaaa ccggtcaggc aagcgtgcac agcattatgg cggtaacgtt taccaacaaa
     4981 gccgccaaag aaatgcaaac ccgtttgggc gcgatgattc ccatcaatgt ccgcgccatg
     5041 tggctcggca cgttccacgg cctctgccac cgctttttgc gcctgcacca ccgcgacgcc
     5101 ggtctgccgt cttcctttca aatcctcgac ggcggcgacc agctttccct catcaaacgc
     5161 ctgctcaaaa gcctcaacat cgccgaagaa atcatcgcgc cgcgttcgct gcaaggcttt
     5221 atcaacgcgc aaaaagaatc cggtttgcgc gcttccgtct tgagtgcgcc cgatccgcac
     5281 acaagccgca tgattgaatg ctacgccgaa tacgacaaaa tctgccaacg cgaaggcgtg
     5341 gtcgattttg ccgaactcat gctccgcagc tacgaaatgc tgcaaagcaa cgaaatcctg
     5401 cgccagcatt accaaaaccg cttcaaccac attctcgtcg acgagttcca agacaccaac
     5461 aaactgcaat acgcctggct caaactcatg gcgggcggaa acgcagcggt atttgccgtc
     5521 ggcgacgacg accaaagcat ttaccgtttc cgtggcgcaa acgtcggcaa catgaccgcg
     5581 ctgatggaag aattccacat cgacgcgccc gtcaaactcg aacaaaacta ccgctccgtc
     5641 ggcaacatcc ttgccgccgc caatgccgtg attgaaaaca acgacgaacg actcggcaaa
     5701 aacctgcgca ccgacgccga agcaggcgac aaaatccgct actactccgc ctttaccgac
     5761 ctcgaagaag cccggttcat cttggacgaa accaaagccc tcgaacgcga aggctgggat
     5821 ttggacgaaa tcgccgtcct ctaccgtagc aacgcccaat cccgcgttat cgaacaaagc
     5881 ctgttccgca gcggcatccc ctacaaaatc tacggcggct tgcgctttta cgaacgccaa
     5941 gaaatcaaac acgcgcttgc ctatctgcgc ctcgccgtca atcccgacga cgacaacgcc
     6001 ctcttgcgcg tgattaactt cccaccgcgc ggcatcggcg cacgcaccgt cgaaaacctt
     6061 cagacggcat cgcaagagca aggcgtttca ctttggcagg cagcctgcaa tgccggcgca
     6121 aaagccgcca aagtcgccgc cttcgtccgc ctcattgaag ccctgcgcaa ccaagtcgga
     6181 caaatgcccc tgcccgaaat catcgccggc atcctcaaag acagtggctt gaccgaacac
     6241 taccgcaccc aaaaaggcga caaccaagac cgcctcgaca accttgacga actcgtcaac
     6301 gccgccatcg agttcaaacc cgaagacagc aactttgaaa ccctgcccga caacatttca
     6361 gacgaccccg ccttccccat cctcgctttc ttgagcaacg ccgccctcga atccggcgaa
     6421 aaccaagcag gcgcaggcga aaaagccgtc caactgatga ccgtccacgc cgccaaaggc
     6481 ttggaattca acgccgtctt cctcaccggc atggaagaag gccgcttccc cagcgaaatg
     6541 agccttgccg aacgcggcgg cctcgaagaa gaacgccgcc tcatgtacgt cgccatcacc
     6601 cgcgcccgca aacgcctcta catcaccatg gcgcaacaac gcatgctgca cggacaaacc
     6661 caattcggca tcgtctcccg cttcgtcgaa gagatcccac ccgaagtatt gcactacctg
     6721 tccgtcaaaa agaccgccta cgacagctac ggcagcccgc gccaaaccgc cgcatccaaa
     6781 gacaaaatca tcgacgacta caaacagccc caaacctacg caggtttccg tatcggacaa
     6841 aacgtccgcc acgccaaatt tggcaccggc gtgattatcg atgccgcaga taaaggcgaa
     6901 tccgcccgac tgaccatcaa tttcggcaaa cagggcgtga aagagttgga caccaagttt
     6961 gcgaaattgg aagagatgta aatttgaaat gcaggctgga tactcgtatc cgacaaaaat
     7021 atttgacgcg tctatcgttt ccgaaaaacc gctgttggaa aatgtcggat tcgagaatcc
     7081 gacctatggc aaaaaactgt agcaaggaca aggcaaaagg ccgtctgaat ccggtaacaa
     7141 caaattttgc cgaaacctcc gccgtcattc ccgcgcaggc gggaatccag acctttcggc
     7201 acggaaactt atcggataaa aggtttcttt agattccacg ttctagattc ccgcctgcgc
     7261 gggaatgacg gacggtaaaa gccgggtata gatacctaac ccttgtttat agctgaaaat
     7321 caataaggaa gaacattatg tcccaagttt ttaaagattt tgatttgtcc tccgtatggg
     7381 aatccgacag ttgggcagat gaaaactacc aagaagcccc gtttacccct gaaattttgg
     7441 ctgccgtaga aagtgaactg ggctataaat tgccgcaaag ttttattgaa ttgatggcgg
     7501 tacaaaacgg cggaatattt gtcaaaaact gttttccgac cacgcagaga aattcgtggg
     7561 cggaaaatca tgtgcaaatt tgcgaggtat cgggcatcgg ctttgaaaaa gaagggagtt
     7621 tgtgcggcga aacagggcaa aaactttggc tggaagaatg ggaatatccg cccatcggcg
     7681 tgtattttgc caacgacccg tcaggcggtc atgccatgtt tgccttggac tatcgggcgt
     7741 gcggcaaaga cggcgagccg aaagtggtgt ttgtcgagca agaatcggat tttgaaatcg
     7801 tcgaacttgc ccccgatttt gaaaccttta tccgcagctt gcggcatgaa gatgagttta
     7861 ttgacgagga aatataaaac ggcggttgaa aaaccggaat catcaaggga aaacgggcga
     7921 aataacggat aatcgcttga atccgtaagg aaaacggttt ggtggaacgc gccatccaag
     7981 acctttgcaa agaaaaactg tctccgacag cattgacatt attaacagaa cttatcaagt
     8041 ttggagctat ctcaaatata attcggttat ccttttgtat ccattaaatc atatgcttca
     8101 attaattgtt gttctagctc ttgtaccaat tttgaattgc gaattcctga cacaatctca
     8161 aattcttctg catctatgca aacacctgca taaatttcaa taacaaggga acgcaataat
     8221 tgaagctctt ctcttgttaa agaaataata atgtcatcac ctgtgtaatt gattatattc
     8281 ataataattt tatttttgtt tgtcaaagta agttttgcct aaggttggtc taaatgcagt
     8341 tccaccatct tttgaatttg ggtctctgat tacaattgct ccagacttat catcccaaat
     8401 tgctcttatg tgtttggatt gtaatcttcg aattcccaag aaaaaaatcg taataagttt
     8461 gaaagtgtca aatcccaagt ttcttttgag caatattcta atattttatc aatttcactt
     8521 ttaataatct tatgatcaaa ctgttctaat attaatgcat tagaccaaaa aaaaccttct
     8581 ttattacaat gatgggaaat ccatttagga gaacaaatgc aaagtgaaaa aatagatgag
     8641 ccttgttctc cttcgattcc gatatccaaa tctatccatc tatggaaatt atctggaatt
     8701 tcgggggtaa atttttcaaa atcaatatca tataaattta tgctttttaa atccaattta
     8761 atcattaggg ctgtcctaga taaataggga aattcaaatt aagttagaat tatccctatg
     8821 agaaaaagtc gtctaagccg gtataaacaa aataaactca ttgagctatt tgtcgcaggt
     8881 gtaactgcaa gaacagcaac agagcctgac agcattgttt atacggattg ttatcgtagc
     8941 tatgatgtat tagatgtgag cgaatttagc catttccgta tcaatcacag cacacatttt
     9001 gctgaacgac aaaaccatat caatggaatt gagaattttt ggaaccgggc aaaacgtcat
     9061 ttacgcaagt ttaacggcat tcccaaagcg cattttgagc tgtatttaaa ggagtgcgaa
     9121 tggcgtttta acaacagtga gataaaagtt cttgttccat tttaaaacaa ttagtaaaat
     9181 cgagtttatc ttagttgtcc aggacagccc cattattttt ataacaccgt gaagccgcac
     9241 agcagtttga acagtgatac gccgtttgcg ggcttacgag tttattttcc cggcctgcag
     9301 tttgagcaat acggtgattt cctacggtta atacaaatgt ttacacattg atacatttca
     9361 tttatagttc cgcctatttg aaaatagaaa atatgaattc gaccgcaagt aaaaccctga
     9421 aaggattgtc gctggtgttt ttcgcctctg gattctgcgc cctgatttac caggtcagct
     9481 ggcagaggct tctattcagt cacataggta tcgatttaag ttcgattact gtcattattt
     9541 ctgtatttat ggtcggcttg ggtgtgggtg cgtatttcgg tggacgcatt gctgaccgtt
     9601 ttccttcaag tatcatcccc ctgttttgca tcgctgaagt atccatcggt ctgttcggtt
     9661 tggtaagcag gggtctgatt tccggcttgg ggcatctttt agttgaggct gatttgccca
     9721 tcatcgctgc tgccaatttc ctcttattgc tgcttcctac ctttatgatg ggcgcgacct
     9781 tgcccttgct gacctgtttt tttaaccgga aaatacataa tgttggcgag tctatcggta
     9841 tcttatattt tttcaacact ttgggtgcgg cactcggatc gcttgccgcc gccgaatttt
     9901 tctacgtctt ttttaccctc tcccaaacca ttgcgctgac agcctgcttt aaccttctga
     9961 ttgctgcttc agtatggctg cgttacagaa aggatggata tagtgaacac taaaccgaat
    10021 actagtttga tttatatgct ttctttcctt agcggcttat tgagcttggg tatagaagtc
    10081 ttgtgggtaa ggatgttttc gttcgcagca cagtccgtgc ctcaggcatt ttcatttact
    10141 cttgcctgtt ttctgaccgg tatcgccgtc ggcgcgtatt ttggcaaacg gatttgccgc
    10201 agccgctttg ttgatattcc ctttatcggg cagtgcttct tgtgggcggg tattgccgac
    10261 tttttgattt tgggtgctgc gtggttgttg acgggttttt ccggcttcgt ccaccacgcc
    10321 ggtatcttca ttaccctgtc tgccgtcgtc agagggttga ttttcccgct cgtacaccat
    10381 gtgggtacgg atggcaacaa atccggacga caggtttcca atgtttattt cgccaacgtt
    10441 gccggcagtg cattgggtcc ggtccttatc ggctttgtga tacttgattt cttgtccacc
    10501 caacagattt acctgctcat ctgtttgatt tctgctgctg tccctttgtt ttgtacactg
    10561 ttccaaaaaa gtctccgact gaatgcagtg tcggtagcag tttccctaat gttcggcatc
    10621 ctcatgttcc tactgccgga ttctgtcttt caaaatattg ctgaccgtcc ggataggctg
    10681 attgaaaaca aacacggcat tgttgcggtt taccatagag atggtgataa ggttgtttat
    10741 ggggcgaatg tatacgacgg cgcatacaat accgatgtat tcaatagtgt caacggcatc
    10801 gaacgtgcct atctgctacc ctccctgaag tctggcatac gccgcatttt cgtcgttgga
    10861 ttgagtacag gttcgtgggc gcgcgtcttg tctgccattc cggaaatgca gtcgatgatc
    10921 gttgcggaaa tcaatccggc ataccgtagc cttatcgcag acgagccgca aatcgccccg
    10981 cttttgcagg acaaacgtgt tgaaattgta ttggatgacg gtaggaaatg gctgcgtcgc
    11041 catcctgatg aaaaattcga cctgattttg atgaatacga cttggtactg gcgtgcctat
    11101 tccaccaacc tgttgagtgc ggaattttta aaacaggtgc aaagccacct taccccggat
    11161 ggtattgtaa tgtttaatac cacgcacagc ccgcatgctt ttgctaccgc cgtacacagt
    11221 attccctatg cataccgcta tgggcatatg gtagtcggct cggcaacccc ggtagttttc
    11281 cctaataaag aactgctcaa gcaacgtctc tcccggttga tttggccgga aagcggcagg
    11341 cacgtatttg acagcagcac cgtggatgct gcagcacaaa aggttgtctc tcgtatgctg
    11401 attcagatga cggaaccttc ggctggggcg gaagtcatta ccgacgataa tatgattgta
    11461 gaatacaaat acggcagagg gatttaaccg tcttaaaggg tttcaggcaa cgcaggtttt
    11521 aggtaacgtc ctgctagttc aaaaaaaccg catcacagca gtcgggacaa aatggtttaa
    11581 acattttgtc ccgaattctt attccta
//
LOCUS       DBBZYD010000065        11537 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.065, whole genome shotgun sequence.
ACCESSION   DBBZYD010000065 DBBZYD010000000
VERSION     DBBZYD010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11537
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.065"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(194..949)
                     /locus_tag="ACJJDL_001452"
     CDS             complement(194..949)
                     /locus_tag="ACJJDL_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HGG7574148.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(1129..2288)
                     /gene="nirK"
                     /locus_tag="ACJJDL_001453"
                     /pseudo
     CDS             complement(1129..2288)
                     /gene="nirK"
                     /locus_tag="ACJJDL_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
     gene            2801..5056
                     /locus_tag="ACJJDL_001454"
     CDS             2801..5056
                     /locus_tag="ACJJDL_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HGG7574149.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRVKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSQEAREKLFNFFFWTSWSASTNRPDENFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTISAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            5235..5768
                     /locus_tag="ACJJDL_001455"
     CDS             5235..5768
                     /locus_tag="ACJJDL_001455"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HGG7574150.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5831..7015)
                     /locus_tag="ACJJDL_001456"
     CDS             complement(5831..7015)
                     /locus_tag="ACJJDL_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HGG7574151.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNVGFTVTNQQAGSRRF
                     QRFAGTDSQRAADFQDVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGTLWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(7055..7459)
                     /locus_tag="ACJJDL_001457"
     CDS             complement(7055..7459)
                     /locus_tag="ACJJDL_001457"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HGG7574152.1"
                     /translation="MTAQPCPICTAQDEDILLQTPNLRVIAIHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
     gene            complement(8825..9262)
                     /gene="rnhA"
                     /locus_tag="ACJJDL_001458"
     CDS             complement(8825..9262)
                     /gene="rnhA"
                     /locus_tag="ACJJDL_001458"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HGG7574153.1"
                     /translation="MDQTVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            9376..10245
                     /gene="tehB"
                     /locus_tag="ACJJDL_001459"
     CDS             9376..10245
                     /gene="tehB"
                     /locus_tag="ACJJDL_001459"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HGG7574154.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKAENLPEILLSGYSSEGGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKLKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAARDTVPAGRALDMGCGQGRNALFLGLKGFEVTAVDHNPAALANV
                     AELAEAESLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPEVIADMQAHTAVG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVKYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPE"
     gene            complement(10295..11101)
                     /gene="thiD"
                     /locus_tag="ACJJDL_001460"
     CDS             complement(10295..11101)
                     /gene="thiD"
                     /locus_tag="ACJJDL_001460"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HGG7574155.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETIFAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT         2572 a         2791 c         3223 g         2951 t
ORIGIN      
        1 aaagttgcgg gaatgacgaa aagttgcggg aatgacgaaa agttgcggga atgacggttc
       61 gggcattcct taaattaccc gtgtatcgct gtaaatctta gagatggcgg aatatagtgg
      121 attaacaaaa accagtacgg caaggcgagg caacgccgta ctggtttttg ttaatccact
      181 ataattgaag gggttatcgg cttgtgcaac ggaagcccaa gttgtgcaag acatatttgg
      241 attgcaggct ggtacggatg ccgtagcgga ggaaggcggc atagttggac gagtcgctcg
      301 acccgataga cgcgccgctg caaaacattt gcgcgttggc attgccggaa gaaagcaggc
      361 tgctgttgaa atcttccgtc cattcccaaa tcagcccgtg catatcataa acgccccagt
      421 agttcgggcg gcctttgccg acatcgtgca ggcctttccg tccgccgtcg gcataccaat
      481 cgagaatagt gcggttgtag ccgggttcgt ttgagccgtt tttctgcgtg gcggaagcaa
      541 gtccggcaaa ttcccattcg tcaatggtcg gcaggcgttt gccttgtgcg gcgcaatagg
      601 cgttggcggc aaaccaggaa acattggtta ccggttgttt taattcgccc gccttcggcg
      661 catagctgcg gctgccgttt ttcatccaat gcttcaggta agcgggttct gcctgtttgg
      721 aaccgatcct gcctttttgc cattgggggt ggctgttgac aaattcggca aactcggcat
      781 tggtaacggg atatttatcc agtttgaacg gtttgacttt aatcaggccg gtatcttttt
      841 tcagataaag cgggcggtag ctgccgcctt cgatttgaac catttcggca gccgccgctt
      901 gagtgccggc gagtgccgca cagagaaaga gtaaccgggc aaacttcata tcatgcctcc
      961 tgacaggcag ttaaaattga tttttcagac ggcattttaa acaaaaagcc gcgaatgccg
     1021 tctgaagaat caatcttccg aaaggaaaga ttggttgtta aaaaaccact gccgtgcgta
     1081 attaagtacg gcggcagtgg ttcgtttgcc taaaaatggg tgttcaattt agtaatcgct
     1141 ttttgcagga gcagaggctg caggagcaga agctgcggga gcggaagcag caggagctgc
     1201 accgttaccg gcgtaagcgg tatcactcaa tttttgagtc atgatttcag ggttttctgc
     1261 accttctact ttcaattgac ccagtgcgcc tttgttgaat gcgcggaaga tagagtggtc
     1321 aaccaaagtg tagctgcccg ggatgtcgac tttgaattcg acgatagcag agccgccggc
     1381 aggaacgatg gtactttgta cgttttcgtt aatcagtttg ccgccttcaa cataaacttt
     1441 gtcgaagatt tcaccgatta cgtggaagga agacaccaag ttcgggccgc cgttaccaac
     1501 gtacatacgt acagtttcgc ctgctttggc tttcagggcg ttgtcgccgg cgatagcacc
     1561 tacgtgaccg ttgaatacga cgtattcagg ctgttcggca acagctttgt ccatatcgaa
     1621 cggttgcagg ccttgcgcac cttttttgcc tttggtgtag aagtcgcctt ggacgatgta
     1681 gaactcttta tccactttcg gcaggccttc tttaggctcg accaaaatca ggccgtacat
     1741 accgttggcg atgtgcatac cgaccggcgc gacggcgcag tggtagatgt acagacccgg
     1801 ttgcagggct ttgaagctga atgtggaagt gcggcccggg cggtaaaggt cgcggctgca
     1861 ccgccgccct gaccggttgc ggcgtggaag tcgacgttgt gcggaacggt agaagaagga
     1921 ttgttggaaa attccacttc aaccgtatcg ccttcgcgta cgcggatcat gcgacccgga
     1981 acgtcgccgt caaatgtcca gtagcggtat tccacaccgt cttccatggt catggttttt
     2041 tcgacggttt ccattttcac gcgtactttg gcagggtagt cgcggtcgat tgcaggaggt
     2101 acttctggag cgtgtgtggt aaccgcatcg ataacgggca gttcgcctgt cggcgtttcg
     2161 gcggcggttt gtgcggcgga acttgcggct tctgcggaag cggcaggggc ttgcgcggca
     2221 ggttcgcctc cgcaggcggc taatgcgaat aaggaagcaa tcattgcagc taaggcttgg
     2281 cgtttcataa tgttttcctt ttgtaagaaa agtagaggaa ttggttaaga acttggtgtg
     2341 attatgcgtt tgccccattg gtggcatttt gatttaagtc aaataattca taaaatatga
     2401 acttaaaatg atacttctaa tactttatag ctactaaaaa ttacaatgaa taggctgatt
     2461 tgcttaaggg cttcggcaaa tcaggcaaag gcagggtagt tgccgactaa agaataatga
     2521 tagttattat catatatgta tttgttttat atgtgagttt ctttgaacaa atgtttattt
     2581 gtgcggtaaa ccgtgctaca atctttaaca ttcatattct gtgaatttta aacagctgat
     2641 ttatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt acaaatagta
     2701 cggaaccgat tcacttggtg cttcagcacc ttagagaatc gttctctttg agctaaggcg
     2761 aggcaacgct gtactggttt ttgttaatcc actatattaa atgggacagt acaagaagct
     2821 gtggtacttg ctgtttgccg ttctggcggt atgctttacc attcttggct atatgggcag
     2881 cgaggtttat aagaaagccc cgccttaccc cgaacaggtc gtttccgcat ccggcaaagt
     2941 cttgatgacg aaagacgata ttttggcagg tcagtctgca tggcagagta ccggcggtat
     3001 ggaagtcggt tcgattctgg gtcacggcgc atatcaggct ccggactgga cggccgactg
     3061 gctgcatcgt gagttgtccg cctggttgga tttgaccgcg caacagactt acggcaaaaa
     3121 attcgatgaa gtttcccctg aggaacaagc tgtcttgaaa acacgcttgg ctgacgaata
     3181 ccgtaatcaa agccgtgtga aagaagatgg ttctgtggtc atcagcgata cgcgtgtaaa
     3241 agccatcgaa agcatcctgc cttattatca cggtgtttac ggcgatgatc ccgcgctgca
     3301 aaccacccgc gaacactttg caatgaaaaa caacacattg ccaagccaag aagcgcgtga
     3361 aaaactgttc aacttcttct tctggacttc ttggtctgct tcgaccaacc gtcctgacga
     3421 gaattttact tacaccaaca actggccgca cgaacctttg atcaacaacg taccgaccac
     3481 tgaaaactat atgtggtcat tcaccagcgt tgttcttctg ctgatgggca tcggtttgct
     3541 gatgtggggt tattccttcc tgaccaaaca cgaagaagtg gaagtgccgt ctgaagaccc
     3601 gatttccaaa atccaactga ccccttcgca aaaagcattg ggcaaatacg tcttcctgac
     3661 ggtcgccctg tttgtggtac aggtattgct gggcggtctg accgcgcact acaccgtcga
     3721 aggccagggt ttctacggca ttgacgaggc gttgggcttt gaaatgtccg actggttccc
     3781 ctacgccctg acccgtactt ggcacatcca atccgccatc ttttggattg caaccggctt
     3841 tttgacggca ggcttgttcc tcgcgccgat tgtcaacggc ggcaaagatc ccaagttcca
     3901 acgtgccggc gtaaacttcc tctatatcgc cctcttcatc gtggtcggcg gttcttacgc
     3961 gggcaacttc ttcgcgttga cgcacatcct tcccccggaa tttaacttct ggttcggaca
     4021 ccaaggttac gaatacctcg atttgggacg tttctggcaa cttctgctga tggtcggtct
     4081 gttgttgtgg ctgttcctga tgctgcgttg cacgatttcc gcctttaaag aaaaaggcgt
     4141 ggacaaaaac ctgctggcaa tctttgtcgc ttctatggtc ggcgtgggcg tgttctacgc
     4201 gccgggcctg ttctacggtg aaaaatcccc gattgccgtt atggaatact ggcgttggtg
     4261 ggtggttcac ctgtgggtgg aaggcttctt tgaagtattt gccactgccg cctttgcctt
     4321 tgtcttctac aatatgggct ttgtccgccg cagtaccgcc actgcctcca ctttggccgc
     4381 tgccgccatc tttatgttgg gcggcgttcc tggtacgctg caccacctgt acttctccgg
     4441 ctctacctcc gcctctatgg caatcggtgc ctgcttctcc gctttggaag tcgtgccgct
     4501 ggtgttgctg ggccgtgaag catacgaaca ctggtcttac caacacctgt ccgactgggc
     4561 gaaacgcctg cgttggccgc tgatgtgctt cgtggcagtc gccttttgga atatgatcgg
     4621 tgccggcgta ttcggcttcc tgatcaatcc gccgatttcc ctgttctata tccaaggttt
     4681 gaacacttct gccgttcacg cgcacgccgc cttgttcggt gtgtacggtt tcttggcatt
     4741 gggcttcgta ttgctggttg cccgttattt gaaaccgaac gcgcagtttg acgacaaatt
     4801 gatgacttgg ggtttctggc tgctcaacgg cggcttggtc ggtatgattg ccatcagcct
     4861 gctgcctgtc ggcgcgattc aggcatacgc ctctatcacg cacggcctgt ggtatgcgcg
     4921 tagcgaagag ttcctgcaaa tggaaatctt ggatactctg cgttgggttc gtactgctgc
     4981 tgacttgatc ttcatcggcg gtgcaatctg cgttgccatc caagccacta aaatcgtatt
     5041 cggccgcgac aaataagttt tgcggtatga aatgagcaac tgcacccgtt ttcgggtgca
     5101 gttttttatt gcggattggg acgggaatgg aaaaggatgt ggatttttta ttttaatcgg
     5161 ctatacaatt gctgctttca tgccgtctga agcacgtttc agatggcatc ggtttacatc
     5221 agataaggat aaaaatgggt atttacgatt ttcaaatgaa agatgcggaa ggcaatgcgg
     5281 ttgatttgtc aggctatcgc ggcaaggttc tgctgattgt caacacggca acgcgttgcg
     5341 gtctgacccc gcaatacgag gctttgcaga agctgtatgc acaatatacc gcagaaggct
     5401 tggagatttt ggattttccg tgcaaccagt tccgcgaaca ggctcccgaa agcagcggag
     5461 aaattgccca agtgtgtatg atgaagtttg gcacgaagtt taagattttc gacaaaatcg
     5521 aagtcaatgg agcaaatacc gcgcccttgt atgcctacct gaaatccgtc aaaccgcaag
     5581 ataaaggcaa tcatctgttt aaagatttcg tgttgaagct cgcagctttg ggagagaagc
     5641 gcgacgaagg cgacatcaaa tggaacttta ccaaattcct cgtcaaccgc gacggcgaag
     5701 tggtcgagcg ttttgcgcct agtgttacgc ccgaagaaat cgaagccgat attcgggcat
     5761 tgctgtaatc tgccgccgtc ttgggaaatg ccgtctgaag gcttcagacg gcatttgtcc
     5821 gtttgcgggt ttattccgaa atatcggcaa caccgctttc ggggaagatg ggcaaatccg
     5881 gcggtgggag cagggtatcc aaagtcaggg cggacgcatc gagtgtcggg tagccttcaa
     5941 acgcgaccga ataaccgctg tttccgttca tacggattcg ggcgtgcgcg cctagaggga
     6001 aagtgatttt gtcggcaatg tgtccgaacg ggaagcccgt cagcacgggg attttcgccg
     6061 tgcgcgaaac atggttggca acggcggaaa aatcataaga cggatcatag acatctcgaa
     6121 ttttttccat acggaaattg ccgaacacga tggcgcgctg tttcttcaaa atacccgaaa
     6181 gatacagcgt attgagcata cgttcgatgc ggtagggctg ttcgccgaca tcttcgagga
     6241 acaaaatgcc gccgtcgatg tcgggcatat aaggcgtacc ggcgagcgag gcgaggacgc
     6301 ttaagttgcc gccccacaac gtgccttcgg tttcgacatc ggcgcgttgg atataaggaa
     6361 catcaacggt caggcggttt tgggttgcac ccttgataaa ggcatccatc gtaaacgcac
     6421 cgggggcggg tttgccaaaa tcgctataag ccatcgggcc ggcaaaactc atcatattgc
     6481 cttttgccaa caatgccagc tggacggcgc atacgtcgct gaatccgaaa aacagcgtgc
     6541 cgtgttcgcg catccttgcg ccgagcgaag caaaatcgat atgcggcaga atgcgtgccg
     6601 caccataacc gccgcgcaag cccatcagca ctttaggtgt ggcaacgcga ccggaagcga
     6661 catcttggaa atcggcggca cgttgtgagt ccgtgccggc aaaccgttgg aaacggcggc
     6721 tgcccgcctg ttggttggtt acggtaaaac cgacattgta aaggcgggtt aaggctgtgt
     6781 tgacgcggtt ggtgtcttcg gcaaatcctg acgaagcgac aacgcgcaga aggttgccgt
     6841 ccgaactttg acggcgtggc gtttggagag gcacggttcg ggctttcaca acggaatggg
     6901 aagagggaag gggcggaacg gatgtggcgg atgtgccgca agcctgaagc agccccgcgc
     6961 cggcagcggc ggtgcaggtt ttcagaaaac ggcggcggga ggtcggttcg gtcataattt
     7021 ccctttcata cggtttcaga cggcatcggc gggcttaaag cagcttttta agctgttccg
     7081 tccaatcttg cggcagggtc ataccgtgtt tccggacggg gtttgcccaa atcggcgcgg
     7141 ggaaggacgc atcgttttca aagcgggcga taatatgcca gtgcaggtgc ggcacgacat
     7201 tgcccaagct ggcgaggtta atcttggcag gttgaaacac ttggcgcata gcggcttcga
     7261 ctttgtacac catttccatc aattcgccgc gttccgctgc cgaaaggtcg gtcatttcgg
     7321 cgatgtgctt acgccaaatg acgcggcaga atgcaggcga accgctgtcg ttatggatgg
     7381 cgatgacgcg gaggttgggg gtttgcagca aaatatcttc atcttgtgcc gtgcagatgg
     7441 ggcagggttg ggcggtcatt tttccttatt cctgaaagtg tttaaaaaac ggtaggataa
     7501 tttctgatat agtggattaa caaaaatcag gacaaggcga cgaagccgca gacagtacag
     7561 atagtacgga accgattcac ttggtgcttg agcaccttag agaatcgttc tctttgagct
     7621 aaggcgaggc aacgccgtac tggtttaaat ttaatccact atagtttaat ttgtctgtcc
     7681 gcattgccgc taattgtacc acttcatcgt atttcctttt cggttgaaac cccgccactc
     7741 ggacatctgt ccttcggggc ggcaggatca gactttattt gggagggggt gtaacccctt
     7801 ccaaatcagg acgacacata gggaggtgct ttatgtgtcg tcctgtgtgt tgaaatatat
     7861 cggacgcgtt tgaacagttg tgcggcaaac tgttttagcg gcaggcaaga gatgccgtct
     7921 gatgccgtct gaagcccatt gtccgtcatt cccacacagg cagttgctac ggttgctgaa
     7981 gccccttagc cgtcgcgcag gcggttgcta cggttactaa aatcccgtca ttcccgcgca
     8041 ggcgggaatc cagtccgttc ggtttcagtt gtttctgata aatcttgcag cgttgggttt
     8101 ttagattccc gctttcgcgg gaatgacggg gcggtcggat gccgcctgaa actccgtcat
     8161 tcttgcaact tttcgtcatt cccgtgaaaa cgggaatcta gaacttcaaa ctttcagata
     8221 atctttgaat attgccgttg cccgacggtc tagattcccg cttgcgcggg aatgacggta
     8281 gagcggtttc agttgctccc gataaatgcc gcaatctcaa atcccgtcat tccctcaaaa
     8341 acagaaaaac aaaatcagaa acctaaaatc ccgtcattcc cgcagctctt cgtcattccc
     8401 gtgaaagcgg gaatctagac cttttaaatt ttcacacggc ttttgaatat tgccgttacc
     8461 cgaaggtctg gattcccgcc tgcacgggaa tgacggcaga gcggtttcag ttgtttctaa
     8521 ataaattttt gcagcgttgg atttttagat tcccgctttc gcgggaatga cggggcggtc
     8581 ggatgccgcc tgaagcccga caaagccccc aatgccgtct gaaacctcgt cattcctctg
     8641 ctgtccgcaa cttttcgtca ttcccgcaaa agcgggaatc tagagcctct aaattttcag
     8701 acggcttttg aatattgccg ttgcccgacg gtttggattc ccgcctgcgc gggaatgacg
     8761 gtggaggacg atgccgtcta aagcccatta gcggtttcag acggcatttt tgccggagcg
     8821 gcagtcagga aaactgcgct gcgccacggt ttgccaaatc gtcggcgcgt tcgttttccg
     8881 cgtgtcccgc gtgtccttta acccaagtcc agctgacttg gtgctgccca accagaacgt
     8941 cgagttcttt ccacaagtcg tcgtttttga cgggctgttt ggcggcggtt ttccagccgt
     9001 tgcgcttcca accgtgtatc cagttttcca tgccgttttt gacgtattgc gagtcggtgc
     9061 agatgatgac ggtgcagcgg cgtttgagcg atttcagtcc ttcgatgacg gcggtcagct
     9121 ccatgcggtt gttggtggtt tgcgcttcgc cgccgaaaag ttctttttcg tggctgccgt
     9181 agcgcatcaa cacgccccag ccgcccgcgc cgggattgcc tttgcacgcg ccgtcggtgt
     9241 aaaggtaaac ggtttggtcc attattgtgc ctttgtgtgg tgtccggcgt gattataagc
     9301 ggtttgtgcg ccgtgccgtc tgaaagattg cggcggatta aaataggcat ataatgtgca
     9361 actttatttt tgaatatgaa ggagcggata gtgggtcaaa gcggcgagtt gttttgtttc
     9421 ggacaaatgc ccgtatggaa ggcggaaaac ctgccggaaa ttttgttgtc gggttattcg
     9481 tccgaaggag gggaatgggt ctgcctgaat gtgttgcagg gcgatgtcga agtccgcacg
     9541 caggacgggg cggcagaggt ttggtcggcg gaaagcggcg attgcgtgtt tgcgccgcag
     9601 caggtgtttt cggtcaaact gaaaacggac gatgccgaaa tccgtttgtc gctgtattgc
     9661 gcggcggcag actattttca caaaaaatac gggatgagtg ccacgcattc tgcggtcgcg
     9721 gcggcacggg ataccgtacc ggcgggcagg gcgttggata tgggctgcgg acaggggcgc
     9781 aacgcgctgt ttctcggttt gaaggggttt gaagttactg cagtcgatca caatcccgcc
     9841 gccttggcaa acgtggcgga gctggcagag gcggagagtt tgaacgtccg cacgctggaa
     9901 tatgatttga acgccgccgc cttgcagggc gagtttgatt atattgtggc aacggtggtg
     9961 ctgatgttcc tgatgccgca gcgcgtgcct gaagtgattg ccgatatgca ggcgcatacg
    10021 gcggtgggcg ggtacaactt aatcgtatcg gcaatggata cggcggattt cccctgtccg
    10081 atgccgttcc ccttcaaatt taaagaggga gagctgaagg attattatcg ggattgggag
    10141 ctggtcaaat ataaagaaga attgggcgcg atgcacgcca aagacgaaaa cggcaatccg
    10201 atacggttta aatttgtaac gatgctggcg aaaaagcctg aataatcctc aaaaatgccg
    10261 tctgaacatt ttgtttcaga cggcattttt acgtctagtc ccgatacgcc caatgattga
    10321 ccggcccgtg tcctgcgccg atttccaaag ggtttgagat tgccgccgtg atgtatgcct
    10381 tggcagtctg tacggctttg caaacgtcta agccttttgc caactcggcg gtaatgcagg
    10441 cagaaaacgt gcagcccgtg ccgtgcgtgt gggcggttgg aaagcgcggg ctgtccaatt
    10501 ccagcgtttc attttgcgta aacagccaat ccgtgcagcg tccgcttgtg ctgccgttca
    10561 aatgtccgcc tttgataacg acatttttga caccgtaatc aagcaggatt tttgccgcac
    10621 gttccgcatc tttacggttt tcgatatgca cgccggtcag ggcttccgcc tcgggcaggt
    10681 tgggggtcaa tacatccgta tcgggaagca gcaggcgcgt cagtgccgca acggcggaat
    10741 cctgcaacag cggcgcaccg cctttggcaa tcatcacggg gtcgagtacg cgcctgccga
    10801 agtcgcagtg tttcagtttg tcggcaacgc attcgatgat ttccgccgtg ccgagcattc
    10861 ctattttgta ggcgcggatg tcaaagtctt ccctgattgc ttggatttgt gcgaagatgg
    10921 tttcggtcgg gacgagatga accgccgaca cgcccaaggt attttgcgcg gtaacggcgg
    10981 tgatgacgca cgttccgaac acgccgcgca tctgaaacgt tttcaaatcc gcctgaatgc
    11041 ccgcaccgcc gcccgaatcc gaaccggcga tggtaagcgt ttgcacaaaa gagcttttca
    11101 tttgttcctc cttaatattg tgtccgataa aaagggctaa tgcctgtaaa aaagcacggc
    11161 gatgccgtct gaaaaccgca gcgcggggtt tgtggtgcat tatatgccgt attgcaggac
    11221 aaggcacagg gcagggcggc ggggtgcatc gtagcaactg tatttttgcc cgacggggtg
    11281 aaaaatacag ttgctacacc cactgataat gaaaaaagag agcaatgccg tctgaaccgc
    11341 gtgttgcggc gagcataaac cggcacgctt tattcgtcat tcccacaaaa acagaaacct
    11401 aaaattccgt cattcctacg aaagcgggaa tccagtgtgt tcggtttcag ttgtttttgg
    11461 gtttcgggtg atttccaaat catcattccc gcgcaggcgg gaatctagcc cttggggcag
    11521 cggcaatatt tataaag
//
LOCUS       DBBZYD010000066        11491 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.066, whole genome shotgun sequence.
ACCESSION   DBBZYD010000066 DBBZYD010000000
VERSION     DBBZYD010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.066"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            86..1099
                     /locus_tag="ACJJDL_001461"
     CDS             86..1099
                     /locus_tag="ACJJDL_001461"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7574156.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGGILFDLQQLADKKVDLILHPSSLNYHVIPKGADFSDNDFVRHFETLVEGRYYIANA
                     WTKIVRREIIIKNNLFFPKGYIHEDFPYSLQLARFIKTFAFYDNPFYQYRVLGGSISH
                     NIKYKNFSDVLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNII
                     LIYRKYFSFKEKCRKIFGAKTIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKF
                     FSE"
     gene            complement(1078..1212)
                     /locus_tag="ACJJDL_001462"
     CDS             complement(1078..1212)
                     /locus_tag="ACJJDL_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574157.1"
                     /translation="MPSEAGFVASDGIAAILAGRGLFVPTSRALLIWGLPEAYSEKNF
                     "
     gene            1321..2658
                     /gene="ribBA"
                     /locus_tag="ACJJDL_001463"
     CDS             1321..2658
                     /gene="ribBA"
                     /locus_tag="ACJJDL_001463"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HGG7574158.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGAALLDRTLPKGA
                     NQAYKWDSKSYGIGAQILVGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2818..2934)
                     /locus_tag="ACJJDL_001464"
     CDS             complement(2818..2934)
                     /locus_tag="ACJJDL_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HGG7574159.1"
                     /translation="MPSERLSDGILFGLENTYAVLSLKERIQKTKATGIYRK"
     gene            complement(2966..3487)
                     /locus_tag="ACJJDL_001465"
     CDS             complement(2966..3487)
                     /locus_tag="ACJJDL_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG7574160.1"
                     /translation="MLPTGFITAQSSIDKKIREYLVENKMLAGMVSMPSNIFATTGTN
                     VSILFIDKANKDNVVLIDASGLGEKIKDGKNQKTVLSREEEQKICNTFTHKQAVEDFS
                     VVVGYDEIKAKNYSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAKLEK
                     EIKDRLAMLEFNS"
     gene            complement(3511..4191)
                     /locus_tag="ACJJDL_001466"
     CDS             complement(3511..4191)
                     /locus_tag="ACJJDL_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG7574161.1"
                     /translation="MTEQHFTEQTKSLIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKQIRKENPDEPIEFINMDIEGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAAHNAELFSVKTEGGAKIVLFERISQYITDEGRRDDFCHALISKLAGFSFEA
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMADILVPKEVRGQIRSVD
                     VYSISCLA"
     gene            complement(4239..5432)
                     /locus_tag="ACJJDL_001467"
     CDS             complement(4239..5432)
                     /locus_tag="ACJJDL_001467"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7574162.1"
                     /translation="MKRQITIGEIAEINANSLTQKDMFQEIMYLDTGNITRNEIDNIQ
                     VLNVMMDKIPSRAKRKVKDKTIIYSTVRPNQEHYGFLENPGDNFIISTGFSTIDVYDE
                     NTDEKFIYYLLTQKHITDYLHTIGENSVSSYPSINPDDIANLKFAVPDLKTQQSIAAV
                     LSALDKKIALNKQINARLEDMAKTLYDYWFVQFDFPDANGKPYKSSGGEIVFDETLKR
                     EIPKGWGSIELQSCLAKIPNTTKILNKDIKDFGKYPVVDQSQDFICGFTNDEKSILNP
                     QDAHIIFGDHTRIVKLVNFQYARGADGTQVILSNNERMPNYLFYQIINQIDLSSYGYA
                     RHFKFLKEFKIILPSKDISQKYNEIANTFFVKVRNNIKQNHQLTQLRDFLLPMLMNGQ
                     VSVAE"
     gene            complement(5559..8564)
                     /locus_tag="ACJJDL_001468"
     CDS             complement(5559..8564)
                     /locus_tag="ACJJDL_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease"
                     /protein_id="HGG7574163.1"
                     /translation="MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNENWDKPTNIFPKI
                     FIESLCRINPDLSPDDARRLLTDIRLELDNEDLGQKFYERLTNQSGGKKLIDFQNFDN
                     NSFHVVTELPCINGDEEFRPDITLLVNGMPLVFIEVKKPNNKGGIGEERERMGKRAKN
                     SKFRRFINITQFMIFSNNMEYDDGATEPAQGAFYASSAYGKPVFNYFREEHKLNLAEL
                     LNTLSDGLENNVLQDNNLPVIKHSPEFISNKSPDTPTNRILTSLLCRERLSFLLQHGL
                     TYVKASQGLVQKHIMRYPQLFATLAIEKHLANGGKKGVIWHTQGSGKTALAYYNTRYL
                     THYYAKQGIVPKFYFIVDRLDLLKQAQREFTARDLVVHTIDSREAFAADIKSAQTLHN
                     HAGKAEITVVNIQKFQDDPDVVARNDYDLAIQRVYFLDEVHRSYNPKGSFLANLNQSD
                     VNAVKIGLTGTPLIGVTAGNVNTRELFGDYIHKYYYNASIADGYTLRLIREAISSQYK
                     AQLQAALAQLEVEKGSFDRKEIYAHPHFVRPMLDYILGDFAKFRKTNQDESLGAMVVC
                     DSAEQARQLFEHFQTASDHNFTAALILHDVGTKDERDQWVKDFKAGKTDILFVYNMLL
                     TGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSYRYGYVVDFADIEREFDKTNRAY
                     WDELSNELGDEIGSYSQLFKTAEEIEQEIADIKNALFDFDTENAEEFCSQISQIEDKK
                     QLLALKKALQTSKELYNALRLQGSHEFLVHLDFDKLNLLYRETAARLDTLNLAEKLQQ
                     GDTAHLLNEALEDVYFQFVKIGEAELKLADDLKDIMRKVREGLAGNFDQDDPEYISLR
                     EELERIFKKKNLAEVGQEEMQANIATLQIVYAKIKELNRQNDLLRHKYGGDAKYARTH
                     KRLMENAAFYGDKLKVFNALNGVKADADQKVLDMEQILDNQNYFEKQMQGIVLKRFRT
                     EQQFPVQPQDIQAINRLLVREYLKESGRM"
     gene            complement(8678..9988)
                     /locus_tag="ACJJDL_001469"
     CDS             complement(8678..9988)
                     /locus_tag="ACJJDL_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HGG7574164.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLAWLKSLDEEALKAK"
     gene            10300..10721
                     /locus_tag="ACJJDL_001470"
                     /pseudo
     CDS             10300..10721
                     /locus_tag="ACJJDL_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580802.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11409..11491
                     /locus_tag="ACJJDL_001471"
                     /pseudo
     CDS             11409..11491
                     /locus_tag="ACJJDL_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
BASE COUNT         2905 a         2682 c         2737 g         3167 t
ORIGIN      
        1 aagttacagg gtgcggatgc aaacgcattg cgagcgcggg tttgaggcat acgcgcaaac
       61 atcttaatat aatggattga tatttatgat tttctccatc atcgtcccta tttacaatgt
      121 ggaaaaatac ctccgctgct gcgtggattc cgtgcttgcc gaaaattttg ccgattatga
      181 aatgattttg gtcgatgacg gttcgccgga cggctgcggg aagatttgcg acgaatatgc
      241 aggcaaatat ccgcatataa aagtgattca tcaagaaaac ggcgggctgt cggatgcccg
      301 caacgccggt atccgggcgg caaaaggcga ttacctaatc tttttggaca gcgacgacta
      361 ttgggccgat accaaccgtt caaaaaacgc gggggggggg attctctttg atttacaaca
      421 acttgcagac aaaaaggttg atttgatcct gcatccctcg tccctcaatt accacgtcat
      481 ccccaaaggg gcggactttt cggataatga ttttgtccgc cattttgaaa cgctggtgga
      541 ggggcggtac tatatcgcca acgcgtggac aaaaatcgtc aggcgggaaa taatcatcaa
      601 aaacaatctg tttttcccaa aaggatacat tcacgaggat ttcccgtaca gtttgcaatt
      661 ggcgcgtttt atcaagactt ttgcctttta cgataaccct ttttaccagt accgcgttct
      721 cggcggctct atcagccaca acatcaaata caaaaatttc agcgatgtgc tgacgcatct
      781 cgaccggggt gtggattttt tagtcgaaaa caaaaattcc cccatctacg gcggtttgca
      841 aaaatttgtc ttcgacaata tcggctatct gaggtctata ttggtaaggc tttatttttc
      901 caaaaacatt atcctcatct accggaaata tttttcattt aaagaaaaat gcagaaagat
      961 attcggcgcg aagacaatcc gtccggtttt tatcgggaag accgcattca tcataggatt
     1021 gccgatattg cgcctgctcg taccgcctat gctgtacccg gcaatcaagg ccgtttatca
     1081 gaaatttttt tcggaataag cttccggcaa accccaaatc agaagtgcgc gggaagttgg
     1141 gacaaacagc ccccggccgg caaggattgc ggcaatgccg tctgaagcca cgaatccggc
     1201 ttcagacggc atctgtttac caaaaagcaa ataattcggt ttggcgaaaa aaacagattt
     1261 gctttttggt aaatacgcga ttacaatccg ctacatccga tttctacaaa ggatgaaacg
     1321 atgaccgaca cagccggtct gcgccgccgc aacctgcggc aatggatagc agaacactac
     1381 ggcggtttgc aaacccgttt tgccgaagcc gttgccctca acacaggcga actctccgcc
     1441 cttttgaaaa acaaatcctt cggcgagaaa aaagcccgta aaatcgaaca ggcggcaaaa
     1501 atgcccgcct tctggctcga taccgaacac accgcccgcc cgcccgaaca cacaggaaaa
     1561 cacaccatgt cccatatttc ccccatcccc gaaatcctag ccgacatcaa agccggcaaa
     1621 atggtcatca tcaccgatgc cgaagaccga gaaaacgaag gcgacctgct gatggcggcg
     1681 caattcgtca cgcccgaagc catcaacttc atgatcaaac acgcgcgcgg cttggtctgc
     1741 ctgccgatgg acggcgaaat ggtcgaaaaa ctcgggctgc cgatgatgac ccaaaaaaac
     1801 ggcgcgcaat acggcaccaa ctttaccgtc tccatcgaag ccgcacacgg cattaccacc
     1861 ggcatttccg ccgccgaccg cgccctgact attcaaaccg ccgtttcccc gaccgctaaa
     1921 cccgaagaca tcgtccaacc cggtcatatc tttccgcttc gcgcccaaaa aggcggcgta
     1981 ctcgtccgcg ccggacacac cgaagccggc gtcgacctgg cgcaaatgaa cgggctgatt
     2041 cctgcctccg ttatttgcga aatcatcaac gacgacggca cgatggcgcg tatgcccgaa
     2101 ctgatgaaat tcgccgaaga acacaagctc aaaatcggca cgattgccga cctcatcgaa
     2161 taccgcagcc gtaccgaaag cctgcttgaa gacatgggca atgcgcctgt acaaaccccg
     2221 tggggcgagt tccaacaaca cgtttacgtc gacaaactct ccggcgaaac ccacctcgcc
     2281 ctcgtcaaag gcacgccctc cgccgacacc gaaaccctcg tccgcgtcca cgaacccttc
     2341 agcgtcatgg acttcatcca agccaacccg cgccattcat ggtcgctgcc caaagcactc
     2401 gagcgcatcc aacaggccga aagcggcgta gtcatccttc tgcaccgcac cgaagacggc
     2461 gccgccctgc tcgaccgcac cctgcccaaa ggtgcaaacc aagcctacaa atgggacagc
     2521 aaaagctacg gcatcggcgc acaaatcctc gtcggcctca acgtcaaaaa actgcgcgtc
     2581 ctcgggcagc cctcatcttt caccggcctg accggcttcg gtttggaagt cgtcggcttt
     2641 gaagaagcgg aaaaataata tagtaaattc aaatacttta tatttgcttt atttattgca
     2701 ttatttccgt gcaaacgaaa acccggtctg ttgggttgga ttttgttttt gcaaatttcg
     2761 ggtaacttct aattcgtcat tcccgcgcag gcgggaatcc ggttcgtcgg gtttttgtca
     2821 tttccgataa attcctgtgg ctttggtttt ttggattctc tctttcaggg aaagaacggc
     2881 ataagtattt tccaaaccaa acaaaatgcc gtctgaaagc ctttcagacg gcattttaag
     2941 tttgaccggt ttcattcatc ggtatttacg aattgaattc caacattgcc agcctatcct
     3001 taatctcctt ttccaatttg gcagattcgg cgaaaagttt atccaaatcc gctgaaaatc
     3061 ccgccatttt ttgcgcaaat tcgtcggcgg aaatatccac ataatcaatc tttacctcga
     3121 aatactgccc cgccgacagg ctgtaattct tggctttgat ttcatcgtag ccgaccacca
     3181 cgctgaaatc ttccactgcc tgtttgtgcg tgaaagtatt gcaaattttt tgttcttctt
     3241 cgcgggagag tacggttttt tggtttttgc cgtctttgat tttttcgccc aagcccgatg
     3301 cgtcgattaa taccacgttg tctttattgg ctttatcgat aaacaggatg gaaacgttgg
     3361 ttcccgtggt ggcgaaaata ttggaaggca tggaaaccat gccggcgagc attttgtttt
     3421 ctaccagata ttcgcggatt tttttgtcga tactcgattg ggcggtgata aagcccgtcg
     3481 gcaacacaat cgccgctttg ccgttttctt tcaggctaaa caagatatgc tgtaaacgtc
     3541 cacgctgcgg atttgcccac gtacctcctt tggcaccaaa atatccgcca taatccgcgc
     3601 tactgcgtgc ggcgtgtagt attcggcata tttgccgccc gaattactgt tgtagtcttt
     3661 aatcaggtac tcaaaaatcg tggcgaaaaa atcaaatttt tgcgcaaaaa tcgcctcgaa
     3721 gctgaaaccc gccagtttgg aaatcagcgc gtggcaaaaa tcgtcgcggc gaccttcatc
     3781 cgtaatatat tgactgatac gctcgaacaa cacgattttc gccccgcctt cggtttttac
     3841 cgaaaacagt tccgcattat gtgcggcaat atcggtcagc gtatcgtcaa agagtttggc
     3901 aaagtccgcg ccgttttgtc gctctgataa atacttgatg gaatgttcag gcttcaaaac
     3961 ggctgttttt ccctcaatat ccatattgat gaattcgatt ggctcgtcgg gattttcttt
     4021 gcgaatttgt ttaacttcga aatcgtattt gtcgtttagg aatttataca aaaatgcctg
     4081 actgatgatt ttgaactcgt tgccgtcatt gcccaaacca tagttggcgc aaatggtttt
     4141 taagctgtcg attagggatt tggtttgttc ggtaaagtgt tgttcggtca tttttttctc
     4201 gtttgtttta ttttgtaggt ctgattcttg aatttggctt attccgccac agaaacctgc
     4261 ccgttcatca gcatgggaag taggaaatcg cggagttggg ttagttggtg gttttgtttt
     4321 atattatttc gaactttaac aaagaaagta tttgctattt cattatattt ttgagaaata
     4381 tctttactag gtaaaattat tttaaattct tttaagaatt tgaaatgtct agcatatcca
     4441 taacttgata aatctatttg atttatgatt tggtaaaaca aatagtttgg cattcgttca
     4501 ttattgctta atattacttg tgtaccatct gctccccgcg catattgaaa attaactaac
     4561 ttaacaattc ttgtatgatc accaaaaata atatgagcat cttgcgggtt taatatagat
     4621 ttttcatcat tggtaaatcc acaaataaaa tcttgacttt ggtcaacaac aggatatttt
     4681 ccaaaatcct taatatcttt atttaatatt tttgtagtat ttgggatttt tgctaagcaa
     4741 gattgtaatt ctatacttcc ccaccccttc ggaatttccc gtttcaaggt ttcatcaaac
     4801 acaatttcgc cgcctgagga tttgtagggc ttgccgttgg cgtcagggaa gtcgaactgc
     4861 acgaaccaat agtcgtacag ggttttcgcc atatcttcca ggcgcgcatt gatttgttta
     4921 ttcagggcga tttttttgtc caaagcggat aggacggcgg cgatggattg ttgggttttg
     4981 aggtcaggaa ctgcaaattt tagatttgca atatcatcag gatttatcga tggatatgat
     5041 gaaacactgt tctcgccaat tgtatgtaaa taatcagtga tatgcttttg agtcaataaa
     5101 tagtaaataa atttttcatc cgtattctca tcataaacat caattgtact aaaccctgtt
     5161 gatataatga aattatcacc aggattttcc aaaaaaccgt aatgctcctg atttgggcga
     5221 actgtagaat agataatagt cttatctttt acttttcttt ttgcacggct aggtatttta
     5281 tccatcatga cattcaaaac ttggatatta tctatttcat ttctagtaat attgccagta
     5341 tccaaataca tgatttcttg aaacatgtct ttttgagtga gggagttggc atttatttct
     5401 gcgatttcac caattgtaat ttgtcgtttc atcttaactt aatctctcga aactcttcaa
     5461 aggccgtctg aaaaaaattt caaaatccaa ccgcactttt attgtccact tcgaacgtat
     5521 gcaatacgcc cataaaggct acctaaaaaa ccgctttctc acatccgccc gctttctttt
     5581 aaatattccc gcaccaacag gcggttgatg gcttggatgt cttggggttg aacaggaaat
     5641 tgttgctccg ttctaaagcg ttttaatacg atgccctgca tttgtttttc aaagtaattt
     5701 tgattgtcca aaatctgctc catatccagc actttttggt cggcatcggc tttgacgccg
     5761 tttagagcgt taaaaacttt gagtttgtcg ccgtagaagg cggcgttttc catcagccgc
     5821 ttgtgggtgc gggcatactt agcgtcgccg ccgtatttgt gccgcaaaag gtcgttttgg
     5881 cggttcagct ctttgatttt ggcatagacg atttggagtg tggcgatgtt tgcctgcatt
     5941 tcttcttgcc cgacttcggc gaggttcttt ttcttgaaga tgcgttccag ctcttcgcgc
     6001 aggctgatgt attcggggtc gtcttggtcg aagttgcccg ccagcccttc acggactttg
     6061 cgcatgatgt cttttaaatc gtcggcaagt ttgagttccg cctcgccgat tttgacgaat
     6121 tgaaagtaaa cgtcttccag cgcttcattg agcaaatggg cggtgtcgcc ttgctgtaat
     6181 ttttcggcaa ggtttaaggt atccagacgg gcggcagttt cgcggtacag aaggttgagc
     6241 ttgtcaaaat ccagatgcac aagaaattcg tggctgcctt gcaggcgcag agcgttgtat
     6301 agctctttgg aagtttgcag ggcttttttt agggcgagaa gctgtttttt gtcttctatt
     6361 tggctaattt ggctgcaaaa ttcttcggcg ttttcggtat cgaaatcaaa cagggcgttt
     6421 ttaatgtctg caatttcctg ttcgatttct tcggcggttt tgaatagctg gctgtaactg
     6481 ccgatttcgt cgcccaattc gttagaaagt tcgtcccaat aggcgcggtt ggttttgtca
     6541 aattcgcgtt cgatgtcggc aaaatcgaca acatagccgt aacggtaaga tttgtaggtg
     6601 cggttgacgc gggtcagggt ttgtaaaagg ttatgggctt tgatgagtct gcccaaatag
     6661 agctttttca ggcgcggcgc gtcaaagccg gtcaaaagca tgttgtacac aaacaggatg
     6721 tcggttttgc ctgctttgaa atctttgacc cattggtcgc gttcgtcttt ggtgccgacg
     6781 tcgtgcaata tcagtgcggc ggtgaaatta tggtctgagg ccgtctgaaa atgctcaaaa
     6841 agctggcgcg cctgttctgc gctatcgcaa acgaccatgg cgccgaggct ctcgtcttgg
     6901 ttggtttttc tgaatttggc gaagtcgccc aagatgtaat cgagcatcgg gcggacgaaa
     6961 tgcggatggg cgtagatttc tttgcggtca aagctgcctt tttcgacttc aagctgcgcc
     7021 agtgcagcct gcaattgggc tttgtattgg ctgctgatgg cttcgcgaat caggcgcagg
     7081 gtgtagccgt cggcgatgga ggcgttgtaa tagtatttat ggatgtagtc gccgaagagt
     7141 tcgcgggtat tgacgttgcc tgcggttacg ccgataagcg gcgtgccagt cagcccgatt
     7201 ttgacggcgt ttacgtcgga ctggttgagg ttggcaagaa acgagccttt ggggttgtag
     7261 ctgcggtgta cttcgtcgag aaaatagacg cgctgaatgg cgaggtcgta gtcgttacga
     7321 gcgacgacat cggggtcgtc ttggaatttt tggatattaa caacagtgat ttccgctttg
     7381 cctgcgtggt tgtgcaaagt ttgggcggat ttgatgtcgg cagcaaaggc ttcgcggctg
     7441 tcgatggtat ggacgactaa atcgcgggca gtaaattcgc gctgcgcctg tttcaataaa
     7501 tcaagcctgt ccacgatgaa atagaatttc ggcacgatgc cctgtttggc ataatagtgg
     7561 gtcaggtagc gggtgttgta ataggcaagc gcggttttgc cagagccttg ggtgtgccaa
     7621 atcacgcctt ttttgccgcc gtttgccaaa tgtttttcaa tggcgagagt ggcaaatagc
     7681 tgcggatacc gcatgatgtg tttttgcacc aagccttgac ttgctttgac gtaagtcagc
     7741 ccgtgttgca gaagaaaaga aagacgttcg cggcaaagca gcgaagtcag gatgcggttg
     7801 gtcggcgtat cgggcgattt attgctgata aattcggggc tgtgtttgat aacgggcagg
     7861 ttgttgtctt gcaggacgtt gttttcgagg ccgtctgaaa gcgtgttcaa taattcggca
     7921 agatttaatt tatgttcttc gcggaagtag ttaaacacgg gcttaccgta agcagacgaa
     7981 gcgtaaaacg cgccttgtgc cggttcggtt gcgccgtcgt cgtattccat gttgttggaa
     8041 aaaatcatga attgggtgat gttgatgaaa cggcgaaatt tggaattttt cgcacgtttg
     8101 cccatgcgct cccgctcttc gccgattccg cctttgttgt tgggcttttt gacttcgata
     8161 aaaaccaaag gcatgccgtt taccagcagg gtaatgtcgg ggcggaattc ttcatcgccg
     8221 ttgatacagg gcaattcggt tacaacgtgg aagctgttgt tatcaaaatt ttggaagtcg
     8281 atcagtttct tgccgccgga ttgattggta aggcgttcgt aaaacttttg ccccaagtct
     8341 tcgttgtcca gttctaagcg tatgtcggtc agcaaacggc gtgcatcgtc cggcgacaaa
     8401 tcgggattga tgcggcagag gctttctata aagattttgg gaaagatgtt ggttggttta
     8461 tcccaatttt cgtttttgag cgagaggtag tcgtagccca agcgcatcag gtgcaaaacg
     8521 gcggggattt tgacgcggga attttcgttg tgagtttggg acataaacgt aatgattcat
     8581 caaaatttat tgaaacggat tataacacct gaaaaacccg atacgccttt ttggtgtacc
     8641 ggctttgcca taccgttctg cttcagacgg cattgcttca ttttgccttt aatgcctctt
     8701 catccagcga tttgagccac gccagctttt cgccgatttt gatttccaac ccgcgcggga
     8761 cgggttggta gaagtccggt tcgtccaagc cgtcgggcat atagctttcg ccggcggcgt
     8821 aggcgttcgg ttcgtcgtgg gcgtagcggt attcgcgtcc gtagcccaat tccttcatca
     8881 gcttggtcgg ggcgttgcgc aggtggacgg gcacttcgtc gctagcgttt tctttgacga
     8941 agtggcgcat ttggttgtat gccttgtagc ccgcgttgga tttcgcggcg gcggcaagat
     9001 acaataccgc ttgcgccaaa gccagttcgc cttcgggcga gcctaagcgt tcgaaggtgg
     9061 cggcggcatc gttggcgatt tggaaggcgc gcgggtcggc aagcccgatg tcttcccaag
     9121 cgatacgcac gatgcggcgg gcgaggtagc gcgggtcggt gccgccgtcg agcatacggc
     9181 agaaccaata cagcgcggcg ttcggatgcg aaccgcgcac ggatttgtgc agggcggaga
     9241 tttggttgta gaaactctcg ccgcctttgt cgaaacggcg gatttgcgcc ccgagactgt
     9301 cggcgagaaa ttcggcggtt aagtttttca gacgacgtgt atcggcggcg cgtaaaagtt
     9361 gttccaacaa attcaacaat ctgcgcgcat caccgtcggc ggtattcacg agtaattttt
     9421 gcgcatccgt ttcaatcgta aactcttggt attcaggcaa agccaatacc ttggcaatca
     9481 gctttttcag gtcgtctgaa gacaagggtt gcaaaacata cacctgagcg cggctcaaca
     9541 gcgcgggatt gacttcaaac gacggatttt ccgtcgtcgc accaataaag gttagcaaac
     9601 cgctttcgac atgcggcaaa aacgcgtcct gctgcgcctt gttgaagcgg tggacttcat
     9661 cgacaaacaa aatcgtcgcg cgtccctgct gcaaagcgat ttcggcttta tcgattgcct
     9721 cgcggatgtc cttcacgccg gaaaatacgg cggaaacagg caaaaactgg gcgttgaaac
     9781 tctgcgccaa aatccgcgcc aacgtcgtct tgcccacgcc cggcggcccc cacagcaaca
     9841 tagaatgcgg cttgccgcct tctaccgcca cgcgcaaagg tttaccttcg ccgatgaggt
     9901 gttcctgccc caccacgtcg tcaagcgtat gcggacgcaa tcgttcggca agcggcgcgt
     9961 cgggttctcg ggcaaacaaa tcggtcataa cggctccgtc aacaggtttt caaacaatat
    10021 gattatacgg cagggaacgg cggcgtgccg catacggatt ccgcccctcc gtttgcctta
    10081 agccgatatt aggcgcatac tggaaaagac gagagacttc acacaatata tccggcacgg
    10141 agaccgattc cgcatcggca tgacaatacc caaatcagcg tttcaattaa acattaagga
    10201 gactaaaata gaaaatttgc tttatctacc attgctttgt tgattcaatc ggcattatgt
    10261 tttgaggcgg aagcccatga atatactaat attcaagaga tggaatgggt gtctttattt
    10321 tctgatccgc aaagagacga tgatagtctt ataaccctta aagatgaaaa aatcactgta
    10381 aaaaactata ttgtgccttg gtggaaaaaa ggtgaaaact ttagaaaatt agaacttatt
    10441 accactggta aaaatgataa tggaaattta acggtaaatg gaatttacgg catccaatct
    10501 tttgcagact ctcaattggg atatacgcct gaattattgg taaaaagcaa taatgatatt
    10561 ctatttaaaa ataatctcca atctgttgac gtgaagcccc attccggaaa tatccatttg
    10621 gatgccaaag gaaaaattca atttaatttg aatgttcccg atgttgatgg ggtacaagat
    10681 gtagccagtg aaaaaaatac cgacaaacaa tagtgcctta gttcggtatg tcaacactat
    10741 cagccccccg atgaaaatga caaaggcagc atatcctttc attcaaaaac aggcaatttg
    10801 ttcaatatga acgttaaagt tcataaagac acacaccatt tcggtattca caacctcaac
    10861 aataccgatg ttcatctgac tgccgaagac agcgataatg tgattgagat taaaggggaa
    10921 ctcgccgacc ctatgccgac aggaaatgtt gagagtacaa gttttttaag gggcattgaa
    10981 acggctttta aatccaatac cgtattaacg gggaataaca ataaaatatc catcgccact
    11041 gagggcaagg gcttgggatt gggcgtaaat ggtctccagt ccaactcccc ctattccgga
    11101 cacacgacgg gcattttcat caataatcaa tcaagcgacc ttacccaacc ttcccttgat
    11161 ggcatcagca ccatcaaact caaagccgtc aagggaaata atgaagttga tttaaatgta
    11221 aaaaaccacg cctccgtaaa aggcattatc gcgtcgcatt ctgcaaaagc aacgcttgaa
    11281 gccgaagggg acaatattgt ccaggttaaa aatccggaca ccaatacggc tttaatcgat
    11341 gctttgaaaa aacaataccc caatgcttcg aaagaactat acagggtggg ggttcaatcc
    11401 acgactggaa cagtacgcat ttcgccaaac ggcaaaatcg cattaacgga attgaaaact
    11461 tttggaattg tacaaaacgg catttgcgtc a
//
LOCUS       DBBZYD010000067        11364 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.067, whole genome shotgun sequence.
ACCESSION   DBBZYD010000067 DBBZYD010000000
VERSION     DBBZYD010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11364
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.067"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..573
                     /locus_tag="ACJJDL_001472"
     CDS             <1..573
                     /locus_tag="ACJJDL_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224706.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HGG7574165.1"
                     /translation="DLGKLSPEAQLAAASLLQDSAFAVKDGINSARQWADAHPNITAT
                     AQTALAVAEAAGTVWRGKKVELNPTKWDWVKNNGYKTPAARPMQTLDGEMAGGNKPVV
                     KSIRPTTRDELRQALQEQGFRRTGSDEAQYETWKGPDGVKIDIRPNGEVIRTQRVPRT
                     DGVQGKYPQRQNYEGNPLPNNRHHSGYFIK"
     gene            570..887
                     /locus_tag="ACJJDL_001473"
     CDS             570..887
                     /locus_tag="ACJJDL_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574166.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            957..1250
                     /locus_tag="ACJJDL_001474"
                     /pseudo
     CDS             957..1250
                     /locus_tag="ACJJDL_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            1245..1697
                     /locus_tag="ACJJDL_001475"
     CDS             1245..1697
                     /locus_tag="ACJJDL_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574167.1"
                     /translation="MQTKALGTVDEIGDTVQQVGKQASGQKTSGGNPAIDSDPYSPSS
                     VAARIETGKVRSDLQIKDILSNTTQRSKTKGPAVQYDKVGDYNDALNDFNSLNVRNVQ
                     TRPNGTITGNLPDRRAVNARNDSSGGEPTLEITISNNRKIKIRYGNTR"
     gene            1701..2102
                     /locus_tag="ACJJDL_001476"
     CDS             1701..2102
                     /locus_tag="ACJJDL_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574168.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            2261..2603
                     /locus_tag="ACJJDL_001477"
                     /pseudo
     CDS             2261..2603
                     /locus_tag="ACJJDL_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2637..2738
                     /locus_tag="ACJJDL_001478"
     CDS             2637..2738
                     /locus_tag="ACJJDL_001478"
                     /inference="COORDINATES: protein motif:HMM:NF018014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574169.1"
                     /translation="MDDIRGIIQGAVNPLIYKVSKQKIIYNKLISGT"
     gene            2743..3099
                     /locus_tag="ACJJDL_001479"
     CDS             2743..3099
                     /locus_tag="ACJJDL_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HGG7574170.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNKKTVIFHF"
     gene            3147..3275
                     /locus_tag="ACJJDL_001480"
     CDS             3147..3275
                     /locus_tag="ACJJDL_001480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574171.1"
                     /translation="MPQTWGEAIQFRIKKQIENELAPPNWSTQFPNGSIYDPKVTK"
     gene            3272..3646
                     /locus_tag="ACJJDL_001481"
                     /pseudo
     CDS             3272..3646
                     /locus_tag="ACJJDL_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3684..3946)
                     /locus_tag="ACJJDL_001482"
                     /pseudo
     CDS             complement(3684..3946)
                     /locus_tag="ACJJDL_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(4026..4553)
                     /locus_tag="ACJJDL_001483"
                     /pseudo
     CDS             complement(4026..4553)
                     /locus_tag="ACJJDL_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684692.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
     gene            complement(4602..5588)
                     /locus_tag="ACJJDL_001484"
     CDS             complement(4602..5588)
                     /locus_tag="ACJJDL_001484"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HGG7574172.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            complement(5628..6428)
                     /locus_tag="ACJJDL_001485"
     CDS             complement(5628..6428)
                     /locus_tag="ACJJDL_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HGG7574173.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALDLPVVRHPEAAKFIEG
                     ITQKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLNTYYADRFNQTERGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            6553..7896
                     /gene="argG"
                     /locus_tag="ACJJDL_001486"
     CDS             6553..7896
                     /gene="argG"
                     /locus_tag="ACJJDL_001486"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HGG7574174.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIEPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKK"
     gene            7971..8099
                     /locus_tag="ACJJDL_001487"
                     /pseudo
     CDS             7971..8099
                     /locus_tag="ACJJDL_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
     gene            8244..8372
                     /locus_tag="ACJJDL_001488"
                     /pseudo
     CDS             8244..8372
                     /locus_tag="ACJJDL_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
     gene            8365..8580
                     /locus_tag="ACJJDL_001489"
     CDS             8365..8580
                     /locus_tag="ACJJDL_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574175.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(8655..9935)
                     /locus_tag="ACJJDL_001490"
     CDS             complement(8655..9935)
                     /locus_tag="ACJJDL_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7574176.1"
                     /translation="MFERSVIAMACIFALSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNAGNTAAQGTNQAENNQVGGSQNPAPSSNPNATNGGNFGRVDLANGVLIDGPSQNI
                     TLTHCKSDSCNGDNLLSEEAPSKSEFEQLSDEDKIKKYKKDGEKFTGLVADRLQMKGT
                     NQYIIFYKPKTTSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNI
                     FAPEGNYRYLTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHTENGRSYP
                     TKGRFAAKVDFGSKSVDGIIDSGDDLHMGKQKFKAAIDGNGFKGTWTENSGGDVSGKF
                     YGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(10047..11276)
                     /gene="sstT"
                     /locus_tag="ACJJDL_001491"
     CDS             complement(10047..11276)
                     /gene="sstT"
                     /locus_tag="ACJJDL_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HGG7574177.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
BASE COUNT         3089 a         2670 c         2617 g         2988 t
ORIGIN      
        1 gatttaggaa aattaagtcc ggaagcacaa cttgctgccg cgagcctatt acaggacagt
       61 gcttttgcgg taaaagacgg catcaattcc gccagacaat gggctgatgc ccatccgaac
      121 attacagcta ctgcccaaac tgcccttgcc gtagcagagg ccgcaggtac ggtttggaga
      181 ggtaaaaaag tagaacttaa cccgactaaa tgggattggg ttaaaaataa cggctataaa
      241 acacctgctg cccgccctat gcagacgttg gacggtgaga tggcaggagg aaacaagcca
      301 gttgttaaat ctatcagacc aactacgcga gatgaattac gtcaagcatt gcaagaacaa
      361 ggttttagac gtactggttc agatgaggct caatatgaaa catggaaagg tcctgatggc
      421 gtgaaaatag atattcgtcc aaatggagag gttataagaa cccaaagagt gccgcgaacc
      481 gatggtgtac agggaaaata tccgcaacga caaaattatg aaggcaatcc attgccaaat
      541 aatcgtcatc attctggata ttttatcaaa tgaaaaaaaa tatttttcac aatgtaagcc
      601 tttatgaaat aatcttttcc gataatggaa atacccttac attatctttt acagatacaa
      661 ttgaaggtaa ttatttcgga tatatcaaat gcagtaatat tttgaatttt aaattagata
      721 caaataattt cgtagattat gaggataagg aagatagctt gtttcccttg tttatacccg
      781 aaatagagct atataaatac caattttata gtgaaattat tattgatgta gggattatta
      841 taaaaatatc tgctgaaaca attaattttg agccactggg aaaatagtaa ctgctttccc
      901 agcagccgta gcaactgtat ttttacccga cggggtaaaa atacagttgc tacatctctg
      961 cgcagcagac tctacaaggt attaataatt taggaaaatt aagcccggaa gcacaacttg
     1021 ctgccgcgag catattacag gacagtgctt ttgcggtaaa agacggcatc aattccgcca
     1081 gacaatgggc tgatgcccat ccgaatataa cagcaacagc ccaaactgcc cttgccgtag
     1141 cagaggccgc aggtacggtt tggagaggta aaaaagtaga acttaacccg accaaatggg
     1201 attgggttaa aaataccggc tataaaaaac ctgctgttcg ccatatgcag actaaggcgt
     1261 taggtacggt agatgaaatt ggcgatacag tacagcaggt tgggaaacag gctagcggac
     1321 aaaaaaccag cggtggtaat cctgcgattg atagcgaccc ctatagcccg agtagtgtgg
     1381 cagctcgcat agaaaccggt aaggtgcgca gtgatttaca aatcaaagac attttgagca
     1441 atactactca aaggagtaaa acaaaaggtc ccgctgttca gtatgataaa gtgggggatt
     1501 acaatgacgc actaaatgat tttaatagtc tgaatgttcg aaatgtacaa acacgtccta
     1561 atggaacgat aacgggcaat ttacctgata ggcgtgcggt taatgctcgt aatgatagta
     1621 gtggtggaga accaacactt gaaataacaa ttagtaataa ccgaaaaata aaaatcagat
     1681 atggaaatac acgataaatt atgaaattaa aaagcttaga tttcccaact ggctatttct
     1741 attttgataa tgcagcaata aactctgata aagtagaagt tatagcagtt ggttatagaa
     1801 atacggataa aaccataaaa atttttattg aagatgttat tcattttagg gttgttgatg
     1861 aatcgtattt tatagatact tttatggatt taatttcgga agatgcagat agagctttgc
     1921 ttcatgaaaa tggtggtcaa tctttttttg aacttcttga tgagtgttat gcggaatgga
     1981 tattgaaaga aagttatttt cctttgaata gagaattctt taaatactat atttttatgt
     2041 ttgagcaaac attcatagaa ataattggtt ctagtgcaac gtattcaatt attgagggct
     2101 agcgtaagat gagtaataag ttgcctatct ttctttcagg cagcctgaaa ataaaactac
     2161 ccaagttgat ggtgtacctg tatcagtgaa gggaaatttt gttgatggta aatttcgcat
     2221 tggtacggca acaatgaaat cattttaaat tgagctagaa atgaacctag aaaattatga
     2281 aaacatttta ataaaattac ttttttatca taacaactta gtaaatgaat attcttattt
     2341 tattgaaaat aaaaatttat ttaaaatagt atctcgaact aaaacgagta agggcttttt
     2401 ttcactatag aaaaaccatt aaattttcta agcaaaaaaa cttattttga gtttaatttt
     2461 aaatatttac actcagggaa agaacgcttt ggttcgttta tgtgctggat aaatactaat
     2521 ttaatggaat ttgagggggt ttttttaacg acctgctccc tgataatatg ataataaata
     2581 acttttttga aataaatgat taacgataca ccaataaaaa ttggtggggt aaccgtatgg
     2641 atgatattcg cggcatcatc caaggtgcgg ttaatccttt aatttacaag gtaagcaagc
     2701 aaaagattat ttacaacaaa ctcatatcag gaacttagac aaatgaatga acacaacctg
     2761 ttaattttct gtttaaaaga caatgtttca attagtgaat atactgaaat gattgattgg
     2821 gcttataaaa atattcaatc tgaaacagtt gtagaaatta cggaaagtca aattattgaa
     2881 tatcaaaatc gtggattatg gagacttgtt tctgaaatta ccgataattg gttatttgga
     2941 ccaagtgagg gggattggct aatagataag gaaagtattt tggctgtaaa agaaaaatta
     3001 caaaattcag atttttctac agagccctta gtgaaaaata ttattcatgt acttgaatat
     3061 gctataaaaa ataaaaaaac agtaattttt catttttgag actaatccaa tttttagtaa
     3121 tattgatgca gagcaagcag cattagatgc cgcaaacatg gggagaagct attcaattta
     3181 gaattaaaaa acaaattgaa aatgaactag caccaccaaa ttggtctacc cagtttccta
     3241 atggtagtat ttatgatcct aaggtaacga aatgattatt caaaatgaat ttaatttata
     3301 tcctagtaat atgcttcctg aaaggttttg ttatcctgaa aagtatgttc gtatctctaa
     3361 cgatacatct ttaatacctt atattcagcc acataatttt cactggtagt ttgagaatta
     3421 tggaacagaa ggggcagaag tagcttatat atttagaaat tctatcctgc ctgatttaaa
     3481 tcttatccca ttcgctagta atggagaatg ggaagcttat tttgatggta atgatgtaac
     3541 aggaaattct agggttattg tcattaattt agataatata gaaaaccatg aattttttaa
     3601 tagttttgaa gattggcttg aattagcaat taaggatact tggtaagcag ctatctataa
     3661 agagatgagg ctgccttgga caactaggat aaactcgatt ttactaattg ttttaaaatg
     3721 gaacaagaac ttttatttca ctgttgttaa aacgccattc gcactccttt aaatacagct
     3781 caaaatgcgc tttgggaatg ccgttaaact tgcgtaaatg acgttttgct tgattccaaa
     3841 agttctcagt tccattaata tggttttgtc gttcggcaaa atgtgtgctg tgattgatac
     3901 ggaaatggct aaattcgccc gcatccaata catcatagcc acgataacaa aatgagttta
     3961 ttttgtttat accgtcttag acgactttct ctcataggga taattctaac ttaatttgaa
     4021 tttccctagt gatctagggc agcccctaaa ttaataaagc agcacaactc cttttgccga
     4081 tgttccggac tgtcaaacga ctgttcctca tgccacatct ccatcaaggt acggataacc
     4141 cgctccgcct taccgttggt ctgcggacaa gcaaatcggg caagcctcca accaatccca
     4201 ttattataac aagctgcacc gaaagcatgt tggacggctc tttatattac ctatcattgt
     4261 cagagtaaac gtactcaatc aggtacaagc aggggtcagc cagatgttcg gtcagaaact
     4321 tggcagcact gtctgcggtt ttgtccggca aaatggcaga gtataaaaat cgtcaatagc
     4381 gacaaacagg taatctcgtt tatcggcggc cttctgtcct ttgagcaaca acaaccgatc
     4441 ggtatcagga tgaacaaaac ctcccgggac aacctgcctt ttacggcttt aagtgcacgg
     4501 taaatagtga cgcggctgac ttagtggcag catactgggg aggtgagtgt ttttgtgtat
     4561 atttttattt tggtattccc ttagaaatac tgtaaacaac gctaccggac ggcctgcagg
     4621 gcttcgcgca cgcttgcttt gagttctgcg ccgaagcgtc tgcccaagat tctgccgaaa
     4681 tcgtccttcg gagtgtaatc caccacatcg ggggctttga ccacgtctcg cgccacgctg
     4741 taaatattgc cgagtccgtc caccagcccg actttcagcg catccgcgcc tgtgtacacg
     4801 cgaccgctga acacgtcggg atattgtcgg aatttgaggc ggccgccgcg tccggttttg
     4861 acggctttga tgaactcacc gtgtatgccg gtcagcattt cttcccagat ttttgactgt
     4921 tcgggcgttt cgggcgaaaa cggatcgccc atgcctttgt tgctgcctgc aattttaacc
     4981 ctgcgtttca cgccgatttt ttccatcagg ccggtcgcgt cgaaactgct gccgataacg
     5041 ccgatgctgc cgacgatgct ggacgggtcg gcatagattt tgtccgccgc cgccgcgatg
     5101 tagtagcagc cggacgcgca catatcttcc gccacgagat aaacgggaat gccggggtgc
     5161 tgcgccttca gacggcgtat ttcttcaaaa gcggtgttgg agacgacggg cgaaccgccg
     5221 gggctgttgg cgcggatgac gatggctttt gcctgcgggt ttttgtaggc ggcctccata
     5281 ccgtctttga gttttttgac ctggtcttct acaccgttgc cgatttcgcc gtacaggttg
     5341 acgactgcgg tatgcggcgt gttgcccgcc aactgcaatg cggcttcgtc ttttcggaaa
     5401 atgcctgcaa tcagggcaac cagaatcagg gtgctgacgg cgcgccagat gtttttccac
     5461 atccgctccc tgcgcctgtc ctgataggcg gacagcagca cttcgcgcat gatgtcgcgc
     5521 tcccataagg tttcccccgc attttttgct tcgggtgctt cgttttctct tctgattcgg
     5581 tattgcatgg ttttccttaa atattgtccg atttgggcaa acggttttca gtttacccga
     5641 tttttcagct ctgctcccaa tccgtccaag ctgtgcaaca cttccgccca cgccgcgtcc
     5701 aaaaggttga cggcttctcc ttcggctttg atgccgaact caatgtgcgg tttgacctgc
     5761 gtgccgtctg aatgcgtcca accgacgctg ggcaggctgt acgaacgcac accgggataa
     5821 gtttgctcga tatgctccat aagcggcgta atgcgcgatt cgggctgctc aaacacatac
     5881 acgctgcggc tgccgcgttc ggtttggttg aagcggtcgg cgtaataagt attcaaaacc
     5941 cattccgcca tcgggtgcgc catcacagga aagccgggga agaaataatg ctcgcggatg
     6001 gaaaatccgg cgatgttgtt gaacgggttg ggcacaagct ctgcgccctc ggggaaatcc
     6061 gccattttca ggcgttgggc gtgttccggc gaatcaagcg gctcgccgcg tttctgggtt
     6121 atgccttcga taaacttggc ggcttcagga tggcggacga caggcaaatc caaagcagca
     6181 gccgcggctt ggcgcgtgtg gtcgtcgggc gtggcgccga tgccgccggt aacaaacgtc
     6241 ggtatgccgt ctgaaaagct gcggcgcagt tgcctgacca gtaaatcggg ttcgtcgggt
     6301 agatattgca cctgattgag cttcagccct ttggattcga gcagggattt gaaaaaggcg
     6361 aaatgcttgt cttggcggct gccgtgcagg atttcgtcgc cgatgatgat gaggttgaac
     6421 gcgttcataa tgttttcggt tttaaatacc gcctgaaacg gcggaatacc cgttcagacg
     6481 gcatgatggc tgacaatatt tcctatttat aagataatgg ctttgatttt tcaagctacc
     6541 gaggattttt tcatgaacca aaaccatact attttacaaa atctccccgt cggtcagaaa
     6601 gtcggcatcg ccttctccgg cggacttgat acctccgccg cgctgttgtg gatgaaactc
     6661 aaaggcgcgc tgccttatgc ctacactgcc aacctcggcc agcccgacga agacgattac
     6721 aacgccattc ccaaaaaagc gatggaatac ggcgcggaaa acgcccgctt aatcgactgc
     6781 cgcgcgcagt tggcacatga aggcatcgcc gccatccaat gcggcgcgtt ccacgtttcc
     6841 accggcggca tcgcctattt caacaccacg cctctgggcc gcgccgtgac cggcaccatg
     6901 ctcgtttccg caatgaaaga agacgatgtg aatatttggg gcgacggcag cacctacaaa
     6961 ggcaacgaca tcgagcgttt ctaccgctac ggtttgctca ccaatcccgc gctgaaaatc
     7021 tacaaaccct ggctcgatca gcaatttatc gacgaactcg gcggccgtca cgaaatgagc
     7081 gaatttctga ttgccaacgg cttcaactac aaaatgtcgg tggaaaaagc ctactccacc
     7141 gattccaata tgttgggtgc cacccacgaa gccaaagact tggaattttt gaactcgggc
     7201 atcaaaatcg tcaaacccat tatgggcgtt gccttttggg acgaaaacgt cgaaatcgaa
     7261 cccgaagaag tcagcgtacg ctttgaagaa ggcgtgccgg ttgcactgaa cggcaaagaa
     7321 tacgctgatc ccgtcgaact cttcctcgaa gccaaccgca tcggcggccg ccacggtctg
     7381 ggtatgagcg accaaatcga aaaccgcatc atcgaagcca aatcgcgcgg catctacgaa
     7441 gccccgggaa tggcgttgtt ccacatcgcc tacgaacgct tggtaaccgg catccacaac
     7501 gaggacacca tcgaacaata ccgcatcaac ggcctgcgcc tcggacgttt gctctaccaa
     7561 ggccgctggt tcgacagcca agccctgatg ttgcgcgaaa ccgcccaacg ctgggtcgct
     7621 aaagccgtta ccggcgaagt taccctcgaa ctgcggcgcg gcaacgacta ctcgattctg
     7681 aacaccgaat cgcccaatct gacctaccaa cccgaacgcc tgagtatgga aaaagtcgaa
     7741 ggtgcggcgt ttaccccgct agaccgcatc ggacagctca cgatgcgcaa ccttgacatc
     7801 accgacaccc gcgccaaact gggtatctac tcgcaaagcg gtttgctctc gctgggcgaa
     7861 ggctcggtat tgccgcagtt gggcaataag aaataaggtt tgctgttttg catcattagc
     7921 aacttaaggg gtcgtctgaa aagatgatcc cttatgttaa aaggaatcct atgaaagaat
     7981 acaaagtcgt catttatcag gaaagcctgt tgtccagcct gtttttcggc gcgacaaagg
     8041 tcaaccccgt caatttcagc gcgttcctca acaaacaaac ccccgaaggc tggcgggtcg
     8101 agacctttgc aataacatag gttactaaaa ttttatgctc aatctcattt tcaaaatgca
     8161 aaacttttct gatttttcct actttttgct caatattagg aaggttttag gcaattgaaa
     8221 attttttggc gcatttttat gcgtcaaatt tcgttaacag actatttttg caaaggtctc
     8281 gggtcgtaac gatggaaaaa gatttgcgcc gtatgctgct gtttttcaaa cgcgaggcct
     8341 acgtcgtcat tttggagcgg gaccgtgttt aagctcggcg tttatgcctg tctcggactg
     8401 tttgccggct gggtgctgct gctgattgtg caactttggt tttcttttct cgaagcggaa
     8461 ttgtttttca aaatcactct gactatggcg ggactgtttg tcatcatcct cgctgccctg
     8521 ctggtattcg gccagtattt ttccgaaaag aaaatgaaag acgacgggtt tatcaactga
     8581 tgcggacttg aaccggaccc caccccaaac atcacaatgc cgtctgaacg cccccgcttc
     8641 aggcggcatc agcatcaatc ctgctctttt ttgccggcaa acacgccgaa tccgcccttt
     8701 tccgcatctg tcgggcgata gctgtatttt cccgccactt cttcgccggc cgggccgtaa
     8761 aactttccgg aaacatcccc gccgctattt tccgtccaag tccccttaaa gccgtttcca
     8821 tcgatggcgg ctttgaattt ttgcttaccc atatgcaaat catcgccgct gtcgataatg
     8881 ccgtccacag atttgctgcc gaaatcgact tttgcggcaa acctgccttt ggtcgggtac
     8941 gaacgtccgt tttccgtatg gaaatgcagc acttcgccgt tgtacacggc cgtgccagca
     9001 agcatttcgc cttttgccgg ttcgccttgc acactgaggg catacgatcc gccggacaat
     9061 ttttctgccc cgtaagtcag ataccggtaa ttcccttcgg gcgcgaagat attgccggaa
     9121 tgccccgtca ggctgaccgc ttccccatcg acaatcagcg tatccgcctg attgacgggg
     9181 atcagcggca tctcagccgg aagcgacctc ctagaccgtg cagaacgcct gaatcgcgca
     9241 gatgaagtgg ttttaggttt gtaaaaaata atatattgat tggttccttt catctgtaac
     9301 ctatcagcaa ccaaaccggt aaacttttct ccatcttttt tatatttctt aattttgtct
     9361 tcatcactta attgttcaaa ttctgatttt gacggtgctt cttcgcttaa tagattatca
     9421 ccattacaag aatcgctttt acaatgggtc aacgttatat tttgcgacgg tccgtcaatc
     9481 aaaacaccgt tagccaaatc aacccttcca aaattgccac cattcgtggc attaggattg
     9541 cttgaagggg caggattttg agagccgccg acttgattgt tttcggcttg atttgtacct
     9601 tgggcagccg tattgccggc attttgcggc atatcatttt gcggtccctc gtcttcattt
     9661 ttgggtttgt ccgttgttgc cgcaccgcca ttgcctgtat tttctgccga aactgccgcc
     9721 atatcttggc tgccttgtgt ggatggcgcg ccctgtcctt gagaacctgc ctgtggcgca
     9781 tcttctttta cctctgtctc tttttcagca acaacaggag cggccggttt tgacggtgtg
     9841 tccgccgact taacatcggg cgatccgcca ccgccgcccc cacaggctga aagggcaaaa
     9901 atacaagcca ttgcaatcac actgcgttca aacatcatca tctccttcat attcaaggca
     9961 gccggtattg tttccgccat atgcccataa aattgtaaaa atatgccgtc tgaacgccaa
    10021 atgggcttca gacggcatag cttggtttat tccgcccggt ttctctgtcg gcccaaatcg
    10081 gcagcagcgg taaacaaaac gtcggttgaa gaattcaacg ccgtttccgc cgaatcctga
    10141 atcacgccga tgataaagcc gacggcaacc acctgcatgg cgacatcgtt gctgatgccg
    10201 aacaggctgc acgccagcgg aatcagcagc agcgaaccgc ccgccacgcc ggacgcgccg
    10261 cacgcgctga ccgtcgccac caggctcaac agcagcgcgg tggcaaaatc aacctgtatg
    10321 ccttgggtgt gcgccgccgc catagccaaa acggtaatcg taatcgccgc gccgcccata
    10381 ttgacggtcg cccccaacgg gatggaaatc gaataagtgt cttcgtgcag ccccagtttt
    10441 ttcgccaaag ccatattcac ggggatattg gcggcggaag aacgggtaaa gaaggcatac
    10501 acgccgcttt cgcgcaggca ggtaaacacc agcggataag ggttgcggcg gattttccac
    10561 cacacgatgg cgggattgac cactagcgcg ataaacgcca tacagcccaa cagcaccgca
    10621 agcagcttcg cataacccgc cagcgcgccg aaacccgtct ccgcgattgt ggacgacacc
    10681 agcccgaaaa tgcccaaagg ggcaaaacgg ataatccatt tcacgacggt ggaaaccgct
    10741 tccgccaaat cggcaacgac ctgccgcgta acgtccgaac cgtgattccg caacgccgcg
    10801 cccaaaacca aagcccaagc cagaatgccg atatagttgg cattggcaat cgcgttaatc
    10861 gggttggcga ccaggttcat cagcagcgat ttcaacactt ccacaatgcc ggaaggcggc
    10921 gcggcggaca catcgcccgc gcccgccaaa acaatgtgcg tcgggaaaac cataccggcg
    10981 atgacggcgg tcagggctgc ggaaaacgta ccgatgaggt aaaggacgat aatcggcctg
    11041 atatgcgcct tgttgccttt ttggtgctgc gcgattgtgg ccgccaccaa aataaatacc
    11101 aaaaccggcg cgaccgcttt gagcgcgccg acaaacaggc tgccgaacaa gcctgccgcc
    11161 aagcccagtt gcggggaaac cgaaccgatt acgatgccca acgccaaacc ggcggcaatc
    11221 tgcctgacca ggctgacgcg gccgatcgca tgaaataagg atttgccgaa cgccataatt
    11281 cttccttatg ttgtgatatg ttaaaaaatg ttgtatttta aaagaaaact cattctctgt
    11341 gtttttttat ttttcggctg tgtt
//
LOCUS       DBBZYD010000068        11169 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.068, whole genome shotgun sequence.
ACCESSION   DBBZYD010000068 DBBZYD010000000
VERSION     DBBZYD010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11169
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.068"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            356..2236
                     /locus_tag="ACJJDL_001492"
     CDS             356..2236
                     /locus_tag="ACJJDL_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HGG7574178.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFGPEELDALDGALQKGWQ
                     KGLHSVLFADYEFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDDLPAGIST
                     PQSSVSETDYLDRIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLNIASDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIQAQALPNTSF
                     ADILRAAFPCGSITGAPKKMSMQIIESLETEARGLYTGSIGYLKPCAGGLGFEGIFNV
                     VIRTLSLKPVSASDGIVSGIGGPDSNAQARTAGQGGATPHPFDSNPPYRGVYGVGSGI
                     VIDSDPAAEYRECGWKARFLNELRPDFGIFETLRAENGRCTLLDRHLCRLKTSAQALN
                     LPLPDGCENQIKQYIADLPDGAFRVKALLASDGISLSRAVLNRLTDKQRVIISPTILP
                     AQNYLRRFKTTCRTVFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKYQGQWLT
                     PSLDLDILNGIMRQAVLDEPQKYLQTNQVIETHITQKTLQEAEEIRLSNALRGVFAAA
                     LA"
     gene            complement(2295..3812)
                     /locus_tag="ACJJDL_001493"
     CDS             complement(2295..3812)
                     /locus_tag="ACJJDL_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7574179.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRLVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGIAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            4720..5799
                     /gene="hupA"
                     /locus_tag="ACJJDL_001494"
     CDS             4720..5799
                     /gene="hupA"
                     /locus_tag="ACJJDL_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupA"
                     /protein_id="HGG7574180.1"
                     /translation="MKYKALSLLPLAAALAACAGGGVAEPHVPVSIPTATPLTGEVKL
                     SSDNSKIENINTANTETHPPRRTRRSLYASPQNTSSGISIQQREVEKIYFGVKSPEKS
                     FIFQTPGGAQYALSSYADPIVPSYSSPDFKIPDRHAGQRLADGSRIFICCSDSGATSY
                     AEITKQDYMKFGAWIGPNGEIDLFAGGFPVGKTPPPAFSYGNSTPETALSKGKITYQV
                     WGIRVKDGQFVTSSYTPPKGSSFTGYTNTPVLSFITANFNSNKLAGEIRGNSDYGPSV
                     KIENATISGPSFSGNATSGGKTGNLEGKFFGKFNGSYGNTETSIGGKITFKDDRSLDT
                     VFGGVSYVKKLDETANRDTEHLTKQ"
     gene            5827..8253
                     /gene="hupB"
                     /locus_tag="ACJJDL_001495"
     CDS             5827..8253
                     /gene="hupB"
                     /locus_tag="ACJJDL_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HGG7574181.1"
                     /translation="MSIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVKIENKGYVFSPTQSFSKYQTYVATGVARSQPDPQEWVNKSTLFKLGY
                     NFNDRNRIGWIFEDSRTDRFTNELSNLWTGTIYSPATGDYRHRQDVSYRRRSGVEYKN
                     ELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINSEVYHSFRHIRQNTAQWTAD
                     FEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFVKLYDPKIFTSNQAKITMLIESRSK
                     YKFAYWNNAFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHAG
                     FSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAETAKNF
                     ELGLAGSGKAGNFKFSGFQTRYRNFIELTYMGVSSDKPNSPNYAPISDGTALVSSPVW
                     QNQNRSSAWVKGLEFNGTWNLDSIGLPQGTHAGVNVSYIKGKAKQTNGQETPINALSP
                     WSAVYNLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDL
                     SAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGR
                     SYNFTIEAKF"
     gene            complement(8861..10495)
                     /gene="groL"
                     /locus_tag="ACJJDL_001496"
     CDS             complement(8861..10495)
                     /gene="groL"
                     /locus_tag="ACJJDL_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HGG7574182.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAIESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEEKPAMPDMGGMGGMGGMM"
     gene            complement(10589..10876)
                     /locus_tag="ACJJDL_001497"
     CDS             complement(10589..10876)
                     /locus_tag="ACJJDL_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HGG7574183.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVE"
     gene            11089..>11169
                     /locus_tag="ACJJDL_001498"
     CDS             11089..>11169
                     /locus_tag="ACJJDL_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7574184.1"
                     /translation="MLPSKYEDNALQIKEKSTERAAPFFCT"
BASE COUNT         2751 a         3390 c         2596 g         2432 t
ORIGIN      
        1 agccgcagac agtacaaata gtacggaacc gattcacttg gtgcttcagc accttagaga
       61 atcgttctct ttgagctaaa gcgaggcaac gctgtactgg tttttgttaa tccactatac
      121 ttggagctgg tcttgctttt cgcctaattc tacgttttca aacggttgca gctggtggtc
      181 tgtcataaag gtctccttat tgtatttcag gttggaaatc ggaatttgtt ttcacaattt
      241 tacaccttcg ccccccactt tctctacata aaattacatt ttgccgatat ttgccgaatc
      301 gtctgaaaat atgtgtaaaa agagcgtata atcaaaacat ttgccccgaa ttgccatgcc
      361 ctatttcgcc ctgtttgacg atgccgtaag cggccgcgca aaacgctatc aaaatcatgt
      421 agaaagccgt tttttcggtc ccgaagaact cgatgctttg gacggcgcgc tgcaaaaggg
      481 ctggcaaaaa gggttgcatt cggtgttgtt tgcagactac gaattcggtt tgccgctgac
      541 gggggttgag tccgagcgcg gcggcaacct tgccctgcac tggtttgccg actgcgccga
      601 caccgatgcc gcaagctggc ttgcccgaca ctcagacgac cttcccgccg gcatttccac
      661 gccgcaatcc tccgtatccg aaaccgatta cctcgaccgc atccgccaaa tccacgaagc
      721 catccggcgc ggcgacacct atcaaatcaa ctacaccacc cgcctgcacc tgcaagccta
      781 cggcaatccc gtcagcctct accgccgcct gcgccagccc gtcccctatg ccgtcttgtc
      841 ccacctgccc gatgcggagg ggcaatccgc gtggacgctg tgtttctcgc ccgaactctt
      901 cctcaacatc gcttcagacg gcaccatcag caccgaaccg atgaaaggca ccgcgccgat
      961 tttgggcgac ggacaagacg aacgccgcgc cgccgaattg caagccgacc cgaaaaaccg
     1021 cgccgaaaac gtgatgattg tcgatttgct gcgcaacgac ctcggcaaaa tcgcccaaac
     1081 cggcaaagta tgcgtgcccg agccgtttaa agtgtcgcgt ttcggcagcg tttggcagat
     1141 gaccagcacc atccaagccc aagccctgcc aaacacctcg ttcgccgaca tcctccgcgc
     1201 cgccttcccc tgcggcagca tcaccggcgc gcccaaaaaa atgagtatgc agattatcga
     1261 atcgctcgaa accgaagcgc gtgggcttta tacgggcagc atcggctacc tgaaaccttg
     1321 cgcgggcggg ttggggtttg aaggcatatt caacgtcgtc atccgcacct tgtcgctcaa
     1381 acccgtttcg gcttcagacg gcattgtttc aggcatcggc ggcccggatt caaacgcgca
     1441 agcccgaacg gcagggcaag gcggggcaac gccgcatccg tttgactcca atccgccgta
     1501 tcggggcgtg tacggtgtcg gttccggcat cgtcatcgac agcgaccccg ccgccgaata
     1561 tcgcgaatgc ggctggaaag cccgtttcct caacgaattg cgccccgact tcggcatttt
     1621 tgaaaccctg cgcgcggaaa acggacgctg caccctgctc gaccgccacc tatgccgtct
     1681 gaaaacctcc gcccaagccc tcaacctgcc cctgcccgac ggctgcgaaa atcaaatcaa
     1741 acaatacatt gccgacttgc ccgatggcgc gttccgcgtc aaagccctgc tcgcttcaga
     1801 cggcatcagc ctgtcccgcg ccgttttaaa ccgtctgacc gacaaacaac gcgtcatcat
     1861 ttcgccgacc atcctgcccg cacaaaacta cctgcgccgc ttcaaaacca cctgccgcac
     1921 cgtcttcgac caagcgtggc aaaccgccga aacacaaggc gcgttcgaca gcctgttttt
     1981 caattcagac ggcatcctgc tcgaaggcgg cagaagcaac gtgttcgtca aataccaagg
     2041 acaatggctt acgccctctt tagatttaga cattttaaac ggcataatgc gccaagccgt
     2101 attggacgaa ccgcaaaaat atttgcaaac aaatcaagta atcgaaacac acatcacaca
     2161 aaaaacactg caagaagccg aagaaatccg cctctccaac gccctgcgcg gcgtatttgc
     2221 cgccgccctt gcctgaacgc gcaaaaatgc cgtccgaacc tgtttccaaa gttcggacgg
     2281 cattatccca ccattcaaaa ccgccaatcc gccgacacaa acacctcgct gttgcggcgt
     2341 ttcgcatacg gcacattact ttccgtcctg ccgaaacgat aattcaacgc cggcacgata
     2401 cctttgtacg acaacttgtc gtggctcaaa gccagcgaga cattccattc gcggttgcgt
     2461 tgcgcctctg tcgagaaagc cgcaatgccc ttatagttgc ggcgggcata agacgcagaa
     2521 acccgactgt tcaaaccgcc caactgccgc cactcctgcg cccaaccggc ataaacaccg
     2581 ttgcgccggt aggcggcatt attgaccgcg ccgcccaccg tttcgcgttt cggcacaaac
     2641 cgcacaaact gccagccgcc gaacacagtt gccgattcgc ccaaacgttt tgccgacgaa
     2701 acataaaacc cgtcctgcct gccgttattg tattccgccc tatcctgttc gcggtagcgt
     2761 tggcggtaat gttccagcgc gaccgaaaat tgccatcccg ggtttgggcg gtaagtatgg
     2821 gacaactgca cgccgactcc gtgcgccagc atatacggcg gcaggcggcg gttgtttacc
     2881 cgttttgttt tcgcatcaaa gccgtcgctg cccgacaact gcacctgata aaacggcaaa
     2941 atccccgccg tctgccgtgc atttttatac tgccaaccca aatacgctct gccgaacccg
     3001 tcgtcataag ctgatttttt actgaaataa tagctcgtgc cgccgatatt ggaacggaac
     3061 aacaaataat gattatctgc caacgccgtc agtttttccg cctcgatttc ataattcaag
     3121 cctgccgccc gctccgcccg gctgacactg catatctgcc ggcctccgtt ttgccggcaa
     3181 tactgcggcg cggcattatt ggcatttcta ttgaccgccg gactgatgcc gcccgaaaaa
     3241 cgccagcccg tcagcccctc cgtttttttc cgaaaacgcc ccacattttc caaaaccggt
     3301 gccggcaaat ccaattttgc cgcctccgca aaatgccttt ctgccgactt cagtcggaaa
     3361 tcgtcaaact ccgccgccgc caaatccagc aaaatccgct cgtctgccgc attttccccg
     3421 tgcagttccc gataccgcgc caccgcctcc gccggccttc ccgccaattt cgccagcaaa
     3481 gcccgcgccc tgccgtacaa aaccgcgtca taatccggca gcttggcata caaatccgcc
     3541 aacgaagcga ttaaatccgc ctgattgccg ttgagcgcgt cgcgcaaact atgttccaac
     3601 attttcggat gcgccaacaa aaaatccccg tcaaccacgc gcggggcatc attttcaact
     3661 ttccaatccg attccgccca cttatccgac accaaccgtt gcacctgcaa caatgccttg
     3721 tcatccaaaa tcgcgggcgc atccgcccca taggcggcag aaacacctgc cgcacaccaa
     3781 acaaccaaaa agccgtatct gaaatacaac ataccctgtc atttaccttt ctggcaaaca
     3841 cgccgccgaa gcacgtcaaa ccatccgaaa aacaggcaga aacccgtgaa aaccggcttt
     3901 gccgtctgaa agcgggcagg caaaaaaccg ccgcccgatt ttcaaagggc ggatttcaca
     3961 tttatagcgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacaaatagt
     4021 acgaaaccga ttcactcggt gcttcagcac cttagagaat tgttctcttt gagctaaggc
     4081 gaggcaacgc cgtaccggtt tttgttaatc cactataaca gcaaccctgt cgccgtcatt
     4141 cccacgaaag tgggaatcta gaaatgaaaa gcaacaagca tttatcggaa ataactgaaa
     4201 ccgaacagac tagattcccg cctgcgcggg aatgacgaat ccatccgcac ggaaacctgc
     4261 accacgtcat tcctacgaac ctacatcccg tcattcccac aaggacagaa aatcaaaatc
     4321 agaaacctaa aatcccgtca ttcccacgaa agtgggaatc taggtctgtc ggtgcggaaa
     4381 cttatcgggt aaaacagttt ctttagattc cacgttctag attcccgcct gcgcgggaat
     4441 gacggctgca gatgcccaac ggtctttata gtggattaac aaaaatcagg acaaggcgac
     4501 ggagccgcag acagtacaaa tagtacggaa ccgattcact cggtgcttca gcaccttaga
     4561 gaatcgttct ctttgagcta aggcgaggca acgccgtact ggtttttgtt aatccactat
     4621 accgattttt gcaccgaccc acaaaaccag ttgacatcat ataacattta aactgataat
     4681 caaaactatt attaacacat catcaagatt gagtatgcga tgaaatacaa agccctctcc
     4741 ttactgccgc ttgctgccgc ccttgccgcc tgtgccgggg ggggggtagc cgaaccgcac
     4801 gtccccgtgt ccatccccac cgccacgccg ctgaccggtg aggtaaagtt atcaagcgat
     4861 aacagcaaaa tcgaaaacat caacaccgcc aacactgaaa cacatccgcc gcgccgcacc
     4921 agacgctccc tctatgcctc cccgcaaaac acatcctccg gtatttccat tcagcagcgg
     4981 gaagtagaaa aaatctattt cggtgttaaa tcaccagaaa aatcattcat cttccaaaca
     5041 cccggcggcg cgcaatacgc cctttcatcc tacgccgacc ccatcgtccc cagctactcc
     5101 tcccccgatt tcaaaattcc cgaccgccac gcagggcagc ggcttgccga cggcagccgc
     5161 atctttatct gctgcagcga ctccggggct acttcgtatg cggaaattac caaacaagat
     5221 tatatgaaat tcggggcgtg gataggtccc aacggcgaaa tcgacctctt cgccggcggc
     5281 ttccccgtcg gcaaaacgcc acctcctgcg ttctcctacg gcaacagcac gcccgaaacc
     5341 gcattgtcga agggcaaaat cacttatcag gtttggggca tccgcgtcaa agacgggcaa
     5401 tttgttacct cctcttatac gccgcccaaa ggcagctctt ttaccggcta caccaacacc
     5461 cccgtccttt cctttatcac cgccaatttc aacagcaaca aactggcagg cgaaatccgc
     5521 ggcaacagcg attacggacc gagtgtgaaa attgaaaacg caacgatcag cggtccgagc
     5581 ttttccggca atgccacctc cggcggcaaa accggcaact tggaaggcaa gttttttgga
     5641 aaattcaacg gcagctacgg caacactgaa accagcatag gcggcaaaat cacttttaaa
     5701 gacgaccgct ccctcgatac cgtattcggc ggtgtgagtt atgtaaaaaa acttgatgaa
     5761 accgccaatc gagataccga acaccttact aaacaataaa ccatctcatc cctacaaagg
     5821 tttcttatgt ccatcccctt caaacccgta ttggctgccg ccgccatcgc ccaagcgttt
     5881 cccgcctttg cggcagaccc cgcgccgcag tccgcccaaa cgctgaacga aatcaccgtt
     5941 accggcacgc acaaaaccca aaaactcggc gaagaaaaaa tccgccgcaa aaccttagac
     6001 aagctcttgg tcaacgacga acacgacctg gtgcgctacg accccggcat ttccgtcgtc
     6061 gaaggcggca gggcgggttc taacggcttt accatacgcg gcgtggacaa agaccgcgtc
     6121 gccatcaacg ttgacgggct ggcgcaggcg gaaagccgct cttccgaagc cttccaagaa
     6181 ttgttcggcg cgtacggcaa cttcaacgcc aaccgcaaca cttccgagcc ggaaaacttt
     6241 tccgaagtaa ccatcaccaa aggcgcggac tcgctcaaat ccggcagcgg cgcattgggc
     6301 ggcgcagtca attaccaaac caaatccgca agcgattatg tttccgaaga caagccctac
     6361 catttgggga taaagggcgg cagcgtcggc aaaaacagcc aaaagttcag cagcatcacc
     6421 gccgccggca ggctctttgg tttggatgcc ttattggttt atacccgccg cttcggcaaa
     6481 gaaaccaaaa accgctcgac cgagggcgat gtcaaaattg aaaacaaggg atatgttttc
     6541 agcccaaccc aatcattcag caagtaccag acctacgtag ccacaggggt tgcgcgctcc
     6601 caacccgacc cgcaagaatg ggtaaacaaa agcaccttgt tcaagctggg ctacaatttc
     6661 aacgaccgca accgcatcgg ctggattttt gaagactccc gcaccgaccg ttttaccaac
     6721 gagctgtcta atttgtggac gggtacaatt tactctcccg caacgggcga ctaccgccac
     6781 cgccaagacg tgagctaccg ccgccgctcc ggcgtcgaat acaaaaacga attggaacac
     6841 ggcccgtggg acagcctcaa gctgcgctac gacaagcagc gcatcgatat gaacacttgg
     6901 acttgggaca tcccgaaaaa ttacgatttg cgcggcatca acagtgaagt ttaccattcg
     6961 ttccggcata tccgccaaaa caccgcgcaa tggactgccg attttgaaaa acaactcgac
     7021 ttttccaaag ccgtttgggc ggcgcaatac ggcttgggcg gcggcagagg ggacaatgcc
     7081 aactcggatt acagctattt cgtaaaactg tacgacccca aaatcttcac ttccaaccaa
     7141 gccaaaatca cgatgctgat cgaaagccgg tcgaaatata aatttgccta ttggaacaat
     7201 gcgtttcact tgggcggcaa cgaccgcttc cgcctgaatg cgggcatacg ctacgacaaa
     7261 aacagcagca gcgcgaaaga cgatccgaaa tacaccaccg ccatccgggg gcagattccc
     7321 catttgggtt cggaacgcgc gcacgcgggc ttcagctacg gcacggggtt cgactggcgg
     7381 tttaccaagc atctgcactt gttggcaaaa tacagcaccg gcttccgcgc accgacttcg
     7441 gacgaaacct ggctattgtt cccgcatcct gacttttacc ttaaagcaaa ccccaacctg
     7501 aaggcagaaa ccgccaaaaa cttcgagctg ggacttgccg gcagcggcaa agcaggaaac
     7561 tttaaattct ccggtttcca aacccgctac cgtaatttta tcgaactgac ctacatgggc
     7621 gtatcctcag acaagcctaa cagccctaat tatgcgccga tttccgacgg tactgcattg
     7681 gtcagctcgc ccgtttggca aaaccaaaac cgctcctcgg catgggtgaa aggtttggaa
     7741 tttaacggca catggaacct cgacagcatc ggtttgccgc aaggcacgca cgcaggtgtc
     7801 aatgtcagct acatcaaagg caaggccaaa caaaccaacg gacaggaaac ccctattaac
     7861 gccctttcgc catggagtgc ggtttacaat ctgggctacg acgctccttc caaacgttgg
     7921 ggcatcaacg cctacgccac gcgcaccgcc gccaaaaagc cgtccgacac cgtccacagc
     7981 aacgacgact tgaacaaccc gtggccttat gccaaacaca gcaaggccta tacgctgttc
     8041 gacctttccg cctacctcaa catcggcaaa caggttacgc tccgcgccgc cgcgtacaac
     8101 attaccaaca agcagtacta cacttgggaa tctttacgca gcatccgcga gttcggcacg
     8161 gtcaaccgcg ttgacaacaa aacccacgcc ggcatccaac gctttacctc gccgggcagg
     8221 agctacaatt tcaccatcga agcgaagttc taagctcctg atgtgccaat gccgtctgaa
     8281 acccgatgat ttgggtttca gacggcattt tttacggtcg caccgccgcc ccctttcagg
     8341 cttgtaccaa gcccaatccc gcaactctcc gtcattcccg caactctccg tcattcccgc
     8401 gactctccgt cattcccacg gaagtgggaa tctagaaacg caaagctgca agaatttatc
     8461 ggaaatgact gaaactcaac gaacctggat tcccgcctgc gcgggaatga cgaagctatc
     8521 cgcacagaaa cctgcaccac gtcattccca cgaaagtggg aatccagaac gtaaaatctg
     8581 aagaaaccgt tttatccgat acgtttccgc accgacagac ctagattccc gctttcgcgg
     8641 gaatgacggc ggaaaggttg ctgtttttcc gataaattcc tgccgctctt cgtttttggg
     8701 atggcgggaa ataaaacaaa agcgcgcgta tcaaaaaaca aaaatgcaaa gaacggcgtt
     8761 ggcaatttta aggtttgcgc cttagccgca cttattcgca aaaaaaaccg cacggcgttg
     8821 accgtgcggc ttgttgtctg aaagcttcag acggcatttc ttacatcatg ccgcccatac
     8881 cgcccatgcc gcccatgtca ggcatagcag gtttttcttc agggatttca gcgatcatgc
     8941 agtctgtggt cagcatcaga ccggcgatag atgcggcgtg ttgcagcgcg gaacgggtta
     9001 ctttggcagg atcgagtacg cccatttcaa tcatatcgcc gtattcgccg ctgccagcgt
     9061 tgtaaccgta gttgcctttg ccttccaaca ctttgttcac gactacgctg ggttcgccgc
     9121 ctgcgttggc aacgatttgg cgcagcggag actcaatggc gcgcaagacg atttgtacgc
     9181 ctgcgtcttg atcggcattg ccggtgtgca ggttttccag agcggcacgg gcgcgcaaca
     9241 gggctacgcc gccgcctgca accacgcctt cttcaacggc tgcgcgggta gcatgcagcg
     9301 cgtcttctac gcggtctttt ttctctttca tttcgacttc ggtagcggca ccgactttga
     9361 ttactgccac gccgcctgcc agtttggcca cgcgctcttg cagtttttct ttgtcgtaat
     9421 cgctggttgc ggtttcgatt tgttggcgga tttcggcaac acgcgcttcg atttgggctg
     9481 cgtcgccgaa gccgtcgatg atggtggtgt tttctttacc gatttcgatg cgtttggctt
     9541 gacccaagtc gtccaaagtc gctttttcca gagacaggcc gacttcttcg gaaatcaccg
     9601 tgccgccggt caggatggcg atgtcttgca gcatcgcttt gcggcggtcg ccaaagcccg
     9661 gagctttaac ggcaacggtt ttcaggatgc cgcgaatgtt gtttaccacc aaagtcgcca
     9721 aggcttcgcc ttctacgtct tcagcgataa tcaagagcgg acggctggct tttgccactt
     9781 gttccaaaac aggcaacaag tcgcggatgt tgctgatttt tttgtcgaac agcaatacaa
     9841 acggattgtc caagccggcg atttgttttt ccgcatcgtt gatgaagtaa ggagacaggt
     9901 agccgcggtc gaattgcata ccttcaacca cgtccagctc gttttccaaa gatttgccgt
     9961 cttcaacggt aatcacgcct tctttgccga ctttttccat cgcttcggca ataatcgcgc
    10021 cgacttgttc gtcggagttg gcggaaatcg agccgacttg ggcgatttct ttagaagtgt
    10081 cgcaaggttt ggcgatgttt ttcagctctt caaccaaagc ggcgacggct ttgtcgatac
    10141 cgcgtttcag gtcggtcggg ttcataccgg cggtaacgta tttcatacct tcggcaacga
    10201 tggattgcgc cagtacggtg gcggtagtcg taccgtcgcc cgccacgtcg ttggttttgg
    10261 acgcgacttc ttttaccatt tgcgcgccca tattttcaaa cttgtctttc agttcgattt
    10321 ctttagcgac ggttacgccg tctttggtaa tgtgcgggcc gccgaaagcg cggtcaacca
    10381 ccacgttgcg gcctttggga cccagggtta cgcgcacggc gtttgccaga atgttcacgc
    10441 cgtttaccat tttttgacgg acttcattgc cgaattgtac gtcttttgct gccatttcaa
    10501 ttctccaaaa atcattaaaa ctgtctgata aaaccgttta tgccgtctga agacggtttg
    10561 ccgtttcaga cggcatcatc attcgcactt attcaacgat gccgaaaata tcttcttcgc
    10621 gcattaccaa cagctcttcg ccgtcggctt ttacggtttg gccgctgtat ttgccgaaaa
    10681 tgattttgtc gccgactttg acatccagcg gacggcgcgc gccgtcttta ccgattttgc
    10741 ccgcgcccac ggcgatgact tcgcccatat cgggtttttc ggcggccgca cccggcaaaa
    10801 cgatgcccga tgcggttttc tcttcagctt ccaagcgttt gacgacgacg cggtcgtgta
    10861 aaggacggat ggtcatatct atgctccgat aaaatggttt gaaaacaatc atctgcccga
    10921 acggttcgga cagattaagg atgaaaaccg gacagccgtc aggcggctgc ccgtataagt
    10981 cggcaaaatt agggtgtgtg cgggcaaatt caagtgaggc ggaaaaaatt tatttccgcc
    11041 gttttttata gtggactaaa tttaaggggc tgtactagat tagcagatat gttaccctcg
    11101 aaatatgaag ataacgcact gcaaattaaa gaaaaaagta cagaaagagc tgctccgttt
    11161 ttttgtact
//
LOCUS       DBBZYD010000069        11075 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.069, whole genome shotgun sequence.
ACCESSION   DBBZYD010000069 DBBZYD010000000
VERSION     DBBZYD010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11075
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.069"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..138)
                     /locus_tag="ACJJDL_001499"
     CDS             complement(<1..138)
                     /locus_tag="ACJJDL_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7574185.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YL"
     gene            325..507
                     /locus_tag="ACJJDL_001500"
     CDS             325..507
                     /locus_tag="ACJJDL_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574186.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(569..1570)
                     /locus_tag="ACJJDL_001501"
     CDS             complement(569..1570)
                     /locus_tag="ACJJDL_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HGG7574187.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1647..5480)
                     /locus_tag="ACJJDL_001502"
     CDS             complement(1647..5480)
                     /locus_tag="ACJJDL_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HGG7574188.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALIREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAIPLDANSAVIN
                     TEKLDKHRGVEYVELAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWEWLLANLDAPLADYKVRYGSA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSIKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5741..5837
                     /gene="ffs"
                     /locus_tag="ACJJDL_001503"
     ncRNA           5741..5837
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACJJDL_001503"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            6005..7696
                     /gene="dld"
                     /locus_tag="ACJJDL_001504"
     CDS             6005..7696
                     /gene="dld"
                     /locus_tag="ACJJDL_001504"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HGG7574189.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            7828..7935
                     /locus_tag="ACJJDL_001505"
                     /pseudo
     CDS             7828..7935
                     /locus_tag="ACJJDL_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7991..8362
                     /locus_tag="ACJJDL_001506"
     CDS             7991..8362
                     /locus_tag="ACJJDL_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HGG7574190.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8517..9065
                     /locus_tag="ACJJDL_001507"
     CDS             8517..9065
                     /locus_tag="ACJJDL_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HGG7574191.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            9199..10290
                     /locus_tag="ACJJDL_001508"
     CDS             9199..10290
                     /locus_tag="ACJJDL_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HGG7574192.1"
                     /translation="MNAQTLIANVAEFVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRAVKDK
                     YLADILQGKVLAGTGMSNTVKHLADIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANIVNAEVNSYLDDGYDSLKARLD
                     GAWAETERLAGLAWSGTPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
     gene            10839..11009
                     /locus_tag="ACJJDL_001509"
     CDS             10839..11009
                     /locus_tag="ACJJDL_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HGG7574193.1"
                     /translation="MAQYMCGPCGWIYDEELGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2589 a         3034 c         2993 g         2459 t
ORIGIN      
        1 aaggtaacgg gttctttgac gattcaggta ctgttcgatc ggctgccaat caatcacctg
       61 gtccaacttc aatagcggga aacggtcgat gtgtttggca atcatggctt gggcggtttg
      121 ttggaagaag gtgctcatgg aaaatcccct aaatgtcttg gtgggaattt aggggatttt
      181 ggggaatttt gcaaaggtct ctatttgtac tgtcttcggc tcgccgcctt gtccttattt
      241 aaatttaatt cactatattt gcccgtgcat ttgtgataaa ttcggcactg tatttgatat
      301 gattttaaca aatcgggagg ggcaatgttt tggtatgtaa tcggcttttg ctcctttgtc
      361 gtcgcgctgc tgtcgctgtg ggtcaatgtc ggcgcattcg gtatgcagga agacgatacc
      421 ccgcaatcgg attatgaaaa acgtttgggc ttgggtgcga agctgaaaaa caaaaatacg
      481 ccggatacgg aagaaaagca gcaataaaga tatgaaatgc cgtctgaaag attttcagac
      541 ggcatttgct ttgaagcatg ggagacagtc aaacatttat ctcatgctca aatgcgttca
      601 ggattcggcg gacttcatcc gcatccttaa ccgttcggac gcggtcaaac agcgtttgcg
      661 ccgggtcgaa cgtttttttc atcatgccca accattgctt aagacgggcg atcgggtatt
      721 tattgtttgc ctcttttgtc aggcacagct cgaaaaactg ccgtatccat ttggaaactt
      781 cggcaaaatc cgtgtctttg accggcccgc cgttctcgta ttgcttgatt tgccgcgcca
      841 aatcggggcg gatgaccgcg ccgcgaccga gcatcacgct gttgcagccg ctgattgttt
      901 tgatgccgat atagtcttgc aggctgaaaa cgtcgccgtt ggcggtaacg ggaatattga
      961 cgctgtctcg gattttcctt atccattccc aatgcgccgg cggttcgtaa ccctcggctt
     1021 tggtacgcgc gtgtacggtc agtccgcatg cgcccccttc ggcaatcgca caggcgcatt
     1081 ccaaagcccg gcttttgtct tcgtaaccga gccgcatttt tgcggtgagc ggaatatgtg
     1141 cgggcaaacg tccgcgcagc gttttgacga tgtggaatat cagttccggc tcttttaaaa
     1201 ggattgcgcc gcctttgtgt ttgttgacgg tgggcgcggg gcagccgaag ttcaaatcga
     1261 ttttgttcgc accgaagcgg acggcttcca gcgcattcgc cgccatattg tccgcatcgc
     1321 tgcccaaaag ttggacggtg cagggcgtgc cggaaaacgt tttgtttccg ttggcgattt
     1381 cggggacata ttttaaccat atggatcggg aatgcacggt atgggtaatg cgtacaaatt
     1441 cgctgacgca ttcgtcgtag ccgccaatac gcgtcagcag gtcgcgcatc acgtcatcga
     1501 ccagaccctg cataggggca aggatgattc gggttttttg tttgggttcg gttgtttgtc
     1561 cgtcaatcat gatttgggta ggtattgggt ttaaacaatg ccgtctgaag gctttcggcg
     1621 ttcagacgac atttccgtgt ccgttgttac agcaatactt tttccacgcc gccgttgttg
     1681 gcttttttca caaactcgtc tagccagttt tcgccgagaa tgtgtttcgc catttcgatg
     1741 acgatgtagt cggcaggcat attgttgtcg tcggcgtagc ggctcaaacc ttgcaggcag
     1801 gcggggcagg aagtcagcat tttgacgggt tcgccctgcg gcagctcttt gaggtttttc
     1861 tcgatttcct cttgtttgcg gaacttgacc tgagtggcga tgtctggccg tttgacggca
     1921 aacataccgg attcgccgca gcagcggtcg cttaaaacga ctttctgtcc catcaggctg
     1981 ctggccattt gggtggcgtt catggtttta atcggggtgt ggcaggggtc gtggtagagg
     2041 tattgctgac ctttcacgcc gtcgagtttc acgccttttt cgagcaggta ttcgtggatg
     2101 tcgatgatgc ggcagccagg gaagatttcc tcgaagcggt atttttcgag ctggtcgtaa
     2161 caagtgccgc aactgacaac gacggttttg atgtcgaggt agttgagggt gttcgccata
     2221 cggtggaaag ccacgcggtt gttggtgctc atttcttcgg ctttagcctt gttgccgccc
     2281 gcgtcttgcg gatagccgca acacatatag ccgggcggca ggacggtttg tacgccgacg
     2341 tgccagagca tggcttgaac ggcaagtccg atttggctga acaggcgttc cgaaccgcaa
     2401 cccgggaagt agaacacggc ttcggcatct tcgggcgcgg cggggttgcg gatgatgggg
     2461 atgcttttgc cgtcttcgat gcccaataag gagcgcggtg ttttagcggg tacgcttttg
     2521 ggcagtgggc ggttgatgaa atggataacc tgttctttaa tcggggcttt gccgacggtt
     2581 gccttgggtt cggctttttg ctttttcgtg ccgatcggaa gaagcttgcc gattttgtag
     2641 gcaaagtttt gcgcggggaa gccggtttgt atcatggcgg cgcgaagggc tttgatggtt
     2701 ttcgggccgg tggcgttcaa aaacgccata cccatagctg cggcaggcgc aaatcgtttg
     2761 tggccggaat cggcaaggta gttgcggacg gctacggtta cgtcgccgaa gtcgatgttg
     2821 acggggcagg gtttgacgca gcggtggcac acggtgcagt ggtcgccgat gtccatgagt
     2881 tcttcaaagt gtttgatgga aacgccgcga cgggtttgtt cttcgtataa gaaggcctcg
     2941 gtcagcaaac ccacgccgag gattttgttg cgggggctgt acagcaggtt ggcacgcgga
     3001 acgtgggtgg agcagacggg tttgcatttg ccgcagcgca ggcagtcttt gacggaatcg
     3061 gcaatcgtgc cgaggtctga tttttccata atcagcgatt ccgcgcccaa aagctcgaaa
     3121 gacggcgtgt aggcgttgcg taagtccgag cctttcatca gtttgtgacg gttgaaggtg
     3181 tgtttgggat cgacttggtt tttgtagtcc caaaacggct gcatttcttc gtcgcttaaa
     3241 aattcgagct tggtgatgcc gatgccgtgt tcgcccgaaa tcacgcctcc gagcgaacgg
     3301 gcgattttca taatgcgttc gactgagcgg tatgccgtct gaagcatttc ggcatcgtct
     3361 gagttaaccg gaatattggt gtgaacgtta ccgtcgccgg cgtgcatatg cagggcgaca
     3421 aagacgcggc tgcgtacggt ttttgcgtgg atttttccca agccttggat aattttggtg
     3481 tcggttttgc cgctgaagat ttcagaaagc ggcttcatta cgtccgcttt gacagacacg
     3541 cgcaggcgga aatcgcggaa tgcggtaaag cagctttcat tgtctttggc ttcgggcgcg
     3601 gcgtggacgg ctgagccata gcgtacttta tagtcggcaa gcggcgcgtc taagttagca
     3661 agcagccatt cccaacgcgc tttgacggcg gaaacgtggg caagggcgtg tttgccgcgt
     3721 tcgcccaaaa gttcggcggt cggcaggtcg gttcccattt tgtcgatggg gagtttgccg
     3781 gacagatatt gttccaaggc ggcacagagt ttgagtttgt tttggatgga aagctcaatg
     3841 ttaatgcgtt cgatgccgtc tgaatactca ccgagccttt cgagtgggat gaccacgtct
     3901 tcgttaattt taaaggcgtt ggtgtgtttg gcgatggcgg cggtgcggct gcggtcgagc
     3961 cagaaggttt tgcgcgcttc gggcgatacg gcgataaagc cttcgccgtc gcgggcgcgg
     4021 gcaagttcac agatgtgctc ggcggctgcc tctacggcgg cttcgtcgtc tgaaaccacg
     4081 tccgccagta agaccatttt cggccggcct ttgcctgccg ctttggtggc gtagccgacg
     4141 gcgcggacat aacgccagtc caaatgttcc aaacctgcca gccgaacgct gtcgtgggcg
     4201 agcaggaaat cgcggatttc gacgatagaa ggcgtagcgg tggcgaccgt gccgaaaaac
     4261 tccatacaca cagtgcgcgt gtatttcggc attttgtgca acacgaaagc aacgccggtg
     4321 atgatgccgt ccgtgccttc tttctgtacg ccgggcaggc cgctcaagaa tttgtcggta
     4381 acgtctttgc ccaaaccgac tttgcgaaat ttgtggccgg gaatttccaa acgttcggtt
     4441 ttaacgatat tgaggccgtc tgaatccagc gtgtgaacgt cgaacacggc ggtttcttcg
     4501 tcgtggattt tgccgaaatt gtggcgcacg cgctcgatgc gcagccattc gccctgcggg
     4561 ttgaccatct gccagtaggc gaggttgtcc aacgccgtcc cccacagcac ggctttttta
     4621 ccgcccgcgt tcatcgccac attaccgccc acacaggacg catcggcgga agtcggatcg
     4681 acggcgaaca ccaaacctgc ctgatgcgcg gtttcttcca cccgccgcgt aaccacgccc
     4741 gcgccgcacc ggataatcgg atgcttgccg tccaagcctg ccagctcaac gtattcaaca
     4801 ccacgatgct tgtcgagttt ttcggtattg atgactgcgc tgtttgcgtc caaaggaatc
     4861 gcgccgccgg tataacccgt gccgccgccg cgcggaataa tgaccaaatc cagctcgatt
     4921 aaggcgcgca ccaaaggcgc gatttccgcc tccgtgtcgg gattgacgac gacaaacgga
     4981 tactccacgc gccagtcggt tgcatcggta acgtgcgtta cccgcgccaa tccgtcaaac
     5041 ataatattgt gcggcttggt gattttgctc aaacgctcca aaatctgccg ccgcttttgg
     5101 ctggtttcat caaaactgct atcaaaacgc tcgactgctt tttctgctgc ggcaaccaag
     5161 acatccactt gccgattatc gtcgcggcgt ttgcggattt cgttcaggcg gtggcgcatt
     5221 tcgcgtatca acgcggcgcg gcgtttcgga tgctccagca aatcatcgac cagatacgga
     5281 ttgcgcacga ccacccaaat atcgcccaac acttcaaaca gcatccgcgc cgaacgtcca
     5341 gttttacgct gtccgcgcaa gtcttgcaga atctgccacg cctcgtcgcc caataatcgg
     5401 atgacgattt cgcggtcggt gtaggaagta tagttgtagg ggatttcccg aatacgctga
     5461 ggggcggtag tcgtggtcat ggtgtgtccg tgtttggcag tttttatttg aatgccgtct
     5521 gaaaagtcgg tttcaggcga gtttgaaaag gcgataatgt agttcaattt ttgatacttt
     5581 tcaatgccga aacaggaaat acccttatag aaacaaaata acgctttgag aaattgttga
     5641 caatattatc aaatataaat tttaggtggt gtttccggcg tatgaccgta tcaaaacggt
     5701 tgagtttttc agaaaacccg ttataatgcc gtttctctga ggcgggtctc cccgcatggc
     5761 aaatcggaac accgggtcag gggcggaagc cagcagccca ctccgatgcg ccagtgccgg
     5821 gggtttggcc cgccgcccta tttgaaacgc cggagcttcg atgttccggc gttcccgtat
     5881 cgcaccgatg ccgtctgaaa gccgttcaga cggcatttcc tttactttgc cataacgcat
     5941 aactacaatg ggaaaacaat ttcaatgtgc atatgcacct gccgacaatt ttaaggaaac
     6001 tgccatgagc gcatcacaat tactgtcaag actgacccaa accgtaggcg aaaaatacat
     6061 catcaccgac cccgcgaaaa ccgaacaata ccgccaaggc taccgcttcg gcgagggtaa
     6121 ggcgttggcg gtggttcgcc ccggaagcat tctggaaatg tggaaaattc tgcaggcctg
     6181 cgtcgaagcg gacgtgattg tgattacgca ggcggcgaat accggtttga cgggcggctc
     6241 gacccccgac ggcaacgatt acgaccgcga catcgtgatt gtgaacacca tgcggatgaa
     6301 catcatccaa accatcaaca acaacgaaca agtcgtctgc ctgcccggtt cgaccctgaa
     6361 ccagcttgaa ttgctgctga aacctttggg gcgcgaaccg cattcggtca tcggctcatc
     6421 ctgtatcggt gcgtccgtct tgggcggcgt gtgcaacaac tccggcggcg cgttggtaca
     6481 gcgcggcccg gcctacaccg aaatggcgtt gttcgcccaa atcaacgaag aaggcaggtt
     6541 ggaactggtc aaccacttgg gcatagactt gggcgacacg cccgaagaaa tcctgaccaa
     6601 cctgcaaggt catcattatc aaaacaaaga catcaaacaa gacgcgggca aagggcacga
     6661 ccacgcctat tgcgaacacg tccgccaagt ggacgaaccg accgccgcgc gtttcaatgc
     6721 cgaccccgcc cgccattacg aagcctcggg ctgcgcgggc aaactgatgg tttttgccgt
     6781 ccgtttggac accttcccgc aagaaaaaca aaccgccgtg ttctacatcg gcacgaacga
     6841 catcaacgag ctgaccgaca tccgccgcgc cgccttgggc gaatttgaaa gcctgcctgt
     6901 ttccggcgaa tacatccacc gccacgcttt cgacattgcc gacgtgtacg gcaaagacac
     6961 gttttacgtc atcaaaaaat tcggtacgca ccaactgccg aaattatttg acttgaaggc
     7021 gcgcgtggac aggttcggca aaaaagccag cttcctgccc aaacattttt ccgacaaggc
     7081 catgcagttc gtcagcaaat acctgcccga ccacctgccc aaatccatgc gcgattaccg
     7141 cgacaaatac gaacaccacc tgattctgaa aatgggcggg aaaggcgtgg atgaggcgcg
     7201 cgcgttctta aaagaatatt ttgcacacca cagcggcgcg tttttcgagt gcaacgccga
     7261 agaaacccaa gccgcgatgc tgcaccgttt cgccgtcgcc tccgccgcca tccgctaccg
     7321 cgccgtgcat gatgacgaag tggaagactt ggtcgcgctt gacatcgccc tgcgccgcga
     7381 cgaccgcgac tggtttgaaa aactgccgcc cgaaatcgac aataaaatca tccacaaact
     7441 ctactacgga catttcatgt gccacgtttt ccatcaggat tacatcatca aaaaaggcaa
     7501 cgactgcatg gcgttggaac acgaaatgct gcatctctta gaccaacgcg gcgcgcaata
     7561 tcccgccgaa cacaacgtcg gtcatttgta tgaagccaag cccgcgctca aacagtttta
     7621 ccgcaaactc gacccgacca acagcttcaa cccgggtatc ggcaaaacca gcaaaaagaa
     7681 aaactgggcg gaataagcgc gtccgctttg aaggcaggca atgccgtctg aaggcaaaac
     7741 gccgttcaga cggcattgtc gggtttgaag ttccccgtcg ggtaatcgct ttcaaaccgt
     7801 atgccgacac acgggcgcgc ccctcccaaa tatagtggat taaatttaaa tcaggacaag
     7861 gcaacgaagc cgcagacagt acagatagta cggcaaggcg aggtaacgcc gtactggttt
     7921 aaatttaatc cactataaag tctgatccta ccttcccaaa gggcagggtt tcaaccgaaa
     7981 aggaaacacg atgaaaccat acaaaatcta cacccatccc gccctgccgc cccaagccgt
     8041 caaacaaggc tggtcatggc cggggctctt gttcggcacg ctgtgggcgt gtttcaaaag
     8101 aatgtggggt ttggggctgg ggctgacggg cgcgatattc gtgctggctg tgtttgccca
     8161 actggtttac ggcgacacgc ccgccacaga ctcggcgttt aacgtattgg gcttggcggt
     8221 ttccgtctgg ttcggcgcaa agggcaacag cctttatgca cgccaccttt tatcgcgcgg
     8281 ctataccgaa ttgcccgaaa cggttgaggc agccaatccc caagccgcat tggcgcaata
     8341 tttcgggcgc gggggccgat aagcgcgttt tcttttccat catgccgtct gaaaaatgtt
     8401 cagacggcat ttcttataac cttttgtttg cagcacataa ccaatcagtc tttcctattc
     8461 cgttccgaaa tgcataccat gcgcccgtac ccaatatttg cgaacaagga aagaaaatgg
     8521 cacgtttaac cgtacacacc ctcgaaaccg cccccgaagc cgccaaagcg cgcgtcgagg
     8581 cggtacttca aaacaacggc tttatcccca accttatcgg cgtattatca aacgcccccg
     8641 aagccttggc gttttaccaa gaagtcggca agctcaacgc cgccaacagc ctgaccgccg
     8701 gcgaagtcga agtcatccag atcatcgccg cccgtaccaa ccaatgcggt ttttgcgtgg
     8761 cagggcacac caaactcgca accctgaaaa aactcctgtc cgaacaatcc gtcaaagccg
     8821 cgcgcgcttt ggcagcaggc gaatttgacg atgccaaact cggcgcgctc gccgccttta
     8881 cccaagccgt aatggcgaaa aaaggcgcgg tatccgacga ggaactcaaa gcatttttcg
     8941 atgcgggcta caaccagcag caggcagtcg aagtcgtgat gggcgtagcc ttggcaaccc
     9001 tgtgcaacta cgtcaacaac ctcggacaaa ccgaaatcaa ccccgaattg caggcttacg
     9061 cctgatacgg caaaccgccc gaatatcggg cggtttttca aaaacacccc ctcaaacaaa
     9121 aacaagccgc caagcggcag ggaagcagcc gcgcatcagg cgcgcccccg attcccccgc
     9181 aaaccttaag gaacaaagat gaacgcccaa accctgattg ccaacgttgc cgaattcgtc
     9241 aaaaccaagc tcaaacccat agtggacgac atcgaccgca aaggatacta ccccgaagca
     9301 tttatgcgcg aactcggcgc aatcggtgga ttcggcgcag tcggtacaga agccgaaggc
     9361 ggcaacggct tgggtttggc aacgcaaatc gccgtattgc gcgaaatcgg caaagaatgc
     9421 ggcgcaacct ctttcagtgc gtggtgtcag gcggcttgcg cgtggtatct gcaccaaacg
     9481 cccaaccggg ccgtcaaaga caaatacctt gccgacatcc tgcaaggcaa agtattggcg
     9541 ggtacgggca tgtccaatac cgtcaaacac cttgccgaca tcgaaaaaca caacctccaa
     9601 gccgagcgcg tggagggcgg ctacacagtc aacggcgcgc tgccgtgggt gtccaacatc
     9661 ggcgaagacc acatttgggc gaataccgcc caaatcggcg gcggctacgt catgtttatc
     9721 accggcggac aatgggaagg cgtaagcctg caaaactgcc ccgaattttg cgccctcgaa
     9781 ggcacgcgca ccttcagcct gaacttcaaa gacgtattta tccccgacga agacatcatc
     9841 gccgcgcccg aacagtttgc cgactacatc caaagcatca aagcaggctt tatcctcctg
     9901 caaatcggca tcggcgcggg cgtgatagac ggcagcctcg gcatcatccg cctcgccaac
     9961 atcgtcaatg cagaagtcaa cagctatctc gacgacggct acgacagcct caaagcaagg
    10021 ttggacggcg cgtgggcaga aaccgaacgg ctcgccggct tggcttggag cggcacgccc
    10081 gacaaccttg ctaccctcaa gctgcgcgaa gccgccgccg tactggcact tgccgccgcc
    10141 caatccgccg ccctgcattc cggcgcaaaa ggctacctga tgcgcagtcc cgcccaaagg
    10201 cgcgtccgcg aagcgatgtt tgtcgccatc gtaacccccg caatcaaaca cctacgcaaa
    10261 gaaatagcgg caatcgaagc cgcaaaataa acaggcggaa aaaaccgaaa cccccaccgc
    10321 gtcattcccg cgaaagcggg aatccagccc ccaacgcaac aggaatccat cggaaaaaac
    10381 agaaaccctc aaaccgtcat tcccgcaaaa gcgggaatcc agcccccaac gtaacaggaa
    10441 tccatcggaa aaaacagaaa ccctcaaacc gtcattcccg caaaagcggg aatccagccc
    10501 ccccctaacg caacaggaat tcatcgaaaa aaccgaaacc tccaaaccgt cattcccacg
    10561 gaagtgggaa tccagtaatc gaaaaaccac aggaatctat cgaaaaaaaa cccaacccca
    10621 aaaaaaccgg gcggataccg caccattctc ccaaaccctg atttatagcg gatgaacaaa
    10681 aatcagggca aggcggcgaa accgcagaca gtacaaatag tacgaaaccg attcacttgg
    10741 tgcttgagca ccttagagaa tcgttctctt tgagctaagg cgaggcaacg ccgtactggt
    10801 ttttgttcat ccgctataca aaaaacaagg aaacacaaat ggcgcaatat atgtgcggcc
    10861 cctgcggctg gatttacgat gaagaactcg gcgacccaga acacggcatc ccccctggga
    10921 caaagtttga agacattccc gacgactgga aatgccccga atgcggcgtg ggcaaagaag
    10981 atttctacct gttggatttc gtgatatagc ggcagccgca cccttaggga aagccccgtc
    11041 atccggcgtt ccgcctgcgg cggcagggaa cgccg
//
LOCUS       DBBZYD010000070        10623 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.070, whole genome shotgun sequence.
ACCESSION   DBBZYD010000070 DBBZYD010000000
VERSION     DBBZYD010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10623
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.070"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(120..1337)
                     /locus_tag="ACJJDL_001510"
     CDS             complement(120..1337)
                     /locus_tag="ACJJDL_001510"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HGG7574194.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLDAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAVS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1539..2267)
                     /gene="rph"
                     /locus_tag="ACJJDL_001511"
     CDS             complement(1539..2267)
                     /gene="rph"
                     /locus_tag="ACJJDL_001511"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HGG7574195.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2349..2813)
                     /locus_tag="ACJJDL_001512"
     CDS             complement(2349..2813)
                     /locus_tag="ACJJDL_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HGG7574196.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3030..3806
                     /locus_tag="ACJJDL_001513"
     CDS             3030..3806
                     /locus_tag="ACJJDL_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG7574197.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            3944..4471
                     /locus_tag="ACJJDL_001514"
     CDS             3944..4471
                     /locus_tag="ACJJDL_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574198.1"
                     /translation="MEFVNNLVIFSFLLLMLIPIFFVVYGIYHKIRYRKIYILRISFT
                     LLVVILCSMYYIYCRYLDQQKVAYYCIDEQCISIVHLYKDYGINSPTYARIYAGKILF
                     RFQVRAKNYAELLMEDDISISKKILGNKFIIYGSLPVIYGNVDNIEVKEATGYIDRAS
                     TDYIVSRNLKFRHLY"
     gene            4642..5496
                     /locus_tag="ACJJDL_001515"
     CDS             4642..5496
                     /locus_tag="ACJJDL_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HGG7574199.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5537..6745
                     /gene="pncB"
                     /locus_tag="ACJJDL_001516"
     CDS             5537..6745
                     /gene="pncB"
                     /locus_tag="ACJJDL_001516"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HGG7574200.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEVELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEVGTD
                     DKGRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6837..8555
                     /gene="argS"
                     /locus_tag="ACJJDL_001517"
     CDS             6837..8555
                     /gene="argS"
                     /locus_tag="ACJJDL_001517"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HGG7574201.1"
                     /translation="MNLHQTVEREAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVSEFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKTGEWDADAPTVLTEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            9106..10524
                     /locus_tag="ACJJDL_001518"
     CDS             9106..10524
                     /locus_tag="ACJJDL_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HGG7574202.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIVGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVVAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGKM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHSKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2532 a         3016 c         2613 g         2462 t
ORIGIN      
        1 tttaatccac tatatttttt gttccaaagt caaaatatgc cgtccgaaca ttcgggcggc
       61 agacaaaacg gcactgcccg ataaaggcag tgccgttgtc cgtttcaaac cgtgaaacat
      121 cagcccaaat taaaggcttt atgcaatacc ctggttgcca gttccatgta tttttcatca
      181 atcaatacgg aaactttgat ttcggaggtg gaaatcattt ggatgttgat accctcttcg
      241 gcgagcgtgc ggaagatttt ggcggctaca ccgacgtgcg aacgcatacc caaaccgact
      301 gcagagactt tgcatacggt gtcgtcgcca tcaatagaaa ccgcgccgat actgtcttgg
      361 cgttccgaca ggatttccaa agtctgcttg taatcgccgc gcggtacggt aaaggaaaaa
      421 tcggttgtgc cttcgctgcc gacattttgg ataatcatat cgacttcgat gttggcatcg
      481 gcaaccgcgc ctaaaatctg ataggcgaca ccgggtttgt cgggtacgcc gcgcacgttg
      541 atgcgggctt ggtttttatc gaatgcgata ccggttacgg cagctctttc catgttgtcg
      601 tcctcttcaa aggtaattaa ggtgccattg ccgccgtctt gcaggctgct cagtacgcgc
      661 aggcgcactt tgtattttcc ggcgaattct actgaacgga tttgcaaaac tttcgaaccg
      721 aggcttgcca gttcgatcat ttcttcaaat gtaaccgtat ccatgcggcg cgcttcgggt
      781 acgacgcggg ggtcggttgt gtaaacgccg tctacgtcgg tatagatttg gcactcgtcg
      841 gctttgaggg ctgcggcaag cgcaacggcg gaagtgtcgg aaccgccgcg tccgagcgtg
      901 gaaatatcgc cttcactgct gatgccttgg aagccggcaa cgatgacgac tttgcctgca
      961 tcgaggtcgg cacgcatttt ttcgtcatca atgctttcga tgcgggcttt ggtgtgggcg
     1021 gtatcggttt tgagggcgac ctgccagcct gtgtagcttt tggcatccac gccgatgtct
     1081 ttcaatgcca tcgccaaaag gccgatggtt acttgttcgc cggtggacaa aaccacgtcc
     1141 aattcgcgcg gatcgggatg ctcctgcatt tcgtgcgcca acgcgaccag gcggttggtt
     1201 tcaccgctca tggcggatac gacgacgacg atgtcgtgtc cttcggcgcg ggctttggcg
     1261 acacgtttgg ccacgttttt aatgcgttcg ggcgagccta cggatgtgcc gccgtatttg
     1321 tgtacgatta acgccatgtt tcgtgctttc ttgtgtggga ttggtcgggc agcatggttt
     1381 gctggaaaag cggctattat tactattttt tacatgaagt tcaagaacgg actgcgcttt
     1441 cccgcctgcc gtttgacagc ggtcagcgaa aaacctgttc tttcagattg ttgacaaaat
     1501 gccgtctgaa cggttttcag acggcatccg gacgacaatc aggcggcgga caacgcattt
     1561 tgctggtgtt gcagcagttc gcctatgcct ttttgcgcca gtgcaaccag tttgcccaat
     1621 tcgtccaaac tgaacggcgc gtcttccgcc gtcccctgta tttcgatgat ttttcccgat
     1681 gcggtcatga cgatattcac atcactgtcg caaccggagt cttcgggata atccaaatcc
     1741 aaaagcggca cgccgttcac tacgcctact gacacagcgg caacggcttc gcggatgggg
     1801 ttttcactca aaatgccgtc tgaaaccagt ttgccgacgg cgatttgcag cgcgacaaac
     1861 gcaccggtaa tcgaagccgt gcgcgtaccg ccatctgcct gaatcacatc gcagtcaatc
     1921 aagatttgtc gttcgccgag tttttccata tccacgaccg cgcgcagcga acgcccgata
     1981 aggcgttgga tttcttgtgt gcgcccggac tgtttgcccg ccgaagcttc gcggcgcatc
     2041 cgggaagcag ttgaggcagg cagcatcccg tattccgccg ttacccagcc ttggttttta
     2101 ccgcgcagaa acggcgggac gttttcatct atggaagcgg tacaaatcac tttggtattg
     2161 ccgcattcaa taaggcacga accgtccgta tgcggcagga aatgaggggt gattttgata
     2221 tcgcgcaggc tgtccgcggc gcgcgagatg cggatgtaat caggcatact gccctcccgt
     2281 taaaaacaga taaattaaaa agccttaaat atgaaaaatc acatttaagg ccttcaaact
     2341 gaaaatttct acgcctcttc ggctttgctg cggataatca aaagcggcag gtggctttgg
     2401 cgcattaccg tttcggcaaa actgcccatt aaaaggtgca tcagtccggt acgtccgtgc
     2461 gtgcccaaca ccagcaggtc ggcaccgttt tcatcggcat aatcaaccaa atcctgcgcc
     2521 atttcacgcg cacccttatt ggcaaccagc aggtgtttga cggtattttc cacacccagt
     2581 tcccgggcgg tgcgctcggc ggcatccaaa acttcgttgc cttgcgcgac ggcggcggct
     2641 tcgtagcttt cgtgttgcaa aaattcgggg gcgagcgcca tatattcggc aggattggca
     2701 acgtgtacca aagtcagacg cgcaccgttg accccggcaa gctcggcggc atgtttcagg
     2761 gcattgatgg acgtttcact gccgtcaacg gcaacaacca aatgtttgta catatcgtat
     2821 tctccttttg caccgcctcg cggtgccctc ttgtcggatg ggcgcaggga cagtttgcgc
     2881 tgtttcatta tagacccgcc gtcgggcttt atacaacagc cgaacagccc gaccgctttc
     2941 cagtataata tgccgcttcc gtgcagtcag gcattttttg ccggctttcg ttcacttttt
     3001 gatttgacgc aatcttgcag gattcgacca tgtccgacaa cgctttgacc tcttcgcgac
     3061 gcttcggcgg catcgccaga ctctacggag actctgcctt ggcgcacttt tcacaggcac
     3121 acgtctgcgt agtcggcgtg ggcggtgtcg gctcgtgggc ggtcgaggct ttggcgcgga
     3181 cgggcatcgg acgtttgact ttgattgatt tggacaacgt tgccgaatcg aatgtcaacc
     3241 gccagctgca cgccctgacc ggagacttcg gcaaagcaaa agttaccgcc ttgcgcgaac
     3301 gcgtcgccca aatcaaccca gaatgccaag tgtttgaaat tgaagatttc gttaccgaag
     3361 acaatttgcc ggaatacttc ggaaaaggtt ttgatttcgt catcgacgcg atcgaccaag
     3421 tgcgcgtcaa agcagcaatg gcggcttatt ttgtggaacg caaacaaccg tttgtcctca
     3481 gcggcggcgc gggcggacaa aaaaatccgg cgttaatcca aaccgccgat ttgagccgcg
     3541 taacccacga cccgctgctt gccaacctgc gctacacctt gcggaaacgc tacggattca
     3601 gccgcgatac gaaagcaaat atgcgcgtgc cttgcgtgta ttcgaccgaa aatatcgtgc
     3661 cgccgcagtc tagggaggct tgttcggcag atgccgctcc gcaaggcttg tcgtgcgccg
     3721 gctacggtgc aagcatgctc gttaccgctt cgttcgggct atattgcgca caggcggcgg
     3781 tggaacacat cgcagacaaa aaataagcaa tgccgtctga aacaggattc agacggcatt
     3841 tgaacaaact atggttatga tttaagacaa caaaggatac ggataaaaaa taacataaaa
     3901 tatatgattc ctaataatat accaagtatc ggagagctat ttaatggaat tcgttaataa
     3961 tttagttatt ttttcatttt tattactaat gcttattccg atattttttg tagtatatgg
     4021 tatataccat aagatacgtt atcgcaaaat atatatccta agaataagtt ttacattatt
     4081 agtggtaata ctttgcagta tgtattacat atattgccgt tatcttgacc aacaaaaagt
     4141 agcttattat tgcatagatg aacaatgtat ttctattgtt catctataca aagattatgg
     4201 tataaactct cccacatatg cgagaattta cgcaggaaaa atattgttta gatttcaagt
     4261 aagagctaaa aattacgctg aattacttat ggaagatgat atatcaatta gtaaaaaaat
     4321 tttggggaat aaatttatca tttatgggtc gctacctgta atatacggta atgtagataa
     4381 tattgaagta aaagaagcta ctggttatat agatagagcc agtactgatt atattgtctc
     4441 aagaaactta aaattcagac atttatatta attaagaggt tttagcaaga ccgtattcac
     4501 aacctgctcc ttttcaaaac atttgcattt aaaagccgtt ataatgccgt ctgaacatct
     4561 gcccgaccac attatgcgtg aatgccggca gattgttttc ttttgtaaac ttatattaaa
     4621 atccacttac cgattcacgc catgccgccc atccctgccc catccgcacc atccgagcac
     4681 actgtcgcat gggtattcgg ccaacccgtt accgatttgc cccaggattt gtttattccg
     4741 cccgatgcat tgaaagtcgt attgggcagt tttcaaggcc ctttggatct actgctgtat
     4801 ctgatccgca agcagaacat cgatgttctc gatattccga tggtgaagat taccgagcag
     4861 tatctgcact acatcgccca aatagaaacc tatcagtttg atttggcggc ggaatatctt
     4921 ttgatggcag caatgctgat tgaaatcaaa tcgcgcctgc tgctgccgcg taccgaagcc
     4981 gtcgaagacg aagaagccga cccgcgtgcc gagttggtgc gccgcctgtt ggcttatgaa
     5041 cagatgaagc tggcggcaca agggttggat gcgcttcctc gtgcgggccg ggatttcgcg
     5101 tgggcgtacc tgcctctgga aattgccgtc gaagccaagc tgcccgaagt ctatattacc
     5161 gacttgacgc aagcgtggct gggtattttg tctcgggcaa aacacacgcg cagccacgaa
     5221 gtaatcaaag aaaccatctc cgtgcgcgcg caaatgacgg caatcctgcg ccgtttgaac
     5281 ggacacggga tatgcaggtt tcacgacctg ttcaatcccg aacagggcgc ggcttacgtg
     5341 gtcgtcaact tcatcgcact gttggagctt gccaaagaag gtttggtcgg aatcgtacag
     5401 gaagtcggtt tcggagaaat ccgaatcagc ctcaatcatg agggggcaca ttcagacggc
     5461 atttccggca cacggggcgg gcgcgatgtg ttctaatacg ccccaagccg ccaccaaaaa
     5521 tcgggagaca cgccatatga ccggcatcat acattcgctg cttgacaccg acctctacaa
     5581 attcactatg ctgcaagtag tcctgcacca gtttccgcag acgcacagcc tttacgaatt
     5641 ccgctgccgc aacgcctcga ccgtctatcc gcttgccgac atcaaagaag acttggaagt
     5701 cgaactcgac gcgctctgcc ggctgcgctt cacccacgac gaactcggct atctgcgctc
     5761 cctgcgtttc atcaaaagcg actttgtcga ttatctcgaa ctcttccagc tccaacgccg
     5821 ctttgtcgaa gtcggcacag acgataaagg ccgtctgaac atccgcatcg aaggtccgat
     5881 gatacaggcg atgttctttg aaatcttcat cctcgccatt gtcaacgaac tttacttccg
     5941 ccgcctggaa acccctgcag tcatagaaga aggcgaacgc cgccttcaag ccaaagccgc
     6001 gcgcctcaaa gaaatcgccg ccgcacaaaa ccccgacgaa ccgcccttcc tgatttccga
     6061 cttcggcacg cgccgccgct acaagctcgc gtggcaggaa cacgtcatcc gcaccctgct
     6121 cgaagccgcc ccaagcatcg tgcgcggcac cagcaatgtc tttctcgcca aaaaactcgg
     6181 catcaccccc atcggcacca tggcgcacga attcctccaa gccttccagg ccctcgacgt
     6241 acgcctgcgg aatttccaaa aggccgcgct cgaaagctgg gtgcacgaat accggggcga
     6301 tttgggcgtt gccctgaccg acgtggtcgg tatggatgcc ttcctgcgcg atttcgacct
     6361 ctatttcgcc aaacttttcg acgggctgcg ccacgacagc ggcgaccctt acgtttgggg
     6421 cgacaaagcc tacgcccact atcaaaagct caaaatcgac agccgcacca aaatgctgac
     6481 cttctccgac gggctggaca tcgaacgctc ttgggcatta caccaatatt tcaaagaccg
     6541 cttcaaaacc ggcttcggca tcggcaccaa cctcaccaac gatatggggc atacgccttt
     6601 gaatatcgtg ttgaaactgg tcgaatgcaa cgggcagtcc gtcgccaagc tgtccgactc
     6661 tccgggcaaa accatgacca acaacagcac cttcctcgcc tacctgcgcc aagtgttcga
     6721 cgtacccgaa cccgaaacgc cgtaaaccgg cagaaaaagc gcacaattcc tgtttctgcc
     6781 gcataaaatc ttttaaaata ccgcctgatt tgaatttaac cgaaagaccg aacttcatga
     6841 acctacatca aaccgtcgaa cgcgaagccg ccgccgcctt tgccgccgca ggcatcgccg
     6901 acagtcccgt tgttttgcag ccgaccaaaa atgccgaaca cggcgatttc caaatcaacg
     6961 gcgtgatggg tgcggcgaaa aaagccaaac aaaacccgcg cgaactggcg caaaaagtcg
     7021 ccgacgcatt ggcaggcaac gccgtcatcg aaagcgcgga agtcgccggt ccgggcttta
     7081 tcaacctgcg cctgcgcccc gaatttctcg cgcaaaacat tcagacggcc ttgaacgacg
     7141 cacgtttcgg cgtggcaaaa accgacaaac cgcaaaccgt cgttatcgac tattcttcgc
     7201 ccaatctggc aaaagaaatg cacgtcggcc atctgcgttc cagcatcatc ggcgacagca
     7261 tttcgcgcgt gtcagaattt atgggcaata ccgttatccg tcaaaaccac gtcggcgact
     7321 ggggtacgca gtttggcatg ttggtcgctt atttggtcga gcagcaaaaa gacaatgccg
     7381 cattcgagct ggcggatttg gagcagtttt accgcgccgc caaagtgcgc tttgacgaag
     7441 accccgcctt tgccgacacc gcgcgcgaat acgttgtgaa gctgcaaggc ggcgatgaaa
     7501 ccgttttggc attgtggaaa cagtttgtcg atatttcgct ctcgcacgcc caagccgttt
     7561 acgacacgct gggcttgaag ctgcgccccg aagacgtggc gggcgaatcg aaatacaacg
     7621 acgatttgca gcccgtagtc gatgatttgg ttcaaaaagg tctggcagtc gaagacgacg
     7681 gcgcaaaagt cgtgttcttg gacgagttta aaaacaaaga gggcgaacct gccgcattta
     7741 tcgtgcaaaa acaaggcggc ggcttccttt atgcttccac cgacttggcg tgtttacgct
     7801 accgtgtcgg cacgcttcat gccgaccgcc tgctgtacgt cgtcgaccac cgccaagccc
     7861 tgcactttga gcaactcttt accacttcac gcaaagcagg ctatctgccg gaaaacgtcg
     7921 gcgcggcatt tgtcggcttc ggcacgatga tgggcaaaga cggcaaaccg ttcaaaacac
     7981 gcagcggcga cactgtaaaa ctggtcgatc tgctgaccga agccgtcgaa cgcgccaccg
     8041 ctttggtgaa agagaaaaat cccgaattgg gcgcggacga agccgccaaa atcggcaaaa
     8101 ccgtcggcat cggcgcggtc aaatacgccg acttgagcaa aaaccgcacc agcgattatg
     8161 tgttcgactg ggacgctatg ctctcgtttg aaggcaacac cgccccctat ctgcaatacg
     8221 cctacacccg cgtgcaaagc gtgttccgca aaacaggcga atgggatgcg gacgcgccaa
     8281 ccgttttgac cgaaccgctg gaaaaacagc ttgccgccga gctgctgaaa tttgaagacg
     8341 tactgcaaag cgtggcggac acggcgtatc cgcactacct cgccgcctac ctctatcaaa
     8401 ttgcgaccct gttcagccgc ttctacgaag cctgtccgat actcaaagcc gaaggcgcaa
     8461 gccgcaacag ccgcctgcaa ctggcaaaac tcaccggcga cacgctgaaa caaggcttgg
     8521 atttgctggg catcgatgtg ttggacgtaa tgtaaaaccg caccgcccga ttgcggacaa
     8581 cagcctcgcc atccttatcc gaatctgaaa aaagcggcgc gatacaccgt atccgccgcc
     8641 cctcccaaaa tgcgaaacaa acaaacgcca agcaagcaag caagcaagca agcaagcaag
     8701 caagcaagca agcaaaaaat tataaccccc ttcctgccga cgcacgcact ttccgcgcgg
     8761 cgcattcccc tttttccgcc cctcaaaccc gccttttctt caggcagggt ttcagcccgc
     8821 cccctttccc tgttttcctt tccccgacac gcgcgcgcga cccctgccgc atcgtgccgc
     8881 actttcgcgc ccggacggca tcgttccgcc atccggttct ctgtttcaaa tacccctgtt
     8941 tcagaaagaa attctagatg cttcaacaca caggacgaca tataaagcgt cgccctatat
     9001 gttgccctga tttggaaggg gttacgcctc ccaaataaag tctgatcctg ccgccccgaa
     9061 ggacagatgt ccgagtggcg aagtttcaac cgaaaaggaa atacgatgaa tattcacacc
     9121 ctgctctcca aacaatggac gctgccgcca ttcctgccga aacggctgct gctgtccctg
     9181 ctgatactgc ttgcccccaa tgcggtgttt tgggttttgg cactgctgac cgccaccgcc
     9241 cgcccgattg tcaatttgga ctaccttccc gccgcgctgc tgatcgccct gccttggcgt
     9301 ttcgtcaaaa ttgtcggcgt attggcgttt tggctggcgg ttttgtttga cgggctgatg
     9361 atggtgatcc agcttttccc ttttatggac ctcatcggcg ccatcaacct cgtccccttc
     9421 atcctgaccg cccccgcccc ttatcagata atgaccgggc tgttgctgct gtatatgctg
     9481 gcgatgccgt ttgtgttgca gaaagccgcc gccaaaaccg acttccggca cattgccgtc
     9541 tgcgccgccg tcgtggtggc agccggctat ttcaccggcc atttgagtta ctacgaccgg
     9601 gggcggatgg ccaatatctt cggcgcaaac aacttctatt acgccaaaag tcaggcgatg
     9661 ctctacaccg tcagccagaa tgccgacttt attaccgccg gcctggtcga tcccgtcttc
     9721 ctccccttgg gcaatcagca gcgtgccgcc acgcatctga acgagccgaa atctcaaaaa
     9781 atcctcttta tcgtcgccga atcttggggg ctgccggcca atcccgagct tcaaaacgcc
     9841 acttttgcca aactgctggc gcaaaaagac cgtttttcgg tttgggaaag cggcagtttt
     9901 ccctttatcg gcgcgacggt cgaaggcaaa atgcgcgaac tgtgcgccta cggcggtttg
     9961 cgcgggtttg cactgcgccg cgcgcccgac gaaaaatttg cccgctgcct ccccaaccgt
    10021 ttgaaacaag aaggttacgc cacctttgcg atgcacggcg cgggcagttc gctttacgac
    10081 cgcttcagct ggtatccgag ggcgggcttt caagaaatca aaaccgccga aaacctgatc
    10141 ggtaaaaaaa cctgcgccat tttcggcggc gtgtgcgaca gcgagctgtt cggcgaagtg
    10201 tcggcatttt tcaaaaaaca cagcaaagga ttgttttact ggatgacgct gaccagccac
    10261 gccgactatc ccgaatccga cattttcaac cacaggctca aatgcaccga atacggcctg
    10321 cccgccgaaa ccgacctctg ccgcaacttc agcctgcaca cccaattttt cgaccaactg
    10381 gcggatttaa tccaacgccc cgaaatgaaa ggcacggaag tcatcatcgt cggcgaccat
    10441 ccgccgcccg tcggcaacct caatgaaacc ttccgctatc tcaaacaggg gcacgtcgcc
    10501 tggctgcact tcaaaatcaa ataacaacaa tgccgtctga acgcaccaac agccttcaga
    10561 cggcattttg cagacagacc gacccctcaa gcccactttt tcatcatttc cgataaattg
    10621 ctt
//
LOCUS       DBBZYD010000071        10338 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.071, whole genome shotgun sequence.
ACCESSION   DBBZYD010000071 DBBZYD010000000
VERSION     DBBZYD010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.071"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            83..1267
                     /gene="coaBC"
                     /locus_tag="ACJJDL_001519"
     CDS             83..1267
                     /gene="coaBC"
                     /locus_tag="ACJJDL_001519"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HGG7574203.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAGYL
                     NK"
     gene            complement(1334..3490)
                     /locus_tag="ACJJDL_001520"
     CDS             complement(1334..3490)
                     /locus_tag="ACJJDL_001520"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG7574204.1"
                     /translation="MPVPQPTAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTVAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGENLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGKHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3583..3789)
                     /gene="rpoZ"
                     /locus_tag="ACJJDL_001521"
     CDS             complement(3583..3789)
                     /gene="rpoZ"
                     /locus_tag="ACJJDL_001521"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HGG7574205.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3848..4465)
                     /gene="gmk"
                     /locus_tag="ACJJDL_001522"
     CDS             complement(3848..4465)
                     /gene="gmk"
                     /locus_tag="ACJJDL_001522"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HGG7574206.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4593..5192
                     /locus_tag="ACJJDL_001523"
     CDS             4593..5192
                     /locus_tag="ACJJDL_001523"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HGG7574207.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5238..6026)
                     /locus_tag="ACJJDL_001524"
     CDS             complement(5238..6026)
                     /locus_tag="ACJJDL_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HGG7574208.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPP
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVGALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPSVDEDGVLRGLQDLGVI"
     gene            6351..7706
                     /gene="yegQ"
                     /locus_tag="ACJJDL_001525"
     CDS             6351..7706
                     /gene="yegQ"
                     /locus_tag="ACJJDL_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HGG7574209.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRSIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLTGHSIAKQSQYVGHVTEIDAEGWATVEVKNR
                     FAIGDSLEIIHPSGNQTIKLEQMARKGQPVDVAPGNGIQVKIPNMRGKEKALIARVLN
                     P"
     gene            7840..8316
                     /locus_tag="ACJJDL_001526"
     CDS             7840..8316
                     /locus_tag="ACJJDL_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HGG7574210.1"
                     /translation="MLAACQSGSAPKNAHTASPGTPAGESCKVIRGDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGIGKSDSEAYERA
                     LINAARKFQQTAGKLGGRGVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
     gene            complement(8646..8831)
                     /locus_tag="ACJJDL_001527"
                     /pseudo
     CDS             complement(8646..8831)
                     /locus_tag="ACJJDL_001527"
                     /inference="COORDINATES: protein motif:HMM:NF013466.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            complement(8847..9455)
                     /locus_tag="ACJJDL_001528"
     CDS             complement(8847..9455)
                     /locus_tag="ACJJDL_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7574211.1"
                     /translation="MSNSSFKLSALAIACGLALSACSSGGGDAPSVKPTPTVPGASNP
                     APANPEPSAPAASPLKTGELGEKYFYGEGEITKLVINGETINLTVADEQLSRRVKLWT
                     DFDKIITSQGFENLIYGAAKLADGSYALFVQGKLSDSLPGDTVTYSGDVLHFRSRNLT
                     EGNWFNEGNSFRAAGSFTATVNFAGKSLNGKINSGDGLYMGT"
     gene            complement(9649..10278)
                     /locus_tag="ACJJDL_001529"
     CDS             complement(9649..10278)
                     /locus_tag="ACJJDL_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HGG7574212.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKKLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
BASE COUNT         2603 a         2800 c         2443 g         2492 t
ORIGIN      
        1 ttgtatccaa acggtatcta atgtatccac actttgttat agaatggctg ctgttttttc
       61 ttcgtaatta gaaattgtca aaatgggcaa acatattctt ttaggtgtaa cgggcagtat
      121 tgcggcgtat aagtcttgcg agttggttcg tctgctgaaa aaacaggggc attcggttac
      181 ggtggttatg agccgctcgg caactgaatt tgtttctccg ctgacttttc aggctttaag
      241 cggcaatcct gtcctgaccg acacgcacgg cggcaacggt tcaaacggta tggaacatat
      301 caacctgacc cggaatgcgg atgtttttct gattgcgccg gcaagtatga ataccgtggc
      361 aaaaatctgt aacggcgtgg cagataacct actgaccagt ctggcagccg cacggaaatg
      421 tccgcttgcc atcgctcccg cgatgaatgt ggaaatgtgg ctcaaccctg ccaaccaacg
      481 gaatatcgca caactggttt cagacggcat tactgtctat atgccgggct tgggcgaaca
      541 ggcttgcgga gaaaatggca tgggaaggat gccggaacct gccgaattgc tggatttgct
      601 tccggacttg tggacaccga aaattttaag gggcaagaaa atcttgatta ccgcaggtgc
      661 gacatttgaa gccattgacc ctgtcagggg catcacaaat acctccagcg gaaaaatggg
      721 ggtagctttg gcgcgggcgt gccgtgccgc cggtgcggaa gtcagcctga ttcacggaca
      781 gcttcaaacc gcgctgcctt tcggcatatc cgatacggtt caagccgtca gcgctgaaga
      841 tatgcatcgc gcagtgcatc gtttgattga aaaacaagat gcttttattt ctgttgccgc
      901 cgtctcagac tataaggtta aaaacaagag tacgcaaaaa ttcaaaaaag ataaaaatgc
      961 caaaccgtta tccatcgaat tggatgagaa ccccgatatt ttggcttcta ttgcctcatt
     1021 gccgaacccg ccgttctgca tcggttttgc cgctgaaacg gagaatgtaa tggcatatgc
     1081 acgagaaaaa cgtattaaga aaaaaatacc ggtgatagtt gccaatgatg tttcaatcgc
     1141 gatgggcaaa ccgaccaacc ggattaccat tatcggggac gacggggaac tatcttttcc
     1201 cgaaacaagt aaagatgaag cggcgatgca gattgttgaa aggcttgccg gatatttgaa
     1261 caaataagca attgaacgga taaaccataa agcgggttgc ctgttaatca aaaggcaacc
     1321 cgttttacct gcttcaactt ctgatgactt tgcggatata tggaatacta tgcagatttt
     1381 gaataatctg attcaattga ttcagattct tgactttcaa taagaatttg aattcgacaa
     1441 aaccttccgt tcccgactgg gatttagacg gtgtttcgac cgactcaatg tccgcaccgg
     1501 aatcggaaat cgcttgcgcc attaatgcca acaggccgtg gctgtcttcc gattggactt
     1561 gaagcccgac acggtagttc tgcccgttca tattttccca gtctgcatcc agctgctgtt
     1621 cgggatcgga cttcaacaac gtcgggcagg tatctctgtg gataatcatg ccttttccct
     1681 taaccaacag caaacggatg gaatcgccgg gaacagggtg gcagcactct gcaaaatgaa
     1741 tatgcccgct ttcctgccca tcgactttaa tggaactgag cctgacctca ctaccgaaat
     1801 gctttcctgc caattcggca atatgcatag cgacataaac aggcagggta tgccccatac
     1861 cgacgttgta cagcacttcc tcaaatgaag tctgtttatc gttgagatcg gcaaggtatt
     1921 tttctttgat gccgtctgaa agcaggacat ctttgggcag caaactggac agggcttttt
     1981 gtaagaggtt ctctcccaaa acgaccgcat cgtgccggtt aaggttttta atatattggc
     2041 gtatggcact gcgcgccctg cctgacacgg cgaaattcaa ccacgcggga ttgggtttgg
     2101 cgtgttcgga tgtaataatt tcgacggaat caccggtttt gagcttcgta cgcaacggca
     2161 tcatgatatt gttgatacgt gcggcaacgg ttttgtgccc gatatcggta tgcaccgcat
     2221 aagcaaaatc gacaggcgtt gcccctttgg gcaaagttag gatttttcct tttggcgtaa
     2281 ggatgtagat ttcgttcgga aacaaatcga ctttgacgtg ttcgagaaac tcaatggcat
     2341 tggcactgct tgcctgcaaa tctaagatat ttttcagcca ccggtttgtg tgaagcaccg
     2401 cctgatcgac cgtcttagaa tatgatttat agctccaatg tccggcgatt ccaccttcgg
     2461 caacagcatc catttccttg gtacgtatct gaacttcaat cggcaagccg taaggaccga
     2521 ccaaagtcgt atgcagactt tgatacccgt tgcttttcgg aatggcgata tagtctttga
     2581 accgcccggg cttgggctga tagagggtgt gcaatgcgcc gagtgcggca taacaggctg
     2641 gaatgctgtt gacaatgacg cggaaaccgt aaatatccat aacctcggca aagcgcagct
     2701 ttttcgccat cattttctga tggatgccgt acaggttttt ttccctgcct ttgattttgg
     2761 cctctatatt cgcgcctacc agccgctggc cgaatgcgcg caagactttg ccgacaacgt
     2821 cctgccggtt cttccggctc ttgtccatcg ctttttttaa agtctcgtag cggttgggat
     2881 gcaggttttg gaacgataaa tcctgaagct cttgatatgc gttattcaaa cctatgcggt
     2941 tggcaatctg tgcatagatt tcaagggttt cccttgcaat ccggcggcgt ttgtccgggc
     3001 gcatcgaacc gagtgtccgc atattatgca gacggtcggc aagtttgacg acgatgacgc
     3061 gtacatcttt ggtcattgcc aaaatcagtt tgcggaaact ctccgcctga tgctctgcat
     3121 gatcttcaaa tttgagtttt tcgagtttgg acagcccgtc caccatctcg gcaaccgtat
     3181 tgccgaacac cgccgccatt tccccttttg tcacgcccgt atcttccaat acgtcgtgca
     3241 tcacgcctgc acaaagaccc tgtatgtcca tatgccaaag ggcgagctgc gtcgcaacgg
     3301 caatcggatg cgtgatgtag ggctccccgc ttttgcgggt ttgcccgtcg tgggcgcgaa
     3361 acgcataggc gacagctttt tcaagctccg cctgttcctc gggcttgagg taggaggcgg
     3421 tatggaaaag cagggcacgc gcttcggcgg tcagggggtc gtaaggtgcg gtgggttgag
     3481 ggacaggcat ttcagacggc tttcggaaca tattttattt ttcgtttcaa accgtcggac
     3541 tgcacggcgg cagaatgtgc cgacgtgcgt ttccggcaga atttatttat tgcgcgtcaa
     3601 cagttccgta ccgatatgcc cggcggcgat ttcccttaag gcggtaacgg tcggtttgtt
     3661 attgcggaca tcgtccacaa gcggcgtatt gccattttca agctggcggg cccgacgggc
     3721 cgctaccaat gtcaggtcaa aatggttgga aatttttccg gtacagtctt cggtggtaat
     3781 acgtgccata ttatttgctt tctttcaaaa atatttaaaa taggaaactg ggtattttcg
     3841 cggtttttta ggaattttcc aacaaatctg caataaatcc cagttgccgc gaccttttca
     3901 gacggcaggc attcacaata tggcgcaaat cctcctccgc ccgcgccaag tcatcattga
     3961 ccacgacaaa atcgaacaat acggactgtt cgatttcatg ccttgccttc gacagcctcc
     4021 tttggataac ttcccgactg tccgtcccgc gtccgttcag acgtgcagca agcacatcga
     4081 aagacggcgg caggataaag atgccgacgg cttccggcag cgcgttgcga acctgcgccg
     4141 cgccctgaac gtcgatttcc aaaattacgt catagcctgc cgccgccaaa gcattcacgc
     4201 cctccgcgct tgtgccgtaa tagttgccga acacgtctgc gtattccaaa aaagcttcct
     4261 gcgcgataag cgactcaaac tcttctttag aaacaaaatg ataatgtacg ccgtttactt
     4321 cgccttcacg cggcggacgc gtcgtgtgcg atacggaaac gcgcaaaccg ttatggtttg
     4381 ccaacagccg cgacaccagc gtggttttgc ccgtgccgga agcggccgaa atgataaaga
     4441 tgttgccttt tcgataagcg gacatatttt ttacctgtat attttccagc cgattgtatc
     4501 acaacggaca ctcggtttcc tatttgccga tgcccatatt ttgccgctat tgttttgatt
     4561 gatttggcaa gcggcaggct gacggctaca atatggcgtt aaaaacatca aacttggaac
     4621 acgcaatgct ggttcatccc gaagctatga gtgtcggcgc gcttgccgac aaaatccgca
     4681 aaatcgaaaa ctggccgcaa aaaggcatct tattccacga catcacgccc gtcctgcaaa
     4741 gcgcggaata cttccgactt ttggttgatt tattggttta ccgctatatg gatcagaaaa
     4801 tcgacatcgt tgccggtttg gacgcgcgcg gcttcattat cggcgcggca ctcgcctacc
     4861 agctcaacgt cggtttcgtc cccatccgca aaaaaggcaa gctgcctttt gaaaccgtat
     4921 cgcaaagcta cgcgctcgaa tacggggaag ctgcggtgga aatccacacc gatgccgtca
     4981 aacccggttc gcgcgtgctg ctggtcgatg atttggttgc cacgggcggc acgatgcttg
     5041 ccggactgga gctgatccgc aaactcggcg gggaaattgt cgaagccgcc gccattttgg
     5101 aatttaccga ccttcaaggc ggcaagaata tccgtgcaag cggcgcgccc ttatttaccc
     5161 tgcttcaaaa cgaaggctgt atgaagggct gaaaaccgac cctgccgtct gaaaccggca
     5221 gggttgttat tatgcgttca aatcacgccc aaatcttgca agcccctcaa cacaccgtcc
     5281 tcatcaacgc tggggcaaac atatttcgcc gcctctttcg ccgcctgttc cccgttgccc
     5341 attgccacgc cgaacccgac ttctgacagc atttccacat cgttcaaacc gtcgccgaac
     5401 gccatcacgt ctgccatttc caaacccaat gccccaacca cgcttctgat gccgtctgtt
     5461 ttcgacattc ccgcaggcag cagatcgacc gcttcctcgt gccagcgcac cgttttcaag
     5521 ccttcccgtt ccacaatatc cgaccagggc ggcatttcgt tttcctccgc aaacaccagc
     5581 atctgataca ccggtttgct tgaaaaataa tccttatcgg caaaaaaatc gctggcgata
     5641 tgctgcaagg cgcggcacac gcattccgac agcgcggaca cggcgatccc ctctccgccg
     5701 acaaacgcat aatccatgcc caagccatcc aaatgcgcgc aaaccctgcc catcaaaccg
     5761 gcatccatcg gtacttcgcg cacagtttta ccgtgcagca gcgcaaactg tccgtttatc
     5821 gttaccacgg catccatacc cgtttccgcc atcatgtccc tgaccttttc gggaatcgtc
     5881 gccaaagacc gccccgttgc caacgccgtc aatatgcctt tgccgcgcaa agccgccacc
     5941 gccgttttca cggaaggacg caaggtatcc gtatatttgc ggtacagcgt atcgtcaata
     6001 tcgaaaaaca cgattttagg attcatcaca ttctctctcg cattcaaact gccgcattgt
     6061 atcccaatca ggcaaatact tgataaatcc ttataaattt cccggcaaaa ttgaccgcga
     6121 acacgaaaag gcggataatc cgcccatcct caaacccttt tcagacggca tttgcagcaa
     6181 tgccgtctga aacattttta caaagcacac aaatcatgtt tcaacacaca ggacgacaca
     6241 taaagcgtcg ccctatatgt tgccctgatt cggaaagggt tacacccctc ccaaataaag
     6301 tctgattcta ccgccctaaa gggcggggtt tcaaccgaaa aggaaacacg atgaaagcac
     6361 ccgaactctt attgcccgcc ggcggattgg aaagaatgcg cgccgcctac gattacggcg
     6421 cagatgccgt ttacgccggc agcccgcgtt actcactgcg cgcccgcaac aacgaatttg
     6481 ccaaactcga cgttctcgaa caaggcatta aagaagcgca cgagcgcaac aaaaaattct
     6541 tccttaccgt caatacgctg ccgcacaact ccaaactcaa aaccttcgtc tccgatatgg
     6601 agcccttgat tgcgatgaag cccgacgcgc tgattatggc ggatccgggt ttgattatga
     6661 ccgtgcgcga aaaatggccg gaaatgccga tccacctgtc cgtacaagcc aacaccacca
     6721 actactgggg cgtgaaattc tggcagaata tcggcgtcga acgcatcatc ctgtcgcgcg
     6781 aattgagtat ggaagaaatc gccgaaatcc gccaacaatg ccccgacatc gaactcgaag
     6841 tcttcattca cggcgcattg tgcatcgcct actccggccg ttgcctactc tccggctact
     6901 tcaaccaccg cgaccccaac caaggcacct gcaccaactc ctgccgttgg gactacaaag
     6961 tccacaacgc tacggaaagc gatgcgggcg atgcccagct tctgcaaggt ttcaactttg
     7021 aaaaagccca agaagaagcc aaccaaaact ttgaaggcat caacggtcaa aaacgccatc
     7081 cctacgccga caaagttttc ctgattgaag agtccaaccg cccgggcgag atgatgccga
     7141 ttatggaaga cgaacacggc acctacatca tgaactccaa agaccttcgc agtattgaag
     7201 tggttgagaa actcgccaaa atcggcgtgg acagcctcaa agtcgaaggc cgtaccaagt
     7261 cgctctacta cgttgcacgc gtggctcaat cctaccgcaa agcgattgac gatgccgttg
     7321 caggccgtcc gtttgattac agcctgttga gcgaactcga aggcctcgcc aaccgcggct
     7381 acaccagcgg cttcctcgaa cgccaccaaa cccaagacta tcaaaactac ctgaccggcc
     7441 actccatcgc caaacaaagc caatatgtcg gccacgttac cgaaatcgac gctgaaggtt
     7501 gggcaacggt ggaagttaaa aaccgctttg ccatcggcga ttcgctcgaa atcatccacc
     7561 cgagcggcaa ccaaaccatc aaattggaac aaatggcccg aaaaggccag cctgtcgatg
     7621 ttgcacccgg caacggcatc caggtcaaaa tccccaatat gcggggcaaa gaaaaagccc
     7681 tcatcgcacg cgtattgaac ccctgagcca caatgccgtc cgaaccccgt tttcagacgg
     7741 cattttgttg aatcttacgg tacaatggca atgatttccc accgcaagca aggatatccg
     7801 acatgaaaaa aaatcctcat actctccgcc gccgccctga tgctggcagc ctgccaatcc
     7861 ggcagcgcac ctaaaaacgc gcacacggca tcccccggca caccggccgg agaatcatgc
     7921 aaagtcatcc ggggcgacac cgcaggaagc ggcaaaaaca tcatttaccg ttgctgcaac
     7981 ggtcaggcgg caataaatgc agccattgca gacggcgtat tggaatcagg gattcccgtc
     8041 agcttcggcg gcgggggcgt accggttgca aacggcagga atctagttac ccgtcaggcg
     8101 gcaaacggca taggcaaatc cgactcagaa gcctacgaac gcgccctaat caatgccgcc
     8161 cgcaaattcc aacagaccgc aggcaaactc ggcggacgcg gcgttaccgg cttccacagc
     8221 tactttgaca agcaaccgct gcaaggcggg caatacgact gtcaggcagg ctcgttccac
     8281 gtccgcgtcg tcatgcgcgc caatgtcgtc cgttaacata tcggcaatca aaaaatgccg
     8341 tctgaaaccc gttttcagac ggcatttttt caggctttac cggcaattcc ttcaacatcc
     8401 cactccggct gtgactgtaa cactgtagca gcaaggtata cggatatata gtggattaac
     8461 aaaaatcagg acaaggcggc gagccgcaga cagtacaaat agtacagcaa gacgagccaa
     8521 cgctgtactg gtttaaattt aattcactat attatcactt tccgtcatcc taaccatata
     8581 atatcaaaca aaagccccgg tctatccgca ccggggcttt cgtcaaatca aggattcaaa
     8641 cgggattatt gggttttctt accaccaaat acgccgaagc tgttatttgt atatgtcttg
     8701 gcctgttttg gttcatcctt aacatagctg tacctgcctg ccatttctgc agccttggca
     8761 ccatagaatc ctccagagat actacctttc tcaccgtttt tccaagtacc ggtaaagcgg
     8821 ttgccatcaa gacttccctc gaattcctag gtacccatat acaatccgtc accactgtta
     8881 atcttaccgt tcagggattt accggcaaaa ttgacagtag cagtaaacga accggctgca
     8941 cggaatgaat taccttcatt aaaccaatta ccttcggtca agttgcgcga acggaaatgc
     9001 aatacatcgc cgctataagt aaccgtatcg ccgggcagac tgtcgctcaa ctttccttgc
     9061 acaaagagtg cgtatgaacc atctgccaat ttagccgcac cataaataag attttcaaaa
     9121 ccttgggaag taataatctt atcgaagtct gtccaaagct tcaccctcct tgacagctgt
     9181 tcatcagcca ctgtcaaatt aatagtttcg ccattgatga ccagcttcgt gatttcacct
     9241 tccccgtaaa aatatttttc acccaactca ccggttttca atggtgaggc agccggtgct
     9301 gaaggttcgg gattggcagg cgccgggttt gatgcacccg gaacagtcgg ggtaggctta
     9361 acacttggcg cgtctccgcc tcccgaacta caagctgaaa gagctagacc gcaggcgatg
     9421 gcaagtgcac tcaatttaaa tgacgaattc gacataacat tctcctaatg acatggataa
     9481 caaaaataag ttcatcctct tttacgaaaa ggcatgatgc ttattcataa atttattgaa
     9541 aaaaaatttc aagttttcat agtcggttgc aaatatgttc cggcaaacag ctgcgtatca
     9601 tataaagcgc aactccataa aaacaccgat acctgatttt tgcattactc aatgcctgtg
     9661 cggcatcatt ccttccggcg cttcggcatc agcggccaag ccaaaggttt cgcgcaacac
     9721 gactttgtaa aatgcaaagg cttcgcgcgc gccttggatg gcttccgctt cggcttcggg
     9781 agtcaggttc aaagcgttca gatgctcgac gaaggcgcgc cagtgtttgc cgcgaccgtc
     9841 gggatgggga gcgaggtggc gcgcgccgtg ttcgccgttg taatcgagtt tttgggcgtg
     9901 tttgaacaaa aacgccgcgc ccaaattgga accttcggcg caataaagcc agccgattgc
     9961 tttgttgccg gtttcgtgtg gcaatttttt gtcgaatttg taaggctctt cgcccaagtc
    10021 tttcaagtct tgcgttacgg catcgtatcg cgccatatat tccagctcgg gaatggcttt
    10081 gtttaattcg gcatctttat agatgtggtc gacggccttg tggaaaacgg attggagttt
    10141 caaaaattta atgtagtttt ctttgctgac aaacggttgg acagacataa cgaggttatc
    10201 cacgctgtcg tgaaccgccg tggtatccgc cttcagacgt ttggcaaacg tcagggcttg
    10261 attttcggtt tcactcataa gttttccttt gtcggtaagg gataaggatg cggggcgggc
    10321 aaaatccgca cttgcccg
//
LOCUS       DBBZYD010000072        10197 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.072, whole genome shotgun sequence.
ACCESSION   DBBZYD010000072 DBBZYD010000000
VERSION     DBBZYD010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10197)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10197)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10197
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.072"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(64..1206)
                     /locus_tag="ACJJDL_001530"
     CDS             complement(64..1206)
                     /locus_tag="ACJJDL_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HGG7574213.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIATGRA
                     PGMMRRFGFEKLQNFDKTLWADLRRRAEAQTRPVRAPIAGSDSDRRIVQTALDNARSA
                     EVDDIVSFGVADAQSVRPNGENGIMVSNPPYGVRLEEVHALQALYPQLGTWLKKHYAG
                     WRVGMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1255..1677)
                     /locus_tag="ACJJDL_001531"
     CDS             complement(1255..1677)
                     /locus_tag="ACJJDL_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574214.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1670..2479)
                     /locus_tag="ACJJDL_001532"
     CDS             complement(1670..2479)
                     /locus_tag="ACJJDL_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HGG7574215.1"
                     /translation="MIQDTRPLIRVVAGILLNRDGDYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALRREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPGQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEHADSVWMVVQTREQWRQAQEKGADAVVWRVCDDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2561..2938)
                     /gene="acpS"
                     /locus_tag="ACJJDL_001533"
     CDS             complement(2561..2938)
                     /gene="acpS"
                     /locus_tag="ACJJDL_001533"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HGG7574216.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAVRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3138..3905)
                     /locus_tag="ACJJDL_001534"
     CDS             complement(3138..3905)
                     /locus_tag="ACJJDL_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7574217.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFIMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMILFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIAKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3915..4694)
                     /locus_tag="ACJJDL_001535"
     CDS             complement(3915..4694)
                     /locus_tag="ACJJDL_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HGG7574218.1"
                     /translation="MNQKYILSANNNSLIEEIHNTVQRIGYCIVRGLNLNHLDDSRRN
                     KKLFDFLSQLGMLTNHKDDGFKSIFWDIKYRGDDYVINNDITFSEDVGECPLHSDSSF
                     SENPESYLVMYVVKSANDGGNSLFLSSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPA
                     SFDKKQGVRWGNILSVNTQMIRFRSDCIYKGIEENRNKVSKEMVLALDYLINVIKNAS
                     DIQEFSAQDDGLIIIDNVNGLHARTDYTDKNRHYIRARITV"
     gene            complement(4741..5469)
                     /gene="pdxJ"
                     /locus_tag="ACJJDL_001536"
     CDS             complement(4741..5469)
                     /gene="pdxJ"
                     /locus_tag="ACJJDL_001536"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HGG7574219.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQDKIAEFTKILTDAGIRVSLFIDADDRQIQAARDVGAPVVELHTGAYADAR
                     SHAEQIRQFERIQNGAHFASDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLISQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(5493..6284)
                     /gene="recO"
                     /locus_tag="ACJJDL_001537"
     CDS             complement(5493..6284)
                     /gene="recO"
                     /locus_tag="ACJJDL_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HGG7574220.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLK
                     LTVREDPLPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTI
                     AAGGTYLVRPETAVFPVGKGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(6318..7445)
                     /gene="pheA"
                     /locus_tag="ACJJDL_001538"
     CDS             complement(6318..7445)
                     /gene="pheA"
                     /locus_tag="ACJJDL_001538"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HGG7574221.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(7484..8716)
                     /locus_tag="ACJJDL_001539"
     CDS             complement(7484..8716)
                     /locus_tag="ACJJDL_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HGG7574222.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLIVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQHFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHNGSATVMAVTMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
     gene            complement(9236..10090)
                     /locus_tag="ACJJDL_001540"
     CDS             complement(9236..10090)
                     /locus_tag="ACJJDL_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HGG7574223.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         2451 a         2774 c         2658 g         2314 t
ORIGIN      
        1 atcggccgga tattaaaaaa agccgtctga acatttttca gacggcattt ttgtacactt
       61 tcctcaacgg ttcgatccct gcaccatatc aatcaggaac aggcggcaat cgaggttgcc
      121 gttataaagc ggaattttgc gttttggcga caggcgcatg aatttgggca tttccctgtc
      181 gccggtaaac atgccgaccc gccagccggc atagtgtttt ttcaaccacg tacccaactg
      241 cggataaagc gcctgcaaag cgtggacttc ctcaaggcgc acgccgtagg gcggattgga
      301 caccataatg ccgttttcgc cgttcggtcg gacggactgc gcgtcggcaa cgccgaagga
      361 aacgatgtcg tccacttcgg cactgcgtgc gttgtccaat gccgtctgaa cgatgcggcg
      421 gtcgctgtcg ctgcctgcaa tcggggcgcg gacggggcgg gtttgcgctt cggcgcggcg
      481 gcgcaaatcc gcccacagcg ttttatcgaa attttgcagt ttttcaaaac cgaagcggcg
      541 catcatgccc ggtgcgcggc ctgtggcaat ccaagcggct tcgatagcaa tcgtgccgct
      601 gccgcaaaac gggtcttgaa acggctgcgt gccgtcgtag cctgccgaga gcagcagtcc
      661 ggcggcaagg ttttcgcgca gcggggcttc gccggtatcg agacggtagc cgcgtttgaa
      721 cagggcttcg cccgaagtgt cgatgaagat ttcgacattg cgttcgtcca aaaaggcgtg
      781 gatgcgaaca tcgggcgcgg ctttgtccac gctcggacgt gcgtcgtaaa tgtcgcggaa
      841 agcgtcgcag acggcatctt tgacggtcag tccgacaaat tggatgctct taacgttggc
      901 acgctttgcc tcgactttga ctttgaacgt ctgctgtaaa gtaaaccaat taaaccagtt
      961 gatatttttg gcgagtttgt agatgtcgcg ctcattgcgg tatgtccctt tggtcaggcg
     1021 cagcaggata cggctggcag tacgcgaatg caggttggcg gcgtaaacct gttccaatcc
     1081 gccccggcag gaaacgccgc cgtcaaacac ttgtacatcg gtacagccga ggctttcgag
     1141 ttcttgagat aaaacggtct ccaagccgcg cgggcaggtg gcgaaaagtg tatataaagt
     1201 attcataacg tgtcctttcc ggacggatgt tccggcaatg gcggattgaa aggtttattc
     1261 ggcggtaaat gccgtctgaa atgtccgact gccgattgta atgtccgccg taaaatcgcg
     1321 cctgccttcg acacagatgg gcaggcggat gcgtactgcc tgccaagtcc ccgacggttg
     1381 ccgctcgaac atatagcggt tgaaacccat atccatattt ttcatactga agctgatgct
     1441 gacctgttcc gtgccggcgg gcgcgtgttc gatataaata tcaaacggtt ttttggttga
     1501 aacggcggcg gcgcggacgc ggcttccgtc cggcagcgtg caaccctcgg tcaaatcgca
     1561 ttgcgccgcc acagcttgcg gctgctgcgc ctgccaccat tgcaacaaaa cgagcttgac
     1621 ggcggcaaag gcaatcagca gcagtgcggc aagcagtaat ttacggtttt tattcatgat
     1681 tcttccctat tgtttcatcc cttaccacca cgtgcgcccc caatccgagc catagttttc
     1741 cataacgtgc aaccgtctgt ccgtttgctg caagtacgag cggcacggat acgccctgcc
     1801 gcagggcttc tgccgcctct tgtgcctgaa catcatcgca cacgcgccaa acgaccgcat
     1861 ccgcgccctt ttcctgcgcc tgccgccatt gttcgcgggt ctgcaccacc atccacacgc
     1921 tgtcggcgtg ttcgggtctg tcctgccatt gcgccgcctc catcaaaacg ttcgcaccgc
     1981 ttccctctgc cgaacccaaa ggcaggacgc ggtacgcgcc catactgttc tccccgtgca
     2041 aacccgtttt caggctgccg tacaaacggc gcggaacgga cagcgaacgc aaaagcgcgc
     2101 cgttggcggg cagcatgggg gcaacggtaa aatcacccgc cttctgccaa gaccattcct
     2161 gcccttcgcg ggattgcggt tcgcccgtcc attggccggg gttgacccat aggaatttca
     2221 ggcagacgcg ggcgtgttcg taggaatgga ttttggtcag ccaaggcgtg gcggcgagga
     2281 tgcggatgcc gagttcttct tcaaactcgc gccgcagggc ttggaagtcg gtttcgcccg
     2341 cttcgacctt gccgccggca aattcccaat atccggcata gggtttgcct tcggggcggg
     2401 aactgagcag gtagtcgccg tctcggttga gcaggatgcc ggcaacgacg cggataaggg
     2461 gtcgggtgtc ttgaatcatg gcgggtacgc ggttggtcgg tcggagtgca aatgagggac
     2521 gggcaatgcc gtcaacgggt ttgccgcatt tcagacggca ttatttttcg gcaacgacaa
     2581 acgccaatac ggtgtcttct tcgtcgctca tgctgaggct gacgcggctg atgccttgtt
     2641 cctccagcca tttggacagg gcggggccgt agaaaaattc gggcttgccc aatgcgtcat
     2701 gcccgatgcc gatgttgcgg aaggaaaccg cgccgcgtat gcccgtgccg acggctttgg
     2761 caaaggcttc tttggcggca aagcgtttgg caaggtagtt gacgggtttg cccgcctgag
     2821 gaaattcaag cagctcttcc ggagtgagga tacgcacggc aaacgcctgt ccgaattttt
     2881 tgtttaagcg gatgatgcgc ttgagggaaa cgatgtctgt accgatgccg taaatcatat
     2941 ttgcgctcct tcgcccttgg ttgcgggtag tgatgaatgt gatgatgaat gccgtcaatt
     3001 tcttggggcg ttaaaatggc gtgaatatcc actttcgggg ttttgtcggt aacaattttt
     3061 attgtaacct tttgcatttg aaattctaaa acatcgtgcc aattatttaa taaggagtta
     3121 aggcatttaa taatgaatta aagtttgatt aaacccgaat gcccgatttt cagagccaat
     3181 accaataaaa caataaaaat taacatttta aaaaaatttg ggctaatctt agtccttaac
     3241 cgaattccaa catacaatcc aataacagac aatacggaca gtaaaaatat taaaccgtat
     3301 tcactcttat ttaataacca atactggtct cttagcatat atatttgaac aattttcgcc
     3361 aaaagatagc atagattgct tgattttgcg atacgatttt tattctctgt ttcgctaagc
     3421 aaaaatatta acaatatggg agacatggca ttggttgaac cgccgatgat gcctgccaaa
     3481 aacccaaaaa gaatcatatt cttattattg gcaactactt gaatattttt tgcttttgca
     3541 catacattta aaataccatt aacagaataa tacaatgtaa tgattgccat cagtaaaagc
     3601 agccacgaca ctggaagtat caaaagcaac ttcaccccca aaatgctgcc aacgacgctg
     3661 ccgatagcaa gcaatttata ggtttttaaa taataaacaa tctcttgcca aaaacccttt
     3721 ttgttattgc tgcatagaac caacaagctc attaacaggc ttggtaatgc caccaaggca
     3781 acaaccttag acaatggcat gataaaagcc aatgcggttg taccgagcat cggaaatccc
     3841 atgcctgtaa ttccgtgcag tattgcggca gcaacaaaaa cgatagattg cattatttct
     3901 tgcataaccg tcctttatac agtaattctt gctctaatat aatgcctgtt tttatccgta
     3961 taatcagttc tggcatgcaa gccattgaca ttgtcaataa taatcaaacc atcatcttgt
     4021 gcagaaaatt cttgaatatc actcgcattt tttataacat ttataagata atcaagtgca
     4081 agtaccattt cctttgatac tttatttcta ttttcttcaa tacctttata gatacaatca
     4141 cttctaaatc taatcatttg agtattgacc gataagatat taccccatct cacaccttgt
     4201 tttttatcaa atgatgctgg tgttttaaat ggatataaat tgcccgttaa tgtttttaag
     4261 tgttttttac cggtttctgt tttagataac tgattgacaa tatctgatga acttaaaaat
     4321 agggaattac ctccatcatt ggctgatttt actacataca taaccaaata actttccggg
     4381 ttttcactaa aagatgaatc actatgaagt ggacattctc caacatcttc cgagaaagtt
     4441 atatcattat ttattacata gtcatcgccg cgatatttaa tatcccaaaa tatagattta
     4501 aaaccatcgt ctttgtggtt tgtcagcatt cctaattgag atagaaagtc aaataatttc
     4561 ttgtttctcc ggctgtcatc aagatggttt agattaagac cgcgaacaat acaataccca
     4621 atacgctgta ctgtattgtg aatttcttct atcaaactat tattgtttgc agataaaata
     4681 tacttttgat tcataacata ctcctgtcgt gaaatgccgt ctgaaacggt ttgcctgccc
     4741 ttacggcagc agccttgccc tgaacatcgc ctccttcatt tggcgcacgg cctcgggcaa
     4801 tccgaggaaa agtgcctgcg aaatcagcga atgcccgatg ttcagttcgc ggatggcgag
     4861 gatttgggcg atgggggtaa cgttgtgtat ggtcagtccg tgtccggcgt tgacgaccaa
     4921 gcccaaatcg ctggcaaaat gcgcgccgtt ttggatgcgc tcgaactgcc tgatttgttc
     4981 ggcgtggctg cgcgcgtcgg catacgcgcc tgtgtgcagc tcgacaacgg gcgcgccgac
     5041 atcacgggcg gcttggattt gcctgtcgtc ggcatcgata aacaaggaca cgcgtatgcc
     5101 cgcgtcggtc aggattttgg tgaattcggc aattttgtct tgttgcgcca atacgtccaa
     5161 gccgccttcg gtcgtgattt cctgacgttt ttccggcacg atgcacacgt cttccggcat
     5221 cactttaagc gcgttttcga gcatttcttc cgtcaacgcc atttcaaggt tcaggcgcgt
     5281 gcggatggcg tttttgacag caaacacgtc cgcgtctttg atgtggcggc ggtcttcgcg
     5341 caggtgcatg gtaatcaggt cggcaccgtg cgtttcggca accagtgccg cctccacggg
     5401 gctgggataa gtcgtgccgc gcgcattgcg gacggtagcg atgtggtcga tgttgacacc
     5461 taaaagcata atctttcctt ttatttctgc cttcagacgg catttgaagc cgtgccgtcc
     5521 gaagtcggga cggtttcccg ggcggtttct ttgcggtcaa actgccgtat ctgttccaac
     5581 acctgccgcg atttcagccc ctcgggcaac aggtggcgga taaaaagccg tgtgattttc
     5641 aatgcctgtt gcaggctttc ggcagtgcgg aaactgcctt cgcgcaaatc gatcaggctc
     5701 tgcccggggg cgacaacgcc ggcggcgtgc ggcggtacgg caaatccttt tccgacgggg
     5761 aagacggctg tttccgggcg gacaaggtat gtgccgcctg ccgcaatcgt cccgccgtcc
     5821 ccgtcgcggt tcaaatcggg ggcaacgccc aacaggttca gcagccgcca ctcgaaacgg
     5881 cgcaagtcgt cgatataagc ggctttgcag cacaccgcct ccatcacttc cgccaacgcg
     5941 tcgtataact cgggcaacgg atcttcgcgg acggtcaact tcagcatcaa ctcgttcaca
     6001 tacaatccgc tgaacaacgc cctaccctgc ggctgcggcc acccgcctat ccattcggcg
     6061 cgatgtaggg tcttcaactc ttgcgaacca taccaagacg cactcaccgg cacaaacggc
     6121 accaacacgc cgcgcaattc gctctgccgt ttgcgcgcgc ttcttgccaa aagtgccaca
     6181 cgcccgtaac ggcggctgaa cgcttcgacc cgcaggctgc tttcgcgcca gggcgaggaa
     6241 gccaacagga agacgggttc gtggttgact cggtgttcgg acatcatgcc tgaaatgccg
     6301 tctgaacgct gccgccgcta caaaacggcg gtcgggtacg aaccgatgac tttgacgaac
     6361 gaagcgcgtt cgcccaagcg ttccaatgcc gtctgaatct gcgcgtcccg gcggtgtcct
     6421 tcgatgtcga tgaagaacag gtattcccac aaaacggatt tactcggacg gctctcaaac
     6481 ttggtcatgg aaatacccga ctcagtcagc ggttgcagca gcgaggcaac cgcgcctgcc
     6541 cggttgggcg cggaaacggc cagcgaagtc ttgtcgctgc cgcttgcacc ggtttcgtga
     6601 tgtcccatca ccaagaagcg cgtggtgttg ttcggttcgt cttcgatgca ctcggcaacc
     6661 atatcgagtc cgtagatttc cgccgccgtg cgtccggcga tggcggcaac cgtaccgtcg
     6721 tccgattcgg caaccagcct tgcggcttcg gcattgctgg acacggcaat ccgttcggcg
     6781 ttgggcaggt gtctgcccaa ccagtcgttg cactgcgcca acgcctgcgc gtgggaaaag
     6841 actttggcaa tgccttcggt gctgccgttg tttttacgca aaaggttgtg gtggatgcgc
     6901 aaaacgactt cgccgcacgc ctgcaacgcg gtaacggcaa gcaaatccaa cgtgcgcccg
     6961 accgagcctt cggtcgagtt ttccacgggg gcgaccagat agtctgcctg acgggtttca
     7021 acctgcttga agcagttgtc tatggtcgga cacgccatgg tgtgcgcggc gtgtccgaaa
     7081 tgcttaatcg ccgcctgctg ggtaaacgtg ccctgcggcc ccagataggc gatggtcagc
     7141 gggcgttcga cggcgaggca ctcgctcatc acttcccgaa acaggcgtgc taccgattcg
     7201 tcgggcagcg ggcctttgtt caaatcctga atgcggcgca acacggcgac ctcgcgctcc
     7261 ggacggtata ctgcgcccgt gcctttcagt tcgccgatgg cgtgggcgtg ttgcgcacgt
     7321 tcgttgagca ggcgcaggat ttcggcatcg atggtgtcga tggcgttgcg gtggggaagg
     7381 aggagttcgt cgatagtttg ggacataatt tcgcctgaac agtaatttat cgtgcattct
     7441 aacatcaaat gccatctgaa acggtttcag acggcatttg atgttaaagg tattcgctct
     7501 gttcgttttc tttccacgca cgatgtgagc agagccacag aagcgcaatg ccgcaagagg
     7561 tggacgcggt catggttacc gccatcacgg ttgccgaacc gttgtgcaag aaggtcgccg
     7621 ccatacccac gcccgcgccg attaaggact ggaacacgcc caacacggcg ttcgcgctgc
     7681 cgccctcttc tttgaaataa gacataaagc atgcctgcgt gttcgcgccg accaagccct
     7741 gcgtgccgac ggaaaacatc acgcacgcaa ccagcagcca aaacgggggc aacccgaaaa
     7801 acagcacggc ggcgagttgg gacaggttgg cggcaaattg gacgacaatc ccccatagca
     7861 ggatgctttg cggatgcacg ccggttttga gccgccacgc ggtaacgcgg ttgaaaaaca
     7921 tcatcgtgat gatgttgagt gcaaacgccc aagcgtattg atgaggcgta acacggtaaa
     7981 gctgctggta cacgaaggaa gattcggtca gaaaggcgaa catcgaaccg aagctgaatg
     8041 cctgaaaaaa cagataaccc atcgcggcac gggttttcaa tacgcgcttg aaccgccccg
     8101 ccaccagccc gaacacgtcc cgtccgattt tgccgccgac ggcaggcttg ggcaggaaat
     8161 gctgcaccaa accgagcagc accagcgaat acgccgccag aaaaacaaaa atcgcctgcc
     8221 agccgcccaa gccctgcaac aatgcgccga ccatgggtgc gaccagcggc acaaccatca
     8281 aaatgatgcc gataagggca aacatctggg cggctttgcg tccggaataa taatcgcgca
     8341 ccatcgcgcc gacgatgacc acagtcatgc ccgcaccgaa tgcctgcacg acacgcaggt
     8401 tgaggagctg ttcggcactc gaagcaaata cgatggcggc aacggcaagg caatatacaa
     8461 tcagaccggt cagggcgacg ggtttgcgcc ctttgatgtc ggacaccgaa ccgccgacca
     8521 cctgtccgaa cgccgtgccg aacataaaca aactcaggct ctgttcgatg cggtggacat
     8581 ccgcgttcag cgactgcgcc atttcgggaa tcgcgggcag gtaggcatcg atggaaaacg
     8641 gcatcagcgt aaccagcatc gccatcaaaa ccgccatcag tttttcgctc atttcaggat
     8701 aatgggcaga aggcataaat tctcgtccga ttcgcaaaca aaccgcccgg cggcggaaaa
     8761 cacaatacgc ggaaacggaa aattttaaca caccggcaca aacaggcggc aacaaaagcc
     8821 ccggcaaaac cggacgaacc ggaacgatat agtggattaa caaaaaccag tacagcgttg
     8881 ccttgcctta gctcaaagag aacgattctc taaggtgctt aagcacccag tgaatcggtt
     8941 ccgtactatc tgtactgtct gcggcttcgt cgtcttgtcc tgatttttgt taatccgcta
     9001 taaaatcccg tcattcctgc gcaggcggga atccggacat ccaacgctgc agcaatttgt
     9061 cggaaataac cgaaactcaa aaaaccggat gcccgcctgc gcgggaatga cgatgcaaag
     9121 atggtcgtta tttcggataa atatccgtct tttcgttccg gatacccgct ttcgcaggaa
     9181 tggagatgga aagatttcag cctattcggc aatcatcaaa taccgcttcc caactttatt
     9241 tttgatgcga cagccggccg gcaaccaagg tggcggcgat gacgacaaac acgcccaagg
     9301 cggacacggg cgacaggtgt tcgcccaaaa tcaaaaccgc cagcagcacg ccgacgacgg
     9361 gttcgagcga aatcaacagt cccgaaacgt tggcaggaac acggctcatc cccttgttcc
     9421 acagccaata ggcgtaccag ccgcacccca aacccaaata cagcagcgac aataccatcc
     9481 cgacgctcca gtccacggta taactttgcg ccaaagcaag cgaaaacggc aggcacatca
     9541 acgatgcggc ggcaatggaa acagatgtga atgccggtgc gccgatgcgt gcaatcagcc
     9601 tttgcgtcgg acgcatagcg gcacaaaagc ccgcgcccgc caacaacacc agcaggcagc
     9661 cgaaccagcc gacttcgccg ccctcttccg caccgcccgc catcagcagc gcgacaccgg
     9721 caaatgccgc cgcgccgcat atccagtggt aggcacgcgc tttgtcgttg aagaaaaagt
     9781 gtccgacaaa caccatcagc agtggctcga gtccgacaat gaccgatgcg ctggcggcgg
     9841 aagtgtattt caacccgaca aactgaagca gcagggtcag cacatagttg acgaacgaca
     9901 caatcagcaa cggcttccat tcctcacgcg gaatcttgcc gacatgacgg cggcaggcgg
     9961 gcagtgcagg cagcgcggca attagcaggc gcacgccgac catcaatgcg ggatcgatgc
    10021 cgccatagac atatttggcg gcaataaacg agctgctcca gataatcagg gcaaggattt
    10081 ggtaaaacat agtgagtgat aaagtcagat ggtcatacaa aagtatagcg gatgaacaaa
    10141 aatcaggaca aggcgacgaa gccgcagaca gtacagatag tacgaaaccg attcact
//
LOCUS       DBBZYD010000073        10149 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.073, whole genome shotgun sequence.
ACCESSION   DBBZYD010000073 DBBZYD010000000
VERSION     DBBZYD010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10149
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.073"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..744
                     /locus_tag="ACJJDL_001541"
     CDS             <1..744
                     /locus_tag="ACJJDL_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7574224.1"
                     /translation="KLGVKTGLSIDKNRLPYLDEYYKTTKPAGTLFEPDYEALNAYKP
                     QLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDALAQIFGKQAEADKLKA
                     EIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWLHKDIGVPAVDEAIKEG
                     SHGQPVSFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNPLVAETTAWKKGQVVYL
                     VPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            762..911
                     /locus_tag="ACJJDL_001542"
     CDS             762..911
                     /locus_tag="ACJJDL_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574225.1"
                     /translation="MPSETRMQTASCVSDGIARYGGFKQGFPLRRFGLPCLNLLRRNA
                     FPFCL"
     gene            908..1877
                     /locus_tag="ACJJDL_001543"
                     /pseudo
     CDS             908..1877
                     /locus_tag="ACJJDL_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            1867..2841
                     /locus_tag="ACJJDL_001544"
     CDS             1867..2841
                     /locus_tag="ACJJDL_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HGG7574226.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELAVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            2886..3512
                     /locus_tag="ACJJDL_001545"
     CDS             2886..3512
                     /locus_tag="ACJJDL_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HGG7574227.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAFMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGVGPAGRFARRNLLSFGAGEINGTLALRRRDTGKTVAVSLNAALQPFAPE
                     MRELMPKTVGGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3596..4354
                     /locus_tag="ACJJDL_001546"
     CDS             3596..4354
                     /locus_tag="ACJJDL_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7574228.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLACTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDFADRYLTELSGGQRQRAMIAMVFCQRTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPDDIFTAANIKTLFDMDVSVLDHQSKKLIVHHI"
     gene            complement(4413..4751)
                     /locus_tag="ACJJDL_001547"
     CDS             complement(4413..4751)
                     /locus_tag="ACJJDL_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HGG7574229.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            4846..5058
                     /locus_tag="ACJJDL_001548"
     CDS             4846..5058
                     /locus_tag="ACJJDL_001548"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574230.1"
                     /translation="MPETVIPAQAGIPISAFQQYLKVSVNPNFHIPNRTETTAFDLKT
                     YGSSCPPLYFLQLSAYPALGKNQKNR"
     gene            5215..9177
                     /gene="purL"
                     /locus_tag="ACJJDL_001549"
     CDS             5215..9177
                     /gene="purL"
                     /locus_tag="ACJJDL_001549"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HGG7574231.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGRLNDDEKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     DAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPCLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGGKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFVDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLFAGARKALG
                     "
     gene            9272..10030
                     /gene="gloB"
                     /locus_tag="ACJJDL_001550"
     CDS             9272..10030
                     /gene="gloB"
                     /locus_tag="ACJJDL_001550"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HGG7574232.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLDFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
BASE COUNT         2309 a         3051 c         2631 g         2158 t
ORIGIN      
        1 aaattgggcg tgaaaaccgg tttatccatc gataaaaacc ggctgcctta tttggacgaa
       61 tattacaaaa ccacgaaacc tgccggaact ttgttcgagc cggattacga agccttaaac
      121 gcctacaagc cgcagctcat catcatcggc agccgcgccg ccaaggcgtt tgacaaattg
      181 aacgaaatcg cgccgaccat cgaaatgacc gccgataccg ccaacctcaa agaaagtgcc
      241 aaagagcgta tcgacgcgct ggcgcaaatc ttcggcaaac aggcggaagc cgacaagctg
      301 aaggcggaaa tcgacgcgtc ttttgaagcc gcgaaaactg ccgcgcaagg caaaggcaaa
      361 ggtttggtga ttttggtcaa cggcggcaag atgtcggctt tcggcccgtc ttcacgactg
      421 ggcggctggc tgcacaaaga catcggcgtt cccgctgttg acgaagccat caaagaaggc
      481 agccacggcc agcccgtcag ctttgaatac ctgaaagaga aaaatcccga ctggctgttc
      541 gtcctcgacc gaagcgcggc catcggtgaa gagggtcagg cggcgaaaga cgtgttggat
      601 aatccgctgg ttgccgaaac aaccgcttgg aaaaaaggac aagtcgttta ccttgttcct
      661 gaaacttatt tggcggccgg tggcgcgcaa gagctgctga atgcaagcaa acaggttgcc
      721 gacgctttta acgccgcgaa ataatgaaac ggcggcattc gatgccgtct gaaacacgga
      781 tgcaaaccgc ttcctgtgtt tcagacggca ttgcccgata cggaggcttc aaacaaggct
      841 ttccgctccg acggttcgga ctgccttgtt tgaatcttct acgccgtaac gcttttccct
      901 tctgtttatg actgccaaac ctttttccct caacctgact aacctcctgc tgctggcggt
      961 gttgtttgcc gtcagcctgt cggtcggcgt tgccgatttc cgctggtcgg atgtgttttc
     1021 gctgtccgac agccagcagg ttatgttcat cagccgcctg ccgcgcacgt ttgcgattgt
     1081 gctgacgggc gcgtcgatgg cggtggcggg gatgattatg cagattctga tgcgcaaccg
     1141 ttttgtcgaa ccttctatgg cgggcgcgag ccaaagtgcg gctttgggtt tgcttctgat
     1201 gtccctgctg ctgcctgccg cgccgctgcc ggtcaaaatg tcggttgccg ccgttgccgc
     1261 gctaatcgga atgctggtgt ttatgatgct tatccgccgc ctgccgccga cggcgcaact
     1321 gatggtgccc gctggtgggg attattttcg gcggcgtggt tgaggcggtg gcgaccttta
     1381 tcgcgtatga aaacgaaatg ctgcaaatgc tcggcgtgtg gcagcagggc gatttttcga
     1441 gcgtgctgct ggggcggtac gagctgcttt ggattacggg cggtttggcg gtgtttgcct
     1501 atctgattgc cgaccggctg acgattttgg ggctgggcga gacggtcagc gtgaatttgg
     1561 gtttgaaccg gacggcggtg ttgtggtcgg ggctgattat tgtggctttg attacgtcgc
     1621 tggttatcgt tacggtcggc aatattccgt ttatcgggct ggtcgtgccg aacatcatca
     1681 gccgcctgat aggcgacagg ctgcgccaaa gcctgcctgc ggtggctttg ttgggcgcgt
     1741 ctttggtttt attgtgcgat attttgggac gcgtgattgt gtttccgttt gaaattccgg
     1801 tctcgaccgt cttcggggta ttgggtacgg cgttgttttt gtggctttta ttaaggaaac
     1861 ctgcccatgc cgtctgaaaa aaatatcggt tttatggcag gaagcagccg tccgttgtgg
     1921 gtagcttttg cattgttgct ggtttcctgc gtcctgttta tgacgctcaa cgtcaaaggc
     1981 gattgggatt ttgtactgca cctgcgtctg accaaacttg ccgcgctgct gatggtcgcc
     2041 tatgcggtcg gcgtgtccac gcaactcttc caaacgctga ccaacaatcc gattctgacc
     2101 ccttcaattt tgggtttcga ttcgctgtat gtgtttttgc agaccttgct ggtgtttacg
     2161 ttcggcggcg tgggctatgc ttccctgccg ttgacgggca aattcggctt tgaacttgcc
     2221 gttatgatgg gcggctcgct gctgctgttt tacacgctca tccgtcaggg cggacgcgat
     2281 ttgccgcgta tgattttaat cggcgtgatt ttcgggattt tgttccgcag cctgtcgtcg
     2341 ctgctttcgc gcatgatcga ccccgaagaa tttacggcgg cgcaggcgaa tatgtttgcc
     2401 ggattcaata ccgtccacag cgagcttttg ggcataggcg cgctgattct gctcgtcagc
     2461 gcggcggtcg tttggcgcga acgctaccgc ttggacgtac accttttggg gcgcgaccaa
     2521 gccgtcaatt tgggcatcag ctacacgcgc aacaccttgt ggatactgct ttggattgcc
     2581 gcattggtgg cgacggcgac cgccgtggtc ggcccggtaa gctttttcgg gcttctcgcc
     2641 gcctcgcttg ccaaccactt ttccccgtcc gtgcgccatt ccgtccgcct gccgatgacg
     2701 gtttgtgtcg gcggcatcct cctggtcggc ggacagaccg tattcgaaca cttcttgggc
     2761 atgaaggcgg tattaagcgt ggtggtcgaa tttgcgggcg gactcgtttt cctctatctc
     2821 gttttaaaac acaaaaaatg acggatgcca tctgaacggc agcccgcccc gaaaggacaa
     2881 accatatgac gcaagaacgt ttacccgaat ttttcgaccg cgccccgacg ctgaccgtac
     2941 aagacccgct tgccgcattc ctcggcgcgg ccgaaaacgg catcctcact taccgctacg
     3001 ccgatgccgt gcgcctgtgc ggacattcct gcccgaccgt cgcgggcgcg tacctgatgg
     3061 ttatcaaagg tctgaaagca ctttacggcg aagagctgcc cgaacgcggc ggcatcgaag
     3121 cctttatgca gggcgcgcgc gacgaaggca cggtcggcgt aaccgcgtcc gtcgtccaac
     3181 tccttaccgg cgccgcaccc gaaaccggct ttggcggcgt aggccctgcc ggacgctttg
     3241 cccgccgcaa cctcttgtcc tttggtgcag gcgaaatcaa cggcacactc gcgctccgcc
     3301 gccgcgatac cggcaaaacc gtcgccgtca gcctcaacgc cgccctgcaa cccttcgcac
     3361 ccgaaatgcg cgaacttatg cccaaaaccg tcggcggcag cgcaagcgca gaagaactcg
     3421 aacgcttcgg acaactctgg caggcacgcg ttaaagcatt tttgaccgaa tcggcggacg
     3481 acccgcagtt cgtcatcgtc cgcgaagtgt gagcgttcag acggcattcc gaatttcaaa
     3541 tgccgtccga acccccgcca aacaacaaca aacctacgcc cgacaagcat ccgccatgat
     3601 taccatccgc aacgtcagct accgcatcgg cacacgcccc atcctcgaca acgtcagcct
     3661 cgacatcccc gaaggcggca ttaccgccct cgtcggcccc aacggtgcgg gcaaatccac
     3721 cctgttttcc tttatggcgc ggctgcgccc gcttgaaagc ggcagcatcg cctaccgcgg
     3781 caaaaacctt gcctgcaccc ccaccgccga actcgccaaa accctgtcca tcctcaccca
     3841 agaaaacagc atcatgagcc gcatcaccgt gcgcgacctg ctcatgttcg gccgctatcc
     3901 ctaccatcaa ggcagaccga ctgccgaatg ccgccgtatc gttaacggtg caatcgaaga
     3961 attccacctg caagacttcg ccgaccgcta cctgaccgag ctttccggcg gacaacgcca
     4021 acgcgccatg attgccatgg tgttctgcca gcgcaccgac tacgttttgc tggacgaacc
     4081 gctgaacaac ctcgacatgt atcatgcccg ctccctcatg caaatcctgc gccggctgac
     4141 cgacgaacac aagcgcacca ccgtcgtcgt attacacgac atcaaccagg ccgccgccta
     4201 cgccgaccac gtcgtcgcca tgaaaaacgg ccaagtcgcc atgcagggca agcccgacga
     4261 cattttcacc gccgcaaaca tcaaaaccct gttcgatatg gatgtgtccg tcctcgacca
     4321 ccaaagcaaa aaactcatcg tccaccatat ctgaagctca aaaagaaaat gccgtctgaa
     4381 aacctttcag acggcatttc cattccaaac gctcaaaccg ccgcgtccgc acgttcgccc
     4441 gtgcggatac ggattgcctc ctcgaccggc agcacaaaaa tcttgccgtc gccgattttt
     4501 cccgaacgcg ccacctcgac aatcacgtca atcgcgcgtt ccacagcgtc atccgccaac
     4561 accagctcga ttttgacctt gggcaggaaa tcgacagcgt attccgcgcc ccggtaaatc
     4621 tccgtatgcc ccttctgcct gccgaaccct ttgacctcgc tgacggtcat acccgtaatg
     4681 ccgatttccg tcaacgcctc gcgcacgtcg tcgagtttga acggtttgac aatcgcctcg
     4741 atttttttca tcacattctc cattaattaa cgtaaacaaa cgacaaatat agcagaaacc
     4801 gccggcaaac gataaacggt actgttcgcc cggcgatgcg gcgatttgcc ggaaaccgtc
     4861 attcccgcgc aggcgggaat cccgatctct gcatttcagc aatatttaaa ggtttctgta
     4921 aatccaaact tccatattcc taaccgtacg gaaacgacgg catttgatct aaaaacatac
     4981 ggaagcagtt gcccgcccct ctacttcctg caattatccg catacccggc tttgggtaaa
     5041 aatcagaaaa acagataaaa cccttattcc ttaatatctt cagacggcac ctgtattttc
     5101 cccaactgta tgccgtctga agattgtcaa cattttaagc caaaataccc aagcaataca
     5161 gccccgttgc gcgtataatg acagattttc caaccgcatt tgagagccga atccatgtct
     5221 gtcgttttgc ccttgcgcgg cgttaccgcc ctttccgatt tccgtgtcga aaaactcttg
     5281 caaaaagccg ccgcactcgg actgcccgaa gtcaaattaa gcagcgaatt ttggtatttc
     5341 gccggcagcg agaaagcatt ggatgccgcg actgtcgaaa aactgcaagc cttgttggcg
     5401 gcgcaaagcg ttgaacaaac gccaaaagcg cgcgagggct tgcatttgtt tttggtaacg
     5461 ccccgtttgg gtacgatttc gccgtgggct tccaaggcga ccaatatcgc ggaaaactgc
     5521 ggtttggcag gcatcgaacg catcgagcgc ggcatggcgg tgtggctgga aggtcgtctg
     5581 aacgacgatg agaaacagca atgggcggcg ttgctgcacg accgcatgac cgaatccgtg
     5641 ctgcccgatt ttcagacggc atccaaatta ttccaccatc tcgaatccga aaccttttcc
     5701 accgttgatg ttttaggcgg cggtaaagag gctttggtca aagccaatac cgaaatgggt
     5761 ttggcactct ccgccgacga aatcgattat ctggttgaaa actatcaggc tttgcagcgc
     5821 aatccgtccg atgttgaatt gatgatgttc gcgcaggcaa acagcgaaca ctgccgccac
     5881 aaaatcttca acgccgattt catcctcaac ggcgaaaaac aaccgaaatc cctgttcggc
     5941 atgatacgcg acacgcacaa cgcgcatccc gaaggtacgg tcgtcgctta taaagacaat
     6001 tcgtccgtaa tcgaaggcgc gaaaatcgag cgtttctatc cggatgcggc ggaaaaccaa
     6061 ggctaccgtt tccacgagga agacacgcat atcatcatga aagtggaaac gcacaaccac
     6121 ccgaccgcca tcgcgccgtt tgcgggcgcg gcaacgggcg cgggcggcga aatccgcgac
     6181 gaaggtgcga cgggcaaagg ttcgcgtccg aaagcaggct tgaccggctt taccgtgtcc
     6241 aacctcaaca tcccctgcct caaacagccg tgggaacaag attacggcaa gccggaacat
     6301 atttcctcgc cgctggacat tatgattgaa ggccccatcg gcggcgcggc gttcaacaac
     6361 gaattcggcc gccccaacct cttgggctac ttccgcacct ttgaagaaaa atttgacggt
     6421 caggttcgcg gctaccacaa accgattatg attgccggcg gtctgggcag cattcaggcg
     6481 cagcagacgc ataaagacga aatccccgaa ggcgcattgc tgattcaact gggcggcccg
     6541 ggcatgctta tcggcttggg cggcggcgcg gcttcttcga tggataccgg cacgaacgac
     6601 gcgtctttag acttcaattc cgtacaacgc ggcaaccccg aaatcgaacg ccgcgcgcag
     6661 gaagtcatcg accgctgctg gcagctcggc ggcaaaaacc cgattatctc catccacgac
     6721 gtgggcgcgg gcggtttgtc caacgccttc cccgaactcg tcaacgatgc cggacgcggc
     6781 gcggtattca agctgcgcga agtgccgttg gaagaacacg gtttaacgcc tttgcaaatc
     6841 tggtgtaacg aatcgcaaga gcgttatgtg ttgtcgattt tggaaaaaga tttggacacc
     6901 ttccgcgcca tctgcgaacg cgaacgctgc ccgtttgccg tggtcggcac ggcgaccgac
     6961 gacggccatt tgaaagtgcg cgacgatttg ttcgccaaca accccgtcga tttgccgctg
     7021 aacgtcttgc tcggcaaacc gcccaaaacc acgcgtaccg acaaaacggt tacgccgtcc
     7081 aaaaaaccgt ttcacgccga cgatatcgac atcaccgaag ccgcctaccg cgttttgcgc
     7141 ctgcctgccg tagccgccaa aaacttcctg attaccatcg gcgaccgcag cgtcggcggc
     7201 atgacccacc gcgaccaaat ggtcggcaaa taccaaaccc ccgtagccga ctgcgccgtt
     7261 accatgatgg gcttcaatac ctatcgcggc gaagcaatgt ctatgggcga aaaaccgacc
     7321 gttgccctgt ttgacgcgcc cgcctcgggc agaatgtgcg tcggcgaagc catcaccaac
     7381 atcgcggcgg tcaacatcgg cgacatcggc aatatcaaac tctccgccaa ctggatggcg
     7441 gcgtgcggca acgaaggcga agacgaaaaa ctctaccgca ccgtcgaagc ggtttccaaa
     7501 gcctgtcagg cattggattt gagcattccc gtgggcaaag acagcctgtc gatgaaaacc
     7561 gtatggcagg atggcgaaga gaaaaaatcc gtcgtttcgc cgttaagcct gattatctcc
     7621 gcgttcgcgc cggttcaaga cgtacgcaaa accgttacgc ccgaattgaa aaacgtcgag
     7681 gacagcgtat tgctgtttgt cgatttgggc ttcggcaaag cgcgtatggg cggctctgca
     7741 ttcggtcagg tatacaacaa catgagcggc gacgcgcccg atttggacga cacaggccgt
     7801 ctgaaagcgt tttacaacgt gattcaacag cttgtcgccg aagacaaact cttggcatac
     7861 cacgaccgca gcgacggcgg cttgtttgcc gttttggtag aaatggcgtt tgcagggcgg
     7921 tgcggcttgg atatagattt aaatttattg cttgcacaaa catttattac caaccatacc
     7981 gctctgtctc aatcattgcg gactgaagag gtaaaagcgt tggctgaatg gcaagaaacc
     8041 attgcccgca cattatttaa tgaagagttg ggtgctgtta tccaagttag aaaacaagat
     8101 gttgccgata ttatcaattt attctatcaa caacagctgc atcataatgt ctttgaaatc
     8161 ggtacgttaa ctgatgagaa cacgttaatc atccgcgacg ggcaaacgca ccttatttct
     8221 gacaacctaa tcaaactgca acaaacctgg caagaaacca gccatcaaat ccaacgcctg
     8281 cgcgacaacc ctgcctgcgc cgacagcgag tttgccctga ttggcgacaa cgaccgcagc
     8341 gcattgtttg ccaacctgaa attcgacgtg aacgaagaca tcgccgcgcc gtttatcaac
     8401 agcggcgcga aacccaaaat cgccatcctg cgcgaacagg gcgtgaacgg gcaaatcgaa
     8461 atggccgccg cgttcacccg tgccggattc gatgcctacg acgtgcatat gtccgacctg
     8521 atggcaggcc gcttccgcct tgccgacttc aaaatgctgg cggcgtgcgg cggcttcagc
     8581 tacggcgacg tactcggcgc gggcgaaggc tgggcgaaat ccatcctgtt ccaccctgct
     8641 ctgcgcgacc agtttgccgc cttcttcgcc gacccggaca cgctgacatt gggcgtgtgc
     8701 aacggctgcc aaatggtcag caacctcgcc gagattatcc cgggtgcaga ggcatggccg
     8761 aagttcaaac gtaacttgag cgaacagttc gaagcgcgcc tgagtatggt tcacgtcccc
     8821 aaatccgcgt cgctgattct gaacgaaatg caaggctcca gcctgcccgt cgtcgtcagc
     8881 cacggcgaag gccgcgccga cttcgcgctt cacggcggca acatttctgc tgatttgggc
     8941 atcgcgctgc aatatgtgga cggacaaaac caggttaccc aaacctatcc gctcaaccct
     9001 aacggctcgc cgcaaggcat cgccggtgtg accaacgccg acggccgcgt gaccattatg
     9061 atgccccacc ccgaacgcgt gtaccgtgcc gcgcaaatga gctggaaacc ggaaggctgg
     9121 acggaactgt ccggctggta ccgcctcttt gccggcgcac gtaaagcctt gggctaaccg
     9181 ccctactcaa accaatgccg cctgaagaat atttcagacg gcgttccggc ataccatcct
     9241 ttaaacggta tccgtccacc gaggaacact catgaaaatc acccccgtca aagccttgac
     9301 cgacaactac atctggatga tacagcacgg caaccatgcc gtctgcgtcg acccttccga
     9361 accctcgccc gtcttggaat tcctcgtccg caaccgcctc atgcttgccc aaacatgggt
     9421 aactcacccc catcccgacc acgagggcgg tgcggcggca ctctggcgcg gctacatgga
     9481 atcgcccgtt tacggcgaat ccgacatcga agcagcaacc cacaccgtaa ccgccggcac
     9541 ccaattcacc ttcggcgacg gacaggttac cgtttgggca acacccggcc acacagaccg
     9601 ccacaccagc taccttctcg aaacttcaga cggcatacac gtcttttgcg gcgacaccct
     9661 tttttccgcc ggctgcggac gcgtgtttac cggcacaatc gaacagcttt acgacagctt
     9721 ccaacgcttc aaccgcctgc ctgaaaacac cctgttctat ccggcgcacg aatacaccgc
     9781 cgccaacctg gattttgccg cccatatcga gccggacaac gccgacattc agacggcact
     9841 gaaagcggcg gcgcatacgc ctaccctgcc cgttaccctc gcgcacgaac gccgtgtcaa
     9901 tccgtttttg cgcgtcgacc tgccgcacgt cagagaccgc gccgaggcat tgagcgggaa
     9961 aacgttaaac agcagcctcg atacctttgt cgcgctgcgt gaacttaaaa accaataccg
    10021 gacgaaataa aacaacggga aaacgcagcc attcctagga tttttattaa aatcttaaat
    10081 aaaatcatac aatcatcgcc aatagacgaa aggacaccgt tgccttataa tcaaacaaaa
    10141 acaaaatat
//
LOCUS       DBBZYD010000074        10033 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.074, whole genome shotgun sequence.
ACCESSION   DBBZYD010000074 DBBZYD010000000
VERSION     DBBZYD010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10033
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.074"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(219..1661)
                     /gene="aldA"
                     /locus_tag="ACJJDL_001551"
     CDS             complement(219..1661)
                     /gene="aldA"
                     /locus_tag="ACJJDL_001551"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HGG7574233.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRGRADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1696..1896)
                     /locus_tag="ACJJDL_001552"
     CDS             complement(1696..1896)
                     /locus_tag="ACJJDL_001552"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574234.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTDANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTAIYLGIN"
     gene            complement(1905..2294)
                     /locus_tag="ACJJDL_001553"
     CDS             complement(1905..2294)
                     /locus_tag="ACJJDL_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574235.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLVN
                     YSYLDNCLVTLTADRISVSFIREIQAA"
     gene            complement(2503..3420)
                     /locus_tag="ACJJDL_001554"
     CDS             complement(2503..3420)
                     /locus_tag="ACJJDL_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7574236.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYMEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLNFGINRSRFQIDADGGKVILISVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYACFTPILYREPVRIWNLSPNLRGLAASCLQAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFADGA
                     HQVNRLADALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3593..4393
                     /locus_tag="ACJJDL_001555"
     CDS             3593..4393
                     /locus_tag="ACJJDL_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7574237.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLSGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTQLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4441..5217
                     /gene="mlaE"
                     /locus_tag="ACJJDL_001556"
     CDS             4441..5217
                     /gene="mlaE"
                     /locus_tag="ACJJDL_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HGG7574238.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5268..5762
                     /gene="mlaD"
                     /locus_tag="ACJJDL_001557"
     CDS             5268..5762
                     /gene="mlaD"
                     /locus_tag="ACJJDL_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HGG7574239.1"
                     /translation="MKKNILEFWVGLFVLLGVAAVGFLAFRVAGGAAFGNSGKTYTVY
                     ADFSDIGGLKANAPIKSAGVLVGRVGSIELDPKSYQAKVRLDLDSKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5799..6389
                     /locus_tag="ACJJDL_001558"
     CDS             5799..6389
                     /locus_tag="ACJJDL_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HGG7574240.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKN
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDTQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGGK"
     gene            6440..6718
                     /locus_tag="ACJJDL_001559"
     CDS             6440..6718
                     /locus_tag="ACJJDL_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HGG7574241.1"
                     /translation="MHTELKNGILHIGGDITVKTLTAAAFTRFRQQCRLKDTCAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6715..7542
                     /locus_tag="ACJJDL_001560"
     CDS             6715..7542
                     /locus_tag="ACJJDL_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HGG7574242.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7667..8029
                     /locus_tag="ACJJDL_001561"
     CDS             7667..8029
                     /locus_tag="ACJJDL_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HGG7574243.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            8029..8412
                     /locus_tag="ACJJDL_001562"
     CDS             8029..8412
                     /locus_tag="ACJJDL_001562"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG7574244.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            8409..8897
                     /locus_tag="ACJJDL_001563"
     CDS             8409..8897
                     /locus_tag="ACJJDL_001563"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HGG7574245.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8980..9108)
                     /locus_tag="ACJJDL_001564"
     CDS             complement(8980..9108)
                     /locus_tag="ACJJDL_001564"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HGG7574246.1"
                     /translation="MAGVTVGRGSVVGAGAVVTKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(9114..9494)
                     /locus_tag="ACJJDL_001565"
     CDS             complement(9114..9494)
                     /locus_tag="ACJJDL_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HGG7574247.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
     gene            9732..9947
                     /gene="rpmE"
                     /locus_tag="ACJJDL_001566"
     CDS             9732..9947
                     /gene="rpmE"
                     /locus_tag="ACJJDL_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HGG7574248.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT         2381 a         2773 c         2470 g         2409 t
ORIGIN      
        1 cttagctcaa agagaacgat tctctaaggt gctgaagcac cgagtgaatc ggttccgtac
       61 tatctgtact gtctgcggct tcgtttaaat ttaatccgct atacaaagac aaaaacatcg
      121 acctcggtca tgactgattg ccgatgaagc aataaaaatg ccgtctgaac ctgaaaacgg
      181 gttcagacgg cattttctat cggggtttta aagcggcatt aaatgtcggt ttccaaataa
      241 acgacttggg tttgcagata ttcttccaaa ccgtgtttgc cgtccgcgcc gccgataccg
      301 gattttttcc aaccggcgtg gaaaccctgc atcgcttcaa agttttcgcg gttgatgtag
      361 gtttcgccga attgcaggcg gcgggtaacg tagaaggctt cgtttaaatt agtcgtataa
      421 acagaactgg tcagaccaaa ctcgcaatcg ttagccagtg cgatgacctg gtcgagcgtg
      481 tcgaaagcgg aaacgggcag cacggggccg aaggtttctt ctttcataat gtccatactg
      541 ttgtcggtgt cggtcagcag ggtcggctcg aagaaataac cgcgtccttc ggcgcgtttg
      601 ccgccgcaaa ccaatttcgc accttgtttg actgcccgtt ccactttttc ggcaacggct
      661 ttgacggcgc gctcttcaat cagcgggccc atttccagcg cgcctgcttc ggcttcggca
      721 gggttgccgt agcgtacgcc tttcatggcg gcggtcattt tttcaatgaa tgcgtctttc
      781 agactgctgt ggacataaac gcgctcggcg cagttgcaga tttgaccagt gttgccgacg
      841 cgcgaagcca agatggattt cactgccaag tccaaatccg cgtctttcaa aacgatagca
      901 ggtgctttgc cgccgagttc cagcgagact ttggtgatgt tggcagaagc ggcttccatc
      961 acttggcggc ccgcttcaac ggagccggtc aggctgacca tatcgacttg cggatgggcg
     1021 gacaaggcat tgccgatttc cgcacccgga ccgttcacaa cgttgaacac gcctgctggc
     1081 agtccgaccg catcgacgat ttcggcgaag atgtggcagt tgatcggggt tacgctgctg
     1141 ggtttgacga cgatggtgtt gcccgttacc aaagcggggc ccattttgcg ggcaatcagg
     1201 aagaagggga agttccacgg caaaatgccg gcgattacgc ccagcggacg tttgaacaat
     1261 aaaatatttt cgcgcgggcg gtcgctttgg atgatttcgc cttcgtaacg acgcgcccat
     1321 tcggcttggt aatcgagata gtcggcggta aacatgactt ccacgcgcgc caagtctttg
     1381 gttttgccgc cttcggcaac gatggtgtcg gtcagctcgt cggcgcgtcc gcgtatgcct
     1441 tgggcgattt tgcgcaaata cgcgccgcgt tcgaccgcag gcaggcgttc ccaagccggt
     1501 tgcgccgcgc gtgccgccgc cacagctcgg tcaacgtctg cttttccgcc tttgggttcg
     1561 cgggcgatgg tttcttcggt ggatgggttc aatacgtcgc gccattcgcc gttgaaatcg
     1621 ttttcaaagc gtccgttgat gtacatggcc aattgtttca tttcgggttc tccagttttg
     1681 tagtcagatg tagtcttagt ttattcccaa ataaattgcc gtacaagttt cttttgaaat
     1741 gtttagacga gaagctacta tgtctgcata ttgttctgct aatttatatt cactcgaatg
     1801 caactgccga ttattccaat ctgcattcgc atcagtaaaa gccccagcat tgccgcctgt
     1861 ggcataacca atcgctaaac tgccaacggt atccacaaca ggtttcaggc tgcctgaatt
     1921 tctctaataa atgaaacact tattctatca gccgttaatg taaccaaaca attatcaaga
     1981 taagagtagt ttactaaata ctcatcttct tcaaattgta tattttgtag ggttagatga
     2041 ttatttttta attctgccgt tatttcatac ttgaaactat catctatttt tctaaatcca
     2101 atatttgaag ttgatttatc cagtatgtaa tcattaaaga tttcatagga taattccact
     2161 tcataaaatt gattttcaaa tattttgaat gggcagtatg atataaaaca atgtagttca
     2221 taaccattta tttcaatcaa tactgcctct tcaatggtgt tatctaactt tttgatttta
     2281 catttatata acattttatc ttgcctttag ataaattgtt ttgttttttg gattgttatt
     2341 caaagttctc caaaagtctt ttcctgattt tgtatgtatc gtggtaacac taccattttc
     2401 attggttcca acaaaaataa atttagattg acctttggaa tcagtaccca aaaactgaac
     2461 atatccagac atgcggattt cgggttttaa atcaaatgcg gcttaccggt tttctttttt
     2521 ggtttccgca ggcgtgctgc cgaaatattg cctgaatgcc tgagtaaagc tggaaacgtg
     2581 gcggtagccg cacaaatacg cggtttcgcc tatgcttttg cccccgtttt gcaacaggta
     2641 gagcgcgtgc tgcatttgtt tgtggtgcag ccactcgctt gcggtaatgc cgaaatggtc
     2701 gcgcatacgg cgttgcagcg tcctttcgct gatgttcagc gcgtctgcca gccggttgac
     2761 ttggtgtgcg ccgtcggcaa acgcggcatt tagggtgcgg ctgaagtctt cagacggcat
     2821 agcgtctgct tccgccgttt gccccgccgc cggcccgatg ccgtctgaaa ccgtgtccca
     2881 caaatccgac agcagccgca aaacgtccgc ctcgcggcgc aatgtttcgc ccaaatgccc
     2941 ctttgggacg gcttgcaggc aggatgccgc caaaccgcgc aggtttgggg acaaattcca
     3001 tattctgacc ggttcgcggt aaagtatggg tgtaaaacac gcatactccg gacgcagcag
     3061 ccattgctcc atacctttaa ttgtcatttt gaccgttttg ccgcctcgat aaagatagcg
     3121 gctaaacagg acttcttccc cgactgaaat caggatgacc ttgccgccgt ccgcatcgat
     3181 ttggaatcgg ctccggttga tgccgaagtt caaagagcct tccagcaaaa gcacgaacga
     3241 cacataaggt tcggcgaggc ggctgctgca aaaatcgcac cgtgccgtta ccgtgccgcc
     3301 gtggatggaa atgccgttgg acaaagtatc gaaacggtag ctgccctcca tatagctgcc
     3361 gccgccgctt ttgaccagat tgacgaaccg gctgctgttc aaatgttctg ctttttccat
     3421 agttttctga taaaggttat catttgaaag ataacatttt tcgccacagc aaacaatccg
     3481 ccgccgacaa cggcattttc acaacactta ccgtccgtat gccgtctgaa aattgcccgt
     3541 cttcccgata agccttaaaa tacacgccgt caaacctacc gtccgtccgt acatgagccc
     3601 atcccccttt atcgaaatga aagacgtcgc cttcgcgtat ggcgaccgcc cgattctgaa
     3661 cgacatcaat ttcagtattc cgcaaggtaa ttttgccgcc gtgatgggcg gttcgggcag
     3721 cggcaaaacc acgctgatgc gactgattac aggacagatt cgtccgcagt ccgggcaggt
     3781 tttgattgaa ggacgtgatt tgtcgggctt ttcggctgac gagttgtatg aacaccgccg
     3841 ccgtatgggc gtattgttcc aacacggcgc gctgtttacc gatttgtctg tatttgacaa
     3901 tattgctttt ccgatgcgcg aactgacgca actgccggaa gcggtgattc gagatttggt
     3961 tttgttgaaa ctgaacgcgg tcggtctgcg cggtgtagaa aacctgatgc cgtccgagtt
     4021 gtccggcggg atgtcgcgcc gcgtcgcgct tgcccgcacg attgcgctcg accccgaaat
     4081 tatgttgtac gacgaaccgt ttaccggtct cgatccgatt tccttgggcg tgattgccca
     4141 cttgatcagc cgcgtcaaca aggctttgcg ttcgaccagt attatggtca cgcacgacat
     4201 tgaaaaatct ttggaaatcg tcgatcaggt gattttcttg gcgcacggcg aaattatgtt
     4261 ctccggctcg ccgcaggaaa tgcgcgaact ggattcgcct tgggtgcgcc agtttgtcgg
     4321 cggcttggca gacggccccg tggcataccg ttatccggcg caaacgtcgt tgcagcagga
     4381 tttgctcggg taaatgagcc ggtgccgtct gaaaccgttg aactttacat atagaaattt
     4441 atgaacttta tccgttccgt cggggcgaaa accctcggcc ttattcaatc cctcggcagt
     4501 attacgctgt ttctgctgaa catcttggcg aaatccggta cggctttcgt ccgtccgcgc
     4561 ctgagcgtgc gccaagtgta tttcgccggc gtgctgtcgg tgctgattgt tgccgtttcg
     4621 gggctgttcg tcggtatggt tttgggtttg cagggttata cgcagttgtc gaaattcaaa
     4681 tccgccgata ttttgggcta tatggtcgcg gcttcgctat tgcgcgagct gggtccggta
     4741 ttggcagcga ttttgtttgc cagcagcgcg ggcggtgcga tgaccagcga aatcggtctg
     4801 atgaaaacga ccgaacagct cgaagcgatg aatgtgatgg cggtaaaccc tgtcgcccgc
     4861 gtggttgcgc cgcgcttttg ggcgggcgtg ttttccatgc cgcttttggc ttcgattttc
     4921 aacgtggcgg gcattttcgg tgcgtatttg gtcggtgtaa gctggctggg cttggacagc
     4981 ggcattttct ggtcgcaaat gcagaacaac atcacgatac attacgatgt aatcaacggt
     5041 ctgattaaat ccgccgcgtt cggcgtggcg gtaacgctga ttgccgtgca tcagggcttc
     5101 cattgcgtcc cgacttcgga aggcattttg cgcgccagca cgcgcacggt ggtttcgtcc
     5161 gccctgacga ttttggcggt cgattttata ttgaccgcgt ggatgtttac agattgacag
     5221 gccgtctgaa gacgaaacgc ggaacatcgg atattcaagg aactttaatg aaaaagaaca
     5281 tattggaatt ttgggtcgga ctgtttgtcc tgctcggcgt ggcagcggtc ggctttctcg
     5341 ctttccgcgt ggcaggcggc gcggccttcg gcaattccgg caagacttat accgtatatg
     5401 ccgatttcag cgacatcggc ggactgaagg ccaacgcgcc gatcaaatcc gcaggcgtat
     5461 tggtcggacg cgttggttcc atcgagcttg acccgaaatc ctatcaggcg aaagtccgtc
     5521 tcgatttgga cagcaaatat cagttcagta gcgacgtttc cgcacaaatc ctgacttcgg
     5581 gacttttggg cgagcagtac atcgggctgc agcagggcgg cgacacggaa aaccttgctg
     5641 ccggcgacac catctccgta accagttctg caatggttct ggaaaacctt atcggcaaat
     5701 tcatgacgag ttttgccgag aaaaatgccg acggcggcaa tgcggaaaaa gccgccgaat
     5761 aaacgtatgc catcatattc aaactaggac acttaatcat gaaaaaatcc tccctcatca
     5821 gcgcattggg catcggtatt ttgagcatcg gcatggcatt tgccgcccct gccgacgcgg
     5881 taagccaaat ccgtcaaaac gccactcaag tattgagcat cttaaaaaac ggcgatgcca
     5941 acaccgcccg ccaaaaagcc gaagcctatg cgattcccta tttcgatttc caacgtatga
     6001 ccgcattggc ggtcggcaac ccttggcgca ccgcgtccga cacgcaaaaa caagcgttgg
     6061 ccaaagaatt tcaaaccctg ctgatccgca cctattccgg cacgatgctg aaattaaaaa
     6121 acgccaacgt caacgtcaaa gacaatccca tcgtcaataa aggcggcaaa gaaatcatcg
     6181 tccgcgccga agtcggcgta cccgggcaaa aacccgtcaa catggacttc accacctacc
     6241 aaagcggcgg taaataccgt acctacaacg tcgccatcga aggcgcgagc ctggttaccg
     6301 tgtaccgcaa ccaattcggc gaaattatca aagcgaaagg cgtggacgga ctgattgccg
     6361 agttgaaagc caaaaacggc ggcaaataac cgacaaacca taccgtccga gggcggtatg
     6421 ggttttccga gcaaacgcta tgcatacaga actcaaaaac ggaatattgc acatcggcgg
     6481 cgacatcacc gtcaaaaccc tgaccgccgc cgcttttacc cgcttcagac agcaatgtcg
     6541 tctgaaagac acctgcgcgg ttgatttgag cggcgtcgga cgcgccgatt ccgcctgcgt
     6601 gtcgctgctg ctcgaagtgc tgcgcggttg caaaggcagc gtcaggctga ccggcattcc
     6661 cgaatccgtg cgcgcgctgt ccgaactgta cgaaatcaaa gactggctga aatcatgaaa
     6721 aaaaccgcct atgccttcct cctgctgatc gggttcgctt ccgcccctgc atttgccgaa
     6781 acccgccccg ccgaccctta tgaaggctac aaccgcgccg ttttcaaatt caacgaccaa
     6841 gccgaccgct acattttcgc ccctgccgcg cgcggctacc gcaaagttgc gccgaaaccc
     6901 gtccgcgccg gcgtgtccaa tttttttaac aacctgtgcg acgtggtcag cttcggtagc
     6961 aatatcttgc gcttggacat caaacgcgca agcgaagacc ttgtccgcgt cggcatcaac
     7021 accactttcg gtttgggcgg gcttatcgac atcgccggcg cgggcggcat tcccgacaat
     7081 aaaaacacct tgggcgacac gtttgcttcg tggggatgga aaaacagcaa ttatttcgtg
     7141 ttgcccgtct tagggccgtc caccgtccgc gacgcgctcg gcacgggtat tacctccgtt
     7201 tattcgccca agaatatcgt cttccgcacc cctgtcggac gctggggcac gactgccgta
     7261 tccgccgtca gtacgcgcga aggtctgctc gatttgaccg acagtctgga cgaagccgcc
     7321 atcgacaaat acagctacac gcgcgacctc tatatgaaag tccgtgcgcg gcagaccggt
     7381 gcaacacctg ccgaaggtac ggaagataac atcgacatcg acgaattggt cgaaagtgcc
     7441 gaaaccggcg cggcggaaac tgccgttcaa gaagattccg tatccgaaac acaggcagaa
     7501 gcagcagggg aagccgaaac gcaacctgga acacaacctt aaagccatgc cgtctgaaaa
     7561 tccgtgttcg gacggcattc ccttctgtcg gaacggacag tccgaaacca cagattgggc
     7621 tataatctct tttttgcgca taccgcgcga cagcaaagga aaaaccatgt acgaagtcaa
     7681 ccgcagcgta ttcgtcctca tccctttaga acctttttgg aactggctgc aaaccctgcc
     7741 gggcaaccac ctcgacggac tgactcttga agacatccaa gccgacgcca attcctacct
     7801 tgtccgcccg tgcgaaaccg ccgacgaagt atgggacgaa atcgaagccc gttttgaaga
     7861 cattttcgcc gccgaacttg ccgactggtg cgaagacgaa cgcgagtggc ctgcgctcga
     7921 tgccgacatt ttcaacgaat ggttcgacat ccagctttct accgtcatca ccgacctcga
     7981 acacgaaccg cttgcccgcg aagccttcca acccatcaac ctgaactgat gaagctgacc
     8041 gtccgcaact accatctcga cggctacggc catgtcaaca atgcgcgcta cctcgaattt
     8101 ttcgaagaag cgcgctgggc gttttttgaa gaacgcggac tgctgcacga gttggcaggc
     8161 ctcatactga ttgtcgcccg catcgacatc cgatacagcc gccccgccgt cgaaggcgac
     8221 gtattgcagt tttcatgccg cctgaaaacc cccggcacgc gccgtattgt gctgacccag
     8281 acgattacac tgccaaacgg caaaaccgcc gcagaagccg acatcaccct gatgcccgtc
     8341 cacgccgcca cacaacgcac cgtcagcctg cccgccaccc ttgcccgcgc attggaagcc
     8401 ttgtccgaat gaaaaaaata ctcaccgccg ccgtcgtcgc actgatcggc atcctccttg
     8461 ccatcgtcct catccccgac agcaaaaccg cgcccgcctt ctccctgccc gacctgcacg
     8521 gaaaaaccgt ttccaacgcc gacctgcaag gcaaagtaac cctgattaat ttttggtttc
     8581 cctcctgtcc gggttgtgtg agcgaaatgc ccaaaatcat taaaacggca aatgactata
     8641 aaaacaaaaa cttccaagtc cttgccgttg cacaacctat cgatccgata gaaagcgtcc
     8701 gccaatatgt caaagactac ggtttgccgt ttaccgtcat gtatgatgcg gacaaagctg
     8761 tcggacaggc gttcggcaca caggtttatc cgacttctgt cctcatcggc aaaaaaggcg
     8821 aaatcctcaa aacttatgtc ggcgaacccg atttcggcaa actctaccaa gaaatcgata
     8881 ccgcgctggc acaatagcga tgccgtctga agcgcaaaaa aaacagaaac gatgttcctg
     8941 ttttttcaga tcatccgccc cgacacgttc agacggcatt caaccttccg gcagattctt
     9001 tttcaccact gccggattgc ctgccgccaa agagtagggc ggaatgtctt ttgtaaccac
     9061 cgcgcctgcg cccacgaccg aaccgcgtcc gacggttacg cccgccatta caatcaccct
     9121 gtgccccggc cagacatcgt cctccaacgt aatcggacgg atttccgtgt agccctcaaa
     9181 gcgttttttg aacggtcaaa cttgtggtta tttgaataaa acagacattc cggctccatc
     9241 atcacatttt tgccgaccac cagcccacgg cagatttcac agtttgcccc gatgcccgag
     9301 ccgtcgccca aaaccgtatc cggaaacaca tacgccccgc gttcgatatt gaccccgcgt
     9361 ccgatatgcg gagaaacccg ccgcgccaaa aaaccgcgca cccgtctgcc gacgatgccg
     9421 atgccgcgca tatgtgacgg cggcaacccc gaaccggcaa aacgcagcag caggaaaaag
     9481 aattttgatc ccatcaaacc tccctcaaaa gaacttttta tagtggatta acaaaaatca
     9541 ggacaaggcg acgaagccgc agacagtaca gatagtacgg caaggcgagg caacgctgta
     9601 ctggtttttg ttaatccact atacatttta tcgaatatcc tcttgacgaa acaacagaaa
     9661 atagcgagaa tgccgagctt gtctgaagca taggtacatc ccctatgccc gcttttttga
     9721 aaggaaatca aatgaaacaa ggtattcacc cgaactacca cgaagtcaac gttacctgct
     9781 cttgcggcaa caaattcgca accaaatccg cgatggaaaa agaaaacttc aatatcgagg
     9841 tttgctccct gtgccacccg ttctataccg gcacccaaaa aatcgtcgat accaccggcc
     9901 gcgtggacaa attcaacaac aaattcggca acctgttcaa acgctgattg ccgctttgca
     9961 agaattaagc cctgccatca tttcgatggc agggcttttt aatatttggc acactgactt
    10021 cttatctata tag
//
LOCUS       DBBZYD010000075        10031 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.075, whole genome shotgun sequence.
ACCESSION   DBBZYD010000075 DBBZYD010000000
VERSION     DBBZYD010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10031
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.075"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(597..830)
                     /locus_tag="ACJJDL_001567"
     CDS             complement(597..830)
                     /locus_tag="ACJJDL_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HGG7574249.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(996..1196)
                     /locus_tag="ACJJDL_001568"
     CDS             complement(996..1196)
                     /locus_tag="ACJJDL_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HGG7574250.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1368..2243)
                     /gene="xerD"
                     /locus_tag="ACJJDL_001569"
     CDS             complement(1368..2243)
                     /gene="xerD"
                     /locus_tag="ACJJDL_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HGG7574251.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRT
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTCLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2295..2735)
                     /locus_tag="ACJJDL_001570"
     CDS             complement(2295..2735)
                     /locus_tag="ACJJDL_001570"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HGG7574252.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            3056..3994
                     /locus_tag="ACJJDL_001571"
     CDS             3056..3994
                     /locus_tag="ACJJDL_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HGG7574253.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            4123..4416
                     /gene="hfq"
                     /locus_tag="ACJJDL_001572"
     CDS             4123..4416
                     /gene="hfq"
                     /locus_tag="ACJJDL_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HGG7574254.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            4501..5067
                     /locus_tag="ACJJDL_001573"
     CDS             4501..5067
                     /locus_tag="ACJJDL_001573"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7574255.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLRYGFTNRKNNPPYLLAFEKLRQK"
     gene            5121..5495
                     /locus_tag="ACJJDL_001574"
     CDS             5121..5495
                     /locus_tag="ACJJDL_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HGG7574256.1"
                     /translation="MQYLIVKYSHQIFVTVTILLFNIRFFLLWKNPEKPLAGLWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSVKFYAV
                     YLLAICCVACIVYLAKTKVLPF"
     gene            5505..5999
                     /gene="folK"
                     /locus_tag="ACJJDL_001575"
     CDS             5505..5999
                     /gene="folK"
                     /locus_tag="ACJJDL_001575"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HGG7574257.1"
                     /translation="MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTDMDGISLLSLLNRIEADFGRERSFRNAPRTLDLDII
                     DFDGLSSDDPRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKQLGNQGIRL
                     LPDK"
     gene            complement(6126..6605)
                     /locus_tag="ACJJDL_001576"
     CDS             complement(6126..6605)
                     /locus_tag="ACJJDL_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HGG7574258.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYISLSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAMLQI"
     gene            complement(6825..7562)
                     /gene="ubiE"
                     /locus_tag="ACJJDL_001577"
     CDS             complement(6825..7562)
                     /gene="ubiE"
                     /locus_tag="ACJJDL_001577"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HGG7574259.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7605..7973)
                     /locus_tag="ACJJDL_001578"
     CDS             complement(7605..7973)
                     /locus_tag="ACJJDL_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HGG7574260.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            8093..9712
                     /gene="mnmC"
                     /locus_tag="ACJJDL_001579"
     CDS             8093..9712
                     /gene="mnmC"
                     /locus_tag="ACJJDL_001579"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HGG7574261.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITPAEAEKIAGIPLNTPYAEPLCGLFWQYGVW
                     LNPPAFVRTLLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSPR
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALSESLFAANPNPQKHQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAIAAQILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(9826..9943)
                     /locus_tag="ACJJDL_001580"
                     /pseudo
     CDS             complement(9826..9943)
                     /locus_tag="ACJJDL_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
BASE COUNT         2683 a         3050 c         2014 g         2284 t
ORIGIN      
        1 tgctcgccag cctactaatg aaaaactgaa ataacaaggg gtggcaaatt accgcgcccc
       61 tttcgccaac ctttcttcga gccattttac tacaatggtt ttaaaaatca aggattgcct
      121 gatgccgccc gcccctctgt ttcctccgtc aagcaccgcc ttggcggttt tcttatatag
      181 tggattaaca aaaaccagta ctgcgttgcc tcgccttgcc gtactatttg tactgtctgc
      241 ggcttcgtcg ccttgtcctg atttttgtta atccactata aaatctaccg attacacaaa
      301 cacatatcat ctttacacaa tcatgcttcc atcaacagta aaacatgata tgattgccaa
      361 caataacatc tcacaataaa ttttctaatt tttattgaaa aaatcaataa ataagaattc
      421 tcccaaccga caaataaaat aaagaaaggg ttaatatgca acatcgaaga agactagcaa
      481 tttaccaagc atccaaacgt gcttccttta ccggcaggtc atcagccccg caaaaacgta
      541 aagaacgtta atttgaaaaa aatgccgtct gaagtcctgc ttcagacggc atttttttac
      601 cgttcgagaa actgtttcaa cctgtcctca tccaaaaacc agtggcagat ttcctcatct
      661 cccgccaaca aaacgggaac cagctcattg tatttttctt ccaaaacagg attttcatcc
      721 acatcgacca cttccagccc gaacccgtat tcattttgaa aaggtttgag tgcatcgcgc
      781 attttgtggc acaagctgca atattcacga aacatcaagg tcaatttcat ccgcgtttcc
      841 ttatctgtca atttgcacac gccaaagcct tagacgcagc agaatcatgg tctatttggg
      901 aaaaaacaat gttttcaagg aagatgatac tcaagtcctg ccaaaaacag caaaaatgcc
      961 gtctgaacag ttcagacggc atttccaaaa ccgttttacg cttgaacatt gatacccgcc
     1021 gtaaccgtcg gttgcgcatt gtgcgccgtc agaaacgaag cggcaagctc cccacagcag
     1081 ccgcagcagc tcgctacgcc caattgcgac tgcaaatcgc ccattgtggt cgcgccggcg
     1141 gcgatggttt ccttgatttg atggtcggta acggcattgc agatgcagac aaacattttg
     1201 tgctccgtgt gttctcaaac tatcgtaccg atagcggctt ttattatcgt atgcgaatat
     1261 aaataaaaac ggttcgcatt gcaaggtcgg tatacacggt ttgtcttggt aattttttat
     1321 caagtttgca ttttcgattg atttcttatt aaaccaaagt agaagcctca gtttcgggaa
     1381 tggtgttcct tcactacacc ctgcaaccat acgttggcaa catgggtata aatctgcgtc
     1441 gtattcaaat cggcatgtcc caacatatcc tgaaccacgc gcaaatccaa gccgtgccgc
     1501 accagatgcg tggcaaaggc gtggcgcagg ctgtgcgggc tgatgtgccc gatgcctgcc
     1561 tgacttgcat attctttgac aatcatccat gccaactgac gggaaatgcc cgtctttttc
     1621 tgactgacaa acaatgcgtc gcaattcctg cctttcagca gaagtgggcg tgcctccgta
     1681 taatagcgtt ccacccaata cgccgactcc tgccccatcg ggaccatcct ctgcttatca
     1741 ccctttccca gcgcggtaat acagcccctg tccaaatcca cattgccgaa gttcagcccg
     1801 accgcctcgc tgacgcgcaa gccggtcgcg tacatcaatt cgagcaaagc cttatcccgc
     1861 aaaccgtgcg gcgtgtcggt atccggggcg gcaagcagtc gggaaatctg ctgctcggtg
     1921 atcagggtcg gaatattctt gtcgattttg ggcggtttca gcaggcaggt gggattgtcc
     1981 gtccttatgc cttcacgctc catccatata tacaggcgtt tgcacgccga taatgcgcgc
     2041 gcctgcgaac tccgttgctc tccgtcaaca taaaccgccg ccgccaaatc cgcttcgtcc
     2101 gcatccttca gcgttctgcc cgattgggac aggcggcggg cgattttttc caaatcgcgc
     2161 cggtaaccgt ttaaagtatt ctgactgagc cgcctgtcca accacagcgt ttcaagcagc
     2221 ctgtcgatca aaccttcttc cataccgttc caaacaaatg ccgtctgaat cttcttcaga
     2281 cggcatggtt cacattatcg ggaaagcgtt tccaatactt cctgcgcgtg acccgccact
     2341 ttgactttcc gccattcatg ggcgatttct ccatccttat tcaagacgaa cgtactgcgc
     2401 tcgataccta acgactcttt cccgtacagt ttcttcaatt tgatgacatc aaacaggcgg
     2461 cacactgttt catccttgtc gctcaacagc tcgaaccgga aaccctgctt ggcgcaaaaa
     2521 ttctgatgcg cctttacgcc gtcgcgggaa ataccgacca cggtataacc caatgcctca
     2581 aactgttcca aacgcgcatt gaaatccaag ccttccgtcg tacagccagg cgtactgtct
     2641 ttcggataaa aatacacgac caaaggcaga tgttctgccg aatgaaaatc cgcaccgctg
     2701 ctcgaaggca gggtaaattc atatttcaca tccatagtcc tactcccgat attcccatta
     2761 ttcaaaacgg cacgcagacg caccgccgca attgccaaac caaccccgat tctaccgccc
     2821 caaaggacaa ggattcaacc gccggaaaca tccaaaccga cacacgacgg catgaaaaat
     2881 atccatgtca aaccacaaaa tatgttccga tttaaaaaca gaatgttata aaacccaatc
     2941 cccaaaacac aacaagaccg cccgcctacg ggcagtctcc tgtcagacga catactttac
     3001 agatggctgt tttttcaaca aaataacgcc aatactcaaa aatatggaat caaaaatgtc
     3061 catccatact ctgaaacgcc tgccctcatc gctgctgctc ggtctctgcc tttccctgcc
     3121 gtcagcccac ctttttgccg acaacgacat tttagggcaa tttttagaac agaacatgct
     3181 tacctcctcc gatccgatag aaatattcgc cgaaagcaca atacacccca ccaacaccca
     3241 agccattaca ggcggtctga ttctctcctc acagtctgcc ctggtcgtca acaacaaaac
     3301 cggacagata ctgtatcaga aaaacgccga caggattatg cccatcgcct ccatttccaa
     3361 actgatgagc gcgatggtcg ttttggatgc aaacttggac atgaacgaaa ccgttaccat
     3421 tacgcccgac gaaatcgacc gcatcaaagg gaccggcagc cgtcttgcca taggtacggc
     3481 acttacacgc aaagaactgc tgcacctgag cctgatgagc agcgaaaacc gcgccaccca
     3541 tgcattgggc agaacctacc ccggcggcat gggcgcattt gtcgccgcca tgaaccgcaa
     3601 agcccaaagc ctcggtatgt acggcagccg cttttacgaa ccgaccggac tcaacttcca
     3661 aaacgtttcc accgccaaag acctgagcct tatggtcaac gccgccgccc aatatccgca
     3721 aatccgcacc aactcgactt ccaactacgc ctcggtacag accaaaaacg ggcagcagaa
     3781 ctacaaaaac tccaatgccc tggtcagaga aggcatgtgg aacatcgaat tgcagaaaac
     3841 cggctacata cgcgaagcag gcaggtctat ggttgtcaaa gccaacattc aaaatcaacc
     3901 cgttaccatc gtattgctga actcgcccac atccgccaca cgcgtcaacg acgcccgcaa
     3961 aatcgaatcg tggatgctgc agcaacgctc ctgacataca aatgcccggc ggaaaaccgc
     4021 ccaaacacaa aaaaaattgg taatttttcc tattcaaggc tacaattcga cacgcacagg
     4081 gcgtctgccc gatttcacaa tcataataac ggagttaaaa atatgacagc taaaggacaa
     4141 atgttgcaag atcccttcct gaacgccctg cgtaaagagc acgttccggt ttcgatttac
     4201 ttagttaacg gtatcaaatt acaaggtcag gttgagtctt tcgatcaata cgttgttctc
     4261 ctgagaaaca cttccgtcac ccaaatggtt tacaaacacg ccatttccac catcgtaccg
     4321 gcacgctccg tcaacctaca acatgaaaac agaccccaag ccgcaccgac ttcgaccctc
     4381 gtccaagtgg aaaccgtcca gcagcctgcc gaataatccg cacgaagcat gacgtgtcat
     4441 atctttcaat accttaccgg acaacggtaa ggtattttta ttttcagaca gcatttaaaa
     4501 atgttattgc aaaacatcct tccattcgcc cattgccttt tgcggaaggc acttcccgaa
     4561 ggtggcaatg ctttggacgg caccgccggc aacggacacg acaccctttt cctcgcacaa
     4621 accgcaggca tccgggggaa agtgtgggca ttcgacatcc agccgcaagc cctgagccgc
     4681 actcgatgcc gtctgaaaga agcgagatac gagaatgtgc aactcatctt agacggacac
     4741 gaaaacctga aacaatatgt ttcagaacca ctaaatgccg ccattttcaa ctttggctgg
     4801 ctgcccggcg gagataaaag ccttaccacc catacggaaa ccagcattcc cgccctttgc
     4861 gcaaccctct ccctgctgaa agaaggcggt atgcttattg ccgtcctcta tccgggacac
     4921 gaaaacggca aacaggaggc agaagcaatc gaacaatggg caaaaaacct gcctcaagaa
     4981 cagtttgccg ttttgcgtta cggctttacc aaccggaaaa acaacccgcc ctatctgttg
     5041 gcatttgaaa agttacgtca aaaataaatg tttgcggtaa aataagccga ttccaaccct
     5101 tattttgata agagccgact atgcagtatc tgattgtcaa atacagccac caaatcttcg
     5161 ttaccgttac cattttgttg ttcaacatcc gctttttcct gctttggaaa aatcccgaaa
     5221 aacctttggc gggcttgtgg aaggcactgc cccacctcaa cgacacgatg ctgctgttta
     5281 cgggattgtg gctgatgaaa atcacccatt tctccccgtt caacgcgcct tggctcggca
     5341 caaaaatcct gcttctgctc gcctatatcg cattgggtat gatgatgatg cgcgcccgcc
     5401 cccgctcggt caaattctat gccgtttacc tgcttgccat ttgttgcgtc gcctgtatcg
     5461 tttaccttgc caaaaccaaa gtcctgccat tctgaaacac tgccatgaac aacagacatt
     5521 ttgccgtcat cgccttgggc agcaaccttg acaaccccgc acaacaaata cgcggcgcat
     5581 tggacgcgct ctcgtcccac cccgacatcc ggcttgaaca ggcttcctca ctgtatatga
     5641 ccgcgcccgt cggttacgac aatcagcccg atttcgtcaa tgccgtctgc accgtctcca
     5701 ccgatatgga cggcatctcg ctgctctctt tgctcaaccg tatcgaggcg gatttcgggc
     5761 gcgaacgcag tttccgaaac gcgccgcgca cattggattt ggacatcatc gactttgacg
     5821 gcctatccag cgacgacccc cgcctcaccc tgccgcatcc gcgcgcacac gaacgcagtt
     5881 tcgtcatacg ccctttggca gaaatcctcc ctgattttgt tttaggaaaa cacggaaaag
     5941 ttgccgaatt gtcaaaacaa ctgggcaatc aaggtatccg tcttttaccg gataagtaat
     6001 tccgcacgcg gatgccgtct gaatgccggt ttcagacggc atttttcctt tgccgccaac
     6061 acgcgtgcaa aaaaatcgcc ccttggaaaa ggggcgcaaa aggaacacaa accactacca
     6121 aaactttaaa tctgcaacat tgcctgccgc atactgtatc cgacaggata taaagccctc
     6181 actaaatcgt ttcgagaaat ccaaacttct tcatcgccga cagaaaatct gcctttctcc
     6241 ggcaccagct ccaacaaaaa cggttgaacc gccgtatgca gcctgtcctt acaccgcccc
     6301 agctttctgg acaaggcgga cagggcacgc ttatagacac tatccttgcg gtcaagttcc
     6361 cgcgcactgc cgacccagct caaacgaagg ttgcggcttt catcctcaat cagcaaaatg
     6421 cctgttttga cttcccccac ctctggctcg catgaaagcg aaatataata tttgccgtcg
     6481 atgttgacat acgccgcctc atgcacctga cagttgcagc cggaagtggc aagcagcgaa
     6541 taaacagaat cccgatgcag tttcaaaata tcaagggaaa tctgtttgaa aatactttcc
     6601 ggcatttttc cctcctttcg tctgctgcgt tgtttactgg attgactgca ttatacagac
     6661 atctcccaat cttgcaaatg ataattgttc ctatttttta aaaaatttat aaattattga
     6721 tagatatgtg aattaatttt aagatttaaa atctctttct caaaaaaaca caaaaatgcc
     6781 gtctgaaacg tgttcagacg gcattggctg cacaggcaat ccgtttaaaa tttcacgccc
     6841 ttatgcagcg caacgatccc cgcactcata ttatgatagt ccacactgtc aaatccggca
     6901 tccagcatca tttgctttaa agtttcctga tcggggtgca tacggatgga ttcggcgaga
     6961 tactggtagc tgtccgcatc tttggcaatc agtttgccca tgaccggcag cagcttgaac
     7021 gaatagaaat catacgcgcc ttcgagcggc ttgtagattt tggaaaactc caacaccagc
     7081 aacgtgccgc caggtttcaa aacacgatac atctctttca gcgcggcatc tttatgcgtc
     7141 atgttccgca agccgaacgc cacggaaact aagttgaaat aattgtcagg gaaaggcagt
     7201 ttttccgcat cggcaagcga cacgggcaaa atcatgcctt cgttcaacag acggtcgcgc
     7261 ccgacggtca gcatagagga attaatatcg gtcagccaaa cctcgccttc cttgccgacc
     7321 cgtttcgccc aaccgcgcga caaatcgccc gtaccgcccg caatgtccaa cactttatcg
     7381 ccttttttca ggtgcgccgt gttgatggtg aaatgcttcc acaccctgtg cagccctgcc
     7441 gacatgacat cattcataat gtcgtagttt ttggcgacgg agtggaacac ttccgccact
     7501 ttgccggctt tttcatcttc gttgaccgtg ctaaacccga aatgcgtttt ttgtccgccc
     7561 atattctaac cacctccctg ataccgccct acggcatccc aaacttaaca atctgattgc
     7621 ttttcaaaac gcgacgcgcc cgccgccgcc aatttgtcca aatattcctg ccacatcgca
     7681 tcgtatccgt atgccagtct gtgcagatac gcccaatcgt aaagaccgct gtcgtgcccg
     7741 tccgaaaaac tgattttcag cgcgtactgt ccgacaggct gcaaatccgt aatttgcaca
     7801 tctgccttac cggtctgcaa aacatcctgt cccacaccgt gtccgcgcac ttccgcactc
     7861 ggcgaataga cgcgtaaaaa ttcggcaggc agatttttag gttcgtcccc ataagtcaaa
     7921 accaacacgg tacggttttt caacaaacgg atttcaacag gaatattatt caaaaaacac
     7981 ctcggttcgg catacaatat ccggcaggcg caggcgtgcc ttcaaacggc gcgtatttta
     8041 acagctttat cccgataccg atattcaaac ccacacttta aacggcattg atatggacaa
     8101 tctcgtatgg gacggcgttc ccgacatccg cacactcgac caaaccatcc gcaaacacgc
     8161 acacccgctc aacctgattg tctgcctccc cgataatcag attcccgatt ttcaaaccgc
     8221 acaagatgct tcggacgcgg aatgccgtct gaagcaccgt ttggatcagg caacgcagtg
     8281 cctccagttc gacagcatca acctcatcga acacatcctg cccgatgtcc gcttctggct
     8341 ggttccccct tcacgcaccc gccgcctgca cgaacacttc caccacattt cctggcagac
     8401 cgaagccatc ccgcaaaccg aaagcaaacc cgacaaaccc tggtttgcac ttccacaaac
     8461 atccgaacgg caaaaaccgg aacacatcct cgttatcggc gcgggcatat ccggcgcggc
     8521 aaccgcccac gccttagcat cacacggcat ttccgttacc gtattggaag cccgaaaagc
     8581 cgcccaagcc gccagcggca accgccaagg gctgctctac gccaaaatct cgccgcacga
     8641 caccgaacaa accgaactgc tgcttgccgg ctacggctac accaaacgcc tgctcggaca
     8701 catcctgccc gaatccgaaa cctggggcgg caacggcatc atccacctca attacagccg
     8761 caccgaacaa caacgcaatc acgaattggg tttgcaaaaa caccataacc acctctaccg
     8821 cagcatcacg ccggcagaag ccgaaaaaat cgccggcatc ccgctgaaca cgccctacgc
     8881 cgaaccatta tgcggactgt tttggcagta cggcgtatgg ctcaatccac ccgcattcgt
     8941 ccgcaccctc ctcaaccatc cgctcattgg actacacgaa gacacaccgt taaccgacat
     9001 ttcccacgac ggggaaaagt ggattgcaag cacgccaaac ggcatatttt ccgccacaca
     9061 catcatctac tgcaccggcg cgcacagccc tcgcctgccc gaaaccaacc tcgccgccct
     9121 gcctctcagg caaatacgcg gacaaaccgg cctcacaccg tccaccccgt tttccgaaca
     9181 actgcgttgc gccgtttcag gcgaaagcta catcagcccg tcgtggcacg gactgcactg
     9241 ctacggcgcg agttttattc ccaacagcag ccataccgga tggaacgaag ccgaagaagc
     9301 ctcaaaccgc caagcattgg cacaccttaa ccccgccctt tccgaatcat tgtttgccgc
     9361 caacccaaac ccccaaaaac accaagggca cgccgccata cgctgcgaca gccccgacca
     9421 ccttccccta gtcggcgcac tcggcgacat tgccgccatg cggcagacct acaccaaact
     9481 cgcgctggac aaaaactacc gcatcgacac cccatgccca tacctgccta atgcctacgt
     9541 caacaccgcg cacggcaccc gcggactcgc caccgccccc atctgcgccg ccgccattgc
     9601 agcccaaatc ctaggcttgc cccatccctt ttcacaacgc ctgcgccacg ccctacaccc
     9661 caaccgcacc atcatccgcg ccatcgtcag aaggaaggat ctaacccctt aagcctttgc
     9721 cgcatgccgt cccgaccaca gaaaatcata ttcaaataaa cataccaatc ctgacggtaa
     9781 aatatcgaaa acacccataa cgttttcttc ccaaaataag gagtaaggaa tgcctaacaa
     9841 attgcctttg ctgtccaaga tgaatgttcc gtaacattcg aagacttcct taaccctgcc
     9901 agccgtttcg gtttctgtac cccctgttag ataaggaagg aatgaaaaag ccctgttgat
     9961 tgtatgaagt aaagggcgtt aatttttgtt aatcttccct tctcaggaac tcaatatata
    10021 aggatgttaa t
//
LOCUS       DBBZYD010000076        10002 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.076, whole genome shotgun sequence.
ACCESSION   DBBZYD010000076 DBBZYD010000000
VERSION     DBBZYD010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10002
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.076"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(129..1175)
                     /gene="adhP"
                     /locus_tag="ACJJDL_001581"
     CDS             complement(129..1175)
                     /gene="adhP"
                     /locus_tag="ACJJDL_001581"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HGG7574262.1"
                     /translation="MKMQAVVVNKNVAGDVEVIEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATYCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1458..1847)
                     /locus_tag="ACJJDL_001582"
     CDS             complement(1458..1847)
                     /locus_tag="ACJJDL_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HGG7574263.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLTEVR
                     TTLLHNAQTMERYYRQKGTFKTYDKNKLKQNEYFKITLSEVSPDHFTLQAAPDPMTNE
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            2073..3251
                     /locus_tag="ACJJDL_001583"
     CDS             2073..3251
                     /locus_tag="ACJJDL_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HGG7574264.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3317..5251
                     /locus_tag="ACJJDL_001584"
     CDS             3317..5251
                     /locus_tag="ACJJDL_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HGG7574265.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDDIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5664..6446)
                     /locus_tag="ACJJDL_001585"
     CDS             complement(5664..6446)
                     /locus_tag="ACJJDL_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HGG7574266.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAKSAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6585..8774
                     /locus_tag="ACJJDL_001586"
     CDS             6585..8774
                     /locus_tag="ACJJDL_001586"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HGG7574267.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSIQTTFLDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGGMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVGNRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPIILGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRTFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNKIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8820..9893)
                     /locus_tag="ACJJDL_001587"
     CDS             complement(8820..9893)
                     /locus_tag="ACJJDL_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HGG7574268.1"
                     /translation="MRPFFVGAAVLAILGALVFFINPGAIVLHRQIFLELMLPAAYGG
                     FLTAALLDWTGFSGNLKPVATLMAALLLAASAILPFSPQTASFFVAAYWLVLLLFCAR
                     LIWLDRNTDNFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSILL
                     GAEALKECRLKDPVFIPNVVYKNIAITFLLLHAAAELWLPAQTAGFTSLAVGFILLAK
                     LRELHHHELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGSV
                     MMVWLTAGLWHSGFTKLDYPKLCRIAVPILFAAAVSRTFLMNVNPIFFITIPAILTAV
                     VFTLYLFTFVPIFRANAFTGDPE"
BASE COUNT         2325 a         2593 c         2916 g         2168 t
ORIGIN      
        1 tgacgtgttg cgatacgggt tttcagacgg tatttcaaac agaacagatt aaaatcaaat
       61 ccaaatccat aaaaaatgcc gtctgaacag cgttcagacg gcatttcgat gtgtatcgcc
      121 acgtcaaatc agtggtgatg accgcagccg cattcttttt tcatatcgat caccatacgg
      181 ccggtgattt tgccttcgcg catttcttgg aaaatggcgg gtgcttcatc caaagcacgc
      241 agttggactt tcggcacaac caaaccttcc gcgccgaatt ggaaggcttc ttccaaatct
      301 ttgcgcgtgc cgaccaaaga gccgaccact tcgatgccgt ccaaaaccaa acgcgggatg
      361 gacaaatcca tcgattccgg cggcagtccg atggcaacca cacgtccgcc cgcgcggacg
      421 caattcacgg cagagttgaa tgcggcagca gatacggcgg ttacgaccgc agcgtgtgcg
      481 ccgcctgttt tttcctgaat cactttggca gcgtcctctt tggcggcgtt gacaaccaaa
      541 tccgcgccgg tttctttggc aaacgccagt ttgtcgtcgt tgatgtcgat ggcgacaacg
      601 tgcgcgccga atactttttt cgcgtattgg acccccaagt tgcccaaacc gcccgcgccg
      661 tagatggcaa tccactgtcc cggacgaaca ctggaaactt taatggcttt ataagtggtc
      721 acgccggcac aagtaatgct ggaagcttgc gcaggatcca aaccttctgg gactttgacc
      781 gcgtaatcgg cactcacgat gcagtaggtc gccataccgc cgtcggcggt gtagcccgcg
      841 ttcaatacag agcggcacag ggtttcgcgg ccggtattgc agtattcgca cgagccgcag
      901 ctttggaaca gccaggcgat gctgacgcgg tcgccgactt tcagattttt cacaccgtcg
      961 gcaacttctt taaccaaacc gatgccctcg tgtcccagca cgcggcccgg tttttcgccg
     1021 tagtcgcctg ccgcaacgtg caggtcggtg tggcacacgc cgcaatattc gacttcgacc
     1081 aatgcctcgc cgtattccaa cgggcgaacc tcgcgttcga ttacttctac atcacccgct
     1141 acatttttat tcacaacaac tgcctgcatt ttcatgattg cgctccttag ttacggcaaa
     1201 aaaacctgta aacggaatgt tgtccgatat aagggtaagc atacgcttcc gcatctcaca
     1261 ggtcaagtgg tatgttgttg aaaaatatag attatatgtt atattataac atcttggaaa
     1321 ggcacggcat cggggcggtt gccggatgag gggcggcagg tttcaagttt gaaaaaccgg
     1381 acggcaaacc cgtaaagata ccgtctgaag ctgtgtccgg acggcatctt tacgggtttg
     1441 cgggcttcgg cggaggatta gtcgaagccg gggcaggatt ggtttgtacc ggaagcggca
     1501 atggtaccgc cgtcgttgag cgtaacgacg caggtttcgc cttcgttggt catcggatcg
     1561 ggggctgcct gaagggtgaa gtggtcgggg ctgacttcgc ttaaggtaat cttgaaatat
     1621 tcgttttgtt tcagtttgtt tttgtcgtag gttttaaacg tccctttttg gcggtagtaa
     1681 cgttccatgg tctgcgcgtt gtgcagcagg gtcgtcctga cttccgtcag gcggacgcgc
     1741 cggatgtagg ttttatagga agggtaggtg atgagcgtca ggatgccgag gatggcgacg
     1801 gcaatcatca gctcgagcag cgtaaagcct ttttgaacgt ttttcatagc aatgtgtttc
     1861 catttgtttg tcggtcggcg gcattataac gccgtatcgg aaatggcgga atatgtaaac
     1921 ggattgaaat tttcgggaaa gcagattgta taagccattt aaaacaaatg gttattttta
     1981 ttgtcggcag tttgccgcct tggatggggc agggacttgc ggtagaatcc gcttccgatt
     2041 tatgggattg acgcatacag agaattgaaa acatggcaaa aatgatgaaa tgggcggctg
     2101 ttgcggcggt cgcggcggca gcggtttggg gcggatggtc ttatctgaag cccgagccgc
     2161 aggctgctta tattacggaa acggtcaggc gcggcgacat cagccggacg gtttctgcaa
     2221 caggggagat ttcgccgtcc aacctggtat cggtcggcgc gcaggcatcg gggcagatta
     2281 agaaacttta tgtcaaactc gggcaacagg ttaaaaaggg cgatttgatt gcggaaatca
     2341 attcgacctc gcagaccaat acgctcaata cggaaaaatc caagttggaa acgtatcagg
     2401 cgaagctggt gtcggcacag attgcattgg gcagtgcgga gaagaaatat aagcgtcagg
     2461 cggcgttgtg gaaggatgat gcgacttcca aagaggattt ggaaagcgcg caggatgcgt
     2521 ttgccgccgc caaagccaat gttgccgagc tgaaggctct aatcagacag agcaaaattt
     2581 ccatcaatac cgccgagtcg gaattgggct acacgcgcat taccgcaacg atggacggca
     2641 cggtggtggc gattctcgtg gaagaggggc agactgtgaa cgcggcgcag tctacgccga
     2701 cgattgtcca attggcgaat ctggatatga tgttgaacaa aatgcagatt gccgagggcg
     2761 atattaccaa ggtgaaggcg gggcaggata tttcgtttac gattttgtcc gaaccggata
     2821 cgccgattaa ggcgaagctc gacagcgtcg accccgggct gaccacgatg tcgtcgggcg
     2881 gttacaacag cagtacggat acggcttcca atgcggtcta ctattatgcc cgttcgtttg
     2941 tgccgaatcc ggacggcaaa ctcgccacgg ggatgacgac gcagaatacg gttgaaatcg
     3001 acggcgtgaa aaatgtgctg attattccgt cgctgaccgt gaaaaatcgc ggcggcaagg
     3061 cgtttgtgcg cgtgttgggt gcggacggca aggcggcgga acgcgaaatc cggaccggta
     3121 tgagagacag tatgaatacc gaagtaaaaa gcgggttgaa agagggggac aaagtggtca
     3181 tctccgaaat aaccgccgcc gagcagcagg aaagcggcga acgcgcccta ggcggcccgc
     3241 cgcgccgata aacgaatatg ccgtctgaac acggaaacgg tttcagacgg catttgttat
     3301 tgatttacgg aatattatga gcttgatcga atgtaaaaac atcaaccgct atttcggcag
     3361 cggcgagaac cgcgtccata ttttgaaaga catcagcctg tcgatagaga agggcgattt
     3421 tgtcgccatc atcgggcagt ccggttcggg caagtccacg ctgatgaaca tactcggctg
     3481 tttggatacc gccggttccg gttcgtaccg aatcgacgac atcgaaactg ccaaaatgca
     3541 gcctgacgag ctggcggcat tgcgccgcga acgcttcggt ttcatcttcc aacgctacaa
     3601 cctcttaagc tcgctgaccg caagggacaa cgtcgcgctg ccagccgtct atatgggcgc
     3661 gggcggcaaa gagcgttccg cgcgtgcgga gaagttgttg caggatttgg gtttggcaag
     3721 caaagagggc aacaagcccg gcgaactctc gggcggacag cagcagcgcg tctccatcgc
     3781 ccgcgccctg atgaacggcg gagaaatcat cttcgccgac gagccgaccg gcgcactcga
     3841 taccgccagc ggcaaaaacg tgatggaaat catccacaag ctgcacgaag ccgggcatac
     3901 tgtcattatg gtcacgcacg accccggcat cgccgccaat gccaaccgcg tcatcgaaat
     3961 ccgggacggc gaaatcattt ccgacacctc gaaaaatccc gaaatccccg caagcaatgt
     4021 cgggaggatt cgggaaaaag cctcgtggtc gttttattac gaccagtttg tcgaagcctt
     4081 cagaatgtcg gtgcaagcag tattggcgca caaaatgcgt tcgcttctga cgatgctcgg
     4141 catcatcatc ggcatcgcgt cggtggtttc cgtcgtcgca ttgggcaacg gttcgcagaa
     4201 aaaaatcctt gaagacatca gttcgatagg gacgaacacc atcagcatct tcccggggcg
     4261 cggcttcggc gacaggcgca gcggcaggat taaaaccctg accatagacg acgcaaaaat
     4321 catcgccaaa caaagctacg ttgcttccgc cacgcccatg acttcgagcg gcggcacgct
     4381 gacttaccgc aataccgacc tgaccgcttc tttgtacggc gtgggcgaac aatatttcga
     4441 cgtgcgcgga ctgaagctgg aaacggggcg gctgtttgac gaaaacgatg tgaaagaaga
     4501 cgcgcaggtc gtcgtcatcg accaaaatgt caaagacaaa ctctttgcgg actcggatcc
     4561 gttgggtaaa accattttgt tcaggaaacg ccccttgacc gtcatcggcg tgatgaaaaa
     4621 agacgaaaac gctttcggca attccgacgt gctgatgctt tggtcgccct atacgacggt
     4681 gatgcaccaa atcacaggcg agagccacac caactccatc accgtcaaaa tcaaagacaa
     4741 tgccaatacc caggttgccg aaaaagggct gaccgatctg ctcaaagcgc ggcacggcac
     4801 ggaagatttc ttcatgaaca acagcgacag catcaggcag atagtcgaaa gcaccaccgg
     4861 tacgatgaag ctgctgattt cctccatcgc cctgatttca ttggtagtcg gcggcatcgg
     4921 cgtgatgaac atcatgctgg tgtccgttac cgagcgcacc aaagaaatcg gcatacggat
     4981 ggcaatcggc gcgcggcgcg gcaatatttt gcagcagttt ttgattgagg cggtgttaat
     5041 ctgcgtcatc ggcggtttgg tcggcgtggg tttgtccgcc gccgtcagcc tcgtgttcaa
     5101 tcattttgta accgacttcc cgatggacat ttcggcggca tccgttatcg gggcggtcgc
     5161 ctgctcgacc ggaatcggca tcgcgttcgg ctttatgcct gccaataaag cagccaaact
     5221 caatccgata gacgcattgg cacaggattg aggttggaca aagatgccgc ctgaagctgc
     5281 agaaccggtc attttggagc agaaacttat tggacaaaaa cggtttctta gattctacgt
     5341 tccaaattcc cacttgcgtg ggaatgacgg cggcgggggt tcgatgattg cacacaacgc
     5401 tcgagtcccg tcattcccgt aaagacggga attcggttcg ttcggctttg cttgtttcgg
     5461 ataaatcacg gtaactcaat attccagatt cccgcccgcg tgggaacggc ggcggggctt
     5521 cgtattgttc aatttattat tttcaatcat tcaatgggtt aggatgtgtt tgttggcttg
     5581 ctaactttca gggcggattg gttttcaggc ggcatttccc gcaaaaaagg cttggaattt
     5641 tccaagcctt ttttgcggat ggattattga tttttgcgga tgatttcctc cagttggggc
     5701 atcgggctgt agccgctttg gctgcgcccg ttggggaaga cgagggtcgg cgtgccgttg
     5761 aagccgaatt gttcgcccaa ggaagtggtt tccgcgacgg gattgtcgca gatgctgccg
     5821 ccgaccggga atttgccttt acgcatccaa tccgtccacg ctttggcgcg gtcgggctga
     5881 caccataaga tttgcgcctt gcgcgcggca tcagggtgca ggccggcaat gggcatcata
     5941 aagctgtaaa ccgtcacgtc ggtcattttt tcaaactcgt gttccaagcg tttgcagaac
     6001 ggacaatcgg ggtcggagaa gacggcgact ttcagcttgc cgttgccgcg cacttctttg
     6061 atggctttgt ccaaaggcag ggaggcgaag tcgattttgt tcaaatcggc ggcgcgttct
     6121 tcggtcaggt ttttgcgcgt gtcgatgttg atgagttcgc cgacgaacat atagccgcct
     6181 tcggcatcgg tgtagataat ctgcctgccg ctgacgacga cttcgtaaat gcctttgacc
     6241 ggtgtttcgc tgacgctcaa cactttcaaa tcttgggcgg aataggtttt ttccaaacgc
     6301 gctttcaaag aggcggcaac ggatttgccg gcggacttgg ctttgacggc gggttcggcg
     6361 ttggcattgg aaacgggcgt ttgcccgcaa gccagcagcg ggaggacggt aaagggggtc
     6421 aagattttga ttaacttggt tttcatataa agatgattgc gcgtgttgga aaagcggaat
     6481 tgtatcaaat ctctgttgcg cctgcattgc gcctaggctc aatttatcgt ctgaaaatag
     6541 cttccgcctg ttaaaatacg caaaaaaatg atttgcctgc ctgtatgatc taccaccgca
     6601 tcgccgtaaa cgtgccgctt tcagacggcc ttttgactta ttcccattcc gatccgcttc
     6661 ctccgggaac gcgggtgctt gtgcctttcc gcaataaaac cgtggtcggg atggtgtggg
     6721 aaacggatat tgcgccggat atggatacgg cgcggatttt gagtattcag acgacctttt
     6781 tagacgagcc gccgttgcct gaaagctggc gtgatttgct ctcgtttacg tcgcgttatt
     6841 accactatcc gacggggcag gcggtgtttg ccgcgctgcc gcagggtttg aaggaaacgc
     6901 gcgcggtgga aatgccgcag ccgccgttgt tttatgcgtt gaacgaagcg ggcagggcgc
     6961 aaacgccgcc gccggcgcgg ttcaacaaaa aagcggcttt gtgggacgcg ctgctgtcgg
     7021 gcgggatgac gatggcggcg ttgaagcagg tgaacgcgca ggcggcgaaa ttaatcgaag
     7081 attgggcgga gcagggctgg attgaaacga cggaagcggc gaagcccgtt ttaaggtcgt
     7141 gtaatgggca ggcttcgcac tctgaatttg tattaaatgc tgaccagcag aaggcttccg
     7201 atgccattca gacggcattg ggacgcttcc agccgtttct gctgtacggc atcaccggca
     7261 gcggcaagac cgaagtgtat ttcgatgcga tggcgaaagt gttggctcag gggcggcagg
     7321 tgttgtttct gttgcccgaa atcaacctca cgccgcagct tttgaagcgg gtgggaaatc
     7381 gttttgccga cgtgccgacc gccgtgttgc acagtcagat ggcggcaggc aggcgcacgc
     7441 aggattattt gcgcgcgatg ttggggcagg cgaaattggt catcggcacg cggctggcgg
     7501 tgtttacgcc gatggatgat gtcgggctga ttgtagtcga tgaggaacac gacggctcgt
     7561 tcaaacaaga caacgaattg cgctaccacg cccgcgattt ggcggtgtgg cgggcgaagc
     7621 agggcggctg ccccatcata ttgggcagtg ccacgcccag cttggaaagc tggcacaagg
     7681 cgcaaagcgg cgcgtaccgc ctgctgcaac tgaccgaacg cgcccatacc gccgcgcaac
     7741 tgccgcaagt ggacattctc aacgtaggcc gtctgaaact cgacaacggt ttctcgccgc
     7801 aagccttgca gcttttgaaa cagaattttg aagcgggcgg tatgtcgctg gtgtacctca
     7861 accggcgcgg cttcgcaccc gcgctgtttt gcggcgactg cggccatacc ttcggctgcc
     7921 caaactgctc cgccaaaatg gtactgcacc aacgcgcccg ccaactgcgc tgtcaccact
     7981 gcgaccaccg cgaacccatc ccgtacaaat gccccgactg cggcaaccaa gacctgaccg
     8041 ccgtcggcca cggcacgcag cgcgtcgaag aaaccctgcg caccttcctg cccaaggcag
     8101 ccgtcgtccg tgttgacagg gacagcaccg cgcacaaaaa tgactgggcg gatttgtacc
     8161 gccgcatcgc cgacaacaaa atcgacattt tggtcggcac gcagatgctt gccaaaggcc
     8221 atgatttcgc gcggctcaac ctcgttatcg tattgaacgc cgacggcagc ctgtacagcg
     8281 cggactttcg cgcgccggaa aggctgtttg ccgagctgat gcaagtgtca ggcagggcgg
     8341 ggcgcgccga caaacccggc aaggtgttga tacagaccca actgcccgaa catcctgtct
     8401 tcgccgccgt caaagcgcaa gactatgccg tgtttgccga aaacgaattg aacgagcggc
     8461 aaatgttcgc catgccgccc ttcggtttcc agaccgccgt ccgcgccgat gcgccgcgcg
     8521 ttgccgatgc gatggaattt ctcaatgccg ccaaagaaac cctcgccccg ctgttgcccg
     8581 aaagcgtttc ccagttcggc gcggccccga tgctgatggt gcgcctcgcc gaacgcgaac
     8641 gcgcgcaaat cttcctcgaa tcgacatccc gacaggattt gcaccgtgcc gtgagtttgt
     8701 gggtgcaggt gttgcagcaa aaccgcgacg gcaaaatcag atggtcggtg gatgtcgatc
     8761 cgcaggaggc ttgattatcg gcaatacgat gccgtctgaa accgtttcag acggcatttt
     8821 tattccgggt cgcccgtaaa cgcattcgcc cgaaaaatcg gaacaaacgt gaaaagataa
     8881 agcgtgaaca cgacggcggt cagaatcgcg gggatggtga tgaagaatat cgggttcacg
     8941 ttcatcaaga aagtgcgcga gacggcggcg gcgaagagga tggggacggc aatgcggcag
     9001 agtttggggt agtcgagttt ggtaaagccg ctgtgccaca gtccggcggt cagccacacc
     9061 atcatcacgc tgcccatcat gccaccgagg gtaatcaggt gcaggggcgc ggaggcgggc
     9121 aggttttgta atttcgccgc gcctgtccac aaatagcctg cggcggcaaa gagttggagc
     9181 aggtaataag tgcggacgta gtgtttgcgc aggagttcgt gatggtgaag ctcacgcagc
     9241 ttggcaagca ggataaagcc gacggcgagc gaggtaaaac cggcggtttg cgcaggcagc
     9301 caaagttcgg cggcggcgtg caggagcagg aaggtaatgg cgatgttttt atagacgaca
     9361 ttggggatga atactgggtc tttcagacgg cattctttca gggcttccgc gcccaaaaga
     9421 atactgacgc gcacggatac gaacatcacc gccgccatat ttagatgcac ttgcgcgcgc
     9481 aacaggttca aatcgccgct gacggcatat gccgtctgaa aaacagtgaa cgcggcaagt
     9541 aacattagca gggcgaagtt gtcggtgttt cggtctagcc aaatcagccg ggcgcagaac
     9601 agcagcaaca ccagccaata ggcggcgacg aaaaacgagg cagtttgcgg cgaaaagggc
     9661 agtatagcgg atgcggcgag caataatgcc gccatcaaag tcgcgacagg tttcaggtta
     9721 cccgaaaaac ccgtccagtc caacaaagcc gcagtcaaaa aaccgccgta tgccgccggc
     9781 agcataagtt ccaagaaaat ttggcggtgc aggacgatgg caccggggtt gatgaaaaac
     9841 accagcgcac cgagtatggc aagcaccgcc gcgccgacga aaaacggccg catagcaact
     9901 gtatttttca ccccgtcggg caaaaatacc aaaactcaaa tcaagccgtc cggataccgt
     9961 tttcggcggt atcgttttcg gcaaaataat cacgcatccg gg
//
LOCUS       DBBZYD010000077         9793 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.077, whole genome shotgun sequence.
ACCESSION   DBBZYD010000077 DBBZYD010000000
VERSION     DBBZYD010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.077"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(12..1307)
                     /locus_tag="ACJJDL_001588"
     CDS             complement(12..1307)
                     /locus_tag="ACJJDL_001588"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HGG7574269.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGVAGAAAEAGAQIFEQSPMTRIEP
                     HQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFQPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     DDVKIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1433..2320)
                     /locus_tag="ACJJDL_001589"
     CDS             complement(1433..2320)
                     /locus_tag="ACJJDL_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HGG7574270.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(2320..3285)
                     /locus_tag="ACJJDL_001590"
     CDS             complement(2320..3285)
                     /locus_tag="ACJJDL_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HGG7574271.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWSTLNPFGDGENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3301..4425)
                     /gene="potA"
                     /locus_tag="ACJJDL_001591"
     CDS             complement(3301..4425)
                     /gene="potA"
                     /locus_tag="ACJJDL_001591"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HGG7574272.1"
                     /translation="MTATTASSTKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLSNG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4802..5071)
                     /gene="rpsO"
                     /locus_tag="ACJJDL_001592"
     CDS             complement(4802..5071)
                     /gene="rpsO"
                     /locus_tag="ACJJDL_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HGG7574273.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5294..6229)
                     /gene="secF"
                     /locus_tag="ACJJDL_001593"
     CDS             complement(5294..6229)
                     /gene="secF"
                     /locus_tag="ACJJDL_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HGG7574274.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGTALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6233..8086)
                     /gene="secD"
                     /locus_tag="ACJJDL_001594"
     CDS             complement(6233..8086)
                     /gene="secD"
                     /locus_tag="ACJJDL_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HGG7574275.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGSVWKPKAEMAGGKE"
     gene            complement(8298..8564)
                     /gene="yajC"
                     /locus_tag="ACJJDL_001595"
     CDS             complement(8298..8564)
                     /gene="yajC"
                     /locus_tag="ACJJDL_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HGG7574276.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            8692..>9793
                     /locus_tag="ACJJDL_001596"
     CDS             8692..>9793
                     /locus_tag="ACJJDL_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HGG7574277.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKISRL
                     DNDTAISTGSLSAARFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAVAEYRLNRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRAFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2495 a         2607 c         2438 g         2253 t
ORIGIN      
        1 gcctgcgacg cttaacggct gtctttccac tgataatatt tcgagccgag gaaagaaccg
       61 agtttgcgca aaaacggttg caggataata ttcggctggc gcaaccgctc aaacggcttc
      121 agacggcatt cgtcccctaa aattgcttcg gcaaccgcca gacctgcaat gcctgttatc
      181 gccatcccgt gtccggaata accttgtgca taaaaaacat ttgcggccaa acgtccgaaa
      241 tgcgggacaa ggttggcggt aatgtcgcac tccccgcccc acgaatattc gattttgaca
      301 tcgtcaagct gcggaaaaac tttaagcata tcttggcgga caagctcggt catacgcgca
      361 ggattgtcga taaactcgtt atccttaccg ccgaaaagca gtctgccgtc cgcgctgagg
      421 cggtaataat ccaaaatatg gcggttgtcg catactgcca tattgttacg gataagccct
      481 tttgcgcgcg cccccaaggg ttcggtcgca ataataaagg tgctaacggc aatcgccttg
      541 cgttccaaag gctggaatat cgggttcaaa cctgcatagg tattgacggc atacaccaga
      601 tttttgcatt cgacgctgcc ttcgggcgtg taaaccagcc aaccgttttg atgcggttcg
      661 atgcgcgtca tcggggactg ctcgaaaatc tgcgcgccgg cttcggcagc ggcaccggca
      721 acacccaacg tgtaattgag cggatgcagg tgtccggata aggggtcgaa ttgtgcccct
      781 tggtacatat cgctgtcaag ctgctgtttc aactcggctt tatcccaaag ttgataatga
      841 ctcgcaccgt aatgccgttg ggcgtgttca tgccactgct gcaactcttc ccaatgctgc
      901 ggacggacgg caaccgtggc ataaccgcgc tgccaatcgc aatcaatggc atgtttgcgg
      961 acgcgttcgt ccaccagttc gaccgcctgc aaagactgtt gccaaaacca ttgcgcctgc
     1021 tccaagccga cctgtttttc aatttccccc ataccgcagg cgtaatcgct gataacctgc
     1081 ccgccactcc gtcccgacgc gccgaaaccg atacgcgcgg cttccaacac aaccgtttca
     1141 tgtccctgct ccgccaaggg caatgcagtg cacaaaccac tcaatccgcc gccgatgata
     1201 caggtatcgg ttttcagacg gcattgaagt ttcggataaa cagtatgagg attaaccgaa
     1261 ctgaaataat aagaaggcag atattcttga aaatcagggc gaatcattgt gtttgcttta
     1321 tcaggtgtat tttcggacgg aatgatacag gctgtcgggc catatcgtcc aaacagaaaa
     1381 tcggttgaag aaaacaggct gacccagtca tgcggtcagc ctgccttatt aattaatttg
     1441 ctttctcggc agccaatttt tcttggcggt aggcttctgc cgcttctcgg tcacgcttgg
     1501 ttgcctgcct catcatccaa taattgacga tgatgaccaa tgttccgatg atgccgatta
     1561 ggatggtcgc caagacattc atctgcggat cgagacccaa cttgattttg gagaaaatca
     1621 cctgcggcaa tgtggatgaa ccggggccgg agaggaatga ggtaatcacc aaatcatcca
     1681 aagacagggt aatgccgagc agaaagcctg aagcgatggc aggggcaatc aaaggcaaag
     1741 tgatgacaaa aaagattttc agcggacgcg cgcccaaatc cattgcggct tcttcgagcg
     1801 actggtcaag ctcaaccaga cgcgaacgga taacaacggt aatgtacgcc atacacagcg
     1861 tcgtatgtcc gaggaagatg gtgaaaaagc cacgatcgaa gtagagatgt tgtaaccatt
     1921 cgctgccctg caaaaatatc tgtacctgaa taatcagcag cagcatagac agaccggtaa
     1981 tcacgtcggg catcaccata ggtgcggaaa tcataccggc gaacaaggta ctgccgcgaa
     2041 aacgtttaat ccgcgccatc gcatagcctg ccagcgtgcc caaaacgacg gcagcaagcg
     2101 aagacacaac ggcaatccgc agcgacagcc aagcggcttc caagatggtg tcgttttcca
     2161 gcaatgcgcc gtaccacttg gtcgaaaagc cgccccaaac ggttaccagc ttggattcgt
     2221 taaacgaata gatgaccaaa acaaccagcg ggatatacag aaacgccagc gacagtgcca
     2281 acatcagttt caagaaccaa gataatttgg atttctgcat tatttggctc cttcttccaa
     2341 ttcgcggttt tcataatgct gaaacagggc aatcggcacg accagcagcg cgaccatcac
     2401 gacggcgacg gcggaagcca gcggccagtt gttttgatcg aagaacgcct gccacaagac
     2461 tttaccaatc atcaggtttt ccgaaccgcc gaccagctcg ggaatgacga actcgccgac
     2521 agcagggacg aaaaccagca tggagcctgc aataatgccg gttttcgaca aaggcagggt
     2581 aatcgtcaag aacgatttga ccggccccgc gcccaaatcg gaagccgctt caagcaggcg
     2641 gttgtcgagt ttcaccagtt gcgtgtatag cggcagaatc ataaacggca gataggcgta
     2701 aaccatcacc aaattgagcg aaaaggcatt gtagaacaaa tccaaaggct cgctgataat
     2761 acccatttta atcaacaggt tgtttacaat gccgttatgc ccgagcagac ccatccacgc
     2821 atagacgcgc aacaggaacg atgtccaaaa gggcagcata atggcaagca gcaaaccatt
     2881 gcggacagaa ggattggcac gagaaatcgc ataggcggtc ggataaccga ccaacagaca
     2941 aattaccgtc gtagtcagcg cagtcttaat tgaagaccaa taagtcatca gatagatatt
     3001 gctgttttca ccgtcgccga acggattgag cgtactccaa aaattttgga agatgtctgc
     3061 ataattttgg tagctgacag caatattcag acgacccaaa tcctcatcta tcgtcgttaa
     3121 aggagtaaac ggcgggatgg cgatttcttg ttcggcaaag ctgattttca gcacgatggc
     3181 gaacggaatc agaaacagca ccaaaagcca aatatacggt acggcaatca ccgcacgctg
     3241 ccccggacgg cggaacagtt tgtttttcag tttattaagg ttcattgcat tccccttaaa
     3301 tcaacggaac agtggcgtag gctggttttc cggccagctg atatagacgg tttcgtccca
     3361 agttggcggt gtaatgttgc gcacatacca gtaaggggcg gggacttggc tcttgacgac
     3421 gcgcccgttg gagagtttga tatggtatat ggcgaagctg cccaaatagg cgatttcttt
     3481 taccgtgcct ttcgcccagt tgtagtcgcc caaatattcg ggtttttctt tatataaatc
     3541 aatatcctct ggtcgaatac taacccaaag gtcctgctcg ctcggaccac ccaaaccgtg
     3601 gtcgatgcgg acgtggtttt ccaaaccttc gcattcgata acggcatagt cggcatgatc
     3661 ttcaatcacc acaccgtcaa agatgttggt ttcgccgata aactcggcag tgaagcggct
     3721 gttgggatag tcgtacacgt cgctgggtgt gccgacttgc tgcaactgac cgtcggacat
     3781 aatggcgatg cgggtcgcca tcgtcatcgc ctcttcttgg tcgtgtgtaa ccataataca
     3841 ggttacgccg acttgttcca gcgtattgac caactcaagc tgggtttgct ggcgcagttt
     3901 tttgtccaac gcgccgaggg gctcatccag cagtagaatt ttcggacgtt ttgccagact
     3961 gcgtgccaaa gcaatgcgct gctgctgacc gccggacaat tggtgcggtt tgcgtttagc
     4021 aaatttggtc atctgaacca ggcggagcat ttcttcgacg cgcgcggcga tttcgccttt
     4081 aggcattttg tcctgtttca gaccgaaggc aatgttttgt tctacggtca tatgcggaaa
     4141 aagcgcgtaa ctttggaaca tcatattgat ggggcgatca tagggtgcaa gtttggtaat
     4201 atcctgacca tcaaggataa tttttccctg attgggactt tccatacccg ccagcatacg
     4261 cagcagcgtg gattttccgc tgccggaact gcccaaaaga gcgaaaattt cgtgttgata
     4321 aatgtccaag tcgatgttat cgacagcgta attgtcacca aactttttca ccaaaccttg
     4381 gatttgcaga taaggcttgg ttgaagacgc agtggttgcg gtcataatgg caatactcca
     4441 ataaaaagac gagtaccggc aaaacggatt ttcgaatggg tgataaaaag ctgtttgatt
     4501 gctggcggga gtcgcaacgt ctgatgccgt ctgaaactct tgtgaagcgc acgggcagca
     4561 tgaaatggaa caagattcca aagaacttta tattatatta gtttatgcgg ttttcgggca
     4621 atatagtgga ttaaatttaa accagtacag cgttgccttg ccgtactatt tgtactgtct
     4681 gcggcttcgt cgccttgtcc tgatttaaat ttaatccact ataaatatgg atttgagctt
     4741 gtcggaaagc aacagaaaag aaaacaccgc ccatttttct gggcggtgtc ggaaagcgta
     4801 attatttacg cagacccaag cgggtaatca acgcgcgata cgtatcgggc tgggtacggc
     4861 gcaagtaggc cagcaggcgg cggcgttggc tgaccatttt caacaggccg cgacggctgt
     4921 ggtggtcttt tgggttggct ttgaagtggg gggtcaggtc gttgatgcgg aaagtcaaca
     4981 gagcgacttg tacttcggaa gagccggtgt cgccttcttt gcgttggaaa tctttaacga
     5041 tttgtgcttt ttgttctacg gtcagtgcca taatgaaaac tccaaaaata taagaatccc
     5101 catagggatt cagacaagtt tgccaagcct gaagacaacg gcaaactccc tatgcccaag
     5161 ataggacaac gtggcattat gacacaattc ccgcatttct gcacaatatt ttaagaccgt
     5221 ggaagtaacc gttaaaaatg ccgtctgaag cattgtctgc ttgagacggc aatgttcaga
     5281 cggcatatgc gcttcaaacc acgatttctt ctttcttctt cggttcttta ccgatattgt
     5341 cgcggctcaa accgaacatt agcagaagcg ggctggcaac caatacggaa gaataaatgc
     5401 cgaacacgat gccgatggtc aacgccatag aaaagccgtg caaggccgta ccgccgaaca
     5461 ccagcatgga tacgaccatc gcctcggtcg aaccgtgggt aatgatggtg cggctcatcg
     5521 ttgcggtaat cgcgttgtcg atgacttccg gcacggcatg tccgcgcatc gccggcttgc
     5581 ggaagttttc acggatacgg tcgaagacga cgacggattc gttcacagaa tagcccaata
     5641 cggcaaggat acccgccaag acggtcagcg aaaattccca ttggaagaag gcaaagcagc
     5701 cgagaataat cacgatgtcg tgcatattgg cgataatggc agatacggca aaacgccatt
     5761 cgaaacgcat cgacaggtaa ataatgatgc cgataacgac aaaacctaaa gccatcaatc
     5821 cattacttac caattcctca ccaacttgcg ggccgataaa ttcgacttgg cgcaaagtaa
     5881 cgtcgggact gtcttttttc agcaaatcca taacctgatt ggacaactgt gcggaagtaa
     5941 caccttcttt gttcggcagg cggatcatga tgtgtttgtt cgtacccaat gcctgaacct
     6001 gtacatcacc tattttcagc gtatcgaggc gttcgcgcat cttattgaca tccgcaccct
     6061 gctgatattg gacttccatt accgtgccgc cggtaaattc gacagagaaa ttcagacctc
     6121 tggtaaccaa aaagaatacg gcggcaataa aggtaaccaa cgaaataaag gtcgtcagtt
     6181 tgccgtagct cataaacgga atatcgcgtt tgattttaaa gagttccata gcttactcct
     6241 tgcctcctgc catttcggct ttcggcttcc acaccgaacc gatggaaata ttctgcaatt
     6301 tgcgtctgcg tccataccac agattgacca acgcacggaa tacgacgacg gacgaataca
     6361 tcgaagtcag aatacccaaa cagtgtacga ccgcaaaacc gcgtaccggg ccggaaccga
     6421 ataccaaaag cgcgataccg gcaatcagcg aagtcaggtt ggaatcgaca atggtcgccc
     6481 atgcgtgttg gaaaccgaga ttgattgcct gctgcggcgg cacgccggca cgcaattctt
     6541 cgcggatacg ttcgttaatc aagacgttgg agtcgattgc catacccaaa gtcaacgcca
     6601 gcgcggccat acccggtaac gtcaacgttg cctgcatggc agacaaaata ccgattagga
     6661 acagtatgtt ggcactcaat gcaatggtag aaaagaaacc catcagacga tagtaaacca
     6721 ccatgaatgc agcaacgatg gcaaaacccc ataaagtcga atggaagcct ttttcgatgt
     6781 tctccttacc caaagacgga ccgatggtac gttcttcgac aatctgcatc ggcgcggcaa
     6841 gagaaccggc acgcaacagc aaagacgtat cattggcttc ggctgtcgtc atgcttccgg
     6901 aaatttccac gcgtccgccg gtaatggcag tacggataac cggcgcggtt acaacctcgg
     6961 attttccttg gtcgatcaaa accatcgcca tgcgtttgcc gacatttgcg gcagtcagtt
     7021 cgccaaaaat gctgccaccc gcgctgtcca agctcagact gacagcaggt gcgcccattt
     7081 ggtcgaaact cggttgcgca tcgttgatgt tgtcgcccgt cagctcgacc tgtttgctga
     7141 ttagcagagt ttcgggacga tctccgccgc ttgaaagcag ctcataaccg ctcggcacgt
     7201 tgccttccaa tgcctcgcgc aacttggcag gatcgtcctc caccatacgc aattccaaag
     7261 tcgcggtacg gccgatgatg tcttttgcct tggcagtatc ctgaacgccc ggaagctgca
     7321 cgacgatacg gtcggcaccg gactgctgga tgacgggttc ggccacgccc aactcgttca
     7381 cacggttgtg cagggtagtg atgttctgtt tgaccgcatc ggaacgcact ttattgaccg
     7441 cctcttccga aagcgtcaag acgatattgc tgccgtctga attcagcgtt gcttcaggaa
     7501 acagcttgcg caactgcggc agtgcctttt gcacatcacc tgcatcctgc aaagggacgg
     7561 tcaggctgtt tccagcctga cgcaccgtgc cgctgcggat tttttcgcgg cgcagttcgc
     7621 ggcggatgtc gcccgaataa cgttcaaacg ttttctgcat cgccgctttc atatcgacct
     7681 gcatggtgaa atgcacgccg ccgcgcaggt ccaaacccaa aaacatcgga ttggctttga
     7741 ttttcgccat ccattcgggg ctgtccgcca acaggttgag cgcggtaata tacccttcgc
     7801 ccaaagtgtt ttcgatgacg tcgcgcgctt taagctgcgt ttctgtgtct ttgaaacgca
     7861 ctttcagtga attgtccaca acaaacatcc cgtcggtctg aatacctgcg tttttcagcg
     7921 cggcatccac tttggattga gtctgttcgt tgatgatgat ggcttgtcgg ttggtcgata
     7981 cctgcacggc gggtgtttcg ccgaataggt tgggcagcga atacactgcg gcaaccgcaa
     8041 tcgtgaacac aatcagcaga tatttccata aaggataacg gttcatcatt gttccttaat
     8101 ggttggaacc ccaccctttc ggtggtgtcg gaatcgggct atttcagaag aggcaaaaac
     8161 ccttcccagc caggcaagac cggaaggcgg catcttgaat atgccgccct gcgtgtcgga
     8221 acatggtcaa gccttcggtt ggaattcaaa acaaagtgcc gcattcgggc tttccagatg
     8281 cggcttgtcg gcacaaatca atcgactttt gcggcaatcg cattgcgttc tacttcgacc
     8341 tcgatttttg taccctgtcc gatatccacg gtaaaaaact gttcgccgac tctggttacc
     8401 ttacccttga aacctgccgc caagaccact ttgtcgccga ctttcaaggc ggcaagcatt
     8461 gcctgatgcg ctttgaattt cttttgctgc ggacgcatga tcaggaagta gaacaccacc
     8521 ataatcaaca ctaaaggagc aaattgtgca acagcttgat tcataattta tccgttcttt
     8581 ctaatatggt tgaaaatcga gaggggtata taataacata agaccgtaaa caatatatcg
     8641 ggtttgccgt ccgtaccgac cgtataccgc agcctgcccg tccacaaacc catgtccttg
     8701 acccgcctaa tcttgaaatt ctatgcactg ttgcgccttt ttttgggcaa aaacgcccgc
     8761 accgcatgga tttcgcatcc cgcctgtgcc gggcacgaac ccggcgcaaa ccatcccgat
     8821 tcgcccgacc gcatcctctg catcgagcag gcattgcgcc gcgccggtat ttggcagcac
     8881 ctccaaacca tagaggcgga agaaatcagc gatacgcgcc tcgcacttgt ccactcgagc
     8941 aaatatctga accgtttgga atcttgcctg ccccaaaaag gcaagatttc ccgcctggat
     9001 aacgacactg caatcagcac aggctcgctg tctgccgcac gctttgccgc cggttcggca
     9061 gttcaggcag tcgacatggt catgaaccgt aaagcatggc atgccttttg cgccgcccgc
     9121 ccgcccggac accatgcggg cagcggcaaa gccggcggat tctgcctgct gaacaacgtt
     9181 gccgccggcg tcatgcatgc cgttgccgaa taccggctga accgcatcgc cgtcatcgat
     9241 ttcgatgtac actacggcga cggtacggca gaaatattca aagacgatcc gcgcatcctg
     9301 tttttcaacc tgtttgaaac cgaccttttc cccttccccg aaaacaacga tatgcccgac
     9361 ggcggcaata tggtgcacct gcccttgccg ccgggaacgg gcagccgcgc attccgcgaa
     9421 gccgtccgca gacagtggct gccccggctt gccgcattca aacccgaact ggtgctgctg
     9481 tcggcaggat tcgacgcaca ccgtctggac gaatcgggca ggcttaacct gcacgaggcg
     9541 gattttgcct ggctgacaca caaaatcatt cagacggcat cgggctgccc tggcaaaatc
     9601 gtatccgtac tcgaaggcgg ctacaccctt gaacctctgg cacaatctgc tgccgagcat
     9661 atccgcgtgc tggcagggct gggcaaatcc gatgccgcaa ccgcctatca gaaaacactg
     9721 gacccaacaa aaaaacggtt tgccaaaccg aaaaccggac aggtgcgcca acctacccaa
     9781 tccgaccgtt acg
//
LOCUS       DBBZYD010000078         9704 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.078, whole genome shotgun sequence.
ACCESSION   DBBZYD010000078 DBBZYD010000000
VERSION     DBBZYD010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9704
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.078"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(99..1460)
                     /gene="accC"
                     /locus_tag="ACJJDL_001597"
     CDS             complement(99..1460)
                     /gene="accC"
                     /locus_tag="ACJJDL_001597"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HGG7574278.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(1574..2026)
                     /gene="accB"
                     /locus_tag="ACJJDL_001598"
     CDS             complement(1574..2026)
                     /gene="accB"
                     /locus_tag="ACJJDL_001598"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HGG7574279.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQQ
                     VKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(2008..2265)
                     /locus_tag="ACJJDL_001599"
     CDS             complement(2008..2265)
                     /locus_tag="ACJJDL_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HGG7574280.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            2382..3422
                     /gene="queA"
                     /locus_tag="ACJJDL_001600"
     CDS             2382..3422
                     /gene="queA"
                     /locus_tag="ACJJDL_001600"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HGG7574281.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
     gene            complement(3896..4474)
                     /locus_tag="ACJJDL_001601"
     CDS             complement(3896..4474)
                     /locus_tag="ACJJDL_001601"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7574282.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYIDEVLTAGHGKLYQSDGRHRVN
                     PTEGYGTGGLLQGKKHMLSLTWNAPIEAFTREGDFFEGKGVDVLYMHFHKANEFLGMT
                     RLPTFLCNDVVKNPQVEKYLADYQAHLEKVFG"
     gene            4713..5612
                     /gene="crgA"
                     /locus_tag="ACJJDL_001602"
     CDS             4713..5612
                     /gene="crgA"
                     /locus_tag="ACJJDL_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HGG7574283.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(5841..9056)
                     /gene="carB"
                     /locus_tag="ACJJDL_001603"
     CDS             complement(5841..9056)
                     /gene="carB"
                     /locus_tag="ACJJDL_001603"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HGG7574284.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAMNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGILSDLDFAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECEARPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(9096..>9704)
                     /locus_tag="ACJJDL_001604"
     CDS             complement(9096..>9704)
                     /locus_tag="ACJJDL_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574285.1"
                     /translation="INIIATWAMALTYIFLLLFIIVFIPIQLYLENIKKKKFKSRIID
                     ILKNNHNNLDLNDIKQMTEAVNLNNFAARKIIKQLYYTDELNLNLVRQLQKEIQQEEP
                     FDGCSDELKPTLIGINELLETHGSESQKHLLTPIISELKELNQIKHDHKKMKTQSYIA
                     YIIAIISFFIGSISFYYTITAPSGKEIANTVVEQLKANQNQQ"
BASE COUNT         2136 a         2398 c         2674 g         2496 t
ORIGIN      
        1 ttaatccact atatcgaaat cggtttcaga cggcgcgggg caagggaaat gccgtctgaa
       61 cgcggacggg cggcttcaga cggcatatcg gcggcggttt acttgtcctg tttggctttg
      121 cgatcttcca gccagtgttc caaatagtgg atgctgacgc cgcctttttg gaaacccgca
      181 tcggcgaaca ggtcgcggtg aagcggcgta ttggttttga tgccggttac cgccagctcg
      241 gcgagtgcga cgcgcatttt cgccattgcc tgttcacgcg ttttgccgtg tacgcagatt
      301 ttgccgatca ggctgtcgta gtacggtggg atgcggtagc cttggtaaat gtggctgtcc
      361 acgcggatac cgaagccgcc gggcaggtgg cagctttcaa tcgggcccgg gctggggatg
      421 aagttgtacg ggtcttcggc attgatgcgg cactcaaacg cgtggccttc gacttgaata
      481 tccttttgtt tgtattgcaa aggcaggccg gcggcgatgc ggagttgctc ctgcacgatg
      541 tccacgccgg taatcagctc ggtaaccgga tgctcaacct gaacgcgcgt attcatctcg
      601 ataaagaaaa attcgccatc ttcgtacagg aattcaaacg tacctgcgcc acgatagccg
      661 atgcgtttgc aggcgtcggc acaggcgttg ccgattttgg cgcgttcttt ttcagtgatg
      721 aacggagccg gtgcttcctc gatgactttt tggtggcggc gttgcagcga acagtcgcgc
      781 tcggcaaggt agatggcgtt gccgtgttcg tcggcaatca cttggatttc gacgtggcgc
      841 ggacgttgca gatagcgttc catgtaaacc atcgggttgc cgaatgccgc gcctgcttct
      901 gccttggtca tttcgacaga ttggaggagg tcttcttttt tctcgaccac gcgcataccg
      961 cgaccgccgc cgccgccaga ggctttgata atgacgggat aaccgacttt atcggcgatt
     1021 ttgaggattt cttcgccgtc gtcgggcaat gcgccgtcag aaccggggac gcagggtacg
     1081 cctgccgcta tcatcgcgtg tttggcggag actttgtcgc ccatcaggcg gatggtgtcg
     1141 ggtttcgggc cgataaaggt aaagccggac tgctcgacct gttcggcgaa atcggcgttt
     1201 tcggcaagga aaccgtagcc cggatggaca gcgtccgcgc agcttacttc ggcggcggcg
     1261 ataatggcgg ggacgttaag gtagctttgc gcggaagcgg cagggccgat gcacacggat
     1321 tcgtcggcga gtttgacgtg caggctgtct ttgtcggcct cggaatgcac ggcgacggtg
     1381 gcaatgccca tttcgcggca ggcacggagt acgcgtaatg cgatttcgcc tcggttggcg
     1441 attaaaactt ttttcagcat gatgactgtt cctgtggttc cggcaacccg tccgtaaaaa
     1501 aaaaggtgcg ggaacgccga agggggaaag catttcagac ggcatcggaa gtttatgccg
     1561 tctgaaaaca ggattatccg atgatgaaga gcggttcgcc gaattcgacg ggcgtaccgt
     1621 tttcgaccag aatttctttg accgtgccgg atttttcggc ttcgatttcg ttcatcagct
     1681 tcatcgcttc gatgatgcac agcgtgtcgc cggctttaac ctgttggccg acttcgacaa
     1741 aaggcgcggc attcgggccg ggtgcgcggt agaacgtgcc gaccataggc gatttttgcg
     1801 cgtcggacaa atcgcgggcg gcaggtgcgg cgggcgcgga tgccgcaacg ggtgcggcgg
     1861 caggcgttac ggccggcgcg gcggcaggta cgggcgcggc gtaaacgggt gcggcggcga
     1921 tggttcgggt gatgcggact ttttcctcgc cttcggttac ttcgatttcg gcgatacccg
     1981 attcttcaac caaatcaatc agttttttta atttgcgcaa atccatttct gttcctttaa
     2041 aggctgccgg tgttccggcg ggttgttgcg ttggtttttc agaaaacagc cggcttgcgg
     2101 caacggcgca aaccgggcgg aatggtgttc ggatacggtt ttcctgtggt ggaaaacaac
     2161 cgtgagaatg tgtttatttt cccgaagttg tcggtaaatg tccagtaaaa tatcaaaaaa
     2221 cggcggtttt tgggggaaat gtgcaggaag cttgattttg cgcacaagat gccccgggtc
     2281 aagagtgttt attctaatct gttggttttt cggacaaaga tgccgtctga aaaagggcta
     2341 aagtgcgtat aatggcggct tgcccgaacg agagtgtaaa aatggatatt tcagattttg
     2401 attttaccct gcccgaaaag ctgattgccc agcatccgcc cgaagtgcgc ggcagcagcc
     2461 gccttttggt tgcgttgccc gatatgccgc tgcaagaccg ggtgttcggc gatttgccgg
     2521 attatgtcga ggcgggcgac gttttggtgt tcaacaacac caaagtcatg aaggcgcggc
     2581 tgtttgggca gaaagacagc ggcggcagga tcgaagccct gattgagcgc gtgttggaca
     2641 accataccgc actggcgcac atccgttcgt ccaagtcccc caagcccggt atggggctgg
     2701 tgtttgaagg cggcatccgt gccgtgatgg tcgggcgtga gggcgaactg ttctgcctgc
     2761 gttttgaagg cggtcaaacc gtttacgaac ttttggaaca gaacggccat ttgcctctgc
     2821 cgccttatat cgaacgtgcc gccgacgcgg acgacgacag ccgttatcaa accgtttatg
     2881 ccaaatatca gggcgcggtc gccgcgccga cggcgggcct gcattttacg gaagaacttt
     2941 tgcaccgtct gaaagacaaa ggcgcggtaa ccgcagaagt aactctgcac gtcggtgcgg
     3001 ggacattcca acccgtgcgt gtggaaaaaa tcgaagaaca caaaatgcac agcgaatggt
     3061 ttgaagtgcc gtctgaaacc gccgccgccg ttgaggcggc aaaagcccgg gggaacaaag
     3121 tctgggcggt cggcacgact tccatgcgcg ccctcgaatc tgccgcgcgt gcgacgggtc
     3181 gtctgaaagc ggggcagggc gacaccgata ttttcatcac gccgggctac cgttttaatg
     3241 ttgccgacag gctggttacc aatttccatc tgccgaaatc gacgctgctg atgcttgtca
     3301 gcgcgttttc gggtatgggt catatccgcg ccgcgtatcg ttatgcggtc gaacgcgaat
     3361 accgtttctt cagctacggc gatgcgatgg ttttggggcg gaacgaaggg gtggtacgtt
     3421 agaacagcct caagtctatt gggggaagac aagtgccgtc tgaacggatg ttcggacggc
     3481 attcttttgt tgatttgaat gaaaggaact gcatgacata tagtggatta aatttaaatc
     3541 aggacaaggc aacgaagccg tagacagtac aaatagtacg gcaaggcgag gcaacgctgt
     3601 actggttttt gttaatccac tatagattca ggcgcgagag gcgagaaact cagtcattgt
     3661 tgatgacgcg caatacgtta aaattcattc cgttttggtc gtataaacat attacatacg
     3721 ccattttttt gtattcaagg ctgcctgaaa acagtgggca agaatatcta acccaacgaa
     3781 aagctgaaaa agcaacaaaa aataatctgc accttagtcg gttggttagt ccaaccttag
     3841 gggtgcagac cattcaatct ttcaggctgc ctttgtttgt ttataagata aatttttagc
     3901 cgaacacttt ttccaagtgt gcctgataat ctgccaagta tttttccact tgtggatttt
     3961 taaccacatc gttacataag aatgtcggca ggcgggtcat acccaaaaac tcgttggctt
     4021 tgtggaagtg catatacaaa acatcaacgc ctttgccttc aaagaaatcg ccttcgcggg
     4081 taaacgcctc aatcggcgca ttccaagtca gtgaaagcat atgttttttg ccttgcaaca
     4141 agccgcctgt gccgtagccc tcagtcggat tgacgcggtg tctgccgtcg ctttggtaga
     4201 gtttgccgtg tccagcggtt aatacttcgt ctatgtattt tttcactgtc caaggctcgt
     4261 gcatccacca gcccggcatc tgccaaatca cagcatccat ccaaacgaat ttttcgattt
     4321 ctgcctcaac atcatagccg gcatcaatca cggtttcttg aacattgtgt ccgagcgcgg
     4381 tcaaaacttc tttcgctttt ttgtgaagcg tgcggtttaa cccgccgtga gaatgtccga
     4441 acgctttgcc gccgtctaat aataaaatat tcatttgtta cctcgtttgt gaattgatga
     4501 atgtattgtg ccgttttact ttataattta aaagtgcaaa aataagaaaa cacttttgcg
     4561 tcaaatgaaa taatcagatg ttccaacaca cgggatggca cataaagcac cgccctgtgt
     4621 gccgtcctga ttcggaaggg gttacacccc tcccaaataa agtctgatcc tgccgcccta
     4681 aagggcgggg ttccaaccga aaaggaaaca cgatgaaaac caattcagaa gaactgaccg
     4741 tatttgttca agtggtggaa agcggcagct tcagccgtgc ggcggagcag ttggcgatgg
     4801 caaattctgc cgtaagccgc atcgtcaaac ggctggagga aaagttgggt gtgaacctgc
     4861 tcaaccgcac cacgcggcaa ctcagtctga cggaagaagg cgcgcaatat ttccgccgcg
     4921 cgcagagaat cctgcaagaa atggcagcgg cggaaaccga aatgctggca gtgcacgaaa
     4981 taccgcaagg cgtgttgcgc gtggattccg cgatgccgat ggtgctgcat ctgctggcgc
     5041 cgctggcaac aaaattcaac gaacgctatc cgcatatccg actttcgctc gtttcttccg
     5101 aaggctatat caatctgatt gaacgcaaag tcgatattgc cttacgggcc ggagaattgg
     5161 acgattccgg gctgcgtgca cgccatctgt ttgacagccg cttccgcgta atcgccagtc
     5221 ctgaatacct ggcaaaacac ggcacgccgc aatctacaga agagcttgcc ggccaccaat
     5281 gtttaggctt caccgaaccc ggttctctaa atacatgggc ggttttagat gcgcagggaa
     5341 atccctataa gatttcaccg cactttaccg ccagcagcgg tgaaatctta cgctcgttgt
     5401 gcctttcagg ttgcggtatt gcttgcttat cagatttttt ggttgacaac gacatcgctg
     5461 aaggaaagtt aattcccctg ctcgccgaac aaacctccga taaaacacac ccctttaatg
     5521 ctgtttatta cagcgataaa gccgtcaatc tccgcttacg cgtatttttg gattttttag
     5581 tggaggaact gggaaacaat ctctgtggat aattctataa aaacctgcca taaaattgtt
     5641 tttactcact taataacttt gagaaaaaat aaataagatg atgtatagcc gcggcaatgg
     5701 cagtctatat ggggagcgtg atagggctgt tccttatgta cggcttgtgt gtggcaacat
     5761 cggctttcca aatgacaaaa tgccgtctga aaccgtaaaa aaaaaaggtt tcagacggca
     5821 ttttcaacct gattcaggca tcagttgcgg tttttcaaac gcccgtgcag ttcttgaacg
     5881 ctgtacacgc ccaagtggtc gcggcttttc gcgccttcgc tcatcgcttc gccgccggcg
     5941 gtggtggtgt attgcggcac gcgttgctgc aatgcgcttt ggcggatgat gtggctgtcg
     6001 gacacggatt gcggatcgct ggaaacggta ttcacgacca gtgcgatttc accgtttttc
     6061 agcgcgtcgc cgatgtgcgg gcggccttcg gggactttat tgatggtttg gacaatcagc
     6121 ccgtgttcgg tcaggtattg cgccgtgccg cgcgtggcgc agatgccgta gcctaaggct
     6181 tggaagtttt tggcggtttt aatgacgcgt tctttgtctt cttcgcgcac ggagaggaag
     6241 attttgccgg tcgggttgag gcgttcgcct gcgccgagtt gggctttgta gtaggcttcg
     6301 ccgaagcttg cgcccacgcc catgacttcg ccggtggagc gcatttccgg acccaaaatc
     6361 gtatccacgc ccgggaattt gatgaagggg aacacggctt ctttaacggc atagaaatca
     6421 gggacgactt ctttttccac gccttgttct ttcagggaaa tgcctgccat acagcgtgcg
     6481 ccgactttgg cgagcggcac gccggtggct ttggagacga aggggacggt gcggctggcg
     6541 cgcgggttca cttccaatac gaacactacg ccgtcctgca cggcaaactg cacgttcatc
     6601 agtccgacca cgcccagcgc gtacgccatc gctttggttt ggcggcggat ttcgtcttgg
     6661 atttcttcgc ttaaggagta gggcggcagc gagcagccgg agtcgccgga gtggatgccc
     6721 gcctgttcga cgtgctgcat gatgccgccg ataaccacat ctttgccgtc tgaaacgcag
     6781 tccacatcga cttcaatcgc gttgttcagg aagaagtcga gcaacacggg gctgtcttcg
     6841 gaaacctgca cggcttcgcg catatatttt tgcaactgct cggcagagtg gacaatctgc
     6901 atcgcgcgtc cgcccaaaac ataagacggg cgcacgacca gcggataacc gatttcttcg
     6961 gctttgacga gtgcttcttc ttcgttgtgg gcgatgcggt tgggcggctg gcgcaggcct
     7021 aagtcgttca acactttttg gaagcgttcg cggtcttcgg cggcatcgat gctgtcggcg
     7081 gacgtgccga tgatgttcac gccgttttca accagcgcgt tggcgagttt gagcggggtt
     7141 tgaccgccgt aatgcacaat cacgccccac gggttttcgg tgcggacgat ttccaacacg
     7201 tcttccaatg tcagcggctc gaaatagagg cggtcgctgg tgtcgaagtc ggtggacacg
     7261 gtttctgggt tgcagttgac cataatcgtt tcaaaaccgg attcgcgcag ggcgagcgcg
     7321 gcgtgaacgc agcagtagtc aaactcgatg ccctgaccga tgcggttcgg gccgccgccg
     7381 agaatcatca cttttttgcg gtcggaagga cgcgcttcgc attcctcttc gtaagtggaa
     7441 tagaggtagg cggtttcggt ggcgaactcg gcggcacagg tgtcgacgcg tttgtaaacc
     7501 ggatgcagct tcagcgcgta gcggtgttcg cgaacttctt tttcgcttac gttcaacaat
     7561 tgtgccaaac gtttgtcgga gaagcctttg cgtttcagac ggcgtagggc ggcgaaatcc
     7621 aaatcactca aaatgccgtc tgaaaccgct ttttcttcct tcatcaagtc ttcgatttgc
     7681 gccaggaacc aagggtcgat ggcgcagatt tcgtggattt cttccagcgt gaagccggcg
     7741 cggaacgcgt ctgccacaaa cagcatacgc tcagggccgg ggttcgccag ttcgcggcgg
     7801 atttccgctt tgtcggagct tctcggattg aagccgcaca agccggtttc caagccgcgc
     7861 aaggcttttt ggaagctttc ctgaatcgtg cggcccatcg ccatcacttc acccaccgat
     7921 ttcatctgtg tggtcaggcg gtcgtctgcg gcagggaatt tttcaaacgc gaaacgcggg
     7981 attttggtta cgacatagtc gatggacggc tcgaacgacg cgggggtttt gccgccggtg
     8041 atgtcgttgc gcaactcgtc cagcgtaaag ccgaccgcca gcttggccgc caccttcgca
     8101 atcgggaagc ccgtcgcttt ggaagccagc gcggacgaac ggctcacgcg cgggttcatc
     8161 tcaatcacaa tcatctcgcc gttttcaggg ttcatcgcaa actgcacgtt tgagccgccc
     8221 gtgtccacgc cgatttcgcg caataccgcc aacgaagcgt tgcgcatgat ttggtattcc
     8281 ttgtccgtca gcgtttgcgc cggcgcgacc gtaatcgagt cgcccgtatg cacgcccatc
     8341 gggtcgaagt tttcaatcga gcagatgatg atgcagttgt cgttcttgtc gcgcactact
     8401 tccatctcgt actctttcca gccgagaacg gactgctcaa tcagcagctc gtgcgtgggc
     8461 gaggcatcga aaccgcgttc gcaaatcgcc aaaaactcgt ctttattgta ggcaatgccg
     8521 ccgcccgaac cgcccatcgt gaaagaagga cgaatcaggg tagggaagcc gacctgttcc
     8581 tgcgccgcca aagcttcgtt cattgtgtgg cagacaaaag atttcgggca agacaaaccg
     8641 attttttcca tcgcctcttt aaagcggccg cggtcttctg ctttgtcgat ggcgtcttcc
     8701 gtcgcgccga ttaattcaac attgtatttc gccagcacgc cgttgcgcgc caaatccagc
     8761 gcacagttca gcgcagtttg accgcccatg gtaggcagaa tcgcatcggg ccgctctttg
     8821 gcaataattt tttccaccgt ctgccacata atcggctcga tgtaggtaac atccgccatt
     8881 tcggggtcgg tcataatcgt ggcggggttg gaattcacca aaatgacttt atagccttct
     8941 tcacgcaagg ctttgcaggc ctgtgcgccc gaatagtcaa attcgcaggc ctgaccgata
     9001 acgatagggc cggcgccgat gataaggatg gattttaggt cggtacgttt gggcatgatg
     9061 ggtctttcta tgaaatcaaa tgtttagcta aaaatttatt gctgattttg attggctttt
     9121 aattgctcta cgacagtatt ggcaatctct tttcctgatg gggctgtaat tgtgtaataa
     9181 aagctaatac tgcctatgaa gaaactgata atggctatga tataggctat ataactttgt
     9241 gttttcattt ttttgtgatc atgtttgatc tgatttaatt cttttaattc agaaataatt
     9301 ggagttaata aatgtttttg actttcagat ccatgcgttt ccaaaagttc atttattcct
     9361 attagtgttg gttttagttc gtctgagcag ccatcaaaag gttcttcttg ttggatttcc
     9421 ttttgtaact gtctaactaa atttaaattt aattcatcag tgtaatatag ttgcttaata
     9481 atttttctgg cagcaaaatt attaaggttt actgcttctg tcatttgttt tatatcatta
     9541 agatctaggt tattgtgatt attttttaat atatcaatta ttctagattt aaatttcttt
     9601 ttctttatat tctctaaata tagctgaatt ggaataaaaa caattataaa gagcaaaaga
     9661 aatatatatg ttagtgccat agcccatgtg gcaattatat ttat
//
LOCUS       DBBZYD010000079         9359 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.079, whole genome shotgun sequence.
ACCESSION   DBBZYD010000079 DBBZYD010000000
VERSION     DBBZYD010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9359
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.079"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(263..2953)
                     /gene="glnE"
                     /locus_tag="ACJJDL_001605"
     CDS             complement(263..2953)
                     /gene="glnE"
                     /locus_tag="ACJJDL_001605"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HGG7574286.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNGIKSLVRPFVFRKYLDYGAYEAMRKLHRQISS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKLAETGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQQQLLAESMGFDSYAAFSDDL
                     NAHRTKVNQLFNEILSEPEEQTLDTSEWQWAWQEKPDEEGRRCRLKAHGFDAETVAAR
                     LDQIRHGHKYRHLSAHAQPRFDAVVPLFVQAAAEQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRRFQHTQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEMLTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCSLIDKNLAEQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVTGELLAHYGNVRKLWRDVFGEEAATA"
     gene            complement(3151..3486)
                     /locus_tag="ACJJDL_001606"
     CDS             complement(3151..3486)
                     /locus_tag="ACJJDL_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574287.1"
                     /translation="MPSEALSGLQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WNGVAKAAKAVGEGMIEAGNEHKALKMEYAEKSSEELHEIVKSDGFFKNSTREKSAAY
                     AILKERGEV"
     gene            complement(3500..3973)
                     /locus_tag="ACJJDL_001607"
     CDS             complement(3500..3973)
                     /locus_tag="ACJJDL_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HGG7574288.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(4026..4307)
                     /locus_tag="ACJJDL_001608"
     CDS             complement(4026..4307)
                     /locus_tag="ACJJDL_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574289.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            complement(4394..4717)
                     /locus_tag="ACJJDL_001609"
     CDS             complement(4394..4717)
                     /locus_tag="ACJJDL_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574290.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            complement(4856..5035)
                     /locus_tag="ACJJDL_001610"
     CDS             complement(4856..5035)
                     /locus_tag="ACJJDL_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574291.1"
                     /translation="MPSERTFCRSDGIFISFSCLPPFENPLRAALFETKQTPAANRTI
                     LIRSQSKSGGKLLNI"
     gene            complement(5051..6058)
                     /locus_tag="ACJJDL_001611"
     CDS             complement(5051..6058)
                     /locus_tag="ACJJDL_001611"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HGG7574292.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNMVYKLGLIPVTGNRTKPV
                     KLMGLDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPNPQPGNPQPRLFRVPE
                     YQGIINRMGFNNHGIDAMIQNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVHGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAAEKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     Q"
     gene            6290..6526
                     /gene="acpP"
                     /locus_tag="ACJJDL_001612"
     CDS             6290..6526
                     /gene="acpP"
                     /locus_tag="ACJJDL_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG7574293.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            6682..7929
                     /gene="fabF"
                     /locus_tag="ACJJDL_001613"
     CDS             6682..7929
                     /gene="fabF"
                     /locus_tag="ACJJDL_001613"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HGG7574294.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(8171..9124)
                     /locus_tag="ACJJDL_001614"
     CDS             complement(8171..9124)
                     /locus_tag="ACJJDL_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HGG7574295.1"
                     /translation="MGFLIGLSRNLTRFTALVILLASAVAFIGPASFAWVKGDVQVLV
                     LGIIMLGMGMTLGREDYRILAQRPLDVFIGAAAQYTVMPLLAIGIAKLFDLSPGLTLG
                     LVLVGTCPGGVSSNIMSFLAKGDVAFSVGMTTVSTVLAPAVTPLWMTCLVGQTVDMDG
                     WGMFRFMLLVTLLPVVLGSAANILLHGKHWFENVRAVMPGVAVLAFACIVGGVASVHG
                     HRFAESALVMVLAIAVHNIAGYVSGYYAAALFGMDTAKKRTLAIEVGVQNAGLATGLS
                     AKFFPGNPESAVAAAVACVWHSVSGTVLGNLFALWDKRRDA"
BASE COUNT         2230 a         2586 c         2365 g         2178 t
ORIGIN      
        1 tagaatgcgc tattttaatg gaaacggcgg ggttttaaac ggttcttatt tgtttgtttt
       61 gatttttgct tgggtaaaaa atcccatcat tcccacaaaa acagaagcct gaaatcccgt
      121 cattcccgcg aaagaggaat ccggtttttg ggtttcagcc attcccgata aatcgcttta
      181 gctctgccgc aaccttaaaa cggcacggta cgaaaatacc gtctgaaacc cagattgtca
      241 ggcttcagac ggcatttttt gttcaggcgg ttgccgcttc ttcgccgaac acgtcccgcc
      301 acaatttcct gacattgccg taatgtgcca acagttcgcc ggttacttcg gtttttgccg
      361 cgtcgcgcag tttggtgttg tgctgctgcc ggcggtagaa gcggtaggcg gtgcggcttt
      421 gttcggcgag gtttttgtcg ataaggctgc agtcggcggc gatgtttaag agggcgatgt
      481 tgccgtagtt gtccaagagt tgcggatact ggcgggcatg ggcaagtatc agatattgga
      541 cgataaattc gacatcgacc acgccaccgc gcgcgtattt gacgttgctg tcggcaggcg
      601 gatgggtggg gaacattttt tcgcgcattt cgataatttc gcctgctaag gcggtttggt
      661 cgcgttcggc agtcagcatt tcggtgcgga tgcggtcgaa ggccgtctga atttcgggtg
      721 tgccgcagat gaagcgggcg cgggtgaggg attggtgttc ccacgtccag gcgttttcgc
      781 gctggtattt ttcaaaggcg gcgatgctgt gggcgaggaa accggcgtcg ccattagggc
      841 gcaggcgcag gtcggtttcg tagaggctgc ctgcgccggt ggcggcggaa agccagttgg
      901 tcaggcgacg ggcgaggcgg ctgtacacgt cgcctgcgtc ggggtgggga tcgtcgtaga
      961 gatagacgag gtcgaggtcg gaggcgtagc cgagttcttt gccgccgagt ttgccgtaac
     1021 caacgacggc gaattgcggg gtgtcgcggt gttttttggg catgtccgcc cacgcgcaca
     1081 gcagggcggc ggcgaggatg gtgtcggcga gggcggagag ttggtcggag agggattcta
     1141 ccgtccacag tccggcgagg tcttggacgg cgagacggaa gacttgggtg tgctggaagc
     1201 ggcgcagggt gtccatttgc gcttcagtat cgccgccgca ggctttgagg tcgtctgaaa
     1261 gggcggcggc gagtgcctgc caatcaaacg cggtatccaa aagctgcgcg ctgatgagtt
     1321 cgtccaacaa aatcggatat ttgttcagat acgccgccac ccaagaactt tggcccataa
     1381 tctgcgccag ttgcgccaag gtttgcggat gttcgttgag gaaggcgaga taggcggatc
     1441 ggcggctgat gttttcgaga aaatccaaca gccgcatcaa tgtatcggtc gggttgcttt
     1501 gctctgccgc cgcctgtacg aacagcggca caaccgcatc gaaacgcggc tgggcgtgtg
     1561 cggaaagatg gcggtattta tggccgtggc ggatttggtc gagccttgcg gcgacggttt
     1621 cggcatcgaa cccgtgcgcc ttcagacggc atcgccgccc ttcttcgtcg ggcttttcct
     1681 gccatgccca ttgccattcg ctggtgtcta gggtttgctc ttcgggttcg ctcaaaattt
     1741 cgttgaacaa ctgattgact ttggtgcggt gggcattgag gtcgtctgaa aaagcggcgt
     1801 agctgtcgaa acccatactt tcggcaagca gttgctgctg ttcgggcgaa gccggcaggg
     1861 tttgggtttg ccggtcatcc cagtattgca ggcggtgttc gacatcgcgc aggaatcggt
     1921 aggcggcaag cagggtttcg acgttttcag acggcatgat cccggtttcg gcaagtttct
     1981 tcagcgtttc ctgcgtgcct ttcagttgca gcgcacgcat ttggccgccg cgtatcatct
     2041 ggaaaatctg ggcgataaat tcgacttcgc ggatgccgcc cgcgccgagc ttgatgttgt
     2101 ccgccatgcc ttttttgctg acttcgctgc tgatttggcg gtgcagctta cgcatcgcct
     2161 catacgcgcc gtaatccaga tatttgcgga acacgaaggg gcgcaccagc gatttgattc
     2221 cgttcggata cggcgtaacc acgcggcctt tgcaccacgc gtagcgttcc cattcgcgcc
     2281 cctgcgtaat caggtattgc tccagcgcgg tttcgctcaa caccaacgcg cccgaatcac
     2341 cgtccggccg cagccgcata tcgacgcgga acacctgccc gtcggcggtg atgtcgttca
     2401 acagcgcaat cagtttctgc ccgactttgg tgaaaaactc ctgattgccg cgttcgcgcc
     2461 tgccgtcggt gtcgcccgat tcgggataga cgaaaatcaa atcgatgtcg gaagacacgt
     2521 tcaactcata gccgcccgcc ttgcccatcg ccaccacgct caaatgctgc ggcgatttgg
     2581 tataacgccc gatcggcgtg ccgtacatgt cccgataata ggcgtaggca aaatccagcg
     2641 cggtattgac ggcaaaatcg gcaaacagcg taatcgtgcg ggttacttcg ttcaaatcgc
     2701 tgatgcggtt tatatcgcgc acgataatct gcgacaccac ataacggcgc aacccgcgca
     2761 actgccgcgc caattcttcc tcgttttctt ccgcacggat tttgtcccag tcggcaaagg
     2821 cttggaaatc cgcttcggtc aaaaccttgt ccagcatagg caggaaaatt tcgggcttga
     2881 gtttgccgtt gtcgagctgg cgggcgagga agagggaatg gcggcgggcg gtgtcgaggc
     2941 ggttgtcgga catttcggat tccgtttgaa aaaatggcag gaagatgatg gcggattcac
     3001 ttcaaatcag gacagggcga ggggatgccg taccggttta aagtcaagcc actatatcat
     3061 agcaaccttc gatgccgtct gaaaccttgc cccgacatcc agacggatgc ctgccgataa
     3121 aaaacagcgg caaatgccgc cgtttcctgt tcacacctcg ccacgctctt ttaaaatagc
     3181 ataagccgca cttttctccc gtgtggaatt tttaaaaaaa ccatcactct tgacgatttc
     3241 atgcagctcc tcacttgatt tctccgcata ttccattttc aacgccttat gctcattgcc
     3301 ggcttcaatc attccctctc ccactgcttt tgctgctttt gccacaccat tccaaaaacc
     3361 cataatcatg tcctccaatc gtttcaaata aataaggtcg ttgtttctgt caagaaacaa
     3421 cgacagttta taaactgtcg gaaaacaaaa tgccgtctga aggccggata atgcttcaga
     3481 cggcatcgga ttgccggttt taaccctgcc ctccgccgtt gttcaaatag tgttcccagt
     3541 gagaatataa ccgggcaata ttttcttcat aggtgtgggc agaaggaata taaccgtctt
     3601 tgggcggcat atacctgaca aatgattcta tttcttccgg ataatcaaaa tctgcataaa
     3661 ttttttcaac ttcccccaaa ggatcctcaa attcttcttt tctatggaat acatcgctta
     3721 agaggacgta cagccaattt ttaggggaat aatccctcat ttccgaagcc aaatcttcca
     3781 gaacaggctt taattcaaga atattggatt tgttgattaa agatagtttg aacacacgtt
     3841 catcatgatc tgaaagcgtc atttttcggg cataagctgc cacatcagcc caacccaagt
     3901 atttattccc atacccccac agaatatcct tccaagaaag acggactttt tgcgcggtta
     3961 aatcaaggtt cattttttac tccgattgcc tgccccgtca ttccgcccct tccgattgac
     4021 gcctgttacg aaaagtcttc caaatgacgg ctgattgcct cttcaacagt cggatgccaa
     4081 tccataaatg aagcctgcaa ttcctctaaa accaactcat tgaataaatc atccaaattc
     4141 cgccaatccg ttttttcatc cggatagatg aaatttgcca taacgacagt atgtttgttt
     4201 tgggaataat ccgataaggc gcaaatcatc agataccgcc ccgaatgctc cagataaaaa
     4261 attcgttttt ccaaaggaaa ccggttattc cgttgcccgt tttccatttt tcatcctttt
     4321 taacgtatcg gcttccgcgt ccttcaaatt gagttacctg ccttccgcca agcaaacgcc
     4381 cgcgcccctt tcatcatttg aatatccgtt tgaccatatt taccagataa ctatcttctt
     4441 tatataaatc aatcagcaaa ggcacgatac ccggctcata aaataattct gtcgtatcag
     4501 atgtttcttt taacgcggaa attatctcca acagttcata cccgtatcgg ggataagcaa
     4561 acaaataggg gactgcttcc cgcaaacatg aaaatgcttc gtaactttgc atttcccata
     4621 tatgttcatc tttaaaatca ctcaaatacc attcatccaa ttcactttcc ggatcggata
     4681 tcaatcggat aaattcattt agttcgtcct taaacatatc aaatccttaa atataaaatc
     4741 ttttgattat ccgccgtatc cttattttcc acatcatgaa tttcaacgcc gttcatattt
     4801 tgcgttttct caaaccgtcc accacggcat aaaattattt tttcatatca attatttata
     4861 tgtttaacaa cttaccgccg gacttgcttt ggctgcgtat caagattgtc cggttcgcgg
     4921 cgggcgtttg ctttgtttca aacagggcgg cgcgtaaggg attttcaaag ggcggcaggc
     4981 aggaaaagga aataaaaatg ccgtctgaac ggcaaaacgt gcgttcagac ggcattttgt
     5041 gcgggacgcg tcattgcgcc aaagccttca aacattcttt gaccaatgcc ggacctttgt
     5101 atatcaatcc gctgtacacc tggacggcag ttgcgcccaa gcggattttc tctgccgcgt
     5161 ccctgccttc cataatgccg cctacgccga taatcggcag cttgccgtcg atgtggtctg
     5221 ccaacagctt caacacccga ttactttttt catgaacggg cagcccgctc aaaccgccct
     5281 gctcgcctgc gagcggatgg ctgccgagac ttgatttgtc gatggtggta ttggtagcga
     5341 tgatgccgtc catttcgacg gatttgacaa cgtgggcgat gtcttcgatt tgtgcttcat
     5401 ccaaatcggg ggcgattttg acggcgagcg ggacgtattt cccgtgtaca gaggcaagct
     5461 gtgcctgttt gtttttcaaa gcctcaagca atgcgctcaa ctcgtcgcca ccttgcagcg
     5521 cgcggaggtt tttagtgttg ggcgaggaaa tattgacggt aatgtaactt gcgtgtgcgt
     5581 aggctttttc gaggcagatt aaataatcat cggcagcgtt ttcaatcggt gttacagcgt
     5641 ttttgccgat gttgatgccc aatacgccgc tgaatttact tttttcgatg ttttgaatca
     5701 tggcatcgat gccgtggttg ttgaagccca tgcgattgat gatgccttga tattcgggaa
     5761 cgcggaagag gcgcggctgc gggttgccgg gctgcgggtt gggcgttacc gtgccgattt
     5821 cgatgaaacc gaagccgagc gcgcccaatg cgtctatata ttcgccgttt ttatcgagtc
     5881 cggcggcaag cccgacaggg ttgggcaaat ccaaacccat cagttttaca ggtttggtac
     5941 ggttgccggt tacgggaatc agacccaatt tataaaccat gttgagcgcg tcgagcgtga
     6001 agtggtgggc tttctcggca tcgagtgcaa acaggatgcg gcgggcaagt ggatacatga
     6061 cagggctttc tgcttcagat ggaaatgccg tcattttaac cgaaatcccg tcaaacatac
     6121 ggcacacagg tcaaacttga acgacaaaac ccgccgcacc caaaaatgta caaatcggca
     6181 aatattgata taatagtcat tagatagaaa actctattaa aagtcggtac aataccaccg
     6241 atttatttcc cttaaacaac ctgccgcaag gcataaagga acgactgata tgtcaaacat
     6301 cgaacaacaa gttaaaaaaa ttgttgctga acaactgggc gtaaacgaag ccgacgtgaa
     6361 aaacgaatct tctttccaag acgacttggg cgcggattct ttggacaccg tggagctggt
     6421 tatggctttg gaagaagcat tcggctgcga aatccccgac gaagatgccg aaaaaatcac
     6481 caccgtccaa ctggctatcg actacatcaa tgcccacaac ggctaaccgg tcgtcgcccg
     6541 acacaacagc ctctgctgca ccgcgcaata gaggcttttc ccttatatgg caaactgttt
     6601 gaacccctgc cgcaaattac agacggcatc tgcacgacag ccgcatatgc ccccattccg
     6661 acaaccaaca gcgaggttat catgagtcag agaagagtag tcattacagg cttaggtcag
     6721 gtttcccctg tcggcaacac tgtcgcagag gcttgggaca ccctgctcgc cggcaaaagc
     6781 ggcatcggcg cgattacccg ctttgacgca tccgacatca acagccgtgt cgccggcgaa
     6841 gtgcgcggtt tcgacatcgg acaatacatc agcgcgaaag aagcgcgccg gatggacgta
     6901 ttcatccact acggcattgc cgccgcattg caggcaatcg ccgattcggg cttggacgat
     6961 gtggaaaacc tcgacaaaga ccgcatcggc gtgaacatcg gttccggcat cggcggactg
     7021 cccagcatcg aggtcaccgg caaagccgta atcgaaggcg gcgcgcgcaa aatcaaccct
     7081 ttctttatcc ccggttcgct gatcaacctg atttccggac acgttaccat cctcaaaggc
     7141 taccgcggcc cgagctacgg gatggtttcc gcctgtacca ccggcgcgca cgccatcggc
     7201 aattccgccc gactgatcaa atacggcgac gcggacataa tggttgccgg cggcgcggaa
     7261 ggcgcaatca gcactttggg cgtgggcggt tttgccgcga tgaaagccct ctccacccgc
     7321 aacgacgacc ccgccaccgc ttcccgtccg tgggacaaag gccgcgacgg cttcgttatc
     7381 ggcgaaggcg cgggcatatt ggtgttggaa gaattggaac acgccaaaaa acgcggcgcg
     7441 aaaatctacg ccgaaatcgt cggcttcggc atgagttccg atgcttacca tatcaccgcg
     7501 ccgaacgaag aaggccccgc ccttgccgtt acccgcgcgc tgaaagatgc cggcatcaat
     7561 cccgaagacg tggattacgt caacgcgcac ggcacgtcca cccccttggg cgatgccaac
     7621 gaaaccaaag ccctcaaacg cgcgttcggc gaacacgcct acaaaaccgt cgtcagctcg
     7681 accaaatcca tgaccggcca cctgctcggc gcggcgggcg gcgtggaggc cgtgtacagc
     7741 attttggcga tacacgacgg caaaatcccg ccgaccatca acatttttga acaagacgtt
     7801 gaagccggct gcgatttgga ctactgcgcc aacgaagcgc gcgacgcgga aatcgacgtt
     7861 gccatttcca actccttcgg cttcggcggc accaacggca cgctggtctt caaacgcttc
     7921 aaaggctgat tccgcaaagc cgccgccgac atcgaaatgc cgtctgaaac cgtttcagac
     7981 ggcattttta tagtgattaa caaaaatcag gacaaggcgg cgagccgcag acagtacaaa
     8041 tagtacggaa ccgattcact tggtgcttca gcaccttaga gaatcgttct ctttgagcta
     8101 aggcggggca acgccgtacc ggtttaaagt taatccacta tatatcgtgg gacggttcgg
     8161 acacgcccga ctaagcgtcc cgacgcttgt cccacagagc gaacaagttg cccaataccg
     8221 tccccgaaac cgaatgccac acgcaggcga ccgccgccgc aaccgccgat tcggggttgc
     8281 ctgggaaaaa tttcgcgctc aatcctgttg ccaaaccggc attctgcacg ccgacttcga
     8341 ttgccaaggt gcgttttttt gccgtatcca taccaaacag cgcggcggcg taatagcctg
     8401 acacatagcc ggcgatattg tgtaccgcaa tcgccaacac cattaccaac gccgattcgg
     8461 caaaacggtg tccgtgaacc gaagccacgc cgccgacaat gcaggcaaat gccaataccg
     8521 ccacgcccgg cataacggca cggacatttt caaaccaatg ttttccgtgc agcaggatat
     8581 ttgccgccga acccagcacc accggcaaaa gcgtgaccag cagcataaac cggaacatcc
     8641 cccaaccgtc catatccacc gtctgaccga ccaggcaggt catccacaaa ggcgtaacgg
     8701 ccggagccag caccgtagac accgtcgtca taccgactga aaacgccaca tcgcctttgg
     8761 caaggaaact cataatgttg gacgacacgc cgcccggaca cgtccccacc aacaccagcc
     8821 ccaaagtcag ccccggcgaa aggtcgaaca gcttggcaat accgatggcg agcaacggca
     8881 tcacggtata ttgcgccgcc gcaccgataa acacatccaa aggacgctgc gccaaaatcc
     8941 ggtagtcctc cctgcccaaa gtcatcccca tacccagcat aatgatgccc agcaccaaga
     9001 cctgaacatc gcccttaacc cacgcaaacg aagccggtcc gataaacgca accgccgacg
     9061 caagcaaaat gaccaaagcc gtaaaccgcg tcaggttgcg gctcaaacca atcagaaaac
     9121 ccatcacaca cccctcccga aacggcgcac cttgcgccgg acattattac cgcccgtgca
     9181 aaaccgaccg acggccactc atcgtccccg ccccatttta ctaaccggaa ttaacagata
     9241 cagcacaaat attaacccga accgcaaacg cccatcaagc cctttctgac ggcatcggca
     9301 ggcataccgt tggctatatc caaagaatca ggaattattt agcccgaatc atccggttt
//
LOCUS       DBBZYD010000080         9300 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.080, whole genome shotgun sequence.
ACCESSION   DBBZYD010000080 DBBZYD010000000
VERSION     DBBZYD010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9300
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.080"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(91..1371)
                     /locus_tag="ACJJDL_001615"
     CDS             complement(91..1371)
                     /locus_tag="ACJJDL_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HGG7574296.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            complement(1593..2213)
                     /gene="tmk"
                     /locus_tag="ACJJDL_001616"
     CDS             complement(1593..2213)
                     /gene="tmk"
                     /locus_tag="ACJJDL_001616"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HGG7574297.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="ACJJDL_001617"
     CDS             complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="ACJJDL_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HGG7574298.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            3352..3924
                     /gene="ampD"
                     /locus_tag="ACJJDL_001618"
     CDS             3352..3924
                     /gene="ampD"
                     /locus_tag="ACJJDL_001618"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HGG7574299.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            4118..5404
                     /locus_tag="ACJJDL_001619"
     CDS             4118..5404
                     /locus_tag="ACJJDL_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HGG7574300.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKLQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            5552..8077
                     /gene="ligA"
                     /locus_tag="ACJJDL_001620"
     CDS             5552..8077
                     /gene="ligA"
                     /locus_tag="ACJJDL_001620"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HGG7574301.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHICRLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARRQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTVVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAEA
                     PAANQTQSVPLYKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPSEG
                     SSVGASGKHKKQPTKWAENILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPA
                     AQYAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKSLPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            8134..>9300
                     /gene="hemW"
                     /locus_tag="ACJJDL_001621"
     CDS             8134..>9300
                     /gene="hemW"
                     /locus_tag="ACJJDL_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HGG7574302.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALEGAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQC"
BASE COUNT         2180 a         2806 c         2348 g         1966 t
ORIGIN      
        1 ttgtcctgat ttttgttaat ccactatatc aatctgacag caaaatgccg cctgaaaaca
       61 gttcagacgg cattttaaac cgcaaacggc ttacagcttc cattcgctca gcttggcagc
      121 gtaagcttcc aaatctgcaa tcggacgggt tgccacgccg ctttccatcg ctgctttggc
      181 ggcagccgta gcaacgcgcg gcagcaggcg ggaatcgaac ggagtcggaa tcaggtattc
      241 cgcgccgaat tcaaatttct taccgtaagc ggcaaccact tcttcggtta cttcttccat
      301 cgccaaatcc gccaaagcat acacgcaggc gcgtttcatt tcttcgttga tggtcgtcgc
      361 gccgacatcc aacgcaccgc ggaagatgaa cgggaagcac aatacattgt tcacttggtt
      421 cgggaagtcg gagcggccgg taccgataac cacgtccgga cgggtttctt tcgccagcgg
      481 cggcaggatt tccggattcg ggttggccat ggcgaacacg atgggttttt cgttcatcgt
      541 gttcaacatt tcgggggtca gcaggttcgc gccggagagg cccaagaaga tgtctttacc
      601 tttgacggca tcggcaagta cgcgctggcc attgtcttca acggcgtaga attttttgga
      661 ttcgtccatg cggtctttgt cttcgcgggt ttggtaaatc acgcctttgg agtcgcaaac
      721 ggtcacgttt tcgcgtttca agcccaaatc cagcaattgg ttcaagcagg caatcgcggc
      781 cgcacctgcg ccggaacaca ccaaagtcgc ttcttcgatt ttacggccgg taaaacgcag
      841 ggcgttcaat acggcggcgg cggtaatgat ggccgtgccg tgctggtcgt cgtggaatac
      901 ggggattttg cagcgtttgc gtaattcgcg ttcgatgtag aaacactcgg gtgctttgat
      961 gtcttcgagg ttgatgccgc cgaaggtcgg ctctaaagcg gcgatgatgt ccacgagttt
     1021 ttgcgggtct ttttcatcga tttcgatgtc gaacacgtcc acaccggcga attttttgaa
     1081 caatacgcct ttaccttcca tcacgggttt gcccgccagc gcgccgatgt cgcccaagcc
     1141 caaaacggcc gtaccgttgg aaatgacggc gaccaagttg cctttggcgg tgtatttgta
     1201 ggcattttgc ggatcggcat ggatttccat acaaggagcg gctacgcccg gagagtacgc
     1261 caacgccaaa tctttgtcgg tcgccaaaga tttggtcggg gtaacggaaa ttttgcccgg
     1321 aacgggtaat tcgtggaact tgagggcggc ttctttcaat gagttttcca tgtgtcaatc
     1381 ctgttgcgag aaaaagattt gaatcggact gtccgaaacg ctttcgggtc atcatgttac
     1441 gggcggttcg ttaatattgc cgacgcatcc tgccttgtaa ccgagcgtaa ttctatcatg
     1501 ccgaaagttt ggcgcatacc gccattttca cctgcggcac tgccgtttga ttttcggcgc
     1561 gggtggatgc gcttgtttca atatttgccg cattaacagc cgaaatgtcc gtccaacact
     1621 ttttctatgt tgtttctgac ttcatccaag ctgcggttac tgtcgataat ggcgtaccgt
     1681 tcgggacagg cggcggcacg gttcagataa acgctgcgca cacgcatgaa gaaatctgcc
     1741 tgttcctgct cgaaccggtc tttctcgcgc gactgtccga tacgcgccat cgacacttcc
     1801 agcggcacat ccaacagcag ggtcaaatcg gggcgcaaac cgccctgcac ccaatgttcc
     1861 aaaatttcaa tgtcttcaga cggcatcccc cgcccgccgc cctgataggc gaaggttgcg
     1921 tcggtaaaac ggtcggacac gacatggatg ccgtctgaaa gtgcaggcaa tatcacgtct
     1981 tcaatatgct gcattctggc ggcgaacatc atcagtgttt ccgcacgcaa accggctttg
     2041 gtttcagggt tgagcaggat ttcgcgcaag gcctcaccga ccggcgttcc gcccggttcg
     2101 cgcgtgaaca gcacgggcag ccccctccgt tcaaaccatg ccttgatgac ggcaaggttg
     2161 gtggatttgc cggcaccgtc tatgccgtcc aaagtgatga attgcggttt catgcttgca
     2221 gttccggtaa gggtatgccg tccgaaaaca caaacttttc agacggcatg gtttattttt
     2281 tcaaaatata tttgcgaacg gcggcgttgt gttcggtcaa atcatggctg aactggctca
     2341 agcccgtacc gtccattttg gacacgaaat acaggtattt ttcaccggac ggatgggcgg
     2401 cggcatcgag tgccgccttg ccgggcagcg cgatcggggt tggcggcaga ccgccgcgcg
     2461 tgtaggtgtt gtacggcgtg tcgcggcgca ggtcggcttt acggattttg cccttgtatg
     2521 ccgcacccat gccgtaaatc acggacgggt cggtttgcag gcgcataccg attttcaggc
     2581 ggttgacgaa gacggaagcg acatggtcgc ggtcggcttc atgccctgtt tccttttcga
     2641 tcaggctcgc cataatcagc atttcataag ggtttttata aggcagcccg tcctgcctgc
     2701 tttcccatgc ctcattcagt cggcgttgca tcgccttgta ggcgatttgg taaatccgta
     2761 aatcgctgcc gcccgcatcg atttcgtagc tgtcggggaa aaactgccct tcaggattgc
     2821 cgctgaaggc atcaggggca acttccgcca tcagtttttc attgctccag cctttggtgt
     2881 cgtgttcgat gtcgggcgtt gcgtcgatga ctttcctcat atgcgaaaaa cgcgaacctt
     2941 cgataatctg cacggtaacg gaatccggcc tgccgccgcg cattttctgc aagatatccc
     3001 aagcagacac ttccgaaggc agtctgtacg tccccgtatg cagcctgttg tgcacaccca
     3061 aaacgtaggc cgccgccgtc aaaacatgcc tgctgaacac gatgcggtct tcggcaagtt
     3121 tcctgccgac cgacgaaata ccctggtttt tggcaatttt aatcctgtat gccctgccgt
     3181 tgtctttagg gacgaaaagc agcgcggcga aaacggctgc cgatacggtc aaaaaaacgg
     3241 cagaccattt caacaatttt ctcaacatgg taggattccc agcattcgga atacgtctta
     3301 aaattcgggc gacagtataa cccaaattgc ccgccggaca ggaagaacat catggacaat
     3361 cacgccgaag cacactggca aaacggctgg cttcaaagca tacgccatac cccgtcgccc
     3421 aatttcagcc cgagggaaac gggggaaacg gtttccctga tcgtgttgca caacatttcg
     3481 ctgccgccgt tcgaatatgg tacggatgcg gtggaaaagc tgtttgccaa ccggctcgac
     3541 cccgacggac atccgttctt cagcctgata cacactttgc gcgtatccag ccatttttta
     3601 atcaaacgcg acggcgaaac ggtacagttc gtttcctgcg acaatatggc ataccatgcc
     3661 ggcgtatcct cgtttcgcgg acgggaaaaa tgcaacgcat tttccatcgg catcgaactg
     3721 gaaggctgcg atttcgaacc ctttaccgaa gcgcaatacc gttcgctcga agccttgttg
     3781 gacgcaatct gccgccgcta ccccatcacg gcggtaacgg ggcaccaaga catcgcgccc
     3841 ggccgcaaaa ccgaccccgg tcattttttc gactggcggc ggatacgggg gaaagggttt
     3901 cccgtggaca gaaatgccgt ctgaaaacca cagattttag acggcatttc ggaaaatttc
     3961 cgcttatttc gacacactgc tgtcagaccc tgcaattttc gttataattc aaacgttata
     4021 accggccgtt ccatcagact gccggaaacg caagcccgat ttaaccgcag tacccgcact
     4081 tcgcgcatcc tgcatcccga aatttaaagt gattgccatg atttacatcg tactgttcct
     4141 cgccgccgtc ctcgccgttg tcgcctacaa tatgtatcag gaaaaccaat accgcaaaaa
     4201 agtgcgcgac cagttcggac actccgacaa agatgccctg ctcaacagca aaaccagcca
     4261 tgtccgcgac ggcaaaccgt ccggcgggtc agtcatgatg ccgaaacccc aaccggcggt
     4321 caaaaaaacg gcaaaactcc aagaccctgc tatgcgcaac ctgcaagaac aggatgccgt
     4381 ctacatcgcc aagcagaaac aggcaaaagc ctccccgttc aaaaccgaaa tcgaaaccgc
     4441 cttggaagaa agcggcatta tcggcaactc cgcccacacc gtttccgaac cccaaaccgg
     4501 acattccgca ccgaaacctg ccgacgcgcc ggcaaaacct gcacccgttc cgcaaacacc
     4561 tgcaaaaccg ctgattacgc tcaaagaact gtcaaaagtc gaattaccct ggtttgacgt
     4621 gcgcttcgac ttcatctcct atatcgcgct gaccgaagcc aaagaactgc acgcactgcc
     4681 acgcctttcc aaccgctgcc gctaccagat tgtcggctgc accatggacg accatttcca
     4741 gattgccgaa cccatcccgg gcatccgcta tcaggcattt atcgtgggta ttcaggcagt
     4801 cagccgcaac ggacttgcct cgcaggaaga actctccgca ttcaaccgcc aggtggacgc
     4861 attcgcacaa agcatgggcg gtcagacgct gcacaccgac cttgccgcct ttatcgaagt
     4921 ggcttccgca ctggacgcat tctgcgcgcg cgtcgaccag accatcgcca tccatttggt
     4981 ttccccgacc agcatcagcg gcgtagaact gcgttccgcc gtaacgggcg tgggtttcgt
     5041 tttggaagac gacggcgcgt tccactatac cgacacgtcg ggctcgacca tgttctccat
     5101 ctgctcgctc aacaacgagc cgtttaccaa cgcccttttg gacaaccagt cctacaaagg
     5161 cttcagtatg ctgctcgaca tcccgcactc tccggcaggc gaaaaaacct tcgacgattt
     5221 gtttatggat ttggcggtac gcctgtccgg ccagttgaac ctgaatctgg tcaacgacaa
     5281 aatggaagaa gtttcgaccc aatggctcaa agacgtgcgc acttatgtat tggcgcgtca
     5341 gtccgagatg ctcaaagtcg gtatcgaacc gggcggcaaa accgcattgc gcctgttctc
     5401 ctaaaatcga atgcaatcaa agcggatatg tcgttacggc atatccgctt tttttcgggt
     5461 aaaattcagc tgttttcaac ctatcatttt tcagacgacc tttgcccgtt tcatcccgta
     5521 tcagacaaag gtcgtctgaa aaccttctct catgaatcca aactcaaaac ataacactaa
     5581 ctttaccaat cttcttaaac cgtctgatag tgatataaaa caatttgccg cacaacacat
     5641 ctgccgcctc accgacctcc tcaaccgcta cgcctacgaa tactacaccc tcgacgcgcc
     5701 cagcgtaccc gatgccgaat acgacaaatt gttccgcgaa ctcgaagcgt tggagttaaa
     5761 ccatcccgag ctcaaactgc ccgacagccc gacccagcgc gtcggcggcg agcctttggc
     5821 gggatttgcc gaagtacgcc acgaagtgcc gatgctgtcg ctgaccaacg ctttttcccc
     5881 gcaagatgaa aacggcgtgt tcgaccatgc cgaaatgtac gccttcgacc aacgcgtgcg
     5941 cgacggcttg gacggcggca atcccgaata cgttatcgaa cccaaattcg acggcctcgc
     6001 catcagcctg ctctaccgcg acggcgtatt ggtgcaggcg gcaacgcgcg gcgacggcac
     6061 gacgggcgaa gacgttaccc aaaacatcaa aaccgtatcc aacatcccct tgcggctgca
     6121 cggcgaaaat acgcccgaac tcatcgaagt acgcggcgaa gtactgatgc aaaaagccga
     6181 ttttgccgcc ctcaataaaa gacaagccga aaacgggcaa aaaccctttg ccaatccgcg
     6241 caacgccgcc gccggcagcc tacgccaact cgattcgcgc atcactgcgc aacgcaaact
     6301 gcactttttc ccctactccg tcgcccgccg gcaaggcggt ttcgtcgcgg aagaacacat
     6361 ccaagaactc gcctatttcc aagcactcgg cttcagtctg cccaatggca atttcggctg
     6421 tttcaaaaat atcgacgaag tattggcgtt ttacgaacac atgcagcaaa aacgccccga
     6481 actgccctac gaaatcgacg gcatggtggt taaagtcaac agcctggcgc aacagcgcga
     6541 actcggcttc atctcccgcg cgccgcgctg ggcgattgcc cacaagttcc ctgccgaaga
     6601 agccctgacc gtcgtcgaag cgattgacgt gcaaatcggc aggacgggcg cggtaacgcc
     6661 ggttgcccga ttacaacccg tattcgtcgg cggcgtaacc gttaccaacg ccaccctgca
     6721 caatcaggac gaagtttccc gaaaagacgt gcgcgtcggc gataccgtcg tcgtgcgccg
     6781 cgccggagac gtgattcccg aagtcgtgcg tgtgattttt gaacgccgcc cgatgcagga
     6841 aaccgccgtt gctgtttcag acggcatcgg gcatcggcag gacgatttgt ttgccgaagc
     6901 accggctgca aaccaaaccc aatccgttcc gctctacaag ccctaccgcc tgccgaccca
     6961 ttgccccatc tgccgcagcg aaatcgaacg cgaagaaggc gaagccgtcg cccgatgcag
     7021 cggcggtatg ctttgtcagg cacaacgcgc gcaaggctta atccacttcg cctcgcgcaa
     7081 agccatggac atcgacggct tgggtgaaaa acaaatcgaa cagcttgtcg cccaagacct
     7141 cgtccgccac ttcgccgacc tctaccgcct cgatattccg accctgcaaa aaatgaagga
     7201 aacggcggac aaaaccgttg ccgaatcgga tcaaatgccg tctgaaggca gttcggtcgg
     7261 tgcgtcgggc aaacataaaa aacaaccgac caagtgggcg gaaaacatcc tcgcaggcat
     7321 agaatccggc aaaacgcccg aactcgcgcg cttcctgttc gcgctcggca tccgccacgt
     7381 cggcgaacgc accgccaaaa cgctggcaca ggcattcggc acattggaac gcgtccgccg
     7441 cgcccccgaa cccgtcctcg cctgcctgcc cgacatcggt acggtagtgg cgcgttccat
     7501 tgcccacttc ttcgcccaag ccgaacagca ggcgatgata gacgagctgc tcgccgcagg
     7561 cgttgccccg caagcccaag ccgtcagcct gcctgccgca caatatgccg aaccgcaacg
     7621 ctggattgcc cgcctgcccg gtttcaaaat tagcgaaaac aaagcccaag ccttatggga
     7681 actcgccggc aaaagtatag agggtctgca aaccgacaaa tccctccccg ccgactggca
     7741 agcatggcgc agcgaaccac aaaacgccgc cctactcgaa aacctgaaaa ccttcttcgc
     7801 gcaaatgccg tctgaagacg aggcggcgca aggttcagac ggcatcaata aagccgtagc
     7861 gggcaaaacc ttcgtgttaa ctggcacact gcccaccctc aaacgcgacc aagcccaatc
     7921 cctaatcgaa gccgcaggcg gcaaagtttc cggcagcgtg tccaaaaaaa ccgattacgt
     7981 cgtcgccgga gaagccgcgg gcagcaagct ggaaaaagcc aatgccttgg gcgtttccgt
     8041 cctcagcgaa gccgaactgc ttaccctgct cggctgaacc catgccgtct gaaccgcctt
     8101 cagacggcat tgcccacttt tccgaaccac accatgcaca ccatttcctt tccaaaccgc
     8161 acccgactca ccgccctgcc gcccctgtcg ctttacatcc acatcccgtg gtgcatcaaa
     8221 aaatgcccgt attgcgactt caattcccac agcctgaaaa acggattgcc cgaagccgcc
     8281 tatatcgacg cgctgctgac cgatttgcag cttgaattgc ccaatatttg gggcaggccg
     8341 gtggaaacga tctttttcgg cggcggtacg cccagcctgt ttcaggcgga atcgattgac
     8401 cgtttgttaa gcggcgtgcg ttcgctgttg cgcttgcagc cggaagcgga aattaccttg
     8461 gaagccaatc cggggacatt tgaaatcgag aagtttcaag gatttaaaga cgcgggtatt
     8521 acgcggcttt ctatcggcgt acagagtttc aacgacgata tgctctcaag gctggggcgc
     8581 gtccacaacg gtaaggaagc cttaaccgct atcgataccg ccttgaaatt atttgataaa
     8641 gtcaatatcg acttgatgta tgccctgccg aaccaaaccg ttcagacggc attggacgac
     8701 gtacaaaccg ctatcgctac gggcgcgacc cacatcagcg cgtatcatct gacgatggaa
     8761 ccgaacacgc cgttcggtca tacgccgccg aaaggtttgc cgcaagacga agccgccctc
     8821 gacatcgaag acgcggtaca cggcgcgctg gaaggcgcgg gttttgtcca ctacgaaaca
     8881 tcggcttttg cgaaaccagc catgcagtgc cgccacaatt tgaactactg gcagttcggc
     8941 gattatttag gcataggcgc gggcgcgcac ggcaaaattt cctatcccga ccgcatcgag
     9001 cgcaccgtcc gccgccgcca ccccaacgac tacctcgcct taatgcaaag ccaaccgagt
     9061 gaagccgtcg aacgcaaaac cgtcgctgcc gaagatttgc cgttcgaatt catgatgaac
     9121 gccctgcgcc tgaccgacgg cgtacccgcc gcgatgttgc aggagcgcac gggcgtaccg
     9181 agtgccaaaa tcatggcgca aatcgaaacg gcaaggcaaa aaggcctgct ggaaaccgac
     9241 cctgccgtat tccgcccgac cgaaaaagga cgcttgtttt taaacgattt gctgcagtgt
//
LOCUS       DBBZYD010000081         9245 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.081, whole genome shotgun sequence.
ACCESSION   DBBZYD010000081 DBBZYD010000000
VERSION     DBBZYD010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9245
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.081"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..276
                     /locus_tag="ACJJDL_001622"
     CDS             <1..276
                     /locus_tag="ACJJDL_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7574303.1"
                     /translation="VDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
                     NHSKEFADRQNHINGIENFWNQSKRVLRKYSGLTKIRTRRRSRRQYK"
     gene            374..490
                     /locus_tag="ACJJDL_001623"
                     /pseudo
     CDS             374..490
                     /locus_tag="ACJJDL_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            703..2238
                     /locus_tag="ACJJDL_001624"
     CDS             703..2238
                     /locus_tag="ACJJDL_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG7574304.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLNIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     DEK"
     gene            2235..2327
                     /locus_tag="ACJJDL_001625"
     CDS             2235..2327
                     /locus_tag="ACJJDL_001625"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HGG7574305.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2387..3607)
                     /gene="lysA"
                     /locus_tag="ACJJDL_001626"
     CDS             complement(2387..3607)
                     /gene="lysA"
                     /locus_tag="ACJJDL_001626"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HGG7574306.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDTLVA
                     EGIVLEHLDLGGGVGIVYQDESVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKNIATLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVDGGGYRLIRRR
                     ETLEQQMANELACL"
     gene            complement(3618..3788)
                     /locus_tag="ACJJDL_001627"
     CDS             complement(3618..3788)
                     /locus_tag="ACJJDL_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HGG7574307.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            3859..4182
                     /gene="cyaY"
                     /locus_tag="ACJJDL_001628"
     CDS             3859..4182
                     /gene="cyaY"
                     /locus_tag="ACJJDL_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HGG7574308.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            4209..5225
                     /locus_tag="ACJJDL_001629"
     CDS             4209..5225
                     /locus_tag="ACJJDL_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HGG7574309.1"
                     /translation="MNTRPFYFGLIFIAIIAILANYLGNTDFSHHYHISALIIAILLG
                     MAIGNTIYPQFSTQVEKGVLFAKGALLRTGIVLYGFRLTFGDIADVGLNAVVTDAIML
                     ISTFFFTVLLGIRYLKMDKQLVYLTGAGCSICGAAAVMAAEPVTKAESHKVSVAIAVV
                     VIFGTLAIFTYPLFYTWSQHLINAHQFGIYVGSSVHEVAQVYAIGENIDPIVANTAVI
                     SKMIRVMMLAPFLLMLSWLLTRSNGVSENTSHKITIPWFAVLFIGVAIFNSFDLLPKE
                     LVKLFVEIDSFLLISSMAALGLTTQASAIKKAGLKPFVLGILTYLWLVIGGFLVNYGI
                     SKLI"
     gene            5251..5670
                     /locus_tag="ACJJDL_001630"
     CDS             5251..5670
                     /locus_tag="ACJJDL_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HGG7574310.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGDTGY
                     FYAASKDGILDALHIYNVEDVSDKHIPNHVLILWDDACTLAALCINDYIHAVYDFVAQ
                     AGYCRNGFPETGGEWVKVENRVLDDELLDKILSRKST"
     gene            5692..6219
                     /gene="luxS"
                     /locus_tag="ACJJDL_001631"
     CDS             5692..6219
                     /gene="luxS"
                     /locus_tag="ACJJDL_001631"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HGG7574311.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     TWLASMQDVLNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNAQSAKNAV"
     gene            6344..9160
                     /gene="polA"
                     /locus_tag="ACJJDL_001632"
     CDS             6344..9160
                     /gene="polA"
                     /locus_tag="ACJJDL_001632"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HGG7574312.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLSAPDGAPTGAMYGVLNM
                     LRRLRADYVHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLMG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSSETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHAELSDGIESLRRTTPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEMPFEKQAEKATAPEKLDYQA
                     VTTEAQFAALLDKLSRADTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QQAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPWDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGFVETLFGRRLYLPDIHNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLSECEASPWDELLQSKLIMQVHDELVLEVVETELDFVKEKLPQIMAK
                     VGGGLLDVPLVAEVGVGENWEEAH"
BASE COUNT         2218 a         2359 c         2404 g         2264 t
ORIGIN      
        1 gtggataatg ccaagtctga aacgttactc cctgtcatca aaaagaaaat catgccggac
       61 agtattgttt ataccgatag tctgagcagc tgcgacaagt tggacgtgag cggttttatc
      121 cattaccgca tcaaccattc caaggaattt gcagaccgtc agaaccacat taacggcatt
      181 gagaactttt ggaatcagtc aaaacgcgtc ttgcgaaaat atagtggatt aacaaaaatc
      241 aggacaaggc gacgaagccg cagacagtat aaatagtacg gaaccgattc acttggtgct
      301 tcagcacctt agagaatcgt tctctttgag ctaaggcgag acaacgctgt actggtttaa
      361 atttaatcca ctatacaacg gaatcgattg caaatctttc ccactgttct tgaaagaatg
      421 cgaatttcga tttaacttcg gcacaccgtc tcaacagctt aaaatcctgc gggattggtg
      481 tgggatttag ggctaatcta gtacagcccc taaaattttt cgttttcaaa ccttcaccgc
      541 ttgccatcag cgttaaattt ttttacgata agcacataga ttgtaaacaa tcggccacaa
      601 gccggtttgt tttttcagaa gacattatcc ctgtcagacg ctgtttctat atatttcgcc
      661 tataatggct tgtttttaat aaataattca agaggtatca acgtgtctga ttccaagacg
      721 aaagaacgcg ccacattcgg cacgcgccgc gcgtttatga ttgccgccat cgggtccgcc
      781 gtcggcttgg gcaatatttg gcgtttcccc tatattgctt ttgaaaacgg cggcggcgcg
      841 ttcatcctgc cctatctggt cgcgcttctg acggcgggca tcccgctgct gctgctcgat
      901 tatgccatcg gccaccgtta ccgtggttct gcgcccttgg ctttccgccg cctcggacga
      961 tggtttgagc cggtcggctg gtggaacgtg atgaccaata tcgtcatctg catctattac
     1021 gcggtaatta tcggttgggc ggcaagctat acctattatt cggtcaacgc cgcctggggt
     1081 gcggatccgc agggtttttt ctttaaggac ttcctgcaaa tggcgggccc ggaagccttg
     1141 ggtttggatt ttgtcggcaa agtcgccggt cctttggcgg gcgtgtgggt ttttaccgcc
     1201 gccattatgg cgttgggcgt gcaaaagggc gtggcgcgcg cctcgtcgtt ctttatgccg
     1261 ctgcttttgg tgatgttttt gattatggtc ggcatttcac taaccctgcc gggtgcggca
     1321 aagggcttgg acgcattgtt tacgcccgac tggtcgaaac tcgccgattc caaggtctgg
     1381 gtggcggcat acgggcagat tttcttttcg ctttccatct gcttcggcat tatggttacc
     1441 tattcttctt atttgaagaa aaaaaccgac ttgggcggaa cggggctggt ggtcggtttt
     1501 gccaacagca gctttgaact gctcgcgggc atcggcgtgt ttgccgcatt gggctttatg
     1561 gcgcaggcgg gcggtaaggc ggtcaacgag gttgcctcag gcggcatcgg tttggcgttt
     1621 atcgcctttc cgaccattat caaccaggca ccgatgggct ggctgatcgg catattgttt
     1681 ttcggttcgc tggtattcgc cggcgttacg tcgatgattt ccatccttga agtgattgtg
     1741 gcggcgattc aggacaagct gaacatcggg cgcgtcaacg ccacgctgct ggtctgcatt
     1801 ccgatgggca ttgtttccac gctgctgttc ggtacggcga cggggctgcc ggttttggac
     1861 gtgatggaca aattcgtcaa cacctacggc attgttgccg ccggctttgt ttatgttgcc
     1921 gccatcatca tcagcggcag gctgccggaa ttacgcaagc acctgaacgc cttgtcctcc
     1981 atccgcatcg gcggcttgtg gacggtctgc gtcgtggtta ccgtcgtgat gctcggctat
     2041 atgctgttta aagataccag cggcctgatg gagaaaaatt acgaaggtta tccggatggt
     2101 ttcctcaata ttttcggttg ggggatgtcg gcggcgttgg tcgtgttcgg gctgctgctg
     2161 tcgttgctgc cttggaaaca cggtcaggat ttcaacgtca aagacgaaca cgaacatgaa
     2221 caaggagacg aaaaatgagt acttccgcca ttgtgatgat gattgtctca atcgtgataa
     2281 tctggggagg gctgctgctt tccctgttaa ggctgccgaa cgagtaagcc tttagagcgt
     2341 taaaaatgcc gtctgaactg tttcagacgg cattttgatg ttcggcttac aggcaggcga
     2401 gttcgtttgc catttgctgt tccaaggttt cgcgccggcg gatgagtcgg tatccgccgc
     2461 cgtcaaccaa tacctccgcc gcacggttgc gcgcgttgta attgctcgcc atgctggcac
     2521 cgtatgcgcc cgcgctgcgg ataagcagca aatcgccttc ttcgcaggcg atggtgcggt
     2581 ctttgccgag gaagtcgccg gtttcacaaa tcgggccgac gatgttggcg gtcagcgtcg
     2641 cgatgttttt ggtttcgacc gcttcgatgt ggtggtaggc atcataaagt gccggacgca
     2701 ttaaatcgtt catcgccgca tcgaccatca caaagttttt ctcttcgccg tgtttgacga
     2761 attcaacgcg cgtcaataac gcacctgcgt taccgaccaa gctacgacct ggttcgagga
     2821 tgagtttcag acggcgtgtg ccgatcagtt tttgaaccgc ttgggcatat gcgcccaaat
     2881 cggggacgct ttcgtcttga taaacgatgc cgacaccgcc gcccaagtcc aaatgttcca
     2941 aaacaatgcc ttcggcgaca agagtgtcaa ccaaaatcaa aatgcgttcg caggcttcga
     3001 ccagcgggct taagtcggtt agttgggagc cgatgtggca gtcgatgccg atgattttca
     3061 aattgggctg ttgtgcggca tggcggtagg cttcgagcgc gtcggcgtag gcgataccga
     3121 atttgttggc tttcaaacct gtggagatgt aaggatgggt tttcgcatcg acatcgggat
     3181 tgacgcgcag ggagacgggc gcggttttac ccaaacgcgc ggcaactttc tgaatacggt
     3241 cgatttcggg gatgctttcc atattgaagc atttcacgcc tgcattcagc gcgaactcga
     3301 tttccgcctc gcttttgcct acgcctgaaa atatggtttt tgccgcgtcg ccgcctgccg
     3361 ccaaaacgcg tgccaattcg ccgccggaca caatgtcaaa accgctcccc aaagaagcaa
     3421 agtgtttgat gatgctcagg ttgccattgg ctttaaccgc atagcagacg agcggggaga
     3481 gctcggcaaa ggcagtttgg tagtgttcaa atgcttcggt cagcgcggat tggctgtaca
     3541 cataaagcgg tgtgccgaat gcttcggcaa ggcgggggta ggggacttgt tcgcaaaata
     3601 gggtcatatt ttcgttttca tttttgggtt ggaggggcgg attgcggttt gccttgaagc
     3661 tgcaaaccgg tttggattac gccgaaacgc gccttgtcgc cttctttggg caggtagagg
     3721 tcgcctttgt aaccgcaggc cgagagcagg agggcggttg ccgccgcaaa aaatacgccg
     3781 tatttcatcg gtaaacttcc ttcataagcg cgaatgtggc aagattcggc atcttaaaca
     3841 aaaaacacgc aaaaagctat gatgaccgaa agcgagttta tccgcgcgag cgaagcatta
     3901 tttgaacaca tcgaagacca aatcgacgaa aacggctggg atttcgactg ccggtttgcc
     3961 ggaaacgtcc tgaccatcga agccggagac ggcacgcaaa tcatcgtcaa ccgccacacg
     4021 cccaaccaag aattgtggat tgccgcaaaa agcggcggct accatttcgc cgaacaaaac
     4081 ggcaaatggc tggcaacacg cgacagccgc gatttctacg acgttttaaa cgaagcactg
     4141 agcgcggctt cgggcgaagc ggtagagatt gaggaattgt gatttgggtg ttatcacgga
     4201 gagaaaaaat gaacacacgt cccttttatt tcggacttat atttatcgcg attatcgcta
     4261 tacttgctaa ctatttagga aacactgatt tttcccatca ttatcatatc agtgctttaa
     4321 ttattgctat cttgctggga atggcaatcg gcaataccat ttatccgcaa ttttcaacac
     4381 aagtggaaaa aggcgttttg tttgccaaag gcgcgcttct tcgcactggc attgtgctgt
     4441 atggtttccg cctcactttt ggcgatattg ccgatgtagg attaaatgct gtcgttaccg
     4501 atgcaatcat gctaatttca accttctttt ttaccgtact tttaggcatt cgttatctaa
     4561 aaatggataa acaattggtt tatctcactg gggcaggttg cagcatttgc ggtgcggcag
     4621 cagtgatggc ggcagagcct gttaccaaag cagaatccca taaagtttca gtggcgattg
     4681 ccgtagtggt cattttcggg acgcttgcta tttttactta ccccttgttc tacacgtggt
     4741 cacaacattt aattaacgcc catcaattcg gtatttatgt tggttctagt gtacacgaag
     4801 tggctcaagt ttatgcgatt ggggaaaata ttgatcctat cgtggcgaat actgccgtca
     4861 tttccaaaat gatccgagtg atgatgctcg cccccttttt attaatgctt tcttggttat
     4921 taacacgtag taatggagta tcagaaaata catcacacaa aattacaatt ccttggtttg
     4981 ctgtactttt tattggtgtt gccattttta attcttttga tttattacca aaagaactcg
     5041 tgaaattatt cgttgaaatc gattctttct tattaatttc atcaatggct gcgcttggct
     5101 taacgacgca agcaagcgca atcaaaaagg caggattaaa accgtttgtt ttaggaatac
     5161 taacttattt atggctagtg attggtggat ttttagtgaa ctatggaata tcaaaattaa
     5221 tataaaattc actaaagaga gcgttaccca atggcacaat taccgctata tcggactgcc
     5281 gaaatcggaa attttactgt cggcacgcct aaagttttag aatcattttc caaacatatc
     5341 ccttatggcg tcgtctttga agacgacggc gacacaggtt acttttatgc cgcctcgaaa
     5401 gatgggattt tggatgcttt gcatatctac aatgtcgaag atgtatccga caaacatatc
     5461 cccaatcatg tcttgatctt atgggacgat gcctgcactt tggcagcttt gtgcatcaac
     5521 gactacatcc atgccgtcta tgattttgtc gcgcaggcag gatattgccg caacggcttc
     5581 cctgaaacag gcggcgaatg ggtgaaagtc gaaaaccgcg tcttggacga tgaattgctg
     5641 gacaaaatct tatcccgaaa atctacataa cctactcaaa aggataacaa aatgcccctg
     5701 ttagacagtt tcaaagtcga ccacacccgt atgcacgccc ctgccgtacg cgtggcgaaa
     5761 accatgacca cgcccaaagg cgataccatt accgtattcg acctgcgctt ttgcgttcct
     5821 aacaaagaaa tcctgcctga aaaaggcata cacacgctgg agcatttgtt cgcaggcttt
     5881 atgcgcgacc acttgaacgg caacggcgtg gaaatcatcg acatttcccc gatgggctgc
     5941 cgcaccggtt tctacatgag ccttatcggc acgccttccg aacagcaggt cgccgatacg
     6001 tggctggctt cgatgcagga tgttttgaat gtcaaagacc aaagcaaaat ccccgagttg
     6061 aacgaatacc aatgcggcac ttatcaaatg cactcgctcg ccgaagcgca gcaaatcgcg
     6121 caaaacgtgt tggcgcgcaa agtggcggtg aacaaaaatg aagagttgac gctggatgaa
     6181 gggctgctga acgcccaatc cgccaaaaat gccgtctgaa caagggtttc agacggcatt
     6241 tgccttttcc gttataatcc ggggttgtgc gggggcgggt tttaagccgg catcgtcctt
     6301 ccctattttt ttctgtccct tatcggtttt aagcgggttt tttatgtcca acagacctac
     6361 actcctcctc gttgacggct cttcctatct ctaccgcgcg tatcacgcga tggggcagaa
     6421 tttgtctgcg cctgacggtg cgccgacggg ggcgatgtat ggcgtgttga acatgctgcg
     6481 tcggttgcgg gcggattatg tgcatgatta ttgcgcggtg gtttttgatg cgaaaggcaa
     6541 aaatttccgc catcaaatgt ttgaagaata caaggcgacg cgcccgccaa tgccggacga
     6601 tttgcgtcct caagcggaag ccttgccgga tttggtgcgg ttgatgggct ggccggtatt
     6661 ggtgattggg caggtggagg cggacgatgt gatcggcacg ctggcgaaac agggggcgga
     6721 acatggtttg cgagtcattg tttcgaccgg cgataaggac atggcgcagt tggtggatga
     6781 gcgcgttacg ctggtgaaca cgatgagcag cgaaacgctg gacattgaag gcgtgaaggc
     6841 aaaattcggc gtgcgccccg accaaatccg cgattatctc gcgctgatgg gcgacaaggt
     6901 ggacaacgtg ccgggcgtgg aaaaatgcgg cccgaaaacg gcggtgaagt ggctggaagc
     6961 ctacggctcg ttgcaaggcg tgatagaaca cgcttcggaa atcaagggca aagtgggcga
     7021 aaacctgcaa gccgcgctgc cccaactgcc gctgtcgtat gatttggtca cgattaaaac
     7081 cgatgtggac ttgcacgccg agctttcaga cggcatcgaa agcctgcgcc gtactacgcc
     7141 gaaatgggcg cagctggttg tcgatttcaa acgctggggc ttccgcacct ggctgaaaga
     7201 agcggaatca aacatgaata ccggctcgac cgatgatttg ttcggcagcg acagcatcgg
     7261 cgagcaggcg gctttgaatg cggaaatgcc gtttgaaaaa caagccgaaa aagccaccgc
     7321 ccccgaaaaa ctggattatc aagccgttac caccgaagcg cagtttgccg ctttgttgga
     7381 caaactgtcg cgggcggaca caatcggcat cgatacggaa accacgtcat tagacgcgat
     7441 gaacgcctcg ctggtcggca tcagcatcgc tttccaagca ggcgaagcgg tttacatccc
     7501 cgtaggacac agcctgaccg ccgcgcccga acagcttgat ttgcaagacg tattaggccg
     7561 tctgaaaccg catttggaaa accccgccct gaagaaaatc gggcaaaacc tcaaatacga
     7621 ccaacacgtt ttcgctaact acggcatcgc cctgaacggc attgccggcg acgctatgct
     7681 cgcttcctac atcatcgaaa gccatcttgg acacggcttg gacgaattgt ccgaacgttg
     7741 gctgggcttg gaaaccatta cctacgaatc attgtgcggt aaaggcgcga agcaaatcag
     7801 ttttgccgat gtcgccatcg ggcaggcgac cgaatacgcc gcccaagacg ccgatttcgc
     7861 cttgcgcctc gaagcgcacc tgcgcgcgca aatggacgcc aaacagcttg aaatgtatga
     7921 aaaaatggag ctgcccgtcg cgcaagtatt gtttgaaatg gaacgcaacg gtgtgcaaat
     7981 cgaccgcgcc gaactcgccc gccaaagcgc ggaactcggc gccgagctga tgaagctcga
     8041 acaacaagcc tacgccgccg caggccagcc gttcaacctc aattcgccca aacagctgca
     8101 agaaatcctg ttcgacaaaa tgggcatccc gacaaaaggg ctgaaaaaaa ctgccaaagg
     8161 cggcatttcc accaacgaag ccgtgctcga acagctcgcg cccgactacc ccctgcccaa
     8221 aatcatcctg caaaaccgca gcctggcgaa actcaaatcc acctacaccg acaaactgcc
     8281 cgaaatgatt tctccctggg ataaccgcgt gcataccacc tacgcccaag ccgtcgccat
     8341 tacaggacgc ttggcaagca acaaccccaa cctgcaaaac atccccatcc gcaccgccga
     8401 aggccgccgc gtacgtcgcg cctttaccgc accgcaaggc agcgtcatcg tttccgccga
     8461 ctattcccaa atcgagctgc gcatcatggc gcacctctct ggcgacaaaa ccctcatcgc
     8521 tgcgttccaa aacggcgaag acgtacaccg ccgcaccgcc gccgaagtgt tcggcatcgc
     8581 ccccgaaaac gtctcgtccg aacaacgccg ctacgccaaa accatcaact tcggcctcat
     8641 ttacggcatg ggccaatacg gcctcgccaa atcattgggc atcgacaaca tctccgccaa
     8701 aaactttatc gaccgctact tcgcccgcta tcccggcgtc gccgaataca tgcagcgcac
     8761 caaagaacaa gccgccgcac aaggctttgt cgaaaccctg ttcggcagaa ggctctacct
     8821 gcccgacatc cacaacaaaa acgccaacgc ccgcgccgga gccgaacgcg ccgccatcaa
     8881 cgcccccatg caaggcaccg cctccgacct catcaaacgc gccatgatag acgtgtcccg
     8941 ctggctttca gagtgcgaag cctccccgtg ggacgaactc ttacaaagca aactgattat
     9001 gcaggtgcat gacgaactgg tgctggaagt cgttgaaacc gaactggatt ttgtcaaaga
     9061 aaaactgccg cagattatgg cgaaagtggg cggcggatta ttggatgtac cgctggtggc
     9121 tgaggttggc gtaggggaga attgggaaga ggcacattga ttgaaaggtg ttatatgcta
     9181 tctttattta aataaaattt aatttttggt atattttttc taaatgttcc tatagtatag
     9241 tggat
//
LOCUS       DBBZYD010000082         9120 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.082, whole genome shotgun sequence.
ACCESSION   DBBZYD010000082 DBBZYD010000000
VERSION     DBBZYD010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9120
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.082"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..1938
                     /locus_tag="ACJJDL_001633"
     CDS             <1..1938
                     /locus_tag="ACJJDL_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HGG7574313.1"
                     /translation="ISPEIFGTLFQSVMDAQERREAGAHYTETANIDKVINGLFLENL
                     RAEFEAVKALKRDKDKKLAAFYQKIQNLQFLDPACGCGNFLIVAYDRIRALEDDIIAE
                     ALKDKTGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDGEV
                     ACHTLPLEDAAEIIHANSLRTPWQAADYIFGNPPFIGSTYQTKEQKNDLESICGHIKG
                     YGLLDYVCNWYVKAAGIMAQHPQVQTAFVSTNSICQGQQVEILWGSLLKQDIEIHFAH
                     RTFQWTSQAAGKAAVHCIIVGFRQKPQMPSEKTLYDYPDIKGEPVKHAAANINPYLID
                     APDVIIAKRSRPVHCEPDMVNGSKPTEGGNLILSTDEKEALIAAEPLAEQYIRPFVGA
                     EEFINGKTRWCLWFHGVSDVKRNHDLKQMPQVQARIQAVKTMREASSDKQTQKDAATP
                     WLFQKIRQPSDGNFLIIPRVSSESRRFVPIGYLSYETVVSDLVFTLPNASLYHFGILS
                     STMHNAFMRTVAGRLESRYRYSNTVVYNNFPFPESCRMPSENDRQDPLRAAVETAAQA
                     VLDARGQYRREAREAGLPEPTLAELYAPDAGYTALDKAHAALDKAVDKAYGYKTGKNT
                     DDEAERTAFLFELYRKAAAIA"
     gene            complement(2751..3434)
                     /locus_tag="ACJJDL_001634"
     CDS             complement(2751..3434)
                     /locus_tag="ACJJDL_001634"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HGG7574314.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVIPDGENLQVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            3730..6033
                     /gene="parC"
                     /locus_tag="ACJJDL_001635"
     CDS             3730..6033
                     /gene="parC"
                     /locus_tag="ACJJDL_001635"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HGG7574315.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKTDLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLSDENEKRKLIVKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTI
                     LPVVILDSSGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATNQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRIPI
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            6053..7629
                     /locus_tag="ACJJDL_001636"
                     /pseudo
     CDS             6053..7629
                     /locus_tag="ACJJDL_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237220.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
     gene            7622..8089
                     /locus_tag="ACJJDL_001637"
     CDS             7622..8089
                     /locus_tag="ACJJDL_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7574316.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            8193..8945
                     /locus_tag="ACJJDL_001638"
     CDS             8193..8945
                     /locus_tag="ACJJDL_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7574317.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         2266 a         2855 c         2196 g         1803 t
ORIGIN      
        1 atcagtcccg aaatcttcgg cacgctcttc caatcagtca tggacgcaca agagcggcgc
       61 gaagcgggcg cacactacac cgaaaccgcc aacatcgaca aagtcatcaa cggccttttt
      121 ttagaaaacc tgcgcgccga atttgaagcc gtcaaagccc tcaaacgcga caaagacaaa
      181 aaactcgccg ccttctacca aaaaatccaa aacctgcaat tcctcgaccc ggcctgcggc
      241 tgcggcaact tccttatcgt cgcctacgac cgtatccgcg ccctcgaaga cgacatcatc
      301 gccgaagcgc tcaaagacaa aacaggcggc ttattcgaca gcccgtccgt ccaatgccgt
      361 ctgaaacagt ttcacggcat cgaaatagac gaatttgccg tcctcatcgc ccgcaccgcc
      421 atgtggctca aaaaccacca atgcaacatc cgcacgcaaa tccgcttcga cggcgaagtc
      481 gcctgccata cgctgccgct cgaagacgcc gccgaaatca tccacgccaa cagcctccgc
      541 acaccttggc aggcggcgga ctacatcttc ggcaatccgc cctttatcgg ctcgacctac
      601 caaaccaaag agcagaaaaa cgacctcgaa agcatctgcg gccatatcaa aggctacggc
      661 ctgttggatt acgtctgcaa ctggtatgtc aaagccgccg gtatcatggc gcagcatccc
      721 caagttcaga cggcatttgt ttccaccaat tccatctgcc aaggccagca ggtcgaaatc
      781 ctttggggca gccttttgaa gcaagacatc gaaatccact ttgcccaccg cacctttcaa
      841 tggacgagcc aagccgcagg caaagccgcc gtccactgca tcatcgtcgg cttccgccaa
      901 aagccgcaaa tgccgtctga aaaaaccctc tacgactatc ccgacatcaa aggcgaaccc
      961 gtaaaacacg ccgcggccaa catcaatccg tatctgattg acgcgcccga tgtgattatt
     1021 gccaagcgca gccgtcccgt acattgcgaa cctgacatgg tcaacggaag caaaccgacc
     1081 gaaggcggca accttatcct ttcaaccgat gaaaaagaag ccctgattgc cgccgaaccc
     1141 ttggcggaac aatacatccg tccctttgtc ggcgcagagg aatttatcaa cggcaaaacc
     1201 cgttggtgcc tgtggtttca cggcgtatcc gacgttaaac gcaaccacga cctgaaacag
     1261 atgccccaag ttcaagcccg tattcaggca gtcaaaacca tgcgcgaagc cagcagcgac
     1321 aaacaaactc aaaaagatgc agcaaccccg tggctttttc aaaaaatccg ccagccttca
     1381 gacggcaatt ttctgattat cccacgcgtc tcatccgaaa gccgccgttt cgtccccatc
     1441 ggttatctat catatgaaac agttgtcagc gatttggtat ttacccttcc aaacgccagc
     1501 ctctaccact tcggcatcct cagctccacc atgcacaacg cctttatgcg taccgttgcc
     1561 ggccgtctgg aaagtcgtta ccgctattcc aataccgttg tgtacaacaa cttccccttc
     1621 cccgaaagct gccggatgcc gtctgaaaac gaccgccaag acccgctccg cgccgccgtc
     1681 gaaaccgccg cccaagccgt cctcgacgcg cgcggacaat accgccgaga agcgcgggaa
     1741 gccggtttgc ccgagccgac cctcgccgaa ctctatgcgc ccgacgcagg ctataccgcc
     1801 ctagacaaag cccacgccgc cctcgacaag gcagtcgata aagcctacgg ctacaaaaca
     1861 ggcaaaaaca ccgacgacga agccgaacgc accgccttcc tgttcgagct gtaccgcaag
     1921 gcggcggcaa ttgcgtagta gttgcgtagt agttgcgtag tagttgcgta ggatagttgc
     1981 gtagggtggg cttcagccca ccaactccca ccaactccca ccatcttcac cctaaaaccc
     2041 cgtcatctcc gcaaaagcaa ttgcgtaggg tgggcttcag cccaccgttt ttcttcattt
     2101 tcggttgttg attggcaggc tgaagcccac cctgcggtta caaaaatccc gtcattcccg
     2161 cgcaggcggg aatccagacc tttcggggcg gaaacttatc ggataaaacg atttcccctg
     2221 catcctggat tcccactttc atgggaatga cgggatatag gtttccctac ggacgtgttc
     2281 agattcccgc cttcgcggga atgacggcgg agaagtttct gtctttccga taacttaccg
     2341 taacttaaaa tcccgtcatt accgcaaaag cagttgctac ggttacaaaa atcccgtcat
     2401 ccccacgaaa gcgaaaatcc tgcctgtcgg atttcggttt tttcgggcgt ttcgggaact
     2461 tataaatcgt cattcccgcg caggcgggaa tccagaacgc gggacggcgg caatattcaa
     2521 aggttgtctg aaaattcaga ggttctagat tcccgcctgc gcgggaatga cggcggagcg
     2581 gtttctgctt ttccgataaa tgaccgcaac ctaaaaccca tccttcccac gaaaacagaa
     2641 aaacaaaaac ctaaaatccc gtcgttctcg cgaaagcagt tgctacgttt accgtcaaaa
     2701 atgccgtctg aacgctcaag ccttcagacg gcatttttta tttcacaccc ttacaggtag
     2761 aatttttcga tgactttcaa attgtcgtcc aatttgtaca ccaacggctg accggtcggg
     2821 atttccaagc ccatgatgtc ttcgtcggaa atgccctcga tgtgttttgc cagcgcgcgc
     2881 agggagttgc cgtgcgccgc caccaagacg cgtttgccgc tcaaaatcgc gggggcgatt
     2941 tggtcttccc aaaacggcaa tacgcgctcc agcgttactt gcaggttttc gccgtcgggg
     3001 ataacatcgg caggcagatg ggcatagcgg cggtctttgt gtgcggaaaa ctcatcgtct
     3061 ttgtccaaaa gcggcggcag ggtgtcgtag ctgcgccgcc agatgcggac ttgctcgtcg
     3121 ccgtattgtt cggcggtttg ttttttgtcc aggccttgca gtcggccgta gtggcgttcg
     3181 ttcagccgcc atgttttgat ttgcggtacg aacagttggt cggattcttc caaaacgatg
     3241 ttgcaggtct taatcgcgcg ggtcaggacg gatgtgaagg cgatgtcgaa ctcatagccg
     3301 ttttctttca gttttttacc ggcggcagca gcctcggcaa gcccctgctc gctcagcttc
     3361 acgtcgcgcc agcctgtaaa caggtttttc gcgttccatt cgctttgtcc gtggcggata
     3421 aataccaatt ccatatcgtc tccaatgtgt gaaagtggga aagccttatt tataacatat
     3481 tttcacattc ccgtatttga ttcagattca gacacgcgcc cactatggtt tgccgttttg
     3541 atttacaata atgccctttg ctttacattc cgcatacaca atgtttcaac acacaggacg
     3601 acacataaag caccgcccta tgtgttgccc tgatttggaa ggggttgccc cctcccaaat
     3661 aaagtctgat tctaccgccc cgaaggacag atgtccaagt ggcgggggtt caaccgaaaa
     3721 ggaaatacga taaatatgca accgcacgct ccacataccg attccaatac gctgatgctc
     3781 ggccgatacg ccgaacgcgc ctatctcgaa tacgccatga gcgtggtcaa aggccgcgcg
     3841 ctgcctgaag tttcagacgg ccaaaagccc gttcagcggc gcattttgtt tgccatgcgc
     3901 gatatgggtt tgacggcggg ggcgaagccg gtgaaatcgg cgcgcgtggt cggcgagatt
     3961 ttgggtaaat accacccgca cggcgacagt tccgcctatg aggcgatggt gcggatggcg
     4021 caggatttta ccttgcgcta tcccttaatc gacggcatcg gcaacttcgg ttcgcgcgac
     4081 ggcgacggtg cggcggcgat gcgttacacc gaagctcggc tgacgccgat tgcggaattg
     4141 ctgttgtccg aaatcaatca gggaacggtg gatttcgtgc cgaactacga cggcgcgttt
     4201 gacgagccgc tgcacctgcc cgcccgcctg cctatggtgt tgctcaacgg cgcgtcaggc
     4261 atcgcggtgg gcatggcgac cgagattccg tcgcacaatt tgaacgaagt gacgcaggca
     4321 gcgattgcgc tgttgaagaa gccgacgctg gaaaccgccg acctgatgca atatattcct
     4381 gcgcccgatt ttgccggcgg cggtcaaatc atcacgccgg cggacgaatt gcgccggatt
     4441 tacgaaaccg gcaaaggcag cgtgcgcgtg cgtgcgcgtt atgaaatcga gaagctggcg
     4501 cgcggacagt ggcgcgtcat cgtaaccgag ctgccgccga acgccaattc cgccaaaatc
     4561 cttgccgaaa tcgaagaaca aaccaacccg aaaccgaaag cgggtaagaa acagctcaac
     4621 caagaccagc tcaacaccaa aaagctgatg ctggatttaa tcgaccgcgt gcgcgacgag
     4681 tccgacggcg aacatcccgt gcgactggtg ttcgaaccga aatccagccg catcgatacc
     4741 gataccttca tcaacacgct gatggcgcaa acttcgctgg aaggcaatgt gtccatgaac
     4801 ttggtgatga tggggctgga caaccgcccc gcgcagaaaa acctgaaaac gattttgcag
     4861 gaatggctgg atttccgcac cgtaaccgta acacgccgtc tgaaattccg tttgaaccaa
     4921 gtggaaaaac ggctgcacat cctcgaaggc cgtctgaaag tctttctgca catcgacgaa
     4981 gtgattaaag tcatccgcga atcagatgac ccgaaaaccg atttgatggc ggcgttcggg
     5041 ctgaccgaaa tccaagccga agacattttg gaaatccgcc tgcgtcagtt ggcgcgtttg
     5101 gaaggtttca aactcgaaaa agaattgaac gaattgcgcg aagaacaagg ccgtctgaac
     5161 atccttttga gcgacgaaaa cgaaaaacgc aagctgattg tcaaagagat gcaggcggac
     5221 atgaaacagt tcggcgacgc gcgccgcacg ctggtggaag aagccggacg cgccgtgctg
     5281 acacaaacca ccgccgacga acccatcaca ctgattctgt cggaaaaagg ctggatacgc
     5341 agccgcgccg gacacaatct cgatttgagc caaaccgcgt tcaaagaagg cgaccgcctc
     5401 aaacaaaccc tcgaaggcag aacgatttta cccgtcgtca ttctcgattc atcgggcaga
     5461 acctacaccc ttgatgccgc cgaaatcccc ggcgggcgcg gcgacggcgt gccggtttca
     5521 tccttgatcg agctgcaaaa cggcgcgaaa cccgttgcga tgttgacagg attgccggaa
     5581 caacattatt tattatcaag cagcggcggc tacggcttca tcgccaaact gggcgatatg
     5641 gtcgggcgcg tgaaagcggg caaagtggtg atgaccgcag acagcggcga aaccgttttg
     5701 ccgccggttg ccgtctatgc ctcctcgttc atcaaccccg actgcaaaat cattgccgcc
     5761 accaatcaaa accgcgccct cgccttcccc atcggcgaat tgaaaattat ggcgaaaggc
     5821 aaagggctgc aaatcatcgg attaaacgcc ggcgaatcga tgacgcatac cgccgtttct
     5881 tccgagccgg aaatcctgat tgaaagcgaa ggcaggcgcg gcgcagcgca caaagaccgc
     5941 atccccatct ccctgcttga ggcaaaacgc ggcaaaaaag gcaaactatt acccatatcg
     6001 ggcagcctga aacagctttc ttccccgaaa taaacccgac tctgcacata ctatggtaat
     6061 ttccaatacc cgcgaacttg agaaactcaa agaccggatt cccaatctga tcaacatcgc
     6121 ccgcatcgcc atcgtcttcc ccctgctgat tatgcatatc ttcgggttgg aggtcagcgg
     6181 acatgaaaac ctgcacgctt cgtggacggc gtgggcattt tatgtttggc tcgccatttc
     6241 ctgctggctg attttctttt ccatcatcca tccgcattgg caatggcagt cgctgaaaat
     6301 gccgcgtttc agcgcggtgg cggacatcac gatgatcggc gtgctgacct acctgttcgg
     6361 cggcatcgat tccggcttcg gcatcctgat tctgcccttc gtcgtctgct cctgcctgct
     6421 cagctacggg cgttaccccc tgctctatgc cagctacgcc gccatcctgc tgatattcaa
     6481 cgccattgcc gacggcgata tcggcaaata tccgcacata tcggatgccc gaaccgcctc
     6541 ggcaaccttc atcctcgtcg ccgcctccta tctttccgcc atcttcacct cactgtcggt
     6601 cagatacatc gacagcgccg gcaaacttgc ccatgaaaac cacgccgcct accgccgcat
     6661 caggggcttg aaccaaatcg tactcaaccg cgttcaggaa gcggtcgtcg tcatcaacgt
     6721 cgagcatcag accatactgt tcaataaaaa ggcaaaagat ctgctcccca tgcttgaaat
     6781 cggacagcat accgccctat tcgaccctat taccgtttta tgggacaagg cctcttcgcg
     6841 tactttcgaa cgcaatatcg acacgcccgc cctgaccgcc cgcatccgcg ccgtgccgat
     6901 gaacaaagag caaaacaaac tgctcatcct ctacatccgc ccgcaaagcg aaattcaggc
     6961 agaagccctg tccgtcaaac ttgccgcact cggacaactg accgccaacc tcacccacga
     7021 aatccgcaac ccgatgtccg ccatccgcca cgccaacggc ctgctgcgcg aaaatatgga
     7081 agcgggggcg gcagatccgt tcaacgccaa attgtgcaaa atcatcgacg gcaacgtctg
     7141 ccgtatcaac aaaatgctcg aagatatttc ctcgctcaac aagcgcaaca aaaccgaacg
     7201 cgaagccatc ggcctgatac cgttttggga agaattcaaa caagagttcc tgctcggcca
     7261 tcccgatgcc gccggctgca tccgcctaga tatgcagggc aatcacctga ccgcctattt
     7321 cgatcccgcc cacctgcggc aaattatgtg gaacctcgcc aacaacgcgt ggcggcacag
     7381 ccgcaaacag cccggctcga tttccgtcac catccgcccc gcgcaaaaaa acaccgtctg
     7441 tatcctcttt gccgaccgcc cgaagtgcag gaacacctgt tcgaaccctt ttacaccacg
     7501 gcggaaaacg gcaccggcct cgggctgtat gtcgcccgcg aactggcgca cgccaatttc
     7561 ggcgatttga cctacctacc ggaagccaaa tgtttcgaac tcacattacc ggaaaaaacc
     7621 aatgactgaa ctgcaacacc ccgtcctcgt cgtcgatgac gaaaccgaca ttctcgacct
     7681 gatggaaatg accctgatga aaatgggctt gcgcgtccat accgcgtcag gcgttgccga
     7741 agccaaaaac aagctcgaca gccaacgcta ttcgctcgtc ctgaccgata tgcgtatgcc
     7801 ggacggctcg gggctggaag tcgtccaaca catcaacagc cgcctgctcg atacgccggt
     7861 tgccgtcatc accgccttcg gcaacgccga tcaggcacag gaagcgttgc gttgcggcgc
     7921 gttcgacccc gataccatgc agatacagga ctatctcgac caaatcgaac gcgacattat
     7981 cgaacaaacc ctcaaacaaa ccgaaggcaa ccgcacgcag gccgccaaac gcttgggcat
     8041 cagcttccgt tccatgcgct accgtatgga acgcctcaac atcggctgac gacaaaacgg
     8101 catccgcacc atctccgccc acccgaaaaa atgccgtctg aaacggcacg ggaaagcggg
     8161 ttcgccccac gcccgaacgg acacaaaaca ccatgaccga catccttatt gacaacaccg
     8221 ccaccgaaac cgtccgcacc ctgatacggg cattccccct tgtgcccgtt tcccaaccgc
     8281 ccgaacaagg cagttacctc cttgccgaac acgataccgt cagcctcagg cttgtcgggg
     8341 aaaaaagcag cgtcatcgtc gattttgcct ccggcgcggc acaataccgg cgcacaaaag
     8401 gcgggggcga actcatcgcc aaagccgtca accacaccgc gcaccccacc gtttgggacg
     8461 caaccgcagg attggggcgc gacagcttcg tcctcgcctc gctcgggctg gccgttaccg
     8521 ccttcgagca acatcccgcc gtcgcctgcc tgctttcaga cggcatccgc cgcgccctcc
     8581 tcaatcccga aacgcaagac accgccgcgc gcatcaccct gcatttcggc aacgccgcag
     8641 tacaaatgcc cgcacttgtt caaacacaag gcaaacccga catcgtctat ctcgacccca
     8701 tgtatcccga acgccgcaaa agtgccgccg tcaaaaaaga aatgacctac ttccaccggc
     8761 tcgtcggtga agcgcaagat gaggccgccc tcctccatac cgcacgccaa acggcaaaaa
     8821 aacgcgtcgt cgtcaaacgc ccccgcctcg gcgaacacct tgccggacaa gcccctgcct
     8881 accaatacac cggcaaaagc acccgcttcg acgtttacct gccctacggg acggacaagg
     8941 gataacgccc ataaaacaag acaccgaaaa atttgccgtt cttatgcaaa cgagaaaccg
     9001 gtttttgcgt ttcgactgtt ttggataaat catcacacct taaagtttgt cattcccacg
     9061 gaagtgggaa tccagaaatg aaaagcaaca ggaatttatc gtaaatgacc gaaaccgaac
//
LOCUS       DBBZYD010000083         9103 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.083, whole genome shotgun sequence.
ACCESSION   DBBZYD010000083 DBBZYD010000000
VERSION     DBBZYD010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9103
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.083"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(60..1316)
                     /locus_tag="ACJJDL_001639"
     CDS             complement(60..1316)
                     /locus_tag="ACJJDL_001639"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HGG7574318.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLFDEEETAFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWREEEILAFGRSINQPAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLAGLKIDL
                     DTGKYLRLNSARHQTDGFFAAVLQRK"
     gene            complement(1664..2005)
                     /locus_tag="ACJJDL_001640"
     CDS             complement(1664..2005)
                     /locus_tag="ACJJDL_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574319.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2208..3065)
                     /locus_tag="ACJJDL_001641"
     CDS             complement(2208..3065)
                     /locus_tag="ACJJDL_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HGG7574320.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFTNAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPQGFHAFEPPLNPYGWRDVYIQD
                     WAEYGFERQEVRYHLLDRMAYLAPARAAETETLNETEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3126..3941)
                     /locus_tag="ACJJDL_001642"
     CDS             complement(3126..3941)
                     /locus_tag="ACJJDL_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HGG7574321.1"
                     /translation="MTTLKPALPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            4005..4175
                     /locus_tag="ACJJDL_001643"
     CDS             4005..4175
                     /locus_tag="ACJJDL_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574322.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCTSEPAVCHP"
     gene            4185..4970
                     /locus_tag="ACJJDL_001644"
     CDS             4185..4970
                     /locus_tag="ACJJDL_001644"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG7574323.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDVVAANPKVLAQMLKIISAHV"
     gene            5240..7335
                     /locus_tag="ACJJDL_001645"
                     /pseudo
     CDS             5240..7335
                     /locus_tag="ACJJDL_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            7459..9009
                     /locus_tag="ACJJDL_001646"
     CDS             7459..9009
                     /locus_tag="ACJJDL_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HGG7574324.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLITAVKGKASGLFTHNPVLNIKTFRFTLPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEARASIAD
                     INETLRLMVDSTVQSMAREKYLTLDGNQIDTVISLKNNALKLNGKTLQNEPDPDFDEG
                     GMVSEPQQ"
BASE COUNT         2283 a         2159 c         2409 g         2252 t
ORIGIN      
        1 gatgaaatgc cgtctgaacg ctttgaaaag ggttcagacg gcattttgtt taaacagggt
       61 tatttgcgtt gcaatacggc ggcgaagaag ccgtcggttt ggtgtcgggc ggagttgagg
      121 cgcaggtatt tgccggtatc caaatcgatt ttcaaaccgg caagcagttc ggcgcagttg
      181 acgggttcaa attcgggatg ttcggacagg aaacgttcga cttgcagctc gttttcttcg
      241 ggcaggatgc tgcaagtggc gtaaaccaag cggccttgcg gttttaccag tttggaggcg
      301 gcatcgagga tgctgtgttg ctgttccaaa aggttggcca cggtttcggc ggattggcgg
      361 tatttgaggt cgggattgcg gcgtaaagta cccaaaccgg agcagggcgc gtccaccaac
      421 acacggtcgg ctttgcctgc cagtcgggcg atacggctgt cgtgttcgct gctgatgcgt
      481 tcggggtgga tattggtcag tccggcgcgg gtcatacgcg gtttgaggtt ggcaaggcgt
      541 ttttcggcga tgtcgaaggc gtagattctg cctttattgg ccatttgcgc accgacagcc
      601 aaggttttgc cgccggcacc ggcacagaaa tcgacaatga tttcgccgcg ttttgcgccc
      661 accaataaag caagcagctg gctgccttcg tcttggactt ccagtgtgcc gtctaaaaac
      721 agttcgtgtt tgttaagcgc gattttgttt ttcaggcgga tgccccaagg cgaataaggc
      781 gttgcctctg catcggcact ttcggcttgc aacagcggca gcactttatc gcgtttgcct
      841 ttcaaagtgt tgacgcggat gtcgagcggg gcaggctggt tgatgctgcg gccgaaggcg
      901 aggatttctt cttcacgcca atgctgttgc agttgttcga ccagccattg cggcaattct
      961 gcggcggtat tcaggccgtc tgaaaactcg gttttacggg ctttcaaatt gccgaggaac
     1021 gctgtttctt cttcatcaaa caggtctttg atttggctga tgttggtgct tctgccgaga
     1081 accagtgcgg cgagtgcggc tttgcgcggc tgtgcgtgcg gacggcgcag ggcagtgctg
     1141 attttttgat agtggcgcag cgcggcaaag gcggtttcgg cgatttcgtg gcggtcttgg
     1201 cggccgagct ttttatgttc gcggaaatag gcggagagga cggcatcggc aggctgtttg
     1261 aaagtcagca tttcagccaa aactttggcg gtatggtcga gttgtgcggc gttcataatg
     1321 taatgggttc tcttactgtg ggttattcat aatcaatcta acgtccttaa aataacaata
     1381 gcatctttat cattacttag tattctatcc gcaataagaa agatgtgtta aaagtgcgca
     1441 atcgggattt gtctaaattt ctccgttaac tacaaaggca gcctgaaaaa agttctattt
     1501 tcaggtcgct tgaacagcat ccgatataat cacatcagcg atttcatttt gtaatcactc
     1561 cccaaaacat gaggaaaaaa acaaaattta ttttcttcgt tcagtatatc tatcctaaat
     1621 atgccatcac tccattgagt ttttaatttg tatttcgctc ttgttaaatg tttttctgtt
     1681 tgccgatttc ttttgctaat gtaaaaaata ctctaccact ctcattggtt aaagttttca
     1741 agtattcatc aacatcagta acattaataa caactgtttc atttgtatgt ttattaaatt
     1801 ctaaatcaat aataatattc ccattaacca atatttcata tatatcttct tcttcaggga
     1861 gcatagacaa acaataagca cttgaagctg aaaactcttt tttcagatac tgaagaagaa
     1921 aagtattttt aattaaaata ttattaaatt tatctaatga ttgcttgact tctttagttg
     1981 tccaattttt aacattattc ttcattgtat tctacctggg tcgtagttat taaattacca
     2041 tacttatttg tttggatcgt cataatatta gttggcatgt tgttgttata tttatcatat
     2101 ccaatatcct tattaactcg gatgactctt tcataaattg tatgggaaat gagatttcca
     2161 tcactaagcc tctcaataga tatacgcgtt aatgttggga aagggtttca gacggccttc
     2221 ataatgcgtt cgatttcgtg ccaaaagccg tccggccgac attccaaaac ggcaatcaag
     2281 ccttggtcga tacggcggat ttcggtttcg ttcaatgttt cggtttcggc ggcacgcgca
     2341 ggtgcgaggt aggccatgcg gtcgagcaga tggtagcgga cttcttggcg ttcaaacccg
     2401 tattccgccc aatcttgaat atagacgtcg cgccagccgt atggattaag cggcggctca
     2461 aaagcatgga aaccttgcgg aaaaaatccg atgccgcgca cgatggaaac gggttttacg
     2521 tcaagcggca gaccgtgttg ccgcaaggtt cggatgccgt ctgaagtgtg cggcagaccg
     2581 agttgggcgg tcagtttggc ggcttttccc aacagcgtgt ctttggggtc gagtccgcgc
     2641 atgtcttcga gcctgcccgt gccgccgccg taatatttgc aggtcagctc gatatggtag
     2701 ggcttgccgt taagccttac cacaaaatcc gccgcgcctt gcgtattgcc gtccgaaccg
     2761 gaaaccgtga ggttgtgcgc gagcagttcg gcgtgtggcg cgttggtaaa ccaaaatgcc
     2821 agcagttctt cggcgtaaat gccgaggcgg tgtccgaacg gggcgcgtcg ggtgaggtgt
     2881 tccgtcagcg gcgcgggatc ggcatccaat gccaaaagat agcggaaacc gcgttccccc
     2941 aatagttcgc gcacgcccaa ttcgcaaccg ctttgccaca aaggcggcgc agtcagcagc
     3001 gaggcgaggt cgcggacggg ttggctggtg agcttccacc ataatgcgtc tagggcgtaa
     3061 ttcatgctta tccgaatatc agtcatgccg tctgaaaagc tggaaatgtt ttcagacggc
     3121 cttaatcagt cttttttatg gatacgatgg ctgacggtat tgaaaaaacc gcgcaggata
     3181 tcgatgtctt cggtttgcgt gttggcgcgt ccgaacaggc tctgcatacg gcgcatcaga
     3241 cgctcgccgt tgcggcggtt gaaaaagccg atgtcgttca tcacgctttc catgtgggcg
     3301 accatgcctt tgatttgctc gtgggtcgca gcgtggtctt cttgttgaag atgggtcatg
     3361 ggcgaaccgg tttggctgaa gatttcgtag cacacgacct gcacggcttg ggcgaggttg
     3421 agcgagaaat agtcgggatt gccgttgatg gtcatcagtc ggttgcaggc ttggacttct
     3481 tcgatgctca agccgaaagt ctcgttgccg aaaaccagtg ccactttctc gcctcggttt
     3541 gcggtctgca gtaattcgga taccaaatcg cgcggggttt gcagcggcgc agtaatttcg
     3601 cggcggcggc tggtcagggc gcaggcgatg gtggtgtcgg caagggcttc gtccaaagaa
     3661 gcggcaatgg tggcattttc caaaacgtct gccgcgccgg aagcgaggat gaagctttct
     3721 tccggtaatt taaacgattg aggatgctcc gggtcaaaca cgggcgggtt ttccgtcatc
     3781 ggcgttgcca tcagatttgg ggcgacgatg gtcagtttgt gcagacccat tgttttcatc
     3841 gcgcgcgcgg cagagccgat gttggcggga tggctggtgc gcgtgaggat aatgcggatg
     3901 ttgccgagat agtcgggcag ggcgggtttg agagtagtca tgttcggttt tcggtcggaa
     3961 tggaataggg tataatgcgc cgtctttttc gttcggacgg tcaaatgccg tctgaaatgt
     4021 tctttaacaa cgtcggaaat ttaacgttgc gcctgaagca gacacgcgtc gggcggtatt
     4081 ttacccgatt tggcaggatt taccccaacc aaataaactc cgattttgcc gctccgaagg
     4141 actgcacgtc cgaaccggcg gtatgccacc cttaaggaaa tctgatgaat ccgtttttga
     4201 atacagcctt taaagccgcc cgccgtgccg gtcagatgat gatacgcgcc gcgggcaatc
     4261 tcgatgccgt caaaaccgac agcaaagcat tcaacgattt tgtttccgat gttgaccgca
     4321 attccgaaat catcctggtt gaggctttga aagaagccta tccgcaccac aaaatcactt
     4381 gcgaagaaag cggctcccac ggtaaagccg cagccgaata cgaatggatt atcgatccgc
     4441 tcgacggcac gaccaacttc cttcacggcc atccccaata cgccatctct atggcactcc
     4501 tgcacaaagg cgtgttgcaa gaagctttgg tgtacgcccc cgaacgcaac gacgtttaca
     4561 tggcttcgcg cggcaaaggc gcgttgctca atgaccgccg catccgcgtt tccaaccgca
     4621 tcgaattgaa ccgctgcctg atcggtaccg gctttcctgt tgtcgatcaa agcatgatgg
     4681 acaagtatct ggcgattttg aaagatttct tggcaaaaac cgccggcggc cgtcgtgaag
     4741 gcgcggcttc tttggatttg tgtgctgtgg cgactggtcg ttttgacggc tttttcgagt
     4801 tcaacctcaa accttgggat attgccgcag gcgcattgat tgttcaggaa gcgggcggta
     4861 tcgtaaccga tatgacgggt gaagacggct ggctggaaag cggcgatgtt gtcgctgcca
     4921 atcccaaagt actggcgcaa atgttgaaaa tcatttccgc acacgtttaa atttcagccc
     4981 gctcccggga atgcgggaaa acgggcgggt atgccgtctg aagtatcgcg ccgatatttc
     5041 agacggcatt tttactggca gcgggggcag gaaggtggaa acggctaaat gcccgaaact
     5101 gccgaagatg gaaacccata tctgattaaa cggagaaccc tgtacgattt gtttatagtg
     5161 gattaacaaa aaccagtacg gtgttgcctc gccttagctc aaagagaacg attctctaag
     5221 gtgctgaagc accaagtgaa tgggcaaagc caacgccttt accgcaccga ttaccgtcgt
     5281 caattacgac gaacaagccc tcaataacac cgaagcgcgt actttggtgg atgccgtagc
     5341 gaaaaaagac gcttccgttt ggcagttcgg cggcgaaagc aacacgctga ccggtctgta
     5401 tttcagaggt tatcagcttg actcgcgcca attcagcgtc aacggtttgg caggtatgta
     5461 cggcacgcaa ggcacggcca gcgtgcaagt cggctcggca caactgatta aaggcgcgtc
     5521 caccgccgta aacggcatgg accctgaagg cgcggtatcc ggttccgtca atattgaaac
     5581 caaaaaagcc gccgacgaag acaaccgcaa aatcggtttg ggctggttta gcaacaaccg
     5641 cgcccaaggt acgttcgact tgggtcaacg cttcggcgaa aacaaagaat tcggcgtgcg
     5701 cgccaacggc aaactgcgcc atggcgacac cccgcgccac ggttacagcg aagacaacaa
     5761 agaatttgca ttgaatgctg attatcgcgg cgaaaaagtg cgcgtggcgt tcgactccat
     5821 ctacgcgaaa cgcaaaacca acggcggccg cgcgcgtatg caggatattc aaaacgccgg
     5881 cggccgcttg tttgacgcgc cagacggcaa aatcaacctg ctgctttcgt ggaactggca
     5941 aaacaccgtc ggcgaaacca atatgctgac ctttgaatgg gatgcgtttg acaatgccca
     6001 aattaccggc ggtatcggct acaacaaggc gcgttattac ggcacactga tttccccgac
     6061 cgtttgcggt acaagcggtg cgagcgacca aaccgctacc tgcacaagtg ccaagcaata
     6121 ccacaccggc acggcgagcc tgaccgacca atatttccgc acattgagta tgaacctgac
     6181 cgcacgcggc gaatttgaaa ccggcccggt aacacataac tggagtatgg ctttcgaccg
     6241 cgttatccgc cagcggaaaa ccataaacgg cagcgggaac ggcaacagca agatagaagt
     6301 gaaggcaaac gaaaatattg cgaatcaatt ggcatcgttt acagccgact atcccaattc
     6361 ttgggagaac tctgccaatt tggatgccaa tatcaaagtc aacagcctgg ctttgtccga
     6421 caccttgggc ttcgtggata acaaataccg cctgactttg ggcggacgtt tccaaacagt
     6481 cgaatatacc gacaaaaaat cacagagcgg cgatgccaaa cgtttcagcc cgatgctgat
     6541 ggcggcgtgg gtgccgcaac ctgatttggt tgtgtacggc aactatatgg aagacttgga
     6601 gcctgccgac atcaaaaccg atgattccgg cgaaacgaca atggcgaaac cgcgtgtcag
     6661 ccgccagttt gaagtgggtg tgcgtaaaaa ctggggcaat ttcgtaacca cgttaaacgc
     6721 gttccaaatc aaacgcccgg ctactggcgc ggtcatacaa ctaccaagac aacaaaaggg
     6781 gtaacaacaa cgctgaccta tggcaacaat tccgatttcg cccgctataa ggcgcaaggc
     6841 ggcgtagccg gcgacgagca aggtatggaa cgcaatcgcg gtatcgagtt caatgcctat
     6901 gctaacctgt taaacaaaac cctgcgtccg actttgggcc tgatgtatct gcaatcgacc
     6961 gtgaaagact acccaaattc acgcgatatg ctggttaacg gcgtacaagt cgccaatccg
     7021 cgcgtaattg ccaaggcagg tttggaatgg gatacaccgt ttgccaaagg cttgacttta
     7081 aacagcaatg tttcgtattt cggcaagtct taccaagaca cgcaaaaaca atacgccttc
     7141 ccatcctata ccttggttga tgtaggcgcg cgctacaaaa ccaagctcgg caaaaatacg
     7201 ttgaccgtca gcagctcggt ggaaaatctg ttcaacaaaa actactggca ggtacagcgc
     7261 ggccaatacg accgcagctt cgccgtcgtc ggtctgccgc gtacttactg gctgaaggcg
     7321 gaattggatt tctgatttct ccgcatctgg aaaatgccgt ccgaacaggt ttcagacggc
     7381 atttctttta aagagatatg gcgggatacg cttaaataat gctattctag cgtctttgaa
     7441 acctgcttgt ttgaagtgat gaaaaaacct ttgatttcgg ttgcggcagc attgctcggc
     7501 gttgctttgg gcacgcctta ttatttgggt gtcaaagccg aagaaagctt gacgcagcag
     7561 caaaaaatat tgcaggaaac gggcttcttg accgtcgaat cgcaccaata tgagcgcggc
     7621 tggtttacct ctatggaaac gacggtcatc cgtctgaaac ccgagttgct gaataatgcc
     7681 cgaaaatacc tgccggataa cctgaaaaca gtgttggaac agccggttac gctggttaac
     7741 catatcacgc acggcccttt tgccggcgga tttggcacgc aggcgcacat tgaaaccgag
     7801 ttcaaatacg cgcctgaaac ggaaaaagtt ttggaacgct tttttgggaa acaagctccg
     7861 gtttcccttg ccaataccgt ttattttaac ggcagcggta aaatggaagt cagtgttccc
     7921 gccttcgatt atgaagagct gtcgggcatc aggctgcatt gggaaggatt gacgggaaaa
     7981 acggtttatc aaaaaggttt caaaagctac cgcaacagct atgatgcgcc cttgttcaaa
     8041 atcaagctgg cagacaaagg cgatgccgcg tttgaaaaag cgcatttcga ttcggaaact
     8101 tcagacggta tcaatccgct tgctttgggc agcagtaatc tgaccttgga aaaattctcc
     8161 ttagaatgga aagagggtgt cgattacaac gtcaaattga acgaactggt caatctcgtt
     8221 accgatttgc agattggcgc gtttatcaat cccaacggca gcatcgcacc ttccaaaatc
     8281 gaagtcggca aactggcttt ttcaaccaag accggggaat caggatcatt tatcaacagt
     8341 gaagggcagt tccgttttga cacactggtt tacggcgatg aaaaatatgg cccgctggat
     8401 atccatatcg ctgccgaaca tctcgatgct tctgccttaa ccgtattgaa acgcaagttt
     8461 gcacaaattt ctgccaaaaa aatgactgaa gaacaaatcc gcaatgattt gattactgca
     8521 gtcaaaggca aggcttccgg attatttacc cataacccgg tgctaaatat caaaactttc
     8581 cgtttcacgc tgccgtcggg aaaaatcgat gtgggcggaa aaatcatgtt taaagacatg
     8641 aagaaggaag atttgaacca attgggactg atgttgaaga aaaccgaggc agacatcaga
     8701 atgagtattc ctcaaaaaat gttggaagat ttggcggtaa gtcaggccgg aaatattttc
     8761 agtgtaaatg ccgaagatga ggcggaagcc agagcaagca ttgcagatat taatgaaaca
     8821 ttgcgcctga tggtggacag tacggttcaa agtatggcaa gggaaaaata tcttacttta
     8881 gacggtaatc agattgatac ggttatttcc cttaaaaaca acgccctgaa gttaaacggg
     8941 aaaacgctgc aaaatgaacc tgatcccgat tttgatgagg gcggtatggt ttcagagccg
     9001 cagcagtaat gggtcaaatg ccgtctgaaa tgttcaggcg gcattttgtt gtattggaaa
     9061 ctgccgtttt caaccattcc tttagataag ccgtgtcgga ttc
//
LOCUS       DBBZYD010000084         9076 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.084, whole genome shotgun sequence.
ACCESSION   DBBZYD010000084 DBBZYD010000000
VERSION     DBBZYD010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9076
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.084"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(76..669)
                     /gene="ribA"
                     /locus_tag="ACJJDL_001647"
     CDS             complement(76..669)
                     /gene="ribA"
                     /locus_tag="ACJJDL_001647"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HGG7574325.1"
                     /translation="MSELLNYVASCRLPTEWGVFTMHGFEEANGQEHVALTVGDFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(662..1336)
                     /locus_tag="ACJJDL_001648"
     CDS             complement(662..1336)
                     /locus_tag="ACJJDL_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574326.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMGMGTASIDRSV
                     LWRSDEGWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENQAFQ
                     LICLSQQGEGLENIWNLDENVADVSLACRCAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPICTESGGVLGVVHVEFECAECADEAAQAEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            1490..1574
                     /locus_tag="ACJJDL_001649"
     tRNA            1490..1574
                     /locus_tag="ACJJDL_001649"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1524..1526,aa:Leu,seq:tag)
     gene            2094..3128
                     /gene="purM"
                     /locus_tag="ACJJDL_001650"
     CDS             2094..3128
                     /gene="purM"
                     /locus_tag="ACJJDL_001650"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HGG7574327.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
     gene            complement(3602..4258)
                     /locus_tag="ACJJDL_001651"
     CDS             complement(3602..4258)
                     /locus_tag="ACJJDL_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7574328.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPMLE
                     "
     gene            complement(4255..6027)
                     /locus_tag="ACJJDL_001652"
     CDS             complement(4255..6027)
                     /locus_tag="ACJJDL_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HGG7574329.1"
                     /translation="MILPARFSDGISLSLRLKLLTGLWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRAQIDNQVAEFEKSLKRIAQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQPQQGTTVSLTGASEESLK"
     gene            6233..6847
                     /locus_tag="ACJJDL_001653"
     CDS             6233..6847
                     /locus_tag="ACJJDL_001653"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HGG7574330.1"
                     /translation="MKTSNFSKRTSAMKTFALILAGGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPDDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQTDLQEG"
     gene            7010..7627
                     /locus_tag="ACJJDL_001654"
     CDS             7010..7627
                     /locus_tag="ACJJDL_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HGG7574331.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFQTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKSNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            7635..8498
                     /locus_tag="ACJJDL_001655"
     CDS             7635..8498
                     /locus_tag="ACJJDL_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7574332.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYANKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(8511..8945)
                     /locus_tag="ACJJDL_001656"
     CDS             complement(8511..8945)
                     /locus_tag="ACJJDL_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HGG7574333.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPLNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
BASE COUNT         2229 a         2202 c         2451 g         2194 t
ORIGIN      
        1 cttattgctt tatcaaggta tggaaacctg tttcccgaaa ggcggcgcag gatgcccgtt
       61 ccctgcaact ttgccttatt ccgacatcag atgtcccagc ttgtctgctt tggtttggag
      121 gtagcgtttg ttttcaaggt tttccccgac gtgcaggggg atgcgttcga ccacgttaat
      181 ccccgcatct ttcagggttt ggattttttc ggggttgttg gtcagcagtt tgaccgagcg
      241 gatgcccaga tattcgtaga tagattgcgc caaacggaaa tcgcgggcat cgacgggcag
      301 cccgagtgcc aaattggctt caaccgtatc cataccttgg tcttgcagat gataggcgcg
      361 gattttgtta atcagcccga tgccgcgtcc ttcctgacgc agatagacga tgatgccgcg
      421 cccctctgtc tgtaccgccc tcatggccgc ttcaagttga ggtccgcagt cgcattttct
      481 cgagaacagc gcatcgcccg tcaggcattc ggagtggatg cgcgtcagaa ccggattgcc
      541 gtctgaaaaa tcaccgacgg tcagcgcgac gtgttcctgc ccgtttgcct cttcaaagcc
      601 gtgcatcgta aatacgcccc attcggtcgg caggcggcag gaagcaacat agtttaataa
      661 ttcagacatt ttcatctcct tctgcggcag tgatgcccaa aagctgcttc aaaggttcgg
      721 acaaagccaa ggcaagagcc acccattccg cctgcgctgc ctcatccgca cactctgcgc
      781 attcaaattc cacatgaacc acgcccaaca caccgccact ttccgtgcag attggaatgg
      841 aaatttgcgc cgccgaagca tgattgcgtt ctcccgaaag ctcccccaaa tccaaccaac
      901 ggcgtacatc cgaggcaaca ttcatccagc cgctttgcgc gcaacggcag gcaagtgaaa
      961 catcggcaac attttcatct agattccata tgttttccaa accttctccc tgttgggaca
     1021 ggcatatcag ttggaaagcc tggttttcag acggcatcaa ggcatagacc gccgcactcc
     1081 gcacgcctgt cgagcgcgaa aacaccgaat ccaaagccat gaaaagccgt ttcagtgcat
     1141 cttcgcggac attgtcgcac gacaggtaat cggcaagttt ccaaccctca tcactgcgcc
     1201 acaaaaccga acggtctatc gaagccgtcc ccatacccat taccgtctgc gccgtcagat
     1261 acgccgcccg aacctcgtca agcggcagct tcaaaccctg agtcagcaga aaatccttaa
     1321 tcaaagcagc aggcataccc aaattccgtc aataaaaaca aaaaaccgcc cgattccgat
     1381 gtcaggcgga cgaaaaacag attttaccgc cccaaacccc aagccatcaa cagccccgcc
     1441 gaaaaccttg cacaaaaaaa caaaatctgt ataatcgtcc aattcccatg cggacgtggc
     1501 gaaattggta gacgcaccag atttaggttc tggcgccgag aggtgtgaga gttcgagtct
     1561 ctccgtccgc accaataatg ataaataaat tatatagtta atgcttatcg ggacaaatta
     1621 gtgccacaaa acataagtcg tctgcttttc agcgggcggc ttttttatct gcctatatgt
     1681 ttcaacacgc agaacggtac ataaagtgcc gccatttgtt ccgcaccgaa tcggaaacgg
     1741 gtgcttccgc ccgcaatcag attcaccgcc cctaatgccg gggtttcaac cggaaagaag
     1801 aaaatattga ttttgatgat ggcatcaaaa aaccccttcc gctcgtctgc caaaaggaat
     1861 ggttaagaaa agcaatgcgt cttttgatgg aacgcgatat ataaggaatt gaggggaagg
     1921 gcaggcgggt ttctgcccgt taatcctgcg gacggtcccg ccaaacccga cacgcgcggg
     1981 tatatggcgg actgtttaca atattgtcta aaaatctgaa cctgcaaacg tgaaataagg
     2041 tagaatacgc cccgttattt taccgtccaa tccccattta ccaaggaaaa acgatgagta
     2101 cttcattgag ttaccgcgat gcaggtgtcg atatcgacgc aggcgaccaa ctggtcgaaa
     2161 acatcaaacc gtttgccaaa cgcaccatgc gtccggaagt attgggggat ttgggcggtt
     2221 ttggcgcatt ggtcgaaatc ggcaagaaat ataaaaatcc cgtattggtc agcggtacgg
     2281 acggcgtggg taccaagctc aaacttgcct tcgattggga taaacacgat acggtgggca
     2341 tcgaccttgt tgcaatgagt gtcaacgata ttttggttca aggagcagaa cctctgtttt
     2401 tcttggatta tttcgcctgc ggcaaattgg atgttccgcg cgcaaccgat gtcatcaaag
     2461 gcattgcaca aggttgcgaa gaatccggct gcgccctgat tggcggggaa actgccgaaa
     2521 tgccgggtat gtatcccgtc ggagaatacg atttggcggg ttttgccgtc ggcgtagtgg
     2581 aaaaagagaa tgtcattacc ggccgcagca tcggcgcggg cgatgtggta ttgggtttgg
     2641 cttccaacgg cgcacattca aacggctatt cccttatccg taaaatcatc gaacgcgaca
     2701 atcccgattt ggatgccgag tttgataatg gcaaaacctt gcgtgaggct gttattgcgc
     2761 cgacccgtct gtatgtgaaa ccgattcttg ccgctttgga aaaatttacc attaaaggta
     2821 tggcacacat taccggcggc ggcattaccg aaaacgtgcc gcgcgtgttg cctgaaaaca
     2881 cggttgcaca aatcgatgct aaatcgtggg aattgcccaa gctcttccaa tggcttcaaa
     2941 aggcgggcaa tgtggaaacc caagaaatgt accgaacctt taactgcggc atcggcatgg
     3001 tcgttattgt tgctgccgaa gatgccgatg cggttcaggg tctcttgggt gaacaaggtg
     3061 aaacagttta ccgtttaggt ttgatccgtg agcgtcaggg agacgagcat caaacccagg
     3121 ttgcctgatt gcttctatag cgaaatgccg tctcaaacat gggtttggac ggcattttta
     3181 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca gatagtacgg
     3241 caaggcgagg caacgccgta ctggtttttg ttaatccact atatattgat tgatatgagg
     3301 gtgggttaca catgcttaaa cgatataagc cattgtatat ttatgggatt cggaatggaa
     3361 cattttaccc tgcattagta tttccgcttt ttattatgcc gtctgaaaat atcatgatga
     3421 tgcgttttca gacggcatag ctgatattgc agtatcagat aggggcaaac ggaaaacact
     3481 gaaccgaaca atattactgc tatgccaagc gtacttatgg gggcataaac ttacatgctt
     3541 ggtctgttat ccgaatgacc gtacggggat taaaacccct aatatgccgt ctgaacccgc
     3601 cttattccag catgggttgg gggacgttgt gccggatggc gtaaacagcg gcctgcaccc
     3661 ggctgctgag gttgagtttg cggagcaggt tttgaacgtg gactttgacg gtggattcgg
     3721 caagatcgag gtggcgggcg atgattttgt tgctgtgccc tgcggcgaga tagcccaaga
     3781 tttccagttc gcgaggggta agtgaggaga gtgcctgtgt cccttgggca ggttgggggg
     3841 aaatcaggct tttaacgagt ttggcggtca tctcgggcga gaatacatta tcgccttcgg
     3901 cggctttgcg tatgctttcg agcagaaagt cagcgttgat gtttttcagc aggtaaccgc
     3961 gcgcgccgat gcgaatacat tcggtcaagt cgtcgctgtc ttcggaaacg gtcagcataa
     4021 tcactgcctg ctgcggattg atgctgatga tttgggagag tgcttcgcgt ccgttcatgc
     4081 cgggcatatc caaatcgagc aggacgacat cgggttgcag ccgactaatc attttgatgc
     4141 ccgagaggcc gtctgcggct tcgccgatga cttcaaaacc gtgttggcgc gacaaaaggg
     4201 ctttaatgcc gctgcggaag agggtgtggt cgtctatcag aataatttta atggtcattt
     4261 caagctttct tcagatgcac ccgtcaatga gacggtggtt ccctgttggg gttgggaacg
     4321 gatttctaaa acggcatgga tgcgcttggc acgctcctgc atgatgtgca gtccgacatg
     4381 gctgcccgta ggttctccta ttttctccgt gtcgaaacct tgtccgttgt cttggatggt
     4441 catggtaaag cgtccgccgt gttcggaaag ggtgaatttt acatgggtgg cgcgggcgtg
     4501 tttgcggatg ttggacaggc tttcctgcag gataaaaatc atttggagct gcgcttcctg
     4561 aggcggcagg aacgaaccgt tttcccaggc ggtttcgacc gttatcccgg tttgttgcgt
     4621 aaagcgggcg aataggtcgg caacggcttc gggaaattct ttattgctga ttttggtacg
     4681 gaagttgagc agcagttcgc ggacatcttc ataacattcc tgcacgcctg ttttgatgaa
     4741 gccgatgttt tctgcggctt cctcccgttt gttttcggca aaggcggttt ccagcatctg
     4801 tacctgtagg tttaggaacg ttaatgcttg tgcgatgctg tcatgtaatc cttgcgcaat
     4861 caggttgcgt tcctgcaata ctgcaagcag gcgtttttct tcctcctgtt ttgcgccggc
     4921 aagcgatacg cccaattgcc tgcctagtgt ttgaagcagg atgcggtcgt cttcatcaag
     4981 agaaatgccg tttggaaagc tgagcaacag cctgcccaat gtttcgttct ggtactcaat
     5041 ggggaagatt tcctcatggt acttccccaa atccgaagct gctgtgccgc aatccgcatg
     5101 atgaatggaa acataaacat cggatccgcc gtccaaacaa actctgccgg aatctgctcc
     5161 tacggcgggc aggatacggt ttagaaaatg ttctgcagcc tgttgcggta tgtaggattg
     5221 gtgcaggtcc cgtgtagttt ggtacagcag ggtcaggttt tgattttgtt tttcgagact
     5281 gcgtgtctgc tcggcgactt gtccttccaa atcatcatat aaaattttca acctgccgcc
     5341 catttgattg aaacaacgcc cgacctgttt gaattccggc gtaccgcctt cgggaaccgg
     5401 aatatcgaaa cacctccgtc cgatgcgttc cgcaccttcc cttaacgcct gcagcggccg
     5461 gataacccaa atctggtgcc aaaacagcat cagtacagac gacaccagcg tcatcaacat
     5521 aattgcccat tgaaaacgcc tgagccacca tgtgtttttt tcgttggcat tttccaatgc
     5581 ctgcaaaaac agttcgatgt ttccggcaaa gcggtagaga tcgacctgag tcggtcgccg
     5641 gtaggactgg agcgggggga ggatgtgtgc ctgccaatct ataatcagca tggattgtat
     5701 caaatcataa gcaagagggg tgtccgaagg aatcagcgga tggatggcat cgctttgggc
     5761 aatgcgtttt aaactttttt caaattcggc aacctgattg tcaatttgcg cacggggcga
     5821 gccttcaccc gccatgtatg ccagacggta tgcctgcatt ctcaagttgc ccgcctcttc
     5881 gatgacggag gccgcgtttt ccagacgcaa agagagcagc agtgtcaaaa cgacagacaa
     5941 tgccgccaac ccgacccaca gtccggtcag gagtttcagg cgcagggaaa ggctgatgcc
     6001 gtctgaaaaa cgggctggca gtatcatgct cggcgaaaaa ttgttctaaa taatgcaaac
     6061 aatatcattc tttggaatta gatacaactg ctcagaaaga attggttaag gaaaacttaa
     6121 tccgcaccgc ttcagtgtta aatcatgtta tgataaaatt cagataatat gaatttattt
     6181 gccgtctgct tcagacggca ttttgagtca ttgggaacgg cagactgcaa tcatgaaaac
     6241 ctcgaacttt tccaagagaa catccgcaat gaaaactttt gccctgatac tggccggcgg
     6301 tcaggcgagc cgtatgggag gcgaggacaa ggggcttgct cttttggggg gtaaggcact
     6361 gatagaccat gtcatcgaca gggtcaggcc gcaggtcagc catatcgcca tcagcaccaa
     6421 ccggaatttg gaagaatatg ctcgaagaag tccgcatatt tttcccgatg cgcggcagtg
     6481 gcagcatttc ggcccgcttt cggcattgtg taccgcagcc aacgatttgc agttggcgac
     6541 tgctgactgg cttttggttg tgccgtgcga tatgccgtat ctgccggacg atttggtggc
     6601 gaggtttgaa accgtgtcga aacgcacacc gttgtgcaat gcgtattatg tggaaacgcc
     6661 gataacgatg cactacaaca ttatgtatat ccgcccgcag attctgcaaa gcgcgattcc
     6721 ctatctgttt tcgggtatga aaacattaag aagctggttg cagcagcaaa gggcgcggtc
     6781 ggtcagattc gagtttgacg ggcattttgc cgacttgaac acgcaaaccg atttgcagga
     6841 gggataaggg caagaccgcc gaccggcgtg gaaaggaaag gtcaagccat accgggcggt
     6901 ttttgcccga atcggaggca taatgctgtc tgaaggcatt tcagacggca tttttcgcgg
     6961 ggagatgcta caatttgcac catttttacc gacacaggga aacaggatta tgtttacagg
     7021 cattgttcaa ggattgggaa aactgacggc aatccaccgc ccgtcggagg catttcagac
     7081 ttatgtcgtc gagcttccgc aagaggcggc ggacaatctg caacgcggcg catcggttgc
     7141 caataacggc tgctgcctga cgattaccga aatcgaagga aaccgcgtca gcttcgattt
     7201 aatggcggaa actttggcaa aaagcaattt ggggctgctg aaggaaggcg attgcgtcaa
     7261 catcgaacgg gcggcgcgtt tcggagacga aatcggcgga cacgtcatga gcggacacat
     7321 tatggcaacc gtgcctattg tcgaaatcga acgggacggg ttcaaccgca cggtttggtt
     7381 ttcgctcccg catgaactca aaccctatat cctgaccaaa gggttcgtcg gcttggacgg
     7441 ttgcagcctg accataggca aagtcgaaga cggccgtttc aatgtccatc tgattcccga
     7501 aactttggaa cggacgctgt tcggcagcag aaaggtcggc gacaggatca acatcgaaat
     7561 cgatccgaat acgcaggcaa tcgtcgacac cgtcgaacgg ctgatggcgc aaagatatgc
     7621 aaagtgaggt agagatggaa ttgaacgaat ttctcgataa agcctatgcc gttttgcggc
     7681 gtttggatgc cgtgcttccg cccgaacccg ggcatacgga ttggaacgcg cttgccttcc
     7741 gctggcagag tgcgggcaaa aaaggttttt tggaacactt gcccgatccg cacacctttc
     7801 ccttggtaag gctggcggga gtcggcaggc aaaccgaatt gctggtgcgt aataccgaac
     7861 agttcattgt cggcagaccc gcgaataacg tattgatgag cggcgcgcgc ggaacaggca
     7921 aatcctcgct ggtcaaagcc ctgctacacg aatatgcgaa taagggattg cgcctgatcg
     7981 aagtcgataa aagcgattta atcggcctgc cttacctgtt gacgcttttg aaggaacgtc
     8041 cggaaaaatt tatcgtattt tgcgacgatt tgtcgtttga aagcggcgat gaaacctata
     8101 aggcattgaa aaccgcgtta gacggcggtc tgtctcaacg ttgcgccaac gttttggttt
     8161 acgcgacttc caacagacgg catctgatgc ccgaatattt tgacgagaat gccggtacga
     8221 cggggatgcg gggggaaatc catcagaaag aagcggtgga agaaaaaata tccctgtccg
     8281 accgattcgg attgtggctc agtttttatc cgttcgatca aaacgattat ctggcggcgg
     8341 tgcaaaattg gctggaagat ttcggcgtgc cgtatgatga aaccgcacag atggcggcat
     8401 tgcagtgggc gcagacgcgg ggcagccgtt cgggacgttc cgcgtggcag tttgcctgcg
     8461 actgggcggg caggctgccg aaacaacggg cgttgtgagc gtttcgggga ttatttgagg
     8521 caggaagaaa gccacatttg ctgctgttgc ggtgtgagga tatggaagaa ccggtgttgg
     8581 atttccaatt cgtccaccgc aaaatccata ccggacaaat agcggctttc gacataatcg
     8641 cgcgcctcgt tccgattaaa aacatccgag gaaatgattt cgacgacaga ccggcggcgg
     8701 ctgtgttcgg aatgcataac cttcaaacgc gccctgtcgc ccgccatttt gaaggcggcg
     8761 cggattttac gcagttcatt gtgctgaccc tgtgtcagtc cgagccggcg tatgtcgcag
     8821 ttcggttgaa aatcgttcag ggggatataa gccgtggcgg cgtgggaaag ctggcaggaa
     8881 agcaaagcca tacttaaaaa agaggcggca ggtttggcaa aacggcaggg agcaggcagt
     8941 ggcacggctt ttcctcttgt tggaaatttt aggaaatata ctagattgac gtgtgaaaga
     9001 tggtattatc gcggttaact tttgttaata atgcgtacgt atgtccggca ggcagacata
     9061 acggcggaat cggaac
//
LOCUS       DBBZYD010000085         9048 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.085, whole genome shotgun sequence.
ACCESSION   DBBZYD010000085 DBBZYD010000000
VERSION     DBBZYD010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9048
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.085"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            23..583
                     /locus_tag="ACJJDL_001657"
     CDS             23..583
                     /locus_tag="ACJJDL_001657"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7574334.1"
                     /translation="MGIQDEKSPETVLPDKFPHRQVWIPACAGMTMQVFLTIPGYDVE
                     AEIEKFVWMDAVIWQMPGWWMHEPWTVKKYIDGVLTAGHGKLYQSDGRHSVNPTEGYG
                     TGGLLQGKKHMLSLTWNAPIEAFTREGDFFEGKGVDVLYMHFHKANEFLGMTRLPTFL
                     CNDVVKNPQVEKYLADYQAHLEKVFG"
     gene            complement(791..2176)
                     /gene="pntB"
                     /locus_tag="ACJJDL_001658"
     CDS             complement(791..2176)
                     /gene="pntB"
                     /locus_tag="ACJJDL_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HGG7574335.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGINGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(2242..2625)
                     /locus_tag="ACJJDL_001659"
     CDS             complement(2242..2625)
                     /locus_tag="ACJJDL_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HGG7574336.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRDFLARTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(2629..4170)
                     /locus_tag="ACJJDL_001660"
     CDS             complement(2629..4170)
                     /locus_tag="ACJJDL_001660"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HGG7574337.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWVCPLIYKVNAPSEQELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKDVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTPSEKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFFVTRRMLN
                     MFRKG"
     gene            4460..5293
                     /gene="serB"
                     /locus_tag="ACJJDL_001661"
     CDS             4460..5293
                     /gene="serB"
                     /locus_tag="ACJJDL_001661"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HGG7574338.1"
                     /translation="MPHALVLQFPSAETLPSDFPSRLPEPDYADEKRMRFIVEEGFSL
                     SEKDAALLGSRQIDHAVLSDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKVQAAADACINFGGLERVRGLF
                     G"
     gene            5357..6580
                     /locus_tag="ACJJDL_001662"
     CDS             5357..6580
                     /locus_tag="ACJJDL_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HGG7574339.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGTDGVS
                     ISFREGVAQASGMRRVAVLTLCGAVAGSGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLAV
                     NTSLLWFSAVIGPILGATAVFFQRTAQKFPFIKRDNIKIIPLAVCMFALIGVIAVWFP
                     EILGNGKAGNQLTFGGLTGWQHSLELTAVKWLVVLMALAAGAYGGLITPSMMLGSTIS
                     FAAAAAWNSVFPEMPSGSAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            6741..8321
                     /gene="purH"
                     /locus_tag="ACJJDL_001663"
     CDS             6741..8321
                     /gene="purH"
                     /locus_tag="ACJJDL_001663"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HGG7574340.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLTKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDILSGTPEIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDICR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRITARKAQDANFDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGIRHFRH"
     gene            8934..>9048
                     /locus_tag="ACJJDL_001664"
     CDS             8934..>9048
                     /locus_tag="ACJJDL_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HGG7574341.1"
                     /translation="MLIHYIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIE"
BASE COUNT         2057 a         2435 c         2540 g         2016 t
ORIGIN      
        1 acattccgtc attcccacga aagtgggaat ccaggacgaa aaatctccag aaaccgtttt
       61 acccgataag tttccgcacc gacaggtctg gattcccgcc tgcgcgggaa tgacgatgca
      121 ggtatttctg acaattcccg gctatgatgt tgaggcagaa atcgaaaaat tcgtttggat
      181 ggatgctgtg atttggcaga tgccgggctg gtggatgcac gagccttgga cagtgaaaaa
      241 atacatagac ggagtattaa ccgctggaca cggcaaactc taccaaagcg acggcagaca
      301 cagcgtcaat ccgactgagg gctacggcac aggcggcttg ttgcaaggca aaaaacatat
      361 gctttcactg acttggaatg cgccgattga ggcgtttacc cgcgaaggcg atttctttga
      421 gggcaaaggc gttgatgttt tgtatatgca cttccacaaa gccaacgagt ttttgggtat
      481 gacccgcctg ccgacattct tatgtaacga tgtggttaaa aatccgcaag tggaaaaata
      541 cttggcagat tatcaggcac acttggaaaa agtgttcggc taattaaaaa tccatcttca
      601 acacggagat ggattttgtt tgtttcgttg attttgtgtc agtttcagat gtaggtgctt
      661 attcggacgg gccgtctgaa aatgtttgcc ccaatgcaaa aaaatcactg caaaccttca
      721 taaacggggt ttgcagtgat tttttcaaat caaacagatt gaaaacctgc gccgaattgt
      781 tcagacggca ttattttttc agttcggaca gaatgtcatc tacggttttc ttcgcatctc
      841 cgaaacacat cacgctgttt tcgttgaaga acagtgggtt ttgtacacct gcgtagccgg
      901 tattcatcga gcgtttgaag acgacgactt cttttgcctt ccacacttcc aacacgggca
      961 tacccgcaat cgggctgttc gggtcggttt gggcggcggg gttgacggtg tcgttcgcac
     1021 cgatgaccaa gaccacatcg gtttcgggga agtcgtcgtt gatttcgtcc atttccaaaa
     1081 cgatgtcgta ggggactttg gcttcggcga gcagtacgtt catatgaccg ggcaggcggc
     1141 cggcgacggg gtggatgccg aagcgtactt cggtgccgtt tttacgtaaa agctcggtga
     1201 tttcggcaac ggggtattgc gcttgtgcga ctgccatacc gtagcccggg gtaatgatga
     1261 cattgtttgc gcctttcagc atttcggcaa tatcggcagc tttgacttct cggtattccc
     1321 ctatctcttg gctgccggaa gataatgtgc cgctgtcgct gccgaaaccg ccggcaatta
     1381 ccgagacaaa cgagcggttc atggctttgc acataatgta ggacagaatc gcgccgcttg
     1441 agccgaccag cgcgccggta acgatgagca ggtcgttgga gagcatgaag cctgccgctg
     1501 cggccgccca gccggagtag gagttgagca tggacacgac cacgggcata tctgcgccgc
     1561 cgatggaggc aaccaagtgc cagccgaatg cgagggcaat cagggtcata atcagcagga
     1621 tgaagccgct accgttaatg ccgacgaata cgagcagcaa cacaaacgat acggcgagcg
     1681 ccagtgcgtt gagcttgtgt ttggcgggca gttgcagcgg gctgctgctg attttgccgt
     1741 tgagtttgcc gaatgcgacc agcgagccgg taaaggttac cgcgccgatg aaaatgccca
     1801 aatagacttc gaccagatgg atggtgtgca tatcgtgcga aacgttgccc ggctcgatat
     1861 agctgttgaa gccgaccaaa accgccgcta ggccgacgaa gctgtgcagc agggcaatca
     1921 gttcgggcat ttcggtcatt tccacctttt tggctttgta gatgccgatt gccgcgccga
     1981 tgagcatggc gatgatgatc cagcccagtc cgtgggtatt gtcggaaaaa acagttacaa
     2041 aaagggcgac cgccataccg gcgataccgg aatagcagcc ctgtttggcg gtttcctgtt
     2101 tggacagccc cgccagtgag aagatgaata aaattgcggc aacgatatac gccgctgtta
     2161 cgagtcctga agacatggaa attctccgat tttcgatgat ttgtttttaa tgccgtctga
     2221 actgttcaga cggcatctgt ttcaagcagc cgcgacaaac agcccgacgg tgcaggcaaa
     2281 tccgcccgcc cacatcagcg agcgcaatgc tgctttgtct gcgatgtagc accagataaa
     2341 ggcgaggcgg aacaggatga acaggccggc aagcgtgttg acggttgctt gtccggcatt
     2401 gccggttgcg tgtgccgtca aaacggcggc ggcaaacggt gcaaaggctt caaaaccgtt
     2461 ttgctgcgcg gcgtgggcac gggcggctgt gccttgcgtg cgcgccagaa aatcgcgcgg
     2521 attgtggttg tctttaaacc ggaatccgcc cgcttttttg gcatatgccg cacaaaaaag
     2581 cggcaataag caggcaatca ggatgcacca ataggcaaaa gtcatgcttt atcctttcct
     2641 aaacatattc aacatgcggc gcgttacgaa gaagccgccg aagatattga tgctggcaat
     2701 caggatggcg atgaaggcaa gcagggtaac gaaaccgttg ccttggctga tttgcagcag
     2761 cgcgccgacg acgatgatgc cggagatggc gttggttacc gacatcagcg gtgtgtgcag
     2821 cgagtggctg acgttccaaa cgacatagta gccgatgacg caggcgagga cgaagacgat
     2881 aaagtggttc aggaatgctg cgggtgcgac cgcgccgacc cacagtacca acacggcggc
     2941 gatgacggcg ggcgcgagtt ttttccacag gggaacgggt ttcggttcgg gcttggcggc
     3001 aggcgcggct ttttcagacg gcgtttgctg cggttgggcg gaaacttgaa tcggcggagg
     3061 cgggaaggtg atttcgccgt cgcgggtaac ggtcatgttg cggataatca cgtcttcaaa
     3121 atccagcgtg atttcgccgt ctttgttcgg gcttaacaac ttggtcaggt tgaccaggtt
     3181 ggtggcgtaa agctgggaag actgtccggc aaggcggttt gccatgtcgg tgtagccgat
     3241 gattttcacg ccgttgccgg ttacggacaa ttcgcccggt cgggtgagtt cgcagttgcc
     3301 gcccgtcgcc gccgccaaat cgacgatgac ggagccggat ttcatgcttt ccaccatttc
     3361 tttggtaatc agcttgggcg cgggtttgcc cggaatggcg gcggtggtga tgatgatgtc
     3421 cacgtctttc gcctgctcgg caaagagctt catctcggcg gcgataaatt cgtcgctcat
     3481 cactttggca tagccgtcgc cgctgccgcc cgattcttgc gggaagtcga gtttcaaaaa
     3541 cttgccgccc atcgattcga tttgttccgc cacttccaag cgggtatcga acgcgcgcac
     3601 cactgcgccg agcgagtttg ccgtaccgat cgccgccaaa cctgccacac ctgcgccaat
     3661 caccaaaacc tgcgcgggcg gcactttgcc ggcggcggta atttgaccgg tgaagaaacg
     3721 gccgaaggcg ttggcggctt caattacggc gcggtagccg ctgatgtttg ccatcgaaga
     3781 caaagcgtcc aaagcctgcg cgcgcgaaat gcggggcacc atatccatcg ccagcgcgtt
     3841 cactttcttg gcgcgcaagg cttcgaccaa agcctcgttt tggcgcggcc acaggaagct
     3901 gacgatggtt tgaccttcgt tcaaaagcgg cagttcctgt tcggacggcg cgttgacctt
     3961 ataaatcaaa gggcagaccc aaaccgccgc tttgtcggca acggttgcgc ctgctgtttg
     4021 gtaagcggca tcgtccaaac ttgccgccaa acctgcaccg ctttcgacaa cggtttcaaa
     4081 gcccagtttg cccagcaggg cgacggtggc gggcgtgcag gcgacgcggg tttcgccgga
     4141 taatgactcg cgtgggatac cgattttcat ctctgaatcc tttttcgggt agtttatatg
     4201 tatcgtgggt taaatttaaa tcggggcagg gcggagcaac gccgtaccgg tttaaaaccg
     4261 attcacttca aatgttaata tattttagat aatcccctta taacgaattt tcatcaggct
     4321 ggcaatagtt gcggcatttt cccgtgttgt ccgacacata ctgccgtttg cgtttgaagt
     4381 cattttccga ttgcagtccc gcccgccgta acattctttg ccgtttcact atataatccg
     4441 cattttttga gccgccgtta tgccgcacgc cctcgtcctc caatttccct ccgccgaaac
     4501 cctgccttcc gacttcccct cacgcctgcc cgaacctgat tatgctgatg aaaagcgtat
     4561 gcgttttatc gttgaagaag ggttttcttt aagcgaaaaa gacgcggcgt tacttggcag
     4621 ccgtcaaatc gaccacgccg tgttgtcgga tatggatttt ggcgaactcg gtttgattgt
     4681 cagcgatatg gattcgacgc tgattaccat cgaatgcgtc gatgaaattg cggcaggcgt
     4741 gggtttaaaa gacaaggtag cggaaattac cgagcgttcg atgcgcggag agttggattt
     4801 cgagcagtcg ttgcgcagcc gcgttgcgct gttggcggga ttggacgaac agattttggc
     4861 ggacgtttat gaaaacgttt tgaagctctc gcccggtgcg gaattcttgt tggacgaatg
     4921 caaaaggcac gatgtgaaat tcctgctggt gtccggcggg ttcacatttt ttaccgaaag
     4981 gctgcaacaa cgactcggct tcgaatacca acacgccaat gttttggaaa ttgaaaacgg
     5041 caggttgacc ggtcgtctga aaggcagaat catcgacgcg caggcaaagg cggatttatt
     5101 gcgcgaatac cgcagccgcc tcggattgca gccgcatcag gtgttggcga tgggcgacgg
     5161 tgcgaacgat attccgatgc tcaaagaagc gggcataggc gtggcttacc gtgccaaacc
     5221 gaaagtgcag gcagccgccg atgcctgtat caacttcggc ggtttggagc gtgtacgcgg
     5281 cctgttcgga taggcggata ggaaacggat gccgtctgaa aggttttcag acggcatttg
     5341 aacggcagga acgacagtgg gacgcagaaa actttggttt gccctggcag cagcgggcgt
     5401 tatcggcggt ttggtcggca ttgtgctgac ggaactgatg cacttcatac aacatacggc
     5461 atacggttat ggcacggacg gcgtgtccat ctcgttccgc gaaggtgtgg cacaggcttc
     5521 cggtatgcgg cgcgttgccg tgctgacgct gtgcggcgcg gtcgcaggca gcggctggtg
     5581 gttgctgaaa cgtttcggca agccgcaaat cgaaatcaaa gccgccttga aacagccgtt
     5641 gcaggggctg ccgtttctga cgacggtttt ccatgttctg ctgcaaatca taacggtcgg
     5701 actcggttca ccgctcggac gggaagtcgc cccgcgtgaa atgactgccg cgttcgcttt
     5761 tgccggcggc aggcggttgg gtttggatga agacgaaatg cggctgctga ttgcttgcgc
     5821 ttcgggtgcg ggtttggcgg ccgtgtataa cgtgccgctc gcctccacac tttttatcct
     5881 cgaagccatg ctgggcgtgt ggacgcagca agccgtcgcc gccgcattgc tgacttccgt
     5941 catcgccacc gccgtcgcgc gcatcggctt aggcgacgtg cagcaatatc atcccgccaa
     6001 ccttgccgta aacacttcat tactttggtt ttccgccgtc atcggcccga tactgggcgc
     6061 aaccgccgtc tttttccagc gcaccgccca aaaattcccc ttcatcaagc gcgacaacat
     6121 caaaatcatt cccttggcag tctgcatgtt tgcgctcatc ggcgtgattg ccgtttggtt
     6181 tccagaaatt ttgggcaacg gcaaagcagg caaccaactg acctttggcg gtttgaccgg
     6241 ttggcaacac agccttgagc tgaccgccgt caaatggctg gttgtcttga tggcgttggc
     6301 ggcaggcgca tacggcggac tgattacgcc gtctatgatg ctcggcagca ccatttcttt
     6361 tgcagccgcc gccgcgtgga acagcgtttt ccccgaaatg ccgtctggaa gcgcggcagt
     6421 cgtcggagcg gcggtgtttc tcggcgtatc gctcaaaatg ccgctgaccg ccattgtgtt
     6481 cgtattggaa ttgacctacg cgccgctgtc cctgctgctg cctttgtgca tcggcatggc
     6541 gggggcattg ggaacatcgg gaaaaatggg cttcaaataa atgccgacaa atgccgtctg
     6601 aaaggttttc agacggcatt tctttgtaaa ttgtcagcaa tatctgcaaa aacctactgc
     6661 caaaaaacta gaaatagcgg ataataccgc cccgaaaaag ttcccctttc cccatccaac
     6721 tgtcagaaaa ggaagcccca atgtccgtca tcaaacgcgc cctgatcagc ctgtccgaca
     6781 aggcaggcgc ggtcgaattt gcccaaaccc tgaccaagct cggtgtcgaa atcctctcca
     6841 ccggcggcac ggcgaaactg cttgccgatg cgggcgttcc cgtgattgaa gtcgccgact
     6901 ataccggctt ccccgaaatg ctcgacggcc gcgtgaaaac gctgcatccg aaaatccacg
     6961 gcggtatttt gggtcggcgc gatttgggcg aacacgtcgc caagatggaa gaacacggca
     7021 tcggcaatat cgaccttgtg tgcgtcaacc tttatccctt cgccgccacc atcgccaaac
     7081 caaactgcac actggaagac gcgattgaaa acatcgacat cggcggcccg accatggtgc
     7141 gttctgccgc aaaaaactgg aaacacgtcg ccatcgttac cgacaccgcc gacttccccg
     7201 ccatcgccgc cgaactcgaa gccaacaacg gcgcgttgag cgacaaaacc cgcttcaacc
     7261 tgtcgcgcaa agcgttcagc cacaccgccc aatacgacgg catgatttcc aactacctga
     7321 cctcgctttc agacgacatc ttgagcggca cgcccgaaat cggtgaattc ccgagccagt
     7381 tcaaccaaag ctggattaaa gtgcaagaca tgcgctacgg cgaaaacccg catcagcgcg
     7441 ccgcgttcta ccgcgatatt gaccccgccg caggcagcct ttccgcctac aaacaactgc
     7501 aaggcaaaga attgtcttac aacaacatcg ccgatgccga tgccgcatgg gaagccgtca
     7561 aatcctttga cgcgccagcc tgcgtgatcg tcaaacacgc caatccgtgc ggcgtcgccg
     7621 ttgcagccga tacattgacc gcctacaaac tcgcctacgt caccgacacc accagcgcgt
     7681 tcggcggcat catcgccttc aaccgcgaag tggacggcga aaccgtcaaa cagattaccg
     7741 acaaccagtt tatggaagtc ttgatggcgc cgaagtttac cgccgaagcc ctcgaaatcg
     7801 ccgccgccaa gaaaaacgtg cgcgtattgg aagtgccgct tgaggcaggc gcaaaccgct
     7861 tcgaactcaa acgcgtcggc ggcggactgt tggtacaaac gcccgacatc tgccgcatca
     7921 gccgcgccga tttgaaagtc gtctccaaac gccaaccgac cgagcaggaa tggaacgatt
     7981 tgctgttcgt ctggaacgtc gcaaaatacg tcaaatccaa cgccatcgtg ttcggcaaag
     8041 gcggacaaac ctacggcatc ggtgcaggcc aaatgagccg cgtggacagc acccgcatca
     8101 ccgcccgcaa agcgcaggac gccaatttcg acctcaacgg cgcgtgtgcc gcctccgatg
     8161 ccttcttccc cttccgcgac ggcgtggatg tgattgccga acagggcatt aaagccatca
     8221 tccatccggc aggttcgatg cgcgatcaag aagtcttcga cgcggcagac gaacacggca
     8281 ttgcgatggt ggtaaccggc atccgccact tccgccatta aggcagatga acaaggcaat
     8341 gccgtctgaa gggctttcag acggcatttt gcgctatttt gtgaaggtag ggatgacggt
     8401 tcgggtattc ctgacagggt ggattttcaa ggtgttgtat agggtgtagg aggattcgta
     8461 aaaggtggga tgcagggtgt gcttcagccc gctgcatcaa aaatttttgg agaaccggcg
     8521 ggagtcggcg gttttggttt cggcggggac ggtggaaatg ggtaacattg acggaatcga
     8581 cggaagcggt gggctgaagc ccacccttgt atattggaat cactgtatca tagcaacaaa
     8641 ccgcccggcc gccacccgcg cccacccaag gcacacaacc gttgcgtagc tcagggagcg
     8701 gcagggcaac ccatcgacac aaccggacag ttgccggaca acacaaccga atgcaaggca
     8761 ggtttatgat gagtacccaa taccattacg caggtatagt gaattaaatc taaaccagta
     8821 cagcgttggt tcgccttagc tcaaagagaa cgattctcta aggtgctgaa gcaccaagtg
     8881 agtcggttcc gtactatccg tactgtctgc ggctcgccgc cttgtcctga tttttgttaa
     8941 ttcactatat cgacatcgcc aaacgaaact tcgtcatcgc cgtttcgtct ttgtctaaaa
     9001 ccaaaaccga aaccaacaac cccaaaggta tcgcccatac tatcgaat
//
LOCUS       DBBZYD010000086         9032 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.086, whole genome shotgun sequence.
ACCESSION   DBBZYD010000086 DBBZYD010000000
VERSION     DBBZYD010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.086"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            33..1925
                     /gene="mafB"
                     /locus_tag="ACJJDL_001665"
     CDS             33..1925
                     /gene="mafB"
                     /locus_tag="ACJJDL_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HGG7574342.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISESSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPIKGIGAVRGKYGLGGI
                     TAHPVKRSQMGEIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLANKRHPKTKVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAHAQREWENKTGLDFNHF
                     IGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVEIKKPDGSWEMKKGRGG
                     KPMTNHSMFPKDWDEARIRAEVTSAWEKRKELEGQKWRGTSKSGVEIEGFTEPNRTAY
                     PLYNSK"
     gene            1952..2371
                     /gene="mafI"
                     /locus_tag="ACJJDL_001666"
     CDS             1952..2371
                     /gene="mafI"
                     /locus_tag="ACJJDL_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MafI"
                     /protein_id="HGG7574343.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            2461..2532
                     /locus_tag="ACJJDL_001667"
                     /pseudo
     CDS             2461..2532
                     /locus_tag="ACJJDL_001667"
                     /inference="COORDINATES: protein motif:HMM:NF026862.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin type 17 domain-containing
                     protein"
     gene            2529..2771
                     /gene="imm31"
                     /locus_tag="ACJJDL_001668"
     CDS             2529..2771
                     /gene="imm31"
                     /locus_tag="ACJJDL_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm31 family immunity protein"
                     /protein_id="HGG7574344.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            2849..3094
                     /locus_tag="ACJJDL_001669"
     CDS             2849..3094
                     /locus_tag="ACJJDL_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7574345.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PNYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            3097..3486
                     /locus_tag="ACJJDL_001670"
     CDS             3097..3486
                     /locus_tag="ACJJDL_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574346.1"
                     /translation="MWKIIKEDSNDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDGGIADIDNIVGFVSSCSLSKSKKNALTGIAFLRGIDVYDPPVSKEK
                     ALKALEKYPEIYQKFQHFFPFVELPPL"
     gene            3534..3704
                     /locus_tag="ACJJDL_001671"
                     /pseudo
     CDS             3534..3704
                     /locus_tag="ACJJDL_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
     gene            3707..4105
                     /locus_tag="ACJJDL_001672"
     CDS             3707..4105
                     /locus_tag="ACJJDL_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574347.1"
                     /translation="MLGLTRNNCDDLGFAILCYERNAADKKEFLDWLYGIVRTVPAES
                     FPRYLIDLIDCLESDDCSINIYNIIGFVPTTGMTKKEKDAVYGITYIRNQEFYDIPIT
                     REKALKALKKHPEIYQKFRHFFPFVELPPL"
     gene            4206..4595
                     /locus_tag="ACJJDL_001673"
     CDS             4206..4595
                     /locus_tag="ACJJDL_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574348.1"
                     /translation="MWKIIKEDSNDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDVGIGDIGNIVGFAPSSSLPKSKKNALTGIAFLRGIDVYDPPVSKEK
                     ALKALKKHPEIYQKFQHFFPFVELPPL"
     gene            4743..5132
                     /locus_tag="ACJJDL_001674"
     CDS             4743..5132
                     /locus_tag="ACJJDL_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574349.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
     gene            complement(5173..6630)
                     /locus_tag="ACJJDL_001675"
     CDS             complement(5173..6630)
                     /locus_tag="ACJJDL_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HGG7574350.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSYIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(6645..7475)
                     /locus_tag="ACJJDL_001676"
     CDS             complement(6645..7475)
                     /locus_tag="ACJJDL_001676"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HGG7574351.1"
                     /translation="MAHYAIGDIQGCFDELTSLLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            complement(7553..7942)
                     /locus_tag="ACJJDL_001677"
     CDS             complement(7553..7942)
                     /locus_tag="ACJJDL_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG7574352.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            complement(8078..8602)
                     /gene="nspA"
                     /locus_tag="ACJJDL_001678"
     CDS             complement(8078..8602)
                     /gene="nspA"
                     /locus_tag="ACJJDL_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HGG7574353.1"
                     /translation="MKKALAALIALALPAAALAEGASSFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGMRVKF"
     gene            complement(8773..>9032)
                     /locus_tag="ACJJDL_001679"
     CDS             complement(8773..>9032)
                     /locus_tag="ACJJDL_001679"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574354.1"
                     /translation="QTNRRPPGKTRPERVRKICLSMENAAASPAGRFRRHSRRRKCPT
                     LKAQTHTKPYACTCNNPTDTAVFSKPFASFTHPPRDAAATI"
BASE COUNT         2450 a         1833 c         2486 g         2263 t
ORIGIN      
        1 tttcattccg taccatctta aggaacatca aattgggcat ttcccgcaaa atatccctta
       61 ttctgtccat actggcagtg tgcctgccga tgcatgcaca cgcctcagat ttggcaaacg
      121 attcttttat ccggcaggtt ctcgaccgtc agcatttcga acccgacggg aaataccacc
      181 tattcggcag caggggggaa cttgccgagc gcagcggtca tatcggattg ggaaacatac
      241 aaagccatca gttgggcaac ctgatgattc aacaggcggc cattaaagga aatatcggct
      301 acattgtccg cttttccgat cacgggcacg aagtccattc ccccttcgac aaccatgcct
      361 cacattccga ttctgatgaa gccggtagtc ccgttgacgg atttagcctt taccgcatcc
      421 attgggacgg atacgaacac catcccgctg acggctatga cgggccacag ggcggcggct
      481 atcccgctcc caaaggcgcg agggatatat acagctacga cataaaaggc gttgcccaaa
      541 atatccgcct caacctgacc gacaaccgca gcaccggaca acggcttgcc gaccgtttcc
      601 acaatgccgg cgctatgctg acgcaaggag taggcgacgg attcaaacgc gccacccgat
      661 acagccccga gctggacaga tcaggcaatg ccgccgaagc cttcaacggc actgcagata
      721 tcgtcaaaaa catcatcggc gcggcaggag aaattgtcgg cgcaggcgat gccgtgcagg
      781 gtataagcga aagctcaaac attgctgtta tgcacggctt gggtctgctt tccaccgaaa
      841 acaagatggc gcgcatcaac gatttggcag atatggcgca actcaaagac tatgccgcag
      901 cagccatccg cgattgggca gtccaaaacc ccaatgccgc acaaggcata gaagccgtca
      961 gcaatatctt tacggcagtc atccccatca aagggattgg agctgttcgg ggaaaatacg
     1021 gcttgggcgg catcacggca catcctgtca agcggtcgca gatgggcgag atcgcattgc
     1081 cgaaagggaa atccgccgtc agcgacaatt ttgccgatgc ggcatacgcc aaatacccgt
     1141 ccccttacca ttcccgaaat atccgttcaa acttggagca gcgttacggc aaagaaaaca
     1201 tcacctcctc aaccgtgccg ccgtcaaacg gaaagaatgt gaaactggca aacaaacgcc
     1261 acccgaagac caaagtgccg tttgacggta aagggtttcc gaattttgag aagcacgtga
     1321 aatatgatac gaagctcgat attcaagaat tatcgggggg cggtatacct aaggctaagc
     1381 ctgtgtttga tgcgaaaccg agatgggagg ttgataggaa gcttaataaa ttgacaactc
     1441 gtgagcaggt ggagaaaaat gttcaggaaa cgagaagaag gagtcagagt agtcagttta
     1501 aagcccatgc gcaacgagaa tgggaaaata aaacagggtt agattttaat cattttatag
     1561 gtggtgatat caataagaaa ggcacagtaa caggagggca tagtctaacc cgtggtgatg
     1621 tacgggtgat acaacaaacc tcggcacctg ataaacatgg ggtttatcaa gcgacagtgg
     1681 aaattaaaaa gcctgatgga agttgggaaa tgaaaaaagg aaggggcgga aaacctatga
     1741 caaatcattc tatgttccca aaagattggg atgaggctag aattagggct gaagttactt
     1801 cggcttggga gaaaagaaag gaattagaag gtcaaaaatg gagaggtaca agtaaatctg
     1861 gtgttgaaat agaaggattt acggaaccta atcgaacagc ttatccactt tataatagta
     1921 aatgaagtat tgattaaaaa ggtgttttta aatgtataaa ataaaatgtt tttatgatca
     1981 gtttagttct ggtgaattat ttaactactg ccagttttta gataattctt ctaatcaaaa
     2041 gataaataca cgaggaacgg tgtatcaata tattatttat gttttaacag gagaccttta
     2101 tctacaaaaa gacatagatg aaaatttaga atttatccat caagcagaaa ataatcccaa
     2161 tgaagtttat tcaggaggtg gacaaggttt ttgctgggat atttctgctg aaaaagtagt
     2221 tttctatcac aacgaatttg atgaagaaga cggctggcct gatttaagct gttcgctgca
     2281 tacttttaaa actgctttaa ttgcttggaa tgcttttttg caattgccta aaagtattca
     2341 ttcggtggtg gagactgtga ttgaggaata agcataatta gcttaatgaa tagaatcagc
     2401 gatatagatt ggactgcaaa tccacgctta tacgctgtgc catgattaac aggaagagag
     2461 caacttggat gggctagtag ggatggtaag catttaaata tatcaattga tggaaagatt
     2521 acacacaaat gactaattta aaattagatt tctactctga agttattata aaagattctt
     2581 gccctaatga tttgttagaa aatggtgaga ctattaaagg aaaaaaagga gtggtattag
     2641 gtataagcga agaagatggt ataatctatg gctatactat tttacttttt gatataaaat
     2701 attgtatata tatagataag aaatatatta taccgactgg aaaaaaattc tctcgcgatg
     2761 atttttatta gctaatttaa gtaatttaag caagtttttt agatactgaa actggtaatt
     2821 atgtttatgt aagcataagg agttcagatt gaaggattct acagggcaaa tgaggctggc
     2881 aaccaaggat ttggcggaag ccattaaacg aggagaagta cgtagttctg cttttacaac
     2941 aaagcaacta aaggcaatcg aaaaaggaga atctaaaata ccaaattaca cttggcatca
     3001 tcatcaagac actggaagga tgcaattgat taatgaagac ttgcatcatg ataccggcca
     3061 tatcggttgg agagcgatga gtaaaggaaa gtaactatgt ggaaaatcat aaaagaggat
     3121 agtaatgatt taggatttgc aattaaatgc ttattctctc agtctattga tttaaatgaa
     3181 ttcaaattat ggattgaaca agtaatacga gatatgccca tcgaggacat cccgttttat
     3241 atttttgatt tggcggattt tgatggggga attgccgata ttgacaatat tgtaggtttt
     3301 gtttcgagtt gcagcctatc aaaatcgaaa aaaaatgcct tgacgggcat tgccttctta
     3361 aggggtatag atgtctatga ccctcccgtt tcaaaagaaa aagcattaaa agccttagag
     3421 aaatatcctg aaatttatca gaagtttcag catttctttc cgtttgtaga gctgcctccg
     3481 ctttaaacag tcaaaatgcc gtctgaaaca atattcggct ttcagacggc atttttgata
     3541 caaagcaggt aaccaaaaga gtgtttgacg gaaaaggaga agctaaaata ccgagctata
     3601 cttggcatca tcatcaggat acgggacgaa tgcagttaat atccgaaaga aagcatacgc
     3661 aaacagggca tataggtggt gaagcaatgg ataaaggaaa atgattatgt tggggcttac
     3721 acggaacaat tgtgatgatt tgggatttgc tatattgtgt tatgagcgca atgcagccga
     3781 caaaaaagaa ttcttggatt ggttatatgg aattgtcagg actgtccctg ccgaaagttt
     3841 tccaaggtat ctgattgatt taatagattg tttggaatca gatgattgtt ccataaatat
     3901 atataatatt attggctttg ttccaactac cggtatgacg aaaaaggaaa aagatgccgt
     3961 atatggcatt acctatatac ggaatcaaga gttttacgat attccgatta ctagggagaa
     4021 ggcgttaaaa gccttaaaaa aacatcctga aatttatcag aagtttcggc atttctttcc
     4081 gtttgtagaa ctgcccccgc tttaaacagt caaaatgccg tctgaaacga tattcggctt
     4141 tcagacggta tttttgatat aaagcgggta actaaaagag cgtttgacgg caaaggaaga
     4201 taattatgtg gaaaattata aaagaggata gtaatgattt aggattcgca attaaatgct
     4261 tattctctca atctattgat ttaaatgaat tcaagttatg gattgaacaa gtaatacgag
     4321 atatgcccat tgaggacatc cctttttata tttttgattt ggcggatttc gatgtaggaa
     4381 ttggcgatat tggcaatatt gtaggttttg ctccgagttc cagcctgccg aaatcgaaaa
     4441 aaaatgcctt gaccggcatt gccttcttaa gggggataga tgtctatgac cctcccgttt
     4501 caaaagaaaa agcattaaaa gccttaaaga aacatcctga aatttatcag aaatttcagc
     4561 atttctttcc gtttgtagag ctgcctccgc tttaaacagt caaaatgccg tctgaaagac
     4621 cgtccgccgt tcagacggca tttttgatat aaagcggata actaaaagag cgtttgacgg
     4681 caaaggagaa tctaaaatac cggatgtatc ggttgggaag caatggataa aggtaaataa
     4741 ttatgtggaa aattagtaaa gaaaattgtg aagatttagg atttgcaata gtctgtatgt
     4801 tctatgatgc tattaatctt tctgaattta aattatggtt ggatatagtt gtcagagata
     4861 ctcctattga tacaattcca ttgtatattt ttgatttgat tgattttgat aagagtatag
     4921 gggaaattta tgatgtaatt ggagtcgtta attatggtta catttcaaat gatcaaaaaa
     4981 atgcattaac gggcattgcc ttcttaaggg ggatagatgt ctatgatccg cctatttcaa
     5041 aagaaaaagc attaaaagcc ttagagaaat atcctgaaat ttatcagagg tttcagcatt
     5101 tctttccttt tgtagagctt ccgctttttt aaaagacaat atgccgtctg aaaagttttc
     5161 agacggcatt ttttatttct tccagtaggc gggggtgaag aggatgaaga cggtgaagat
     5221 ttccagcctg cccaagagca tggcggtaac gcagatccat ttctgcatca cgtccaaacc
     5281 ggcgtaattg ccggcgggcc cgacttcgcc caggccgggg ccggcgttgg tgatgcaggc
     5341 gatgacggcg gtgaaggcgg tggtaaattc cataccgctc gccatcagca ggaagctgaa
     5401 gaggacgacg gtcataaagt agatgaagat gaaggacata acggtcagcg cgaggcggtc
     5461 gggtatggcc ttgccgctga ttttgacggt gcggacggct ttggggtgca gcagcaccat
     5521 catttcgcgc aggctgaatt tgaacaggac gagggcgcgt atggttttga tgccgccgcc
     5581 ggtcgagccg gagttggcga ggatgttggc gaggaaaaac atccacaggg aaatcaggag
     5641 cggccattgt gcgaagtcgg tgttggccag cccgtttgcc agtccgatgg agacgaagtt
     5701 gaaggcggtg tagcgcaggg attcggtaaa accggcgtaa tagccggtgt gccacaggta
     5761 cagggcggcg gcaaggatgc tgccggagag cagcagcagc atcgtccggc attcttcgtc
     5821 tttccaatag gttttgaggc tgcggctgtt gagggcggcg aaatggttgg caaaattgat
     5881 gccgccgaca atggtgaaaa cgatgatgac cgcttcgatg aggggggagt tgtaataagc
     5941 tatgctggca tcgtgggtgg aaaacccgcc cagcgagagg gtcgccatcg cgtgacagac
     6001 ggcatcgaac cagcccatcc cggcaaaatg caggcaggct gccgcgagga tggtgatcag
     6061 ggtgtagccg aaccagagtt ttttcgccac ttgggaaatg cgcggcgaca ttttgctttc
     6121 tttgtcaatg ccggggattt cggctttgaa taattgcgtg ccgcctacgc cgagcatagg
     6181 caggatggcg acggcaagga cgatgatgcc catcccgccc agccagttga gcatatgccg
     6241 ccaaaagttg acggaggggg cgagcccgtc gacgtggggg atgacggtcg cgccggtggt
     6301 ggtcagtccc gacatcgatt caaaaaatgc gtcggtaaag cccatattcg ggaaatacag
     6361 gtacatcggc atcgcagcca tagcggcaaa cgccagccac aacatcagga cgagggtgaa
     6421 gccgtcgcgc gggcgcagtt cgcgcctgaa ccggagggtg gcgagccgga cgatgtacga
     6481 gccggaaagg gtaacggtcg cggtggtggc gaaggcggtg tacgcgccgt ccgaaaaggc
     6541 gtaggagagg gcggcgggta tcagcaggat aaaggaaaac agcataccca gtcgggagag
     6601 gacgtgggcg atgggcagga ttttgtgcat agtggggcgg tccgttattt tgcgaagctt
     6661 ttccagtcta tgccgccggc ggcttggact tgggtaattt cttccgtttc gaggttgacg
     6721 gcggtcagct gtccgcccca cagcgcgccg gtgtccagcg agatgacgtt gtcggcattc
     6781 gtgtagccca gcgaggacca gtgtccgaag atgatggtgc ggtcgaggtt ttgccggtcg
     6841 ggggctttga accacgggcg caggtaaggc ggcatttttt tcactgtgga tttgtagtcg
     6901 aaatccagtt cgtttttaaa ggtcagggcg cgcatccgcg tgaaggcgtt gacgatgaag
     6961 cgcaggcggg catagccttc caaaccttcg tcccacgcgg ccggtttgtt gccgtacatt
     7021 ttggagaaga atttgacgta ttttttgccg cgcagttcgg cttcggcttc tctagcgagc
     7081 gattcggctt tggcgatgcg ccattgcggc aggatgccgg cgtgtaccat cacgcggctg
     7141 ccctcgcgta tcaacagcgg ttgcgcacgc agccagtcga gcattttttt tccgtcgggg
     7201 tgtttgagta tgggttcgat tgtgtcgctg cgtttgggcg cgccttcgcc gcagccgaca
     7261 gcgagcaggt gcaggtcgtg gttgccgagg acgatttgca cgctgttttc gtgccggatg
     7321 cagaattgca gcgtttcgag ggatttcggg ccgcggttga cgatatcacc cgtcagccag
     7381 agggtgtccg tgccgtggtt gaagccgatt ttgccgagca gtgaggtcag ttcgtcgaaa
     7441 cagccttgta tgtcgccgat tgcgtaatgt gccattgcag atgttgtgaa gtgggaaagt
     7501 gttgcggttc ggacggcatg gttttgaaat atcatgcagt ccgaacgtgg aattatgcgt
     7561 tcaaaacgag gacggcttcg gcttcgacct gcacgccttt gggcagcgag gcaacgccga
     7621 cggcggcgcg ggcggggaag ggctcggcga taaattccgc catgacttcg ttgaagacgg
     7681 caaaattgcc caagtcggtc aggtaggcgt tgagtttgac gatgtcggcc agcgtgccgc
     7741 ctgccgcttc ggcgacggct tgcaggtttt ggaacacttg gcgcgcttcg gcgcggaaat
     7801 cgccgttgcc gacgacggtc atcgtggcgg gatcgagggg gatttgaccg ctcatgtaaa
     7861 cggtgtcgcc tgctcggacg gcttggctgt acgcgccgat ggcggcgggg gctttgtcgg
     7921 tgtggatgat ggttttggac atttcggatt cctcaaaaaa tagggcggca gaagccgcag
     7981 cattcgggat tatcgtacaa aaccgccggc ttgtgtagtt gcggtggcag aaaacaaaac
     8041 cgccgaaggc tcggcggttt gcagaataag gcgcatatca gaatttgacg cgcataccgg
     8101 cggacagttc gccggaacgg acgtttttga cagtgttgac tttgccgatg tagttgtagc
     8161 ggtagccggc atccaaatcg acattcgggg taacggcata gcttacgccc gccaatacgc
     8221 cgaggccggt ggaggtttgg ctgaagctgt cgctgccgcc caagtcgacg gaggcgcggt
     8281 tgaggctcaa gcgcgcgccg agatacggtt tgacgggcga ttgggtgtcg aagtcgtaaa
     8341 tggcggacgc gccgatgctg taaagtttga aatcggtgga tggggcttta tagtttttgt
     8401 agcgcgtgta atcgacggcg aagcggaggt cgttgatgcg gtagcctgcg gagatgcgcg
     8461 ggctgaagcc tttggcagaa cctaaagagc ttgaggcttt tgcgtgtgcg gcatcggctt
     8521 ggacgtaaaa gctggatgcg ccttccgcca gtgcggcggc cgggagagcg agggcaatca
     8581 gtgcggcaag tgcttttttc atattttggt tcctttatgg tcagttagaa aaattgttaa
     8641 gaatccgtta aagaatcctg ctgtattata cttaaatttt ctttttgcat cgtaatattt
     8701 tcaatacttc aagatacgta gcggtatccg gctgctttgc cgacggcaaa gccgttaacc
     8761 cgcgcgttgc ctttaaatgg tggcggcggc atcacgcggc ggatgggtga aacttgcaaa
     8821 cggtttggaa aaaacagcgg tatctgtcgg attgttgcag gtgcaggcat acggttttgt
     8881 gtgcgtctgt gccttaagcg tcggacattt ccggcggcgg ctgtgccgtc tgaaacgccc
     8941 ggcgggggat gcggctgcgt tttccatcga taagcatatt ttccggacgc gttcggggcg
     9001 ggttttcccg ggcggccgcc gatttgtttg cg
//
LOCUS       DBBZYD010000087         8856 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.087, whole genome shotgun sequence.
ACCESSION   DBBZYD010000087 DBBZYD010000000
VERSION     DBBZYD010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8856
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.087"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(53..247)
                     /locus_tag="ACJJDL_001680"
     CDS             complement(53..247)
                     /locus_tag="ACJJDL_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HGG7574355.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(237..2318)
                     /locus_tag="ACJJDL_001681"
     CDS             complement(237..2318)
                     /locus_tag="ACJJDL_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HGG7574356.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            2794..3174
                     /locus_tag="ACJJDL_001682"
     CDS             2794..3174
                     /locus_tag="ACJJDL_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HGG7574357.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDGGGRGHMPPVQNQAGTDDF
                     RAFSCENGLSVHVRRLDGGRIALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3307..3378)
                     /locus_tag="ACJJDL_001683"
                     /pseudo
     CDS             complement(3307..3378)
                     /locus_tag="ACJJDL_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
     gene            3829..5262
                     /locus_tag="ACJJDL_001684"
     CDS             3829..5262
                     /locus_tag="ACJJDL_001684"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HGG7574358.1"
                     /translation="MNEYSQLIKHPDISLPPVSDGIKVDNPATGETLAFVRKTDSDKL
                     KNLIQKAAAAQKLWAAKTALERADVLWRWYFLIKENKEALARLMTMEQGKGLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALAVLAYEAGVPQDLLPVVSGSASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGTLASKF
                     RNSGQTCVCTNRVYAQSGIYEEFCRKLSEKAAALKLGNGLDEGVNQGPLIEERAVEKV
                     EQHIADALAKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIAAANDTEYGLAAYLYTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCIDVG"
     gene            5372..6160
                     /locus_tag="ACJJDL_001685"
     CDS             5372..6160
                     /locus_tag="ACJJDL_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HGG7574359.1"
                     /translation="MMENGKTASRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALAYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            6528..8084
                     /locus_tag="ACJJDL_001686"
     CDS             6528..8084
                     /locus_tag="ACJJDL_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HGG7574360.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADSQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELAPQLNLPQQQEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            8101..8847
                     /gene="surE"
                     /locus_tag="ACJJDL_001687"
     CDS             8101..8847
                     /gene="surE"
                     /locus_tag="ACJJDL_001687"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HGG7574361.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEQALWTLLAHFFKNPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAVFWHAD"
BASE COUNT         2068 a         2220 c         2562 g         2006 t
ORIGIN      
        1 tataaaaatt ccgtctgaag cggcgttcag acggaatttg tttcaagcag gcttaacagc
       61 agcgtccgcc gtttgcgccg cagcggcgtt tgcggcaata gtcttgaaac tgcagcttgg
      121 tcatcacggg ggcgttggga ttatgtttgc gctgctgtgc aacgtagttt tcataatcgg
      181 gcacgcctgc catcaagttt gccgtcagct tgatggtttt ccaccaagac gcgagcttat
      241 gcttcacttt gtgcctccgg ctgtttgccg tcgcggtaca ccgccgggat ttctttggcg
      301 gtcggccagc cgactttgcg tgctttgagg gcggtacgca aaccgtacgc ggcgacaatc
      361 acgacaaccg acaagaagag gatggtcaga ccggcattaa tcttgtcgtt gaagatgatt
      421 tgcgccattt cgccgatgtc tttggcaggc gcaaggactt cgtttttagc caatgcgtcg
      481 ctgtatttgc cggcgtgggc aaggaagctg atgcgcgggt cgctgtggaa cagtttttgc
      541 aggccggcgt agcaggttac gaacagtacg ccgacggcgg gaacgagtac cacccagaca
      601 taacggtcgc gtttcatctt aatcagcacc acggcgcaca taatcaaggc tacgcctgcc
      661 agcatttggt tggcgatgcc gaacaaaggc cagagcgagt tgatgccgcc cagcgggtcg
      721 gttacgccgg tgtagagaaa gtagccccac aatgccacgg cgaagaaggt cgcaatcagg
      781 ttggcgggga tggagtcggt gttgccgaaa ggtttgtaga agatgctgcc caagtcttga
      841 atcataaaac gtgcgacgcg cgtaccggca tcgacggcgg tcaggatgaa caaggcttca
      901 aacaataggg cgaagtgata ccagaacgcc atcatcgcct cgcccggaat caggcggctc
      961 ataatgtgcg ccataccgac tgcgagggtg ggcgcaccgc ctgcacggga aaggatggtg
     1021 ttttcgccca cttccttagc ggtgtgcaac agggttgcag catcgacagg gaattgcagc
     1081 ttggtggtaa tcacttcggc ggcggtattg gcatccgtac cgatcagggc ggcagggctg
     1141 ttcatggcga agtacacgcc gggatcaagc gatgcggcgg cggcaagtgc cataatggct
     1201 acgaaacttt ccatcaacat accgccgtaa ccaatcatac ggacgtgggt ttcgttttcc
     1261 agcattttcg gcgtggtgcc ggaggaaatc agcgcgtgga agcccgaaac cgcaccgcag
     1321 gcgatggtga tgaagaggaa cgggaacaat gcgcctgaga ataccgggcc ggaaccgtcg
     1381 ataaagtggg ttacggcagg catttgcaaa gtgggattga cgatgacgat gcccaaagcc
     1441 aaggccgcaa tcgtaccgat tttcaggaag gtggagagat agtcgcgcgg agtgagcagc
     1501 agccatacgg gcaatacgga ggcgacaaag ccgtaaatca taatcgccca agtgagctgg
     1561 atgccgtcaa ggtcgaacca atgtccgatg gaacttttcg ccacatcttc gccgtaaatt
     1621 accgccagca tcagcaaaat aaagccgacg atggaaatct cgccgatttt gcccggacgg
     1681 atatagcgcg tgtaaatacc cataaacagg gcaatcggca tagtggcggc gatggtaaac
     1741 gtaccccaag ggctgtgaac cagtgctttt acgacaatca acgccaacac cgccataatg
     1801 atgaccataa tcatcaaaat accgatggag gcaatcacgc cggggacagt gccgagttcc
     1861 tgtttcacaa tatcgcccaa agacttaccg tcgcggcgca tagagacgaa caagaccatc
     1921 atatcctgta ccgcgccggc aaacaccacg ccgaagataa tccacaaagt accgggcagg
     1981 taacccattt gcgccgccaa aaccgggccg accaaagggc ccgcgcccgc aatcgcggca
     2041 aagtggtgtc cgaacaatac gcctttgtgc gtcggaacgt agtccaagcc gtcgttgtgg
     2101 cgttctgccg gagtcaggcg gttaggatcg agccgcatta cgcggttggc gatgtagagg
     2161 ctgtaaaaac ggtaggcgat gcagtaaacg gatatggcgg cggtgaccat ccataccgcg
     2221 ctgacctgtt cgcctcggct gagggccaga gtggtaaagg atgctaagcc gaccagtacc
     2281 actatgcccc aaatgaggaa ggttttgagt gatttcatcg aataaatcct tatctcacac
     2341 tgtcggaata tgcctgaacg gcgggaaacg gatgaccgcc tgccggcacg ggcacaaacc
     2401 ggagtctgaa tgattgacga agtatgaaac agtgcgcttg tcgggatttg tgccttatgc
     2461 ccgcatcaaa cagtgcaggg atgcgggcgc acaaaacgtt aaacgccgaa taggatttta
     2521 acgcaaatta gcacactgat agcggttttt acttggaatt tggaaaaaat ttacattcct
     2581 tcgggcggac aggcgggttt ggacggcatc gtcaggcaaa aggcggtgcc ggaagacggg
     2641 taaagaaggg gcgcgcaatc cggattattg attcatcgcg ggtaaattcc ggttatcggg
     2701 cttgtgtgtt tgcgcgtccg tttatagtat ggcgttgccg cagcttggaa tcagggcggt
     2761 tgtttcatat cttattttta ttggggagct tttatgaata tcaggttttt cgcgctgacc
     2821 gtaccggttt tgtctttggc ggcctgtgcc gtgccggaag cgtatgatgg cggcggacgc
     2881 gggcatatgc cgcctgttca aaaccaagcc ggcacggacg attttcgggc gttttcctgc
     2941 gagaacggtt tgtctgtgca cgtccgccgt ttggacggcg gcagaatcgc gttgcggttg
     3001 gacggcaggc gtgccgtcct ctcttccgac gttgccgcat ccggcgaacg ctataccgcc
     3061 gaacacggtt tgttcggaaa cgcaaccgag tggcaccaga aaggcggcga agcctttttc
     3121 ggctttaccg atgcctacgg caattcggtc gaaacttcct gccgcgcccg ctaaacgggg
     3181 cagcctgttt gaaccgccgt ccggattttt cgggcggttt tttgtgtcgg atttgttttg
     3241 gctgtcggct ggtttcggcg gttttcgggc gtggcggatt atttttcgtt tcgttccggg
     3301 tttatcctat cggcagcggc tcaatgccaa ctttaaacct gctccgattt cttcagggct
     3361 gttatccaat gataaaatat agtggattaa caaaaatcag gacaaggcga cgaagccgca
     3421 gacagtacag atagtacgga accgattcac ttggtgctta agcaccttag agaatcgttc
     3481 tctttgagct aaggcaaggc aacgctgtac tggtttttgt taatccacta taatgtttgg
     3541 atttttgcca tactctacca cacgttgcaa ctgcaatctt tgttccttat atattattaa
     3601 agggctgcat tacttttctt tctaaattac cattgtataa aaagtatttt tcttaaacga
     3661 cagggattgc gcccgctcca tattcagaca ccgcccggat gttgcgctgc ccgatcggat
     3721 gcttcagacg gcatcggaag ggtttgcagt tttggaatat gaagatgata atgtccgcga
     3781 gattgacggc atttgaaagc ggttattccg cataccggag gatacgaaat gaacgaatat
     3841 tcccaattaa tcaagcatcc cgatatttcc cttcccccgg tttcagacgg catcaaagtc
     3901 gataatccgg caacgggcga gactttggcg tttgtccgca agacggattc ggacaagctg
     3961 aaaaacctga ttcaaaaggc ggcggcagcg caaaaattat gggcggcaaa aaccgcgttg
     4021 gaacgcgccg atgtgttgtg gcgttggtat tttttgataa aggaaaacaa agaagcactg
     4081 gcgcgtctca tgacgatgga gcagggcaaa ggcctgaccg aggcgcgcgg cgaaatcgat
     4141 tatgcggctt cgtttgtgcg ctggtttgcc gaagaggcgc ggcggattga cggcgatgtg
     4201 ctgacgagtg tgaaagcgtc gcaaaaactg gtcgtgttga aacagcctgt cggtgttacc
     4261 gccgcgatta cgccgtggaa ctttccgtcc gcgatgattg cgcgcaaggc tgcgccagct
     4321 ttggcagtgg gttgcgcgat gatagtcaaa cccgcgtcgc tcacgccttt gagcgcgtat
     4381 gcgttggccg tgttggctta cgaagcgggc gtgccgcagg atttgctgcc tgttgtcagc
     4441 ggcagtgctt cggaaatcgg ccgtgaattt gccacaaatc cgattatccg caaaatcagt
     4501 ttcaccggct ctaccgaagt cggcgcgaaa atttttgccg acagcgcggc agacattaaa
     4561 aaactcagct tggaactggg cggcaacgcg ccgtttatcg tgtttgacga tgccgatttg
     4621 gacaaagctg tcgaaggtac acttgccagc aagttccgta atagcggtca gacctgcgtc
     4681 tgcaccaacc gcgtttacgc tcaatccggc atttacgagg aattttgccg caaattgagt
     4741 gaaaaagcag ccgcgctcaa attgggcaac ggcttggatg aaggcgtgaa ccaaggaccg
     4801 ctgattgagg aaagagcggt agagaaagtc gagcagcata tcgccgacgc gcttgctaaa
     4861 ggcgcggtct gcctgaccgg cggcaaacgc agcgcgttgg gcggaacgtt ttttgagccg
     4921 actgtcttaa gcggtgtaac agcacaaatg gcggtggcgc gcgaggaaac cttcgggccg
     4981 ttgtgtccag tgttccgttt tgaaaccgaa gccgaagtca tcgcagccgc caacgatacg
     5041 gaatacggtt tggcggctta cctttatacg gctgataccg cccgccaatg gcgcgtcggc
     5101 gaagcattgg aatacggtat ggtcggcatc aatacgggct taatcagtaa tgaagcggca
     5161 ccgttcggcg gcgtgaaacg cagcggtttg ggacgtgaag gcagcaaata cggtgcggac
     5221 gaatatctgg aattgaaata tctgtgcatt gatgtcgggt gacggatgcc gtctgaacag
     5281 caggttttca gacggtgccg catttcaagc agcctttatc tgttgtacaa tgcgccctgt
     5341 ttttacggtt atttttgatt tgaattaaga tatgatggaa aacggaaaaa cagcctcgag
     5401 atggcgtttt gccttgaaaa gtgcgggctg gcacctctta atcagcctgt cggttgcagg
     5461 gctggcggca ttgctggttt ttaaggtttg gtatccttat ccttatgccg agctgacggg
     5521 agggctgtcg ctttatcagc tggtggtggc tgtcgatatc gtatgcggcc cgctgctgac
     5581 tttaattttg gcaagcccga agaaaaagac aaaggcacgc atggtcgatt tttccatggt
     5641 cggcatcatc cagctggcgg ctttggcgta cggtctgcac agcgtttcgc tggcgcgtcc
     5701 tgtggtggaa gcgtttgaac aggatcgtat gaccattgtt acggcggcgg aagtcgtggt
     5761 cgaagatttg cacaaagccc ccgaagggct gcaaagcctg tcgtggttcg gcatccgccg
     5821 cattgcattg aaagaacctg aggatgcgga tgagaagaac aagacgctgg atttgtccct
     5881 gaaaggtatc gagccgagta tgcgtcccga ccggtggctg ccgtattccg acaaggaagc
     5941 agaagaaatc cgcaaacatc tgaaaccgct gaaagtcttg gcggatgcga gaaaaacgac
     6001 ggttgcggac attctgaaac aggcaggtct cgccgaaggg gaggagctgt attacctgcc
     6061 gtttaccagc agcaggcaga aagagtggat agtcattacc gataaagagg gcaacaccaa
     6121 aggctacgcg ccgatagacg gcttcatcat caccccttaa gcgttgggac tccgtccgca
     6181 ctcgaacatc cgttcttcgc ggcggtagaa tcagactgta tttgagagag gcgcaacccc
     6241 tcaatcaggg caacacatag gggaaggctt tatgtgccgt ccgtgtgttg aaacatttca
     6301 aaataagctc atgccgtccg aacatccttt cagacggtat ggcgttttgc cattgccccg
     6361 ataagctgtt aaactattta aattatttcg accgaaggta cacgcacatg caagaccccg
     6421 agcagagcag caagcccgcc cgccgttttt tgtgcgtacc gtctgttcag gcagcttgag
     6481 cgcttcaggc tgccttttcg cgtttgaact tgaggaatac gaaaatcatg gatttcagtt
     6541 ggttggcaga accgcatacc tggataggtt ttgccacgct tttggtgttg gaagtcgtat
     6601 tggggataga caatcttgtc tttgtggcga ttttggcaaa caaggtccag cccgcacggc
     6661 gcgaccgcgc acggattatc gggctggggc tggcagtcgt catccgcatc attatgcttg
     6721 cttttatggc gcacatcatc acgctgaccg agccgctgtt ccaaatcggc ggcctcgccg
     6781 tttccggcaa ggacatgatt atgctcgcgg gcggtatttt cctgctttac aaagccacca
     6841 ccgaactgca tgaacgcctc gaagggcaca accgttttac cgttgccgac agccaaaaaa
     6901 aacacgcgcc gttttggggc gtggtcgcgc aaatcctgat actggatgcc gtgttttcca
     6961 tcgattcggt cattactgcg gtggcgatgg tcgatcatat cgtcgtggcg atgggtgcgg
     7021 tcgtcgtcgc aatggctgta atgatttctg ccagcaaact cttgaccgaa tttgtcgaca
     7081 gacaccctac cgtcgtgatg ctctgccttg gttttttgtt gatgatcggt ttcagcctga
     7141 ttgccgaagc cttccatttc cacattccca aaggctacct ctacgccgcc atcggcttct
     7201 cgattttaat cgaactgttt aaccagattt cccagcgcaa cagccgcaaa aacgactaca
     7261 tcggcagctc gtggcgcaaa cggactgctg aaaatgtctt gggtatgatg ggcatacgcg
     7321 aaagcgtgct tgccgatgcg ggcggcgaat ctggggacga cgcgcatttt gaagaaaacg
     7381 aaaaatcgat gatacgcagt gtgctgacgc ttgccgaacg cccgattatg ggggtgatga
     7441 tcccacgccg cgacatcgaa cggctggaca tttcccaaag ccgcgaagaa cagtatgccc
     7501 aactgcaaaa cacgccttac agccgcctgc tcgttgtcgg aaaggcgggc gtggacgaac
     7561 ctttgggcta catcaacaaa aaagacctgc tgtcccaact gctggaaaca ggcggtctcg
     7621 acattcagac ggcattgcgc cagccgctcg ttttgcccga cagcactacc gcgctgggcg
     7681 caatcgaact cttccgccaa agcagcgcgg attatgcttt ggtggtggac gagttcggcg
     7741 cggtattggg catggtaacc atgaaagacc tgctcgaaac catcgcaggc gagttccccg
     7801 aagaatttga gcgcgaagaa gaaccagccg ttcaggggaa tcccgatgaa agcctgacgg
     7861 tggaaggcgc gttggaatat gtggaactcg caccgcaact caacctgccg cagcagcagg
     7921 aagatgccga tttccatacg gttgccgggc tgattatgga agaattgcaa accatccccg
     7981 atgtcggcga ttttgccgat ttccacggct ggcggtttga agtggtcgaa aaagaagggc
     8041 agcgcatcga gcgggtcaaa atcaccaaat tgcccgaaga ataagcattc aggatagaaa
     8101 atgaacgttt tgatttccaa cgacgacggc tacctctccg aaggtattgc cgttttggcg
     8161 cgcgttacgg cggaatttgc caacgtcagg gtggttgcgc ccgaacgcga caggagcggg
     8221 gtcagcaatt cgctgacgct ggaacgccct ttgcagttga aacaggcgca aaacgggttc
     8281 tactatgtca acggcacgcc gaccgactgt atccacatcg ggcagtctgt attttcggat
     8341 tttcaggccg attttgtctt ttcgggcatc aaccggggcg cgaatatggg ggacgacacg
     8401 ctttattcgg ggacggttgc ggcggcaacc gaagcctacc ttatgggcat acccgctgtg
     8461 gcgttttcct taaacgacgc ttccggacgc tattgggcga ccgcagaaca ggcactgtgg
     8521 acattgttgg cgcatttttt caaaaacccc ccgcagtccc ctattttgtg gaacatcaat
     8581 atccccgccg tcgagccgga agatgtgcgg ggcattaaaa tcgcccgttt gggcaggagg
     8641 catcacggtc agaacgtcat ccccgcgcgc aatccgcgcg gcgaacagat ttattggata
     8701 ggcccggtag gcagggtttc cgacaaagaa gagggaacgg atttcggtga atgcggcgca
     8761 ggtttcatta ccgtaacgcc gctgcaaatc gacctgaccg cctatccgga catggcggaa
     8821 acagcggtgt tctggcatgc ggactgaccg tttcat
//
LOCUS       DBBZYD010000088         8599 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.088, whole genome shotgun sequence.
ACCESSION   DBBZYD010000088 DBBZYD010000000
VERSION     DBBZYD010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8599
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.088"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(177..1073)
                     /gene="argB"
                     /locus_tag="ACJJDL_001688"
     CDS             complement(177..1073)
                     /gene="argB"
                     /locus_tag="ACJJDL_001688"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HGG7574362.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1243..2373
                     /locus_tag="ACJJDL_001689"
     CDS             1243..2373
                     /locus_tag="ACJJDL_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HGG7574363.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDHQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2444..3295
                     /gene="lgt"
                     /locus_tag="ACJJDL_001690"
     CDS             2444..3295
                     /gene="lgt"
                     /locus_tag="ACJJDL_001690"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HGG7574364.1"
                     /translation="MIIHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVIFGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDLEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3378..4040)
                     /locus_tag="ACJJDL_001691"
     CDS             complement(3378..4040)
                     /locus_tag="ACJJDL_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HGG7574365.1"
                     /translation="MDSRKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            complement(4135..5928)
                     /locus_tag="ACJJDL_001692"
     CDS             complement(4135..5928)
                     /locus_tag="ACJJDL_001692"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HGG7574366.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAEAQGRSLDLNAFLQKNESLERTEMTQTNRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGAALQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            6174..7283
                     /gene="proB"
                     /locus_tag="ACJJDL_001693"
     CDS             6174..7283
                     /gene="proB"
                     /locus_tag="ACJJDL_001693"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HGG7574367.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGSALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            7296..8558
                     /locus_tag="ACJJDL_001694"
     CDS             7296..8558
                     /locus_tag="ACJJDL_001694"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HGG7574368.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALFAMADSLEAAAADI
                     LAANRQDLEAAAGNIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYVDKDADLEKAIRIVRNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1936 a         2440 c         2234 g         1989 t
ORIGIN      
        1 taaaatatta atgaagatgc ttcgaaataa cccaatttaa tatttttgct tcctaagccc
       61 ctttgttaat ccactatatt ttttcaggaa tgacggtttg gaaattgccc gaaaccccaa
      121 aaacagaaac cggacaaacg ggttttccgc caaagccggc attttccgac tttgcttcag
      181 gcatcttccc caccgcccaa aatcatcgaa ccgataccgg catcggtaaa gatttccagc
      241 aaaagcgcgt tgggcaccct gccgtcgatg atgtgcgtgg ctttcacgcc gttgacggcg
      301 gcttcgaccg cggaagcgat tttcggcagc ataccgccat acagcgtgcc gtcggcaatc
      361 agttcatcaa tccgtttcgg cgtgagtttg gtcagcagat tgcccgtttt gtccatcaca
      421 ccggcgatat tcgtcatcat caaaagtttt tcggcgttca attcttccgc caatttgcct
      481 gccaccaaat cggcgttgat gttgaacgct tcgccttttt cacctacgcc gacgggggcg
      541 acgacgggaa tgcagccacg ttctatcagc cctttaacca aaccggtatc gatgctttcc
      601 accgtaccga cctgtccgat gtccacgcca ttctgttcgg gcgtatcaat caaaagtttc
      661 ttcgccttaa tgaaatggtc gtcgcgtccg cttacgccga ccgcgtgtcc gccatatgtg
      721 ttaatcatcg acacgatttc tttattgaca tgcccgccca acaccatttc gacaatatcc
      781 atcgcctctt tgtcggtaac gcgcattcct tggacaaact cacccttttt gccgactttt
      841 tcaagcatcg cattgatctg cggcccgccg ccgtgaacga tgacgggatg aatgccgacc
      901 agcttcagca gcacgacatc gcgggcaaac ccttctttca aggcaggttc ggtcatcgcg
      961 ttgccgccgt atttgatgac ggcgaccgaa ccggaaaacc ggcggatgta aggcagcgct
     1021 tcggcaagga tacgcgcctt gtcggcggcg gaaataatgt tttcagactc cataacggct
     1081 ccctattgtt aacaatttcg gcttatgtta acgccaaacg ccgtctgaaa caatcttcag
     1141 acggcatccg gcagactttc gggcaggttg aagccttgcg atacgggcgg taaaatcgcg
     1201 gtttatccgg ttcgagaaac cggcgacagc aaggactttc ccatgattaa aatcagcacc
     1261 cgcttcgatg ccggctcggt cgtcgtcaaa gacctgaccg atccttccaa catccgcctc
     1321 gccctgcgtc ccgacaacgc ctccgatttt gcacaatggt tctacttccg gctgcaaggc
     1381 gcggcatatc aaaactgcat catgcatttt gaaaacgcgg cagaagccgc ctacccgaaa
     1441 ggctgggaag gctatcaggc gtgtgcctca tacgaccgcc gcaactggtt ccgcgtaccg
     1501 acttcctacg aaaacggcgt actgaccgtc aaccataccc cgctgtccaa tagcgtgtac
     1561 tacgcctatt tcgaacccta ttccgaagaa cagcacctca acctcctcgg cgacgcgcaa
     1621 ggcagcggcc tgtgccgcat cgacgacttg ggcagcaccg tgcaagggcg cgacatcaat
     1681 ctgctgacca taggcaatca ggtcgaaagc gatttgaaaa tctggattac cgcccgccag
     1741 catccaggcg aaaccatggc ggaatggttt gtcgaaggac tgctcggcag gctgctcgac
     1801 catcaggatg caaccgcgcg caccctgctc gatcgcgcca cgttctatat cgtccccaac
     1861 atgaaccccg acggttcggc actgggcaac cttcgcacca acgccgccgg tgcgaacctc
     1921 aaccgcgaat gggaaaatcc gactttggaa aaaagccccg aagtgttctt cgtgcgcgaa
     1981 aaaatgctgg aaaccggcgt ggatttgttc ttggacatcc acggcgacga agggctgccc
     2041 tttatctttg ttgcaggaac tgaaggcgtg ccaaactaca atccgcgcat ttccgcgttg
     2101 gaaacacagt tcaaaaccgc ccttttgaac gccagccccg atttccaaga cgaatacggt
     2161 tacgaaaaag atgcgcccgg tcaggcaaac atgaccttgg caacaaactg ggtcggcaac
     2221 cgtttcaact gccttgccta tacgttggaa atgcccttta aagacaatgc caacctgccc
     2281 gacgacgatt tcggatggaa cggtcaacgg tcgttgcgct tgggcgaagc cgcgttgtcc
     2341 gccatcctca acatcatcgg cgatttgcgc tgaaaccctt attgcagaaa tgccgtctga
     2401 agcatcatgc ctttcagacg gcatttgaaa acgaaagcct gttatgatta tccatcccca
     2461 attcgatccc gtcctcatca gtatcggccc gcttgccgtc cgctggtatg ccctaagcta
     2521 catcctcgga tttattcttt ttacctttct cggcagaagg cgcatcgcgc aaggcttgtc
     2581 cgtttttacc aaagaatcgc ttgacgactt cctcacttgg ggcattttgg gcgtaatttt
     2641 tggtgggcgt ttgggttacg tcctgtttta caagttttcc gactacctcg cccatccgct
     2701 tgatattttc aaggtatggg aaggcggaat gtcgttccac ggcggctttt tgggtgtagt
     2761 tattgccata tggttgttcg gccgcaaaca cggcatcggc ttcctcaaac tgatggacac
     2821 ggtcgcaccg ctcgttccgc tgggtctcgc ttcgggacgt atcggcaact tcatcaacgg
     2881 cgaactttgg ggacgcgtta ccgacatcaa cgcattttgg gcaatgggct tcccgcaggc
     2941 gcgttacgaa gacctcgaag ccgccgcgca caatccgctt tgggcagaat ggctgcaaca
     3001 atacggtatg ctgccgcgtc atccctcgca gctttatcag tttgcacttg aaggcatctg
     3061 cctgttcgcc gtcgtttggc tgttctctaa aaaacagcgg ccgaccggac aagtcgcctc
     3121 gctcttcctc ggcggctacg gcatattccg cttcattgcc gaatttgcac gccaacccga
     3181 cgactatctc gggctgctga ccttggggct gtcgatgggg caatggttga gcgtcccgat
     3241 gattgttttg ggtatcgtcg gctttgtccg gttcggcatg aaaaaacagc actgaccgcc
     3301 tgtgaaaaat accgtctgaa acatggaaat ccggtttcag acggcatttt tacgtttggt
     3361 tcatggaaac aaacgcttca attcttaccg caacacgcct tgtattttct gccgctgccg
     3421 cacggacagg gatcgttcct gcctgttttt tcgccttccc tgcggacggt ttgcggcttg
     3481 ttgatgaccg cctgccagta gcggtagata tccgccaatg cataaggcaa ctcggattcc
     3541 agttccgcca gctcgccttc tgtgaattgc agacggatag tgccgttgtc ctcttcgtcg
     3601 taaataccgc ccaatgccat gatgggataa aacaactctt caaacgcttc atcatcgacg
     3661 gcttcaaacc aatcggtcgg cacaatatcc aaaccgtaaa gataagcatt gcaccatgtg
     3721 taaaaatcgc tgccgccgtc ttcgttttca tacagccaca aatcgggcag ttttttatcc
     3781 gacatcgcgg cggttgtttc catcgccatt gccaaaacca gccgttcgat ttcggaacgt
     3841 tcggcggcgg taaattgcga ttcgtcgccc aacacttcgg gcagccagtc gagcggtgtc
     3901 aatttgtccg gcccgctcaa cagcgccgtc ataaaacctt gaacctcgtc gcaacgcatc
     3961 gtgttgcctt gttcgctttt ggcatccaac aattcgctca accgccgttt ggatgcttcg
     4021 gtaaattttc gggaatccat cattttcctt ttcaaatggg ttttgcgccc tattatcgcc
     4081 gcaatgccgt ctgaagcctt tttatgcttc agacggcatc gtctgttttc acgctcaaat
     4141 cgtaccgctg ccttgcgctt tcggtttggc ggcactaaat tccagtttgc tcaaagcgga
     4201 aaggtaggct ttggcggtgg cgaccaaaac gtcggtatcc gcgccctgac cgttgacgac
     4261 gcggttgccg cgcgccagac ggacgctggt ttcgccctgg ctttccgtac cttgcgtgac
     4321 ggcgttgacg gaataaatct gcaaagccgc gccgctttgc gccacgcttt caatcgcttt
     4381 gaaaatcgca tccacggggc cggagcctgt ggcggaagcg cgtttttctt cgcctttgat
     4441 gctgaacacg atgtcggcgc gcggctcttc gccggtttcg gtgctgattt tttgggagat
     4501 gaatttgtag ctctcggcat tcatgctgcc catttcgtcg gataccagtg cgtgcaggtc
     4561 ttcatcgaag atttcgcgtt ttttgtcggc gagttctttg aagcgggcaa acgcggcgtt
     4621 cagtgcctct tcgctttcca actcgatgcc caaatccgcc agcttggttt tgaaggcgtt
     4681 gcggccggac aatttgccca agctcaaacg gtttgttgcc cagccgaccg attcggcgga
     4741 cataatctcg taagtttcgc ggtgtttcag caccccatcc tgatggatgc ccgattcatg
     4801 cgaaaaggca ttggcaccga caatggcttt gttgggctgc acgggatagc ccgtaatggt
     4861 ggacaccagt ttggacgaag gcacgatttg cgtggtatcg atgccggttt ccaagccgaa
     4921 caagtcgtgg cgcactttca acgccatcac gatttcttca accgaagcat tgcctgcacg
     4981 ttcgcccaag ccgttgacag tacattccac ctgacgcgcg ccgcctttta atgcggcaag
     5041 cgaattggca accgccaagc ccaaatcgtt gtggcagtgt gccgaccaaa cgactttgcc
     5101 gccgttgggc gttttggcaa tcagttcgcg gaaaaattct tcggttttgt acgggattga
     5161 atagccgacg gtatcgggaa tattgatggt ggtcgcgccc gcttcaatca ccgcgccgca
     5221 gatttcggca aggaaatcga tttccgaacg caacgcgtct tcgcaggaaa attccacatc
     5281 gtcggtgtat tcacgagcga ttttcaccgc tttgaccgcc gcctcaatca cctgcttcgg
     5341 cttcatcttc aatttgtact ccatatggat ggggctggtg gcgatgaagg tgtggatgcg
     5401 ttttttcggc gcgggcgcaa cggcctcacc cgcctgacgg atgtcccgct cgatggcgcg
     5461 ggacaatgaa cagaccgttg atttggtaat ggttttcgca atcgcattga ccgcctcgaa
     5521 atcgcccggg ctggcagcgg caaaacccgc ttcgatgatg tccacaccca atttttccag
     5581 ctggcgggcg acgcggattt tttcctcttt ggtcatagcg gcgccgggcg actgctcgcc
     5641 gtcgcgcagg gtggtatcaa aaataattac gcggttggtc tgtgtcattt ctgttctctc
     5701 cagagattcg tttttttgta aaaaagcatt caaatccagc gacctgcctt gcgcttcagc
     5761 caacgcggtc agcttttgca gttgcgccag gggcagcgac ccgcgcgtgc gccatttata
     5821 gatggcggcg gtcgtcgcgg cattttcggg atcgtgctgt ttcaacgctt cggcaagcgc
     5881 gttcacgccg ccgaaataag caaccaagcg gtctatatct aattgcatgg tagtccttgt
     5941 ctaaaataaa tcagcctaca gcagaaatat ggacaggatt atacgcattt tggacaaaac
     6001 ggcaatataa atttgaaaaa tctcaataag ccgccataga ttttattaat tttatacatt
     6061 ttgtctattt tatcgcagac gcggcgtgat tgttgacaat tgcggcagaa cagggcaaat
     6121 tcggcggcac aaggcggcaa acgagacagg acaaaccaac aaggacggaa acaatgaaat
     6181 acaaaagaat cgtatttaaa gtcggcacat cttcgattac ccattcggac ggcagtctct
     6241 cgcgcggcaa aatccaaacc atcacccgcc agcttgccgc attgcatcat gcgggacacg
     6301 agctggtctt ggtgtcttcc ggcgcggttg cggcagggtt cggtgcgctg ggtttcaaaa
     6361 aacgtccggt caaaatcgcc gacaaacagg cttccgccgc cgtcgggcag gggctgctga
     6421 tggaagaata tacggcaaac ctgtcttcag acggcatcgt gtccgcacaa atcctgctca
     6481 gccgcgccga ctttgccgac aaacgccgct accaaaatgc cggcagcgca ctttccgtgc
     6541 tgctgcaacg ccgcgccgtc cccatcatca atgaaaacga tacggtttcg gttgaggaat
     6601 tgaaaatcgg cgacaacgac acattgagtg cgcaagtggc ggcgatgata caggcagacc
     6661 tcttggtgct gctgaccgac atagacggtc tttacacggg caacccgaac agcaatcccg
     6721 atgccgtacg gctggacaaa atcgaacaca tcaaccatga aatcatcgaa atggcgggcg
     6781 gctcgggttc ggcaaacggc acaggcggta tgctgactaa aatcaaagcg gcgacgattg
     6841 cgaccgagtc cggcgtaccg gtctatatct gttcctcgct caaacccgat gcacttgccg
     6901 aagcggcaga taatcaggcg gacggctcgt ttttcgtccc ccgtgccaaa ggtttgcgga
     6961 cgcagaagca atggctggcg ttctattccg aaagccgggg cggcgtttat gtggacgaag
     7021 gtgcggaaca cgctttgtcc gaacagggaa aaagcctgct gatgtcgggc attgccggaa
     7081 tcgaagggca tttttcccgt atggacaccg taaccgtgta cagcaaggca accaaacagc
     7141 ccctgggcaa agggcgcgtc ctgttcggtt ctgccgccgc cgaagacctg ctcaaatcgc
     7201 gtaaggcgaa aggcgtgttc atccatcggg acgactggat ttccatcacg cccgaaatac
     7261 gcctgcttct gaccgaattt tagaaaagga aacccatgtc aaacacacaa aaacagcttg
     7321 cccttgccaa agcggcaaaa aaatccgtca acacggcgga tacggaagaa aaaaaccgcg
     7381 cgctgtttgc tatggcggac agcttggaag cggcggcggc agatattttg gcggcaaacc
     7441 gtcaagactt ggaagccgcg gcaggcaaca ttcccgaaag catgaccgac cgccttttgt
     7501 tggacggcaa acgcatttgc gcgatggcgg acggcatcag ggcggttgcc gcgctgcccg
     7561 accccgtggg cgaaatactg gaaacctcga ctttgcccaa cggcttggaa atcgtcaaaa
     7621 agcgcgtggc gatgggcgtt atcggcatta tttacgaaag ccgcccgaac gttacttccg
     7681 atgcggcggc tttggcactg aaaagcggca gcgcggtcgt actccgcagc ggcaaagatg
     7741 cattccaatc cgcacgcgcc atcgttgccg ccctgaaaac ggggttggca caaacccgca
     7801 tcgaccccga cgcgctccag ttgattgaag acaccgggcg cgagggcagt tacgaaatga
     7861 tgagggcgaa agattatcta gacctgctga ttccgcgcgg cggggcgggg ctgatacggg
     7921 cggtggttga aaatgccgtc gtgccggtca ttgaaacggg aacgggcatc gtccacatct
     7981 acgtcgataa ggatgcggac ttagaaaagg caatccgcat tgtccgcaac gccaaaacca
     8041 gccgtccgtc cgtgtgcaac tcgatggaag tgctgctggt acatgaagac attgctgccg
     8101 acttcctgcc caagctcgaa cggctgttgg ttcgcgaccg tatagaagcc ggactgccgc
     8161 ccgtccgctt ccgtttggat ccgcaggcgg cgcggcatat cggcggcgaa gcggcgggtg
     8221 cagacgattt cgataccgag tttttagact acatcctcgc cgtgaaaacc gtcgcttcgg
     8281 tcgaagaggc ggtcgggcac atcgaaaccc acggcacgca ccattcagac ggcatcgtta
     8341 ccgaaaaccg ccacgctgcg gactatttca cgacccatat cgattctgcc gccgtgtatg
     8401 tcaacgcgtc cacgcgcttt accgacggtg gcgaattcgg cttgggttgc gaaatgggca
     8461 tctccacgca aaaactccac gcccgaggcc cgatgggctt gaaagagcta acgagttata
     8521 aatacatcgt acaaggcacg ggacaggtca gggaataatc cgaattcaaa cgtctgatat
     8581 agtggattaa ctttaaacc
//
LOCUS       DBBZYD010000089         8324 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.089, whole genome shotgun sequence.
ACCESSION   DBBZYD010000089 DBBZYD010000000
VERSION     DBBZYD010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8324
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.089"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(151..1083)
                     /gene="cysK"
                     /locus_tag="ACJJDL_001695"
     CDS             complement(151..1083)
                     /gene="cysK"
                     /locus_tag="ACJJDL_001695"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HGG7574369.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1277..1882)
                     /locus_tag="ACJJDL_001696"
     CDS             complement(1277..1882)
                     /locus_tag="ACJJDL_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574370.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1879..2730)
                     /gene="dapF"
                     /locus_tag="ACJJDL_001697"
     CDS             complement(1879..2730)
                     /gene="dapF"
                     /locus_tag="ACJJDL_001697"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HGG7574371.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFIPEHAPIAAWADRFRGIG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     AKGIIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAQVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            2868..3164
                     /locus_tag="ACJJDL_001698"
     CDS             2868..3164
                     /locus_tag="ACJJDL_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574372.1"
                     /translation="MFRILLLLFPCAILVACTRNIPANPTVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3178..3846
                     /locus_tag="ACJJDL_001699"
     CDS             3178..3846
                     /locus_tag="ACJJDL_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7574373.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3919..6039)
                     /gene="pnp"
                     /locus_tag="ACJJDL_001700"
     CDS             complement(3919..6039)
                     /gene="pnp"
                     /locus_tag="ACJJDL_001700"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HGG7574374.1"
                     /translation="MFDKHVKTFPYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYINGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQAAINA
                     INEFADEVNPEVWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWNA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RVGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6276..7139)
                     /locus_tag="ACJJDL_001701"
     CDS             complement(6276..7139)
                     /locus_tag="ACJJDL_001701"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HGG7574375.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKVLEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRAKAVRLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYEVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7338..8213
                     /gene="rfbD"
                     /locus_tag="ACJJDL_001702"
     CDS             7338..8213
                     /gene="rfbD"
                     /locus_tag="ACJJDL_001702"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HGG7574376.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLLSSGY"
BASE COUNT         2020 a         2380 c         1924 g         2000 t
ORIGIN      
        1 aaatatttcc ctcaagcaat gcggcggcac caatgcctga ttaaaacaca accggcgttt
       61 tcggcatata tgcaaaaacg cattttccgg cacggcgtta caccgatacc gaaaaatgcg
      121 tctgaatgtt tcgacaatcc gattaaagca ttatgccaaa tctgcaaaaa gtggcgtaga
      181 gagatagcgt tcgccataag aaggcagcag cacgactatc agcttgcctt cgttttcagg
      241 ctgtttggca agctgcaacg cactccaaac cgccgcaccg gaagaaatac ccaccaaaat
      301 gccttctttt tccgctattg cgcgggcggt ttcaaaagcc gcttcgttcg acactttggt
      361 aatgctgtcg taaattttgg tattcaaaac ggtcggaata aagcctgcgc cgatgccttg
      421 aatcgggtgc gggccttttt cgccgccgct caatacgggt gaagcttcag gctcgacggc
      481 aaccacttta acttcgggtt tgtatttttt caacacttcg cccacgccgg taatcgtacc
      541 gcccgtgccg acgccggcaa cgaagacatc gactttgccg tccgtatccc gccaaatttc
      601 ctcggcggtt gttttgcggt ggacttcggg gtttgcctca ttgtcgaact ggcgcggcat
      661 aaaataagtg tcgggatgcg cgtccaccaa ggatttcgct ttggcaatcg cgcccgccat
      721 accttcggcg gcaggggtca gaatcagctc cgcaccaaac gcgcgcaaca gcattttgcg
      781 ctccttactc atgctttccg gcatggtaat cgccagcttg tagccgcgtg cggcacatac
      841 cattgccaaa ccgacacccg tattgccgct ggttgcttcg acaatgacgg tgtttttgtt
      901 gattttgccc gctttttcgg caccctcgat cattgcttcg gcaatgcggt ctttgacgct
      961 gctgcctgga ttgaaaaatt ccagtttcac ggcaacctcc gccttcaaac cttcggtcag
     1021 acggttcagt ttgaccaaag gcgtgttgcc gattagttcg gtgatgctgt ttgcaatttt
     1081 catcttctgc tcctgaataa taaggtttcg acagtaaggc gcaatcccca taggcatcct
     1141 gtccgattgc aggggatttg cgccgaaaca taaacaaatt tcggatatgg ctttatccta
     1201 aacctatgcc gcctaaaaaa ccaatatcca aaatttcttt ctttataact ttttgttccg
     1261 atacggccgc accgtattat cttccaattt ctgaaagcag cagcaccagt accgagacct
     1321 gcatcaacgc tgccgtcaac ccgccgagtc gcagctgcga gccgccgaac gttgacggcg
     1381 gctgccggtc tataccgcag cggtggacat aggcaaccgc catcagcaca aactgcaaca
     1441 cgaaccaata aaccggcttc agcgcataaa gtttgagcag tgccgcaaac acaaacactt
     1501 gaaccgttcc cgaaaagcaa taatgcacca acgcacatat tccgacaaaa gcaagcgtca
     1561 tcgatacatt actgacggca aaaagcccga gcagcggatg ttcggggtct gcctgccatc
     1621 cgtttccatc cgttttccgg ttccaatgcc cgatgaaaaa aaatatgctg cccaaagtca
     1681 ggtaaaaatg ggggatgaac aagggcgcgg cgcgggtcat tccccatatg ccgggcatca
     1741 gctttgcccc caaaaccgat atgcccagcc acagcataat actcgcccaa aaccattgca
     1801 acattcctgc gcggaatatc agaaacagaa aaaccgccgc atacagtaag gcagacaaaa
     1861 aatccaaatg cagcaaaatc atgaatacgc caactcgcct tcaaacaccg tttccgcagg
     1921 gccggtcatc atcacatcgc cgccgcaggc ccattcgata tataaagttc cgcccggcaa
     1981 aatcacctct accgttttcc cttcatccaa caaccccaga cggatacccg ccaccacagc
     2041 cgcacacgcg cccgtaccgc acgcttgggt ttcgcccacg ccgcgctcga acacgcgcaa
     2101 acgaatcgcg gttcggctga caatctgcat aaagccgacg ttgacgcgtt cgggaaactg
     2161 cctgtgcggt tcgataagcg aaccggtttc gcgcacctgc gcgcattcta cgtcatcgac
     2221 cacaatcacc gcatgggggt tgcccatatt gacgcagctg acaggctgaa tgccggattc
     2281 gagatgcacc ccgtaaatac aggcatcatc cccctcgccc gattcgggga caaacggtat
     2341 ttcagacggc ataaacttcg gtttgcccat attgaccgta accatgccgt tatcggacaa
     2401 tttcggaaaa ataatgccct tggccgtttc aacacaaatt tctttcttat cggtcaaacc
     2461 cttgtctgca acaaaacggg caaaacaacg cgctccgttg ccgcattgcc cgacctcgct
     2521 gccgtcggca ttgaaaatac ggtaacggaa atccacacct tcggtttccg aacgcccgac
     2581 caccaaaagc tggtcgaacc cgatgccgcg gaaacggtca gcccatgctg caatcggtgc
     2641 atgctcagga ataaaatcct gactgaccgc gtcaatcacc ataaaatcgt tgcccaaacc
     2701 gtgcatttta gtaaatttca aagtgttcat attattctga aatcccgtat tatctgttgc
     2761 ttccgaattc cgaaatcccc cgcaccgaag ggaaatgctt ccatctcccg ccgcctgagg
     2821 attaaaatca gccattatac tgtttgttac cccttacaag aaacaccatg ttccgcatat
     2881 tactgttgct tttcccttgt gcaatccttg tcgcctgcac ccgaaacata ccggcaaacc
     2941 cgaccgtttc aaattgcgcg catcttcaaa accgcaccat cctgtatttt gacgcacacg
     3001 gcaaacccgc cgacggcgca gtaaagggcg gattttacaa aattatcgaa atacagggtg
     3061 caaactgcat ccttattcaa gactttaaca gcacgggcaa tgccctcggc ggatcctatg
     3121 tgccggactg ccgcaaatca tcccttttcc cgaaaaatat ttgacttcaa actgcctatg
     3181 aaccacgaca tcactttcct caccctgttc ctgctcggct tcttcggcgg aacgcactgc
     3241 atcggcatgt gcggcggatt aagcagcgcg tttgcgctcc aactcccccc gcatatcaac
     3301 cgcttttggc tgatcctgct gcttaacaca ggacgggtaa gcagctatac ggcaatcggc
     3361 ctgatactcg gattaatcgg acaggtcggc gtttcactcg accaaacccg cgtcctgcag
     3421 aatattttat acacggccgc caacctcctg ctgctctttt taggcttata cttgagcggt
     3481 atttcttcct tggcggcaaa aatcgagaaa atcggcaaac cgatatggcg gaacctgaac
     3541 ccgatactca accggctgtt acccataaaa tccatacccg cctgccttgc ggtcggaata
     3601 ttatggggct ggctgccgtg cggactggtt tacagcgcgt cgctttacgc gctgggaagc
     3661 ggtagtgcgg caacgggcgg gttatatatg cttgcctttg cactgggtac gctgcccaat
     3721 cttttggcaa tcggcatttt ttccctacaa ctgaaaaaaa tcatgcaaaa ccgatatatc
     3781 cgcctgtgta cgggattatc cgtatcatta tgggcattat ggaaacttgc cgtcctgtgg
     3841 ctgtaagccc cattcattcc cgatacccgt aaaaaatacc gtctgaaacc tgttcagacg
     3901 gcactttcac cctaagcgtt actcggcggc attttcctca cgggcaggcg cgtccagcag
     3961 ggctttgatg gacaggcgca cacggcctct gtcatccact tccaatgctt tcacgttcac
     4021 cacctgaccg acttgcaggt agtcaccgac attgcgtacg cgctcgtggg cgatttggct
     4081 gatgtgtacc aaaccgtctt tgcccggcat cacgctgaca atcgcgccga cgttgttgtc
     4141 gaggattttc accacagtgc cttcatacac tttgcccact tccacttcgg cagtaatctg
     4201 ctcgatacgt tttttcgccg catcgccggc ttcttgagtg gtcgcagcaa tggtaatcgt
     4261 accgtcttcg gcaatattga tttccgtacc ggtttcagcg gtaatcgaac ggatggtttc
     4321 gccgccctta ccgataactt cgcggatttt gtcttggttg attttcatcg taaacaaacg
     4381 cggcgcgtgt gcggacaact cttgcgggcc cgcaacggcg gctttcatct gatccaagat
     4441 gtgcagacgc gcttctttgg cctgtgccaa agcgatttgc ataatttctt tggtaatgcc
     4501 ttggattttg atgtccattt gcagcgcggt aacgccttcg gtcgtaccgg ccactttaaa
     4561 gtccatatcg cccaagtggt cttcgtcgcc caaaatgtcg gtcaggacgg caaatttgtt
     4621 gccttccaga atcagaccca tcgcgatacc ggcaacgtgt gctttcaaag gcacgccggc
     4681 agacagcagg ctcaggcagc cgccgcagac ggaagccata gaggaagagc cgttggattc
     4741 ggtaatttcg gagaccacgc gcatggtgta gctgaaatct tcaggtttcg gcaatacggc
     4801 caacaatgca cgtttagcca aacggccgtg accgatttca cggcgtttcg gcgcacctac
     4861 gcgacccact tctccggtag agtacggcgg aaagttgtag tgcagcatga agcggtcggt
     4921 gtattcgccg gacagcgcgt caatgatttg ctcgtcgcgc gaagtaccca aagttgcaac
     4981 cgccaaagct tgggtttcgc cacgggtaaa caatgcggaa ccgtgtgtac gcggcaatac
     5041 gccggtttgg atgttcaaag gacggacggt gcgggtgtcg cggccgtcga tgcgcggttg
     5101 accgtccaaa atttggctgc ggacaacatc ggcttccaag tgtttgaaaa tacctttgat
     5161 ttcgttggcg gccaaagtat cggtttcttc ggtaatcaag gcttctttta ccgcattcca
     5221 agcctcgtcc aatttggcgg aacgcgcttg tttttgacgg attttgaacg cttctttaat
     5281 ggtttcgccg gcaatcccgc ggactttggc aactaattct tcattggttt caggtgcttt
     5341 ccaatcccaa acttccggat tgacttcgtc ggcaaattca ttgatggcgt taatcgccgc
     5401 ctgcatttga tcgtggccgt aaaccaccgc gcccaacatc acgtcttcgg gcaggatttt
     5461 ggcttcggat tccaccatca acacggcttt ggacgtaccg gcgaccacca agtccaattg
     5521 cgatttagcc aattcggctt tagtcgggtt caaaacgtac acgccgttta tataacccac
     5581 gcgtgccgca ccaatcggac cggcaaacgg tacgccgctc aacaccagcg cggcagacgc
     5641 gcccaacatt gcaggaatgt cggaatcgat ttcgggatcg acggacacga ccatcgctac
     5701 gatttggatg tcgtggtaga aaccttcggg gaacagcgga cgaatcgggc ggtcgatcag
     5761 acggctggtc aggatttctt tttcgctttg tttgccttcg cgtttgaaga aaccgccggg
     5821 gattttacct gcggcgtaag tgcgttccaa ataatcgacg gtcaggggga agaagtcttg
     5881 accttctttc acttctttgt tggtggtaac ggcaaccaaa acaacggtgt cgcccataga
     5941 gactttaacg gcagcggcgg cttggcgggc aatttcgccg gtttccaaag taacggtgtg
     6001 gttgccgtat gggaaagttt taacgtgttt gtcgaacatt attgttcctt tcaaaatacc
     6061 gcactgctaa aacactaata atgcacacta aaatccgaat gtgcatagtt agggtttcag
     6121 accgtgcggc aggttgtaaa caagctttca gacgacattt cggacgctga aagcaattgc
     6181 ggattataaa ggcaaccatc cttaaaatcc agtattgata caataaaaag gccgtctgaa
     6241 acatatctct ttcagacggc cttcaaactt aaaaatcaat cctgagtcag caaagtcaat
     6301 gcttcccgat acttctcgac agttttctga atcacatcgg caggcacttt cggcgcaggg
     6361 gcttttttgt tccaaccgct ttgttccagc cagtcgcgga cgaattgttt gtcaaaagac
     6421 ggcggattgg tgccgacttc atattgatcc gccggccaga agcggctcga atcgggagtt
     6481 aatacctcat ccatcagcgt cagcgtaccg tttgtatcca aaccgaattc aaatttggta
     6541 tcgcaaataa taataccgcg cgatttggca tattccgccg cttcggtgta aagccgaacc
     6601 gccttggcgc gcacttcttc cgccaattct ttgccgataa tgcgtccgca ttcttcaaag
     6661 ctgatgtttt catcgtgatc gccgactgcg gctttggtcg atggcgtaaa aatcacttca
     6721 ggcagttgtt gcgcttcctg cataccttcg ggcagccgaa taccgcaaac cgagccggtt
     6781 ttttgataat ctttccaacc gctgcctgcc agataaccgc gcacaatcgc ctctactttc
     6841 accggagtga gctttttagc cacgacggcg cgtttttcta aaactttggc ttcgttttca
     6901 ggcaaaacat cgtaaaccgt ttgaccggta aagtggttgg gcataatatg cgccagtttt
     6961 ttaaaccaaa aattggaaat ctgcgtcaga atctcccctt tgctcggaat cgggtcgtcc
     7021 aaaatcacat caaacgcgga caggcggtcg gaagcgacca tcagcatacg tttatcgtcg
     7081 atttcatata aatcgcgcac ttttccagaa tagatcttta ccaaaccaat ctcactcatt
     7141 tcgccccccc tgaaaatatc ttgaaaatac cgacccgaca cccgacaggt ttgaatcgca
     7201 aaccgatatt ctagccgaag tcggcgcaaa acaataccca tggcacaaaa agccaacccg
     7261 tcaaccgtcg gcaaagtttt ggcactataa taccgacagc aagtcctaca atacactttt
     7321 accaaaggaa atacctcatg agaatcctat tgacaggctc gaaaagccaa ctggcacgct
     7381 gcctgcgcga ccgtcttccg gaagactggg aaaccattgc gacggattcc gcatccctag
     7441 acattaccga tgccgatgcc gtctgcaaca tggtcaaaag tttccaaccc gacgccattg
     7501 tcaacacggc tgcctatact gccgtcgaca aagcggaagg cgatgcggca gcggcatttg
     7561 ccgtcaatgc ttccgccgtt tacaaccttg ccttggcagc acatcgcgcc catgcccgat
     7621 tcatccacat ctcaaccgac tatatctttg acggtaaagg gaaaaggccc tatcaggaaa
     7681 gcgactttac caatccttcc aatgtatacg gacaatccaa aaccgccggc gaactgctcg
     7741 cactgtctgc caatcccgac agccttatcc tgcggacttc ttggctgttt agcgaatacg
     7801 gggacaactt tgtccgcacc atgctgaacc ttgcgcggga acgttccccg ctgtccgccg
     7861 tccacaacca aatcggctgc ccgacctatg ccggcgacct ggctgccgcc atcatccgcc
     7921 ttttgcagca aacgtcgccc gtgcgcggca tttaccacta cgccggcggc aaatccgtat
     7981 cctggtacga atttgcccaa catattttcc aagcggcatc gcaacagcag acatccttcc
     8041 ccgttcccga attgactgcc gtttcagaca aggaatatcc gaccgccgcc cccaggcccg
     8101 catacagcat tttggactgc cgcaaaatcg aaaacgactt cggcatcaaa ccgtcagact
     8161 ggcagaaagc ccttgcacag gtcgtttcca agctgctctc tagtgggtac tagatataat
     8221 gcagcatccg ataaagtaaa gccccgaagt ggcagcttcg gggcttatcg gatagaaagg
     8281 aggcttgaag aaatggcgaa agttatttta ttcctgtttc tttt
//
LOCUS       DBBZYD010000090         8037 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.090, whole genome shotgun sequence.
ACCESSION   DBBZYD010000090 DBBZYD010000000
VERSION     DBBZYD010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8037
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.090"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            445..1758
                     /locus_tag="ACJJDL_001703"
     CDS             445..1758
                     /locus_tag="ACJJDL_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HGG7574377.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILMPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            1979..2136
                     /locus_tag="ACJJDL_001704"
                     /pseudo
     CDS             1979..2136
                     /locus_tag="ACJJDL_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003824008.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2149..3399
                     /locus_tag="ACJJDL_001705"
     CDS             2149..3399
                     /locus_tag="ACJJDL_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7574378.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTERGRIAV
                     MQESEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(3434..4927)
                     /gene="rng"
                     /locus_tag="ACJJDL_001706"
     CDS             complement(3434..4927)
                     /gene="rng"
                     /locus_tag="ACJJDL_001706"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HGG7574379.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEKTQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAASNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            5140..5397
                     /gene="grxC"
                     /locus_tag="ACJJDL_001707"
     CDS             5140..5397
                     /gene="grxC"
                     /locus_tag="ACJJDL_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HGG7574380.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5418..5861
                     /gene="secB"
                     /locus_tag="ACJJDL_001708"
     CDS             5418..5861
                     /gene="secB"
                     /locus_tag="ACJJDL_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HGG7574381.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSSTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            5947..7989
                     /gene="recG"
                     /locus_tag="ACJJDL_001709"
     CDS             5947..7989
                     /gene="recG"
                     /locus_tag="ACJJDL_001709"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HGG7574382.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLQHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV"
BASE COUNT         1688 a         2076 c         2373 g         1900 t
ORIGIN      
        1 attaacaaaa accagtacgg cgttgcctcg ccttagctca aagagaacga ttctctaagg
       61 tgctgaagca ccaagtgaat cggttccgta ctatttgtac tgtctgcggc ttgccgcctt
      121 gtcctgattt ttgttaatcc actataaaat cccacgtgta cggcacgccc cgcgctccgc
      181 aatgataggg gcggtttcgt ttgaatcggc gtaccgggat gaatgccccc gcgccgtccc
      241 gataccggtt tgccggttgt tccgtatcgg ttgccgccgt gaaatgacgg acggatacag
      301 gaatggcggc aggcgtaaat gggaggaaat gaccgattga cttgtttcaa aataaaaaag
      361 tagaatgcaa ggcttatccc gcgtctgtgg gcggttttgc ctgcacggtc ggttttctgt
      421 ttaaaataaa ataaaggaga aatgatgctg acgtttatcg gactgctgat tatcggggtc
      481 atcgtatggt tgctgctgac ggaaaaagtg tcgcccatca tcgcattaat cttgatgccg
      541 ctgtttgggg cgttgctggc ggggtttgat gtatcccaat taaaagaatt ttattcgggc
      601 ggcaccaaat cggtgatgca gattgtgatt atgtttatgt tttccatttt gttttttgga
      661 atcatgaacg atgtggggct gttccgtccg atgataggcg gtttgattaa gctgactcgg
      721 ggtaatatcg tggcagtgag tgtggggacg gtcttggtgt cggtggtggc gcagttggac
      781 ggggcgggtg cgacgacgtt tttattggtc gtccccgccc ttttgccgct ttacaagcgt
      841 ctgcatatga atccttacct gctgtttttg ctgctgactt ccagtgcggg attgattaac
      901 cttctgccgt ggggcgggcc gactgggcgg gttgcaagcg tgttgggcgc agatgtgggc
      961 gaattgtata aacctttgtt gacggtgcaa attatcggtg tagtgtttat ccttgcgctg
     1021 tccctgcttt tgggtgtgcg tgaaaaaagg cggattgtcc gggagttggg cgcgttgccc
     1081 gccgtggcgg atttgataaa gccggtgcct ttgtcggaag aagaacaaaa attggcgcgt
     1141 ccgaaactgt tttggtggaa tgtcctgctg tttttggcgg cgatgagcct gcttttttcg
     1201 ggtatcttcc cgccgggtta tgtatttatg ctggctgcaa cggcggcgtt gcttttgaat
     1261 taccgcagcc cgcaggaaca gatggagcgg atttatgccc acgccggcgg cgcggtgatg
     1321 atggcgtcca ttattttggc ggcaggtacg tttttgggga ttttgaaggg tgcggggatg
     1381 ttggacgcga tttccaaaga cattgtgcat atcctgccgg acgcgctgct gccttatctg
     1441 catattgcca tcggtgtgtt gggcattccg cttgagttgg ttttgagtac ggacgcttat
     1501 tatttcggac tgtttccgat tgtggagcag attacctcgc aggcgggcgt ggcgcccgaa
     1561 gcagcaggtt atgcgatgtt gatcggcagt atcgtcggca cttttgttac gccgctttcg
     1621 ccggctttgt ggatgggctt gggtttggcg aaattgtcga tgggcaaaca catccgttat
     1681 tcgttttttt gggcgtgggg tttgtcgctg gcgatattgg ccagttcgat agcggcagga
     1741 atcgtgcctc tgccgtaaac ggcgaagccg tctgaagccc gaatcgttcc tgtggtctgt
     1801 cgcaggctgc ctgcctgccc gtgtgttgca atcgcgcccc aatgccgtct gaaggcagtt
     1861 gccggcgcgg tttttttgtg ctgcagtttt gaaaaatacc ggcaagcgta aaggccgcta
     1921 aattgcggct aattttgggg tgttagaata ggcacggttt gtctgaaagg gaaagttgat
     1981 gcgtgttttg ctggtggaag acgatgcgat gattgcggag gcggtgtcgg caagtttgaa
     2041 agacggcggc tatgcggtgg attgggtcaa aaacggcgcg cggctgccgc tgcccagcct
     2101 tatgacttga tgctgctgga tttgggtttg ccggggcgga cggtttggat gtttgttccg
     2161 ctggcaatgc ttgcaggtat gttttcctac tacgaaacct tccacgaaac ggaagcgttg
     2221 caggacgacc tgctccgtca ggcggcattg tacgtcgccc ccgattccaa acccgaaact
     2281 ttgcccgagg gcgacggcga tacgcgtatt ttggtacaga tgccgcagca ggaagaccct
     2341 gttgtcagcc tgcctgcgca tctggcggac ggtctgcaca cgcttcaggc ggacggggac
     2401 gacgattatt accgcgtcta tatccgcacg acggagcggg ggcggattgc cgtgatgcag
     2461 gaaagcgaat accgggaaga tttggcggcg gatgcggcac ggcaaagcgt gttgcccctg
     2521 ctggcggcac tgccgctgat gatactgctg accgtgtgga ttacgcacaa agccatgcgc
     2581 cccgtccgca aattgtcgca aagtctcgaa caacgccgaa tcaatgacct gtctgccttg
     2641 agtgtggaca atattcccag tgaaatcaga gggttcgtaa ccgccatcaa cttgcttttg
     2701 aaacgtgcgg atgaagacat ccgccaccgt cagcggtttg tcgccgacgc ggcacacgaa
     2761 ttgcgtacgc cgatgacagc cctttccctt caggcggaac ggctcaacaa tatgtctctg
     2821 ccacccgatg cggcgcggca gtctgccgtt ttgcagcaaa gcatacggcg caacaaacac
     2881 ctgctcgagc agcttttggc actggcgcgt tcgcagtcgg acgaaacccc tttggcgaaa
     2941 acgacattcg gtctgcaaag ccgtttccgc caagtgttgc aggaactgat gccgcttgcc
     3001 ttggaaaaac gtcaggacat tggtgtggcg gtcggaggtg atgtcgaaat atttgccgat
     3061 gaaactgaaa tctatacctt ggttaaaacg tttgttgata acgcaatacg ttataccccg
     3121 tccgaaggca ggatagattt gggtttcaca gacgaaggga aatatcttgc cgtgtgggtg
     3181 gaagataacg ggaacggcat tccggaatcc gaacgcgtcc gcgtcctcga tccgttttac
     3241 cgtattttgg gaacggagca gcaggggacg gggctggggc tgtcgattgc cgacacgcta
     3301 gccaaaaaat acggcggata tttggaactg accgacagcc gcaggttcgg acacggtctg
     3361 ctgatacgcg ccttgttgga caaggaaacc ctgaaataga cagatgccgt ctgaaggctt
     3421 cagacggcat tttttacatc agcacaatat cgtattgttc ctgcgtgtaa gcggtttcga
     3481 ccgccagaga aatcggtttg ccgatgaaat ctatcagcat tgccaaggat tgcgattctt
     3541 cgtccaaaaa caaatcgatg acgttggagg cggcgaggat gcggaaactt tcggcatcgt
     3601 aacggcgcgc ttcgcggacg atttcgcgct ggatttcgta gcacacggtt tgcggcgttt
     3661 tcagacggcc tctgccttgg caggaagggc agggttcgca gaggacttgg tttaagtttt
     3721 cgcgcgagcg tttgcgcgtc agctcgacca gccccaggct ggtaaaaccg tgcagggtaa
     3781 cgcgggtacg gtcgaaggcg agggctttgg caagctcctg caacacggct tcgcggtggc
     3841 tttcctgcgc catatcgatg aagtcgatga tgatgatgcc gccgaggttg cgtagcctca
     3901 attcgcgggc gatggtgtgg caggcttcga ggttggtgcg gaagatggtt tcgtcgaagt
     3961 tgcgtgcgcc gacgaagccg ccggtgttca cgtctatcgt ggtcatcgct tcggtggact
     4021 cgataatcag gtagctgccg aagttgaggt tgacgcgcgg ttgcagggcg cggctgattt
     4081 cctgctcgac gttgtgggtt tcaaacagcg ggcgttcgcc tttgaacaat tctatcctgc
     4141 ccaatgcgcc gtggacgtat tgttcggcaa aacgcgtcat ccgtccgtgg tttacggtgg
     4201 aatcgacgag gattttttgc gtgtcgcagc cgaccatatc gcgcaatacg cgcaaactca
     4261 agggcaaatc ctgataaagc agggtttccg gcggccggat tttcgcctgt tcttggatgt
     4321 gttcccacac tttggtcagg tagtcgatgt cggactggag ctgttcgtcg gtggcgtttt
     4381 cggcgttggt gcggatgatg tagcctcggc aggcattttc cggcaggagc ttgtcgaggc
     4441 gttcgcgcag gctgctgcgt tcggcatcgt cttcgatgcg ttgggacacg ccgatgtggt
     4501 cttcttgcgg aagatggacg aggaaacgcc ccgccagcga gatttgggtg gaaagccgcg
     4561 cgcctttggt gttgatcggg tctttgatga cctgcaccaa aacagactgc ccttcaaaca
     4621 gcatatgttc gatgcgctgg gttttttcgg ggttgcggcg ttgttcgagg acatcgacga
     4681 tgtgtaaaaa cgccgcgcgt tccaagccga tgtcgataaa cgcgctctgc atcccgggca
     4741 gcacgcggcg caccacgccc agatagatat tgccgaccag gctgtgttcg ctgttgcgct
     4801 cgatgtgcag ctcgcagata ttgttttcct ccaacaccgc tacgcgcgtt tcctgcggcg
     4861 tgatgttgac caatatcgtt tcgggcgggc gcgcgatgtc tttggggatg gggagtcctg
     4921 acaacatggt ttttcctgaa aatgtaataa aaatattttg catccgttcc gccgcgcagc
     4981 gcgggtgcaa aaatattttt cacaatgtct atcatacttt aaaaaagaaa ctttgacaca
     5041 ttccgcacat gccgtttgaa cgtgcatctg ttccgcactt gccaaacagg ggaaatgccc
     5101 ctatattgat tatcattgca aaactttcgg aaacccaata tgcagaccgt taccatgtac
     5161 acaggtccgt tttgtcccta ctgcgcgatg gcgaaaaggc tgctgcacgc ggcaggtgtc
     5221 ggacatatcg acgaaatccg tgtcgatgca agccccgaag cctttgccga aatgcagcag
     5281 ctttcgggac agcgcagcgt gccgcagatt ttcatcggcg aaacgcacgt cggcggattt
     5341 accgacctct accgcctcca gcaggaaggc gggctggacg gactgctgaa cccttaaccc
     5401 ccaactagga aaacaaaatg agcgaagaac tgcaacccgt attcagcatc gagcgactgt
     5461 atgtcaaaga cttgtctttg gaagtgccgc acgcgccgca aatctttttg gaacagggcg
     5521 agcccgaagt ggatatgcgc gtttccaccg gcagccaaaa gctggaagac ggctactaca
     5581 acgtggatgt aaccgttacc gtaaccgcca aattggataa cgagcgcacg atgtttttga
     5641 acgaagtaac ccaaagcggc atcttccgtt tggaaaacat ccccgaagaa gatgtgcagc
     5701 tgctgctggg cgtggcgtgt ccgaacatcc tcttccctta cgcgcgcgaa gccgtttcca
     5761 gtacggtaac gcgcgccggc ttcccgcccg tcctgctcgc gccgattaat tttgaggcga
     5821 tttaccaaca acagcaggaa gccgaagccg ccggggcttg attcctgcct gccgatgccg
     5881 tctgaatccg tttcagacgg tatttttgtt ttcggataaa ataggtgcgt tcaaaggaat
     5941 ctgcctatga tgtcgcccga aacccagaaa cagctcaaaa tcaccgatgt ttccgccaag
     6001 aagctcgaca aactcaacct ccataccgcg tgggatttgg tgttgcacct gccgctgcgt
     6061 tacgaggacg agacgcacat tatgccgatt aaggacgcgc cgattggcgt gccgtgccag
     6121 gtcgagggcg aggttatcca tcaggaagta acgttcaaac cgcgcaagca gttgattgtc
     6181 caaatcgccg acggttccgg cagcgtcctt tttctgcgct tcatccactt ttacgccagc
     6241 catcagaaac agacggcggt cggcaaacgc atccgcgccg tgggcgaaat caaacacggc
     6301 ttttacggcg acgagatgat tcatcccaaa atccgcgatg ccgagggcgg cggtttggcg
     6361 gaaagcctca cgccggttta cccgaccgta aacggtttga accagcccac tttgcgccgt
     6421 attattcaga cggcgttgga cgttacgccg ctgcacgaca cgctgcccga tgccctgctg
     6481 tgccgtctga agctgcaaca cctcgccgaa agcctgcgtc ttttgcattc gccgccgccg
     6541 agtttcacga ttcatcagct ttcagacggc acgctgcctg catggcaacg gctcaaattc
     6601 gatgaacttt tggcgcaaca gctttcgatg cgcttggcgc gacagaagcg tatcggcggc
     6661 acggcggcgg cattgggcgg cgacggcaca ttgacccaag ccctgcgcca agccctgccg
     6721 tttgccctga ccgatgcgca agaaaaagtt gtttccgaaa tctgccgcga tatggcgcaa
     6781 acctacccga tgcaccgcct gctgcagggc gatgtcggca gcggcaaaac cattgtggct
     6841 gctttgtctg ctttgacggc tatcgaatcc ggtgcgcagg tggctgtaat ggcgcccact
     6901 gaaatccttg ccgaacagca ttttattaaa tttaaacaat ggctcgaacc tttgggcatt
     6961 gaagttgtcc gcctttttgg cagtttgcgt aaaaaagcca aagacgaagc caaagccaaa
     7021 ctggctgacg gcagcgtcaa aatcgccgtc ggcacgcacg ccctgttttc agacggcgtg
     7081 gcgtttcaca atttgggctt gaccattgtg gacgaacagc accgtttcgg cgttgcccaa
     7141 cgcctcgccc tcaaaaacaa agggcgcgaa gtccatcagc tgatgatgtc cgccacgccc
     7201 atcccgcgca cgcttgcgat gagttttttc gccgatttgg acgtgtccgt catcgacgaa
     7261 ttgccgcccg ggcgcacacc gattaaaacg cgcctcgtca acaacgtccg ccgcgccgaa
     7321 gtcgaaggct tcgtcctcgg cacttgccga aaagggcggc aggcgtattg ggtctgccca
     7381 ttgattgaag aaagcgaaac cctgcaactg caaaccgccg ccgaaaccct cgcccggctt
     7441 cagacggcat tgcccgaact caatatcgga ctggtacacg ggcgcatgaa ggccgccgaa
     7501 aaggccgaag tgatggcgcg gttttcttcg ggggggctga acgtcttggt cgccaccacc
     7561 gtcatcgaag tcggcgtaga tgtgcccaat gccgccctga tggtcatcga acacgccgag
     7621 cgcatgggct tggcgcagct tcaccaatta cgcggacggg tagggcgcgg cgcggcggaa
     7681 agcgtgtgcg tcctcctgtt tgccgaaccc ttgggcgaac tcgccaaagc gcggctgaaa
     7741 gtcatctacg aacacaccga cggcttcgaa atcgcccgcc aagacctcaa tatccgcggc
     7801 ccgggcgagt ttctcggcgc gcgccaaagc ggcgtgccta tgctgcgttt cgccaaactc
     7861 gaagaagacc tgcacctttt ggaacaggcg cgcgaaaccg ccccgatgct gattgagcaa
     7921 aaccccgaaa tcgtcgaagc gcatttggca aggtggcttt ccggcaggga agggtatttg
     7981 ggcgtgtgag caaaatgccg tctgaaatat tagaaaaaaa agtgtaacgg aaatctg
//
LOCUS       DBBZYD010000091         8034 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.091, whole genome shotgun sequence.
ACCESSION   DBBZYD010000091 DBBZYD010000000
VERSION     DBBZYD010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8034
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.091"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(113..691)
                     /gene="grpE"
                     /locus_tag="ACJJDL_001710"
     CDS             complement(113..691)
                     /gene="grpE"
                     /locus_tag="ACJJDL_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HGG7574383.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            875..1693
                     /gene="cysE"
                     /locus_tag="ACJJDL_001711"
     CDS             875..1693
                     /gene="cysE"
                     /locus_tag="ACJJDL_001711"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HGG7574384.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            complement(2050..3561)
                     /gene="ubiB"
                     /locus_tag="ACJJDL_001712"
     CDS             complement(2050..3561)
                     /gene="ubiB"
                     /locus_tag="ACJJDL_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HGG7574385.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
     gene            complement(3596..4060)
                     /locus_tag="ACJJDL_001713"
     CDS             complement(3596..4060)
                     /locus_tag="ACJJDL_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HGG7574386.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLKENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITRRYMELETVVPPEEGEGEGEG
                     ADGEMPEYLELHGGREDDISAPSQPEPPSRNIKLLVFGLLIAFLGYLLGKIF"
     gene            complement(4057..4203)
                     /locus_tag="ACJJDL_001714"
     CDS             complement(4057..4203)
                     /locus_tag="ACJJDL_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574387.1"
                     /translation="MPSERSDGIFTFRKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            complement(4220..4558)
                     /gene="erpA"
                     /locus_tag="ACJJDL_001715"
     CDS             complement(4220..4558)
                     /gene="erpA"
                     /locus_tag="ACJJDL_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HGG7574388.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(4690..5376)
                     /locus_tag="ACJJDL_001716"
     CDS             complement(4690..5376)
                     /locus_tag="ACJJDL_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7574389.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            5564..5836
                     /locus_tag="ACJJDL_001717"
     CDS             5564..5836
                     /locus_tag="ACJJDL_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574390.1"
                     /translation="MKKTGKYLIYTAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            6044..7972
                     /gene="dnaK"
                     /locus_tag="ACJJDL_001718"
     CDS             6044..7972
                     /gene="dnaK"
                     /locus_tag="ACJJDL_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HGG7574391.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
BASE COUNT         2204 a         2220 c         1789 g         1821 t
ORIGIN      
        1 aatgccgtct gaagcccgac aggcgggttc agacggcatt gccgctttac ttcgatcggt
       61 ttatacgcaa aacgcgcttc aggaaataaa tcagattatt ccccagacgc cttcaggctt
      121 ccttctgcgc caccgtaacc atagccgggc gcaacacgcg gtcggacagc gtataaccct
      181 tcttcatcac acccaccacg gtattcggct cctgttcgct tgccaccgcc tgcatcgcct
      241 gatggatatt cggatcgagc ttatcgcccg ctttagggtt gatttccttg atttgcgtag
      301 catcaaatgc tttctgcaac tcgttcaaag tcatctgcac gcccattttc agcgcatcga
      361 aattgccgct ctgatccaaa agcgccattt ccagataatc cttgaccggc agcatttcca
      421 cggcaaactt ctgtccggcg aacttgtgcg tatccgcaat ttcctgctgg tggcggcggc
      481 gcaggttttg ctcgtttgcc aaagcgcgca gctgctcgtc tttcaactgc gcttccagct
      541 cggcaatccg cgcctgcaaa tcctcataag ccggctctgc ggcagcctgt tcctgcacac
      601 cgtccgcatt tcctactgtc tcgacggttt ccaccgcctc cacattttca accgcttctt
      661 cactgttttg ctgctgtgtc tgttcgctca tatcgtatcc cttaaaacaa attggaaatc
      721 aaaatccagt tattacccgc gcaagataag gacattttca agaaacttca agcaaaagca
      781 gagaatttca aattcatttt caaatcccct accgaaaaaa taatatagac ggtaagatac
      841 tgccgaccat atcgattttc aaacgtcatc actcatgaaa aaagaccatt taaacacaac
      901 cggtttcgac ctctggcaca ccatccgcga agaaaccgcg gccgcggtct ccgccgaacc
      961 gatgctggca agttttttgc accaaaccgt gttgcgccac gagtccctcg gctccgtcct
     1021 tgcctaccac ctttccagca aactcggcag cccgattatg gacgtgcgcg cgctgtttga
     1081 aatctaccag caggcgttgg gcagcgacac ccaaatcggc aaatgcgtcg aagcagactt
     1141 aaaagccatc tacgaacgcg atcccgcctg cgacgaatat tcgctgccgc ttttatattt
     1201 caaaggcttc cacgcgattc aggcacaccg catcaaccat cggctgtatc tcgacgggcg
     1261 caaaacgctg gcgtatttcc tgcaaaaccg tatgtccgaa gtattcggcg tggacatcca
     1321 tcccgccgcc cgtttcggat acgggctgat gctcgaccac gccaccggct ttgttgccgg
     1381 cgaaaccgcc gtgttgggca acaatatttc gattttgcac ggcgtaacgc tcggcggttc
     1441 gggcaaagaa ggcggcgacc gccaccctaa aatcggcgac ggcgtgatga tcggcgcaaa
     1501 cgcctcgata ttgggcaata tccgcatcgg cagcaatgcc aaaatcgggg cgggcagcgt
     1561 cgtggtttca gacgtgccgc cgtccatcac ggttgtcggc gtacccgcca aacccgtggc
     1621 gcgatcgctc aaaacaccgt cggcggatat ggatcaaaat atccagttta ccgaaatcga
     1681 ctttatgatt tgaatatccg caccaatgcc gtctgaaacg ccaaacgggc ttcagacgac
     1741 attgcccgct tcaagcctgc gccttgatat gccgccgatg tcggcacttg ccagtcggac
     1801 aaaatgcctt ttattcaata cacccgattc ccacgcaacc ggaaatatag tggattaaca
     1861 aaaatcagga caaggcgacg aagccgcaga cagtacggat agtacggaat cgattcactt
     1921 ggtgcttcag caccttagag aatcgttctc tttgagctaa ggcgagacaa cgccgtactg
     1981 gtttttgtta atccactata accgatttcc ttataaacgg gcggagtcgg gcgatgattc
     2041 ggacaaagcc tatttcaaaa gcaaaatcag cagcaaaaca accgcaatca cagccagcca
     2101 caggctttgc cgctgctgca ctttgaccaa atggatatag gcatcacgca tttcctgctg
     2161 gcggttttca tcaatcaacg cactgatttt gcgcggcaat gaagggatga tttgcgccca
     2221 gtcgggggct tcgtttttga ggttgcgcca aagggcttta gggccgacct gcccgttcat
     2281 ccatttcacc aaaaacggtt tggcggtttt ccacaagtcc aaatcgggat cgagctggcg
     2341 gcccaagcct tcgatgttga gcagcgtttt ttgcagcagc acaagctgcg gttggatttc
     2401 gacattgaag cggcggctga cttcaaacag gcgcatcagc accaagccga aggaaatctg
     2461 cgaaatcggt ttgttgaaca ccggttcgca cacggcgcgg acggcggctt ccaattcttc
     2521 cgcacgcgtg tcggcaggca cccagcccga ttcgatgtgg gcggtggcga cgcgccggta
     2581 atcgcggttg aaaaaggcga ggaaattgat ggcgagataa cgtttgtcgt aatcggtcag
     2641 cgtgccgacg atgccgaaat cgagggcgat gtagcggttg tcggcggcaa ccaaaatatt
     2701 gccggggtgc atatccgcgt ggaaaaagcc gtcgcggaag acctgcgtga aaaagatttc
     2761 cacgccgtaa tcggcgagtt tgtgcaaatc gatgccgtct gctttgagtt tggcgatgtc
     2821 ggcaaccggc gtgccgtcca tccattcgat tgtcagcacg tcgctggtgc agtagtcgta
     2881 aaacaccttg ggcacaatca gcatattgct gttttggaaa ttgcgcccga gctgtccggc
     2941 attggcggct tcgcgcatca aatccaactc gtcgtgcagg tatttgtcga actccgccac
     3001 cacttcgagc ggcttcagac gcctgccgtc tgaaaacaag cgttcgaccc aggccgcgcc
     3061 gaaacgcatc agcgacaaat cctgttcgat aaggggcaaa aggttggggc gcaaaacttt
     3121 aaccgccact cgttcgcccg aatgcaggcg ggctttgtgt acttgggcga tggacgcgct
     3181 ggcgatgggc tcggtttcaa attccgcata cagcttttcg atggactgac ccaacgattt
     3241 ttcgatttgt tcacgcgaaa gccgcgcgtc aaaaggcggc actttgtctt gcagctttgc
     3301 cagttcgacg gcgtaatcgt gcggaatcaa atcggggcgt gtggacaaaa cctgcccgaa
     3361 cttgatgaaa atcggcccca ggctttccaa ggcaaggcgc agacggacag caggcggttc
     3421 gtttttcaat ttggacgact gcggcatcat tttcagcaga gcgcatatcc aaccgctacc
     3481 catcagcgaa gcacacagac ctgccagccg atagcggtaa aaagtcccga caataaccgt
     3541 caggcgtttc aaccatttca tatataaaat cccgaataca gcatttatcg gacaatcaaa
     3601 aaatcttacc gagcagatag cccaaaaagg caatcagcag cccgaaaacc agcagtttga
     3661 tattgcggga cggcggttcg ggttgcgaag gtgcggaaat atcatcttcc cgcccgccgt
     3721 gaagttcaag atattcgggc atttccccat ccgcgccttc tccttcgccc tccccttcct
     3781 ccggcggcac gaccgtttcc aactccatat atctccgggt aataatatcc aaacccaaat
     3841 agctgaaata atcatgcaac tcttcccgtt tcgcccaagt gcatttttcc tcaaccagca
     3901 cttgaggttt ggaatcgagc gattcgatca atccttccgc cttttcctcg ccgagattct
     3961 ccttaaggca ctcccggata agcccgcgat ccacttgggg cgggtaagaa acatatacat
     4021 cgtacaaatc gtttcggtaa tctttactca tctcaatcat aagggaacaa atacgcctga
     4081 taccgttccg cccgttcctt tcgggaaacc cgattcatct tcaaacaatc ggattatatg
     4141 tgaattcatc ccgataatat attttctaaa agtaaaaatg ccgtctgaac gttcagacgg
     4201 catcacacaa accaagcggt catacggaaa acgacgatcc gcaaccgcag gttgtttccg
     4261 cattcggatt gcggatgacg aattgcgaac cctgcaaact ttccgtatag tcgatttccg
     4321 caccgaccag atattgatag ctcatcggat cgaccaaaaa gaccaaaccg tttttctcaa
     4381 tttcaaaatc gtcgtcgttt ttgatttcgt caaaagtaaa tccgtactgg aaacccgaac
     4441 agccgccgcc attgacaaaa acccgcaatt tcaaatcggg attgttttct tcggcaatca
     4501 aatcggcaac tttggcacag cagctgtcag taaaaataat agggctttca tccgacatgg
     4561 tgttattcct taatataata ttttctgcat tctctctcaa acccccttca aaggcaagca
     4621 ggcttcgcct ttgaaaaagg aattgttcca atagataagt ttgaccgcct gcaatttcaa
     4681 gccccaaact caaatcgtcc tgccgaacca ctcgacacgc ccgataatct ccacatcatc
     4741 ggtcaaatcg ttcaaattga tttcaaaagc aggataagcc tcgtttgcag aaatcacatt
     4801 gataatcccg cccggtacaa tctgtaaacg tttaaccagc agattttcat taatccgcaa
     4861 cacatacaga ccgtccctcg gcgtattttc accatgattg accaaaatcg aatcgccgtc
     4921 attcaaaacc ccctccatcg aatccccctt gacggaaatt acagacaggt ttttcgtatc
     4981 gcgggtaaca taattctcaa tccaatgccg tctgaacgcc attgtaaata ccggttcctc
     5041 atgatcgaca aactgcccgt atcccgcagc cgcccgaata tcatatctcg gcacgaagac
     5101 aaactcgtcc gtatcgactt cattgcccaa agtatcgtaa gcaagggatt tttttggggc
     5161 ttcatccgga aacggattac cctccccggt cagcagccaa tcgatactac accccttcaa
     5221 ctgcttgatt tttttcaatg tttcagactt tggcagaccg ccttcattcc atatcctgct
     5281 gaagcccgca atcgtcattt caatatcgga tgcgattttt gcctgcctcg cttcgctttt
     5341 ccataaaaaa accagtctgt ctttaaaggt ttccataaat atccttccac tccccttcat
     5401 tcaatcatct aaagtaaaca tgaaatatat tttaccttag ctatccaaaa aacggaacaa
     5461 ttatgataaa ctaaatttaa attatgattt ttcttactta atacataatt tttcagattt
     5521 ttccataggt ttaatcctga attgacagaa aaaggataga aaaatgaaga aaaccggcaa
     5581 atatcttatc tatactgcgg catttaccgc attctgcttt gccttccaag aaaaccgttc
     5641 tgaagccaaa cagcccgaca tcactttatc cgcatccctg tgcgaacaat tcaacatact
     5701 gaacgccaaa gatatggatg cagaacaagt ctccctttcc aaagaatgcg acatcatcga
     5761 gtcttcacac gactgggaaa aagagtacgg caacttgaac gaacaggaaa tgctcgccgg
     5821 catcgtctac gaataaacct gcctgccatt tgaaatatta tgcttgaatg cattggagcc
     5881 aaatgtatta aatcaaatat aaaaccaata tattcataaa gttatatact tatagccatg
     5941 ctgtagcttg aaacagcccg ccgcccgccc tatttacagc ccatcgggac aaaatgttcc
     6001 aacatatttc tcaaaataag caaaatcaaa taggattatc cacatggcaa aagtaatcgg
     6061 tatcgactta ggtacaacca actcttgttt ggccatttcc gaaaacggtc aaaccaaagt
     6121 tatcgaaaac gcagaaggcg cacgcaccac gccgtccgtt atcgcttatt tggacggcgg
     6181 cgaaatcctc gtcggcgcgc ctgccaaacg ccaagcggta accaacgcca aaaacactat
     6241 ttacgccgcc aaacgtttga tcggccacaa atttgaagac aaagaagtcc aacgcgacat
     6301 cgaatctatg cctttcgaaa tcatcaaagc caacaacggc gacgcatggg taaaagcaca
     6361 aggcaaagag ctgtctcctc ctcaaatttc cgcagaagtc ctgcgtaaaa tgaaagaagc
     6421 cgccgaagct tacttgggcg aaaaagtaac cgaagccgtg attaccgttc cggcctactt
     6481 caacgacagc caacgtcaag ccaccaaaga cgcaggccgt atcgccggtt tggacgtaaa
     6541 acgcatcatc aacgagccga ccgcagccgc tttggcattc ggtatggaca aaggcgacaa
     6601 caaagaccgc aaagtagccg tatatgactt gggcggcggt actttcgata tttccatcat
     6661 cgaaatcgcc aacctcgacg gcgacaaaca atttgaagta ttggctacca acggcgatac
     6721 tttcttgggc ggtgaagact tcgaccaacg cttgatcgac tacatcattg acgagtttaa
     6781 aaaagaacaa ggcattgatt tgaaacaaga cgtcatggct ctgcaacgtc tgaaagaagc
     6841 tgccgaaaaa gccaaaatcg aattgtccag cggccagcaa accgaaatca acctgccgta
     6901 catcaccatg gacgcaaccg gcccgaaaca cttggcgatg aaaattaccc gcgccaaatt
     6961 cgaaagccta gttgaagacc tgattgcccg ctctatcgag ccttgccgca ccgcattgaa
     7021 agatgccggt ctgagcactg gcgacatcga cgacgtgatt ttggtcggtg gtcaaagccg
     7081 tatgccgaaa gtacaagaag ccgttaaaga cttcttcggc aaagagccgc gcaaagacgt
     7141 gaaccctgac gaagctgtcg ccgtaggcgc agcgattcaa ggcgaagtgt taagcggcgg
     7201 ccgcagcgac gtattgctgc tggacgtaac ccctctgtcc ttgggtatcg aaaccatggg
     7261 cggcgtgatg accaagctga ttcaaaagaa caccaccatc ccgaccaaag cgtcgcaagt
     7321 gttctctacc gccgaagaca accaaagcgc agtaaccatc cacgtactgc aaggcgaacg
     7381 cgaacgcgct tctgccaaca aatctttggg tcagttcaac ttgggcgaca tcgcacccgc
     7441 accgcgcggt atgccgcaaa tcgaagtcac cttcgatatt gacgccaacg gtatcctgca
     7501 cgtttccgcc aaagacaaag gcactggcaa agcagccaac atcaccatcc aaggttcttc
     7561 aggtttgagc gaagaagaaa tcgaacgcat ggtgaaagat gccgaagcca atgccgagga
     7621 agataaaaaa ctgactgaat tggtcgcttc ccgcaaccaa gccgaagccc tgattcactc
     7681 tgtgaaaaaa tctttggccg actacggcga caaactcgac gcagccgaga aagaaaaaat
     7741 cgaagccgcg ctgaaagaag ccgaagaagc agttaaaggc gacgacaaag ccgctatcga
     7801 tgccaaaacc gaggcgctgg gcgcagccag ccaaaaactg ggggaaatgg tttacgctca
     7861 agcacaagct gaagcccaag caggcgaaag cgaacaagcc aatgcttctg caaagaaaga
     7921 cgatgatgtc gtagatgccg actttgaaga agtaaaagac gacaaaaaat aattagggcg
     7981 tgtccctaat ttgaataagc ccaaaagagc cctattttaa ccctatattc caac
//
LOCUS       DBBZYD010000092         7962 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.092, whole genome shotgun sequence.
ACCESSION   DBBZYD010000092 DBBZYD010000000
VERSION     DBBZYD010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7962
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.092"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(93..773)
                     /gene="tsaA"
                     /locus_tag="ACJJDL_001719"
     CDS             complement(93..773)
                     /gene="tsaA"
                     /locus_tag="ACJJDL_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HGG7574392.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEVCIELNPKFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            887..1522
                     /locus_tag="ACJJDL_001720"
     CDS             887..1522
                     /locus_tag="ACJJDL_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HGG7574393.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSTKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGRWQVVVNEAACRGIAPETIETAWQEMHSAGAIILKNADEINKYINNQ"
     gene            1559..2527
                     /gene="waaC"
                     /locus_tag="ACJJDL_001721"
     CDS             1559..2527
                     /gene="waaC"
                     /locus_tag="ACJJDL_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HGG7574394.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPICGLDKNSAREGWAALAYVETYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTAPEAGRLKNLEQPYYAALHATSRDSKLWPVENWRALLQKLNEEQQCNIYLPWGS
                     EVEKTRAEQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQTLMDCVAADKG"
     gene            2753..3502
                     /locus_tag="ACJJDL_001722"
     CDS             2753..3502
                     /locus_tag="ACJJDL_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HGG7574395.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIEGGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKTLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            3513..4448
                     /locus_tag="ACJJDL_001723"
     CDS             3513..4448
                     /locus_tag="ACJJDL_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HGG7574396.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEALKN"
     gene            4511..5122
                     /locus_tag="ACJJDL_001724"
     CDS             4511..5122
                     /locus_tag="ACJJDL_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HGG7574397.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGMQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     VLERDLQLDCRLTVSLSLVNYEACVAAWKSTRQIEVNTEKPFE"
     gene            complement(5174..5491)
                     /locus_tag="ACJJDL_001725"
     CDS             complement(5174..5491)
                     /locus_tag="ACJJDL_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HGG7574398.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            5649..6920
                     /gene="purD"
                     /locus_tag="ACJJDL_001726"
     CDS             5649..6920
                     /gene="purD"
                     /locus_tag="ACJJDL_001726"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HGG7574399.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVASGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARIVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPHTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            6954..7556
                     /locus_tag="ACJJDL_001727"
     CDS             6954..7556
                     /locus_tag="ACJJDL_001727"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HGG7574400.1"
                     /translation="MTNVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            complement(7627..>7962)
                     /locus_tag="ACJJDL_001728"
     CDS             complement(7627..>7962)
                     /locus_tag="ACJJDL_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7574401.1"
                     /translation="VNNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIYYRI
                     NHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSRQL
                     KILQDWCGI"
BASE COUNT         2108 a         1571 c         2127 g         2156 t
ORIGIN      
        1 taatccgcta taacttgata ttgcggctta tggcgaacaa acaacagccg tttgttcaac
       61 tgctatgcgg caaaaccgga tttttgcccg atttaaagcg gggttgggga aagatcaata
      121 acggttgcac ggttttcctc gatttgaaat ctgacttcgt aatctgcaat attcatcaca
      181 taaatccgtt cgggaatatt ctgataggcg gggcgcggat cttgggcaat gctttggctg
      241 ataaggtttt tggtgtttgc agataaattt tccgcgccga tgttttcctg ccaaacgact
      301 tccaactcta cgggtttgcc gctgacgaaa ccggatgcgg catcgggttt ggattcgaca
      361 aaggggatat aaggtttgat gtccacaatc ggtgtgccgt ccagcaggtc tgcgccgctg
      421 caatagaggc ggacgggttt gccggtttcg atgcgttcga gtttcaggag cgagagtccg
      481 agatggttgg ggcggtgggg gctgcgcgtg gcgaacacgc ccattttttg tttgccgccg
      541 agccgtggcg ggcgcaccat ttgcgcccag ccttcatcca atacgccgtg aaaaataaaa
      601 cttatccaca cataatcgaa atcttccagc ccgcgcacgc tgtctgcggt gaatttggga
      661 ttcagctcga tgcatacttc tgcggcagag accaaaccgg gctggcgggc gatgccgaat
      721 ttctgtttgt agggcgagcg ggcggtgccg atgggggtaa tggtataagt cataaggttg
      781 tggataagtt ttttggaaaa accttatctt atcacaatcg gttttaccgc ttttgggcag
      841 taatttgtta taatacaggg cattttaatc gcgttgaaat aatgagatga ttgtttccat
      901 tgatgttgat gcacaaaaaa cgtttacgcc actgtgtcct gacgaactgc ccgtgaacga
      961 ggggcatttg attgtcgagg agttgaatgc gcaagccgct ttggcggatt tgcgcgtgat
     1021 gacgaaagat gcgcatcata tggtagcgaa atggcttgtg gataaccctg ttgatatgtt
     1081 gaagccgaca ggtttgcctg atgcggattt gacttgggtg gctcatgcga tggtcggtac
     1141 gcgcggctat gaattattgg acggactgcc ttctaccaaa gaatacgatt attgcgtttg
     1201 gaaaggtgtt gatcctgaat tgcatcctta cggcgcgtgt tttcacgata ttgaggaaaa
     1261 actaagcaca gggctgattg aatggctgcg ttgtcaaaat acggatacgg ttattatcgg
     1321 tgggttagct acggattatt gtgttaaaac aacggttttg cagttactca aaggcggtcg
     1381 ttggcaggtt gtcgtcaatg aagcggcttg tcggggtatt gcgccggaaa ccatcgaaac
     1441 agcatggcag gaaatgcatt ctgctggggc aatcatctta aaaaacgctg atgaaataaa
     1501 taaatatatt aataatcaat aagttaaaat tgtttcacgt gaaaccccct tcctaaatat
     1561 gaaaattttg cttgtccgct tgtctagtat gggcgattta attcacactt tgcccgcaat
     1621 cgaagatttg gcgcgacaat gtcctgatgt agaactgcat tggctatgtg aggctggatt
     1681 tgcagatatt gcgcgcctgc atccgtttgt aaaaaaaatc catgtgatga aatggcggca
     1741 atggcgcaaa catctctttc gggctgaaac ttggcgggaa atgggtcatc tgaaacagac
     1801 tttgcggcag gaagtatttg atttcgtatt ggacagtcaa ggtctgatta aaagcgcgtg
     1861 tttcgccaaa atggcaaaat ccccgatttg tggtttggat aaaaacagtg cgcgcgaggg
     1921 atgggctgct ttggcgtatg tagaaacata cgctgtaccg aagggaaaaa atgccgtttg
     1981 gcgcaaccgt gaactgtttg cccaagtatt tgggtatgta atgcctgaaa cgcaggtatt
     2041 tggcttgact gctcctgagg caggtcgtct gaaaaattta gagcagccgt attatgcggc
     2101 tttgcacgcg actagccgag acagtaaatt atggcctgtg gaaaactggc gggcgttact
     2161 gcaaaagttg aatgaagaac agcaatgcaa tatttacctg ccttggggaa gtgaagttga
     2221 aaaaacgcgt gccgaacaga ttgcagacgg actgccgttt gctattgtgt gcgacaaaat
     2281 aaatttattg caggcagcgt atctgctgaa atacgcggtc ggaattgtcg gcgtggatac
     2341 cggtttgctg catttggcaa atgccttgga aaaacctgtg gtcggcattt ataccgatac
     2401 cgatccgatt aaaacaggcg ttcaggtttc gccaattgca aaaaatttgg gcaatatcgg
     2461 gcagattccg accgcagatt tggtttatca aacgttgatg gattgtgttg cagcagacaa
     2521 aggctaaagg gttgtctgaa actgatatag cacctgatat ttttcagttt gttaagcata
     2581 agaatgtata tctaccagcc tgagtaaatg ctttaaaaat ggtataatcg gcaagcatta
     2641 tccgaaagat ttttgaatga attcgttttt aaggaaaacg gatttggttt tatagggaag
     2701 aaggtttggt ttcgctggat ggtgaaagca gcgttctttt taggagggtt caatgaaagc
     2761 actggtcgca gtaaagcgcg tagtggacta caacgtcaaa gttcgtgtaa aagccgatgg
     2821 ttcggatgtg gatatcggca atgtcaaaat gtcgatgaat ccgtttgacg aaatcgctgt
     2881 ggaagaagct gtccgtttga aagaagccgg aaaagtaagc gaaatcgtag cggtttcttt
     2941 gggtgagaaa aaatgcgaag aaaccttgcg tacagctttg gcgatgggtg ccgaccgtgc
     3001 cattcatgtt gaaaccgata ctaaactgga gtctctggcc gttgctaagt tgctgaaagc
     3061 cgttgcggac aaagaaaatc cgcaaatttt ctttttgggc aaacaagcga ttgatgatga
     3121 tgccaatcaa gtggcgcaaa tgctggcagc tttgctgaat gcggcgcaag gtacgtttgc
     3181 ttcaaaagta cacattgaag gtggtgaagt acagattgtg cgcgaaattg atggcggcga
     3241 agaaaccata gcattaaaac tgcctgctgt tatcagtgct gatttgcgtt tgaacgagcc
     3301 gcgctttgtc aaactcccca atattatggc ggcaaagaaa aaaactttgg aaaaactgac
     3361 tcctgacgat ttggttgccg acatttcacc tcgtttgaaa acggtgaaat ttgccgaacc
     3421 taaggcgcgt caggcaggcg taaaagtagc aagcgttgcc gaattggttg aaaaattgaa
     3481 aaacgaagcc aaagtgattt gaggaggctg aaatgagcgt attgattatt gtcgaacacg
     3541 acaacaaaca gttgaatcct accactttgc atgctgttac cgctgccgct aagctgggta
     3601 aaatcgattt attggttgcc ggaagcggtg catctgctgt agtagagttc gcaaaacaag
     3661 tggcgggtgt ggaaaaagtt ttggttgcag atgctgccca ttatgccgaa ggtttggctg
     3721 aagagttggc tccgctggtt gtcaaattgg cagcggatta ctgctatgtt gcagcaacgg
     3781 caactacatt cggtaaaaac cttttgcctc gcgtagcagc cttattagac gtaccgcaaa
     3841 tttctgattt gaccgaaatt gtggataaca cgacttttgt gcgccccatt tatgcgggta
     3901 atgcatttga aaccgtgcaa gctgattcag aaaaattggt gctgaccttc cgtgcgacgg
     3961 tttttgacgc agtggcggcg caaggtggta atgctgaggt aattaatgtt gaagcaaccc
     4021 ctgcccaaaa cctgagccgt tttgttaacc gtcagctttc ccattccgat cgtcctgaac
     4081 tgactcaggc aaaagtgatt gtttccggtg gtcgtgcgtt gggtagtgcg gaaaaattca
     4141 atgaagtgct gacaccgttg gcggatgttt taggtgcggc aatcggtgca tcccgtgcgg
     4201 cggttgatgc cgaatatgcg ccaaacgatg ctcaagtcgg acaaaccggt aaagtggttg
     4261 cgccgcaact ctattttgca atcggtattt caggtgcgat tcaacacgtt gccggtatgc
     4321 aagacagtaa ggtgattgtt gcaatcaata aagatgctga tgcgccgatt ttcaatgtag
     4381 ccgattacgg attggttggc gatttatttg aaatcgttcc acaattaaca gaagcattga
     4441 aaaattaatg tttcacgtga aacgttcaga cgaccttgtt attaatgagg tcgtctgaaa
     4501 acatttcagc atgattacga cttataaaac cattacttcc tcgacgcagg ctgagtttaa
     4561 agataaaggc agccgtttta ttgcatttgc ctatccgatt cggacattgg ctgatgtgaa
     4621 aaaatacctc gatccgttaa aggaagagca tcataaagca cgacactggt gctatgccta
     4681 tcgtttgggt gtggatggca tgcaatttcg tgccaacgat gatggagagc catcaggaag
     4741 tgctggacga ccaattttgg gacagattga ttcggtgggt attaccgacg ttttggtcgt
     4801 ggtcgtccgc tatttcggtg gtactttgtt aggtgttcca ggtctgatac atgcgtacaa
     4861 agaggcgacg gctcaagcgt tggcagttgc agaagtagtt gaaaagaata ttgaaaaaac
     4921 tgtttggctg aaatgtgaat atccgttttt gaatgaagcg atacgcattg ctaaacaata
     4981 tcaggcggat gtattggagc gggatttgca gttggattgc cgattgacgg tcagtttgtc
     5041 gttggtaaat tatgaggcct gtgttgcggc ttggaagagt acacggcaga ttgaagtaaa
     5101 tacggaaaag ccttttgaat gaaaggtcgt ctgaaatgct ttgtgatggt atttcagacg
     5161 acctcttcgc tgactaatct tcttgtgtat atttgtctaa ggcatcgacg ctggagcgca
     5221 aatataacca agccagttga tggaattcgc ccagcgcgtt ccatagtgca tcttcactca
     5281 taatgctgta ttcgccttct gtgcgcaaat ccacctccgc tccatcttca atagcccgat
     5341 gacaagcctg atattcgtgg gtataaaaat tgtccatatc gcgaatcaaa gcgacggcat
     5401 gtttccaacg gcggatgtct tcttccaatt gcggtagtaa atgacaccat tcgcggtatt
     5461 tgctttggat ttcatcaata cgtttttgca tggttgcttg tcctttttta atttatgaat
     5521 aagttgaata ggttgcagag tggaatgaag cggtcttttg tttgattcta ctaaaatttc
     5581 ttcagatggg ataaaagtcc ctttgtatcg agttttcgtt aaaagtacat atttgtcaag
     5641 gagatggcat gaaactgctg gttatcggta atggcggtcg cgaacacgcg ctggcttgga
     5701 aattggcgca gtcgcctaaa gtggaaacag tatttgttgc gtctggtaat gccggtacag
     5761 cgattgaacc caagctgcaa aacatcgact tgactgcgca tcaggatttg attgaattct
     5821 gtcgtaaaga aaatattgtt tttaccgtcg tcggccctga agcgcctttg gcggcaggtg
     5881 ttgtggatga tttccgtgct gcaggactaa aaatattcgg tccgacacaa tatgcggcgc
     5941 agttggaaag ttccaaagat ttcgccaaag catttatggc gaaatacaat attccgaccg
     6001 cgcaatatca aacctttgaa aacgccgatg ccgcacatga ttacgtcaat cagaaaggtg
     6061 cgcctatcgt tatcaaagcc gatggtttgg cggcaggtaa aggcgtgatt gtggcgatga
     6121 ctttggatga agcgcatgct gcgattgatg atatgctgct ggacaacaaa atgggcaatg
     6181 ccggcgcgcg tattgtgatt gaagatttcc tgcaaggcga agaagcgagt tttatcgtca
     6241 tggttgatgg caataatgta ctgcctatgg caaccagcca agaccacaag cgtcttttag
     6301 acggcgacaa aggtctgaat acgggcggta tgggtgcgta cagccctgcg cctgtggtaa
     6361 cgcctgttgt gtacgaacgc gcgatgaatg aaattatttt gccgaccgta gcagggatga
     6421 aagcggaggg gcatgagttc accggtttcc tgtacgcagg tttgatgatt gatcaaagcg
     6481 gtgcacccca tacgattgag tttaactgcc gtttcggcga tcctgaaacc cagccgatta
     6541 tgagccgact gaacagcgac ttatcggatt tggttgaagc ggcaatagac ggcaaactcg
     6601 atagcgtaac cgcggaatgg agcccgcaaa ctgccgtggg cgtggtactg gcggcgcaaa
     6661 attaccccga aacgcccaaa aaaggcgatg ttatttccgg tctggatgct gccaaccaag
     6721 taggcaaagt tttccatgca ggtacaacgg caaacgagaa aggtgacgta ttgaccaacg
     6781 gcggacgcgt attgtgtgtt gtgggattgg gcgataatgt ggcgcaagcg aaagctaagg
     6841 catatggcgc gttggaaaaa atcagtttcg acgggatgca ataccgtaaa gacattgccg
     6901 ataaagcgat taaccgttaa ttagaaagag gatgatgccg tctgaagcca agtatgacta
     6961 atgtgcttca gacggtattt tatattatgt tatttccgag aattatcgca gcatcagcgc
     7021 aacgtaagtt aagcgtttat ttgaaaaaag gtggtttggt cgcttatccg accgaatctt
     7081 gttatggctt ggggtgtctt ccgacattag ccaaagcact cggtaagttg gcgcatttga
     7141 aaaaaagacc gcaacacaag ggtatgattg tcatcgggaa tcaatttgaa caattgcagc
     7201 ctttacttca aatgccgtct gaaaatcttc aggatatgct tagaaaagaa tggcccgccc
     7261 ctaaaacgtt cctattatcc gccaaatcct gtgtcttacc cgagttacgc gggaaacagc
     7321 gcagcaagtt ggcggtcagg gttcccgccc atgtaggtgc gcgccgcttg tgtcaggctt
     7381 tgcaaacgcc tttggtctcg acttcgtgca accgcgcagg caaacgcgcg tgtcggacgg
     7441 agagggaagt cagaaggcaa ttcggacgcg atgtgtggat tgttggtggg agaatcggca
     7501 ggcagaaatc gccgagtcag attattgacg gggaaacagg taaacgtttg cgttagatat
     7561 gggtacttga atgaaaactt ttttgcatac acaaagaaaa aattttgggg ctgtactaga
     7621 ttagccctaa atcccacacc aatcctgtag gatttttagc tgccgggacg gtgtgccgaa
     7681 gttaaatcga aattcgcatt ctttcaagaa cagcgggaaa gatttgcgat cgattccatt
     7741 gtattttcgc aagacacgtt ttgcctgatt ccaaaaattc tcaatgccgt taatgtggtt
     7801 ctgacggtct gcaaattcct tggaatggtt gatgcggtaa taaatgaaac cgctcacgtc
     7861 caacttgtcg cagctgctca gactatcggt ataaacaata ctgtccggca tgattttctt
     7921 tttgatgaca gggagtaacg tttcagactt ggcattgttt ac
//
LOCUS       DBBZYD010000093         7958 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.093, whole genome shotgun sequence.
ACCESSION   DBBZYD010000093 DBBZYD010000000
VERSION     DBBZYD010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7958
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.093"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..187
                     /locus_tag="ACJJDL_001729"
     CDS             <1..187
                     /locus_tag="ACJJDL_001729"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574402.1"
                     /translation="NYKVFLPPVKISLDIPNILCYTFQFVRRFCSSEEPNYTPTGKNG
                     QCFQWDFFGEIRHVAVG"
     gene            complement(317..733)
                     /gene="dksA"
                     /locus_tag="ACJJDL_001730"
     CDS             complement(317..733)
                     /gene="dksA"
                     /locus_tag="ACJJDL_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HGG7574403.1"
                     /translation="MAKLTEQDILNWNGPEDDYMNDEHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(880..1689)
                     /gene="proC"
                     /locus_tag="ACJJDL_001731"
     CDS             complement(880..1689)
                     /gene="proC"
                     /locus_tag="ACJJDL_001731"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HGG7574404.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRE
                     RLQKELGVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLPVDTL
                     SRYIGGTRRIVRVMPNTPGKIGLGVSGMFAEAEVSETDRRIADRIMKSVGLTVWLDDE
                     EKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1720..2127)
                     /locus_tag="ACJJDL_001732"
     CDS             complement(1720..2127)
                     /locus_tag="ACJJDL_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HGG7574405.1"
                     /translation="MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQEGFDCLKKQGLRRNGLSERVRW"
     gene            complement(2127..2813)
                     /locus_tag="ACJJDL_001733"
     CDS             complement(2127..2813)
                     /locus_tag="ACJJDL_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HGG7574406.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGRKPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVALAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNTAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2933..3976
                     /gene="pilT"
                     /locus_tag="ACJJDL_001734"
     CDS             2933..3976
                     /gene="pilT"
                     /locus_tag="ACJJDL_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HGG7574407.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            4139..5365
                     /locus_tag="ACJJDL_001735"
     CDS             4139..5365
                     /locus_tag="ACJJDL_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HGG7574408.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5651..7801
                     /gene="yccS"
                     /locus_tag="ACJJDL_001736"
     CDS             5651..7801
                     /gene="yccS"
                     /locus_tag="ACJJDL_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HGG7574409.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQENVANAYEALGSYLEAKADFFDPDEAEWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKIAERLKSGETADDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT         1959 a         2619 c         1724 g         1656 t
ORIGIN      
        1 gaattataaa gtatttcttc cgcctgtcaa gatatctctc gatatcccca acattctgtg
       61 ctatactttt cagttcgtcc gccgcttctg cagcagcgaa gaaccgaact atacgcccac
      121 agggaaaaac ggtcaatgct ttcagtggga tttttttggg gaaattcgtc atgtcgctgt
      181 cggataaggt ttttttattt tcgccaaacg ctgcaccacc tccaacaatc ctttcctctc
      241 cctcctctga ctggtgcgcc tttgtgaata tactgtctga aacttagggc ttcagacggc
      301 attttgtttg ccgccatcag tcggcaaact gttttttcat cctctctcgg cgttcttggg
      361 actcaacaga taaagtggct gtcgggcgtg ccagcagccg cttcagaccg ataggctctc
      421 ccgtatcggc acagaatcca taatcccctt catcaatatt gcggatggtc gcctgtattt
      481 tactgagaag ttttcgttcc cgatcgcggg tacggagttc caatgcgtac tcttcttcct
      541 gtgtggcacg gtcggcagga tcgggggctg attcgtgttc ttggagatgc cctgtcgtag
      601 cggaagcatt ttcgatgagt tcgtcttgca tttttaccag caattcgcgg aaaaaagcca
      661 aatgctcgtc attcatataa tcgtcttccg gcccgttcca attcaaaata tcttgttctg
      721 tcagctttgc cataatgtat atcctctcgg ttcaccgaaa aaaacaaagc accacaaagt
      781 ggctttattc ctttgatttt tataaggctt attgcctagg gcgtttttga aaacgcgcat
      841 cataacacgt tttggattgg tttttttatt ttctttacat tattgatatt gccgttccat
      901 ttcctgcgaa cggcgcacac aggcacaaac gccctcgctt atggcttcgg cgacacgatg
      961 ccgcctgaaa gcttccacgg cttcgtgggt tgtcccgcct tttgacgtta catttttttg
     1021 aagcttctcg aaatcttcac ccgtctgctc ggcaagggca accgctcctt taaacgttgc
     1081 cagactgagc gcgcgtgctt ctgccatatc aaacccttgt cggatggcgg cattttgcaa
     1141 tgcgtccagc agataaaaca cataagccgg tccgctgccg ctgataccgg taatgccgtg
     1201 cattttttcc tcatcatcca accaaacagt caaaccgact gatttcatga ttcgatcggc
     1261 aatcctgcgg tctgtttccg atacttccgc ttcggcaaac ataccggata cgcccagccc
     1321 gatttttccg ggtgtattcg gcataacccg gacaatgcgg cgtgttcccc caatgtaacg
     1381 gctgagcgta tcgaccggca atccggctgc gacagaaagc accaatgcgc cgttggtgcg
     1441 gatatttttg cacgcggctt ccatatcctg cggcttgacg gcaaggatta aaacatcgtc
     1501 ggaatgaagc tccggcaagg tttcagaagt ttcgaccccc aactcttttt gcaaacgttc
     1561 gcgcttttcc gcaccccggt tggcaatatg gatgcggtaa ccgccttgtt tgaccaatcc
     1621 gcccgcaacg gcagccgcca tattgccgcc gccgagaaaa taaacattca ttatttctac
     1681 cctattcaaa attacctgac taaattcatt cccaattttt taccatcgga cgcgctcgga
     1741 cagaccgttg cgccgcaacc cctgcttttt caaacaatca aaaccttcct gtttgaacgt
     1801 ctcaatcaaa ggtttgccgt cacgcgtacg ccaatccaac ccgcaggctt caaacttccc
     1861 tattttcctg taaaagtaag attgttgtgc ggattcatat tcgtttgccc tgacggaacg
     1921 attgccgtct gaaagcggta tctcgtagtc ctctaaagac ggcggactct cgccgccaat
     1981 atcccaaaaa tcgatggcgg caggttttct cggcttacac cagccggaca gggacgaaca
     2041 ctcataccaa cctgccaacc ggcagcctgc aaccgtaaat gcaagcaacg cagccattgc
     2101 cgtatatttt attgcccgaa tttccatcag ccccttttcc cgaaaatcgc actgccgata
     2161 cggacatgtg ttgcaccgca ctcaatggcg gcaggcatat cgtccgacat ccccatagac
     2221 agcacgtcag ccttaacgcc agccgtattg aggtcggcaa gcagtttccg catcgtttga
     2281 aattgcacct tcaactccgt ttcactgctg ttggctttgg caacacacat cagtccgcgt
     2341 acgacgatat tcggcagctt cgccacttcc acagcaagcg cgactgcttc ttcgggcgcg
     2401 acaccgtgct tcaccgcctc gcccgcaatg ttcacctcaa tacacacctg caaaggcggc
     2461 attgaggaag gacgttgccc gctcagccgg acagcggttt tcagacggca tacggtatgc
     2521 acccaatgcg cgcgttcggc gacaaacttg gttttgttgg actgcacatc gccgatgacg
     2581 tgccacacga tgtcggtcaa atccgccaac tcttccgttt tgccgtacca ctcctgaata
     2641 tagttctcgc cgaaatcacg ctgtccggcg gcgtaaactt cgcggatgcc gtctgaaggg
     2701 aaagtcttac cgacggcaat caggctgacg gaatgcggct tccttcccgc ctgcagaacc
     2761 aattttccaa tacggtcgga cacctcccga taacgttctt gcaacaccgt catagattat
     2821 cccctaatta aaaatgatta aacagttgaa acccctccag tcagggcggt acaatcaagg
     2881 ttgttagaac cattccaacc aatcgaaaca ttatactaaa cagagccgca ttatgcagat
     2941 taccgactta ctcgccttcg gcgctaaaaa caaagcatcc gaccttcacc tgagttcggg
     3001 catatcccct atgattcggg ttcacggcga tatgcggcgc atcaaccttc ccgaaatgag
     3061 cgcggaagag gtcggtaata tggtaacttc ggtgatgaac gaccaccagc ggaaaatcta
     3121 ccagcaaaac ttggaagtcg acttctcgtt cgaactgccc aacgtcgccc gattccgcgt
     3181 caacgccttc aacaccggcc gcggtcccgc cgccgtattc cgcaccattc ccagcaccgt
     3241 cttatcgctg gaagaattga aagccccgag cattttccaa aaaatcgcag aatcgccgcg
     3301 cggcatggta ttggttaccg gccctaccgg ttcgggcaaa tcgaccacgc ttgccgcgat
     3361 gatcaactac atcaacgaaa cccagccggc acacatcctg accatcgaag acccgatcga
     3421 attcgtccac caaagcaaaa aatccctgat taaccagcgc gagctgcacc agcacaccct
     3481 cagcttcgcc aacgcgctgc gttccgcatt gcgcgaagac cccgacgtta tccttgtcgg
     3541 cgagatgcgc gacccagaaa ccattggctt ggcactgacc gccgccgaaa ccggacactt
     3601 ggttttcggc acgctgcaca cgaccggcgc agcaaaaacc gtcgaccgta ttgtggacgt
     3661 attcccggcg ggagaaaaag aaatggtgcg ctctatgctg tccgaatcgc tgaccgccgt
     3721 catctcccaa aacctgctga aaacgcacga cggcaacggc cgtgtcgcct cgcacgaaat
     3781 cctgattgcc aaccccgccg tccgcaacct catccgcgaa aacaaaatca cgcagattaa
     3841 ctccgtcctg caaaccgggc aggcgagcgg tatgcagaca atggaccaat cgctgcaatc
     3901 gctggtgcgc caagggctga tcgcaccgga agtcgcacgc agacgcgcgc aaaacagcga
     3961 aagtatgagt ttctgacaca caaccgcctt ccggccatac cggcgggaaa acaaggcgca
     4021 aacacgcggg gcgggacgca gcatcccgcc cggctacctt tccgaacaag aagcgtccgc
     4081 cttcctgttg aaacctgccg ccgcaaactg caaggcttaa accgaaaaga agctaacgat
     4141 gaataccgat aacctgcacg acatcttgga cgaaatggtt caagtgtatt ctcaaaaaaa
     4201 acaaagccga tccgaaaccc cggccgaaat cggcgcacac ttccacccgc tgctcgaccg
     4261 cctgtgcgaa accgcagaag cacaaaacgc gtccgacatc cttatcagca aaggattccc
     4321 gccctcgttg aaaatcaaca gcgcattaac cccgcagccg caaaaggcgc tgacgggcga
     4381 ggaaaccgcc gccatcgccg catcgacgat gaacgccgaa caatcggaaa tattccggcg
     4441 cgacggcgaa atcaactact ccgtccagtc gcgcagcggc acgcgctacc gcgccaacgc
     4501 ctaccacagc caaggcagcg caggtttggt tttgcggcgc atcaaccacg tcatcccgca
     4561 aatgcaggaa ttgggcctgc ccgaaaaact caaagacctc gccgtcgcac cgcgcgggct
     4621 gctgattatc gtcgggccta ccggttcggg caaatccacc acgatggcga ctatgctcga
     4681 acaccgcaac aaaaccctgc ccagccatat cgttaccatc gaagacccga ttgaatttat
     4741 ctacaaaccg cgccgctgca tctttaccca gcgcgaaatc ggcgtcgaca ccataaactg
     4801 gcagacggcg gtacaaaacg ctatgcgcca atcccccgac gtggtctgca tcggcgaagt
     4861 ccgcagcagg gaaagtatgg aatacgcgat gcagctcgcc caaaccggcc acctgtgcat
     4921 ttttacgctc cacgccaaca ccgcgccgca gtcgctcgaa cgcatactca acttctaccc
     4981 caaagaacag cacaaccaaa tactgatcga catcgccctc aacctgaccg gcatcatctg
     5041 ccaacgcctc gccctcaaac aagacaaaac gggcaggacg gcggttgtcg acttgctcat
     5101 caacacgccc gccatccaag acttcatcct gaagggcgac ctgatgaaca tcagtaaaat
     5161 catggaaacc gccaaaaccg acggaatgca gacgatggat caaaaccttt tcgaactgta
     5221 ccgtcacggc atcatcagtt acgaagaagc cctgcgccag tccgtttccg ccaacaacct
     5281 gcgattgcac atccaactgc acaaagaagg caaaacgccc gaactccttt acgacagggt
     5341 caacggtctc aacctcattt cctgatccgc aaaacccaat gccgtctgaa aaccgcatcc
     5401 ccgttttcag acggcatgat tttatccgcc ccattcatgt gctacacttt atagtggatt
     5461 aaatttatag tggattaaca aaaatcagga caaggcgacg aagccgcaga cagcacaaat
     5521 agtacggaac cgattcactt ggtgcttcag caccttagag aatcgttctc tttcagctaa
     5581 ggcgaggcaa cgccgtactg gtttttgtta atccactata ttcacttcat aacaataaac
     5641 cggtaaaacc atgaaaaccc cactcctcaa gcctctgctc attacctcgc ttcccgtttt
     5701 cgccagtgtt tttaccgccg cctccatcgt ctggcagcta ggcgaaccca agctcgccat
     5761 gcccttcgta ctcggcatca tcgccggcgg ccttgtcgat ttggacaacc gcctgaccgg
     5821 acggctgaaa aacatcatcg ccaccgtcgc cctgtttacc ctctcctcgc tcacggcaca
     5881 aagcaccctc ggcacagggc tgcccttcat cctcgccatg accctgatga ccttcggctt
     5941 taccatttta ggcgcggtcg ggctgaaata ccgcaccttc gccttcggcg cactcgccgt
     6001 cgccacctac accacactta cctacacccc cgaaacctac tggctgacca accccttcat
     6061 gattttatgc ggcaccgtac tgtacagcac cgccatcatc cttttccaaa tcatcctgcc
     6121 ccaccgcccc gttcaagaaa acgtcgccaa cgcctacgaa gcgctcggca gctacctcga
     6181 agctaaagcc gactttttcg atcccgacga agccgaatgg ataggcaacc gccacatcga
     6241 cctcgccatg agcaacaccg gcgtcatcac cgccttcaac caatgccgtt ccgccctgtt
     6301 ttaccgcctt cgcggcaaac accgccaccc gcgcaccgcc aaaatgctgc gttactactt
     6361 tgccgcccaa gacatacacg aacgcatcag ctccgcccac gtcgattatc aggaaatgtc
     6421 cgaaaaattc aaaaacaccg acatcatctt ccgcatccac cgcctgctcg aaatgcaggg
     6481 acaagcctgc cgcaacaccg cccaagccct gcgcgcaagc aaagactacg tttacagcaa
     6541 acgcctcggc cgcgccatcg aaggctgccg ccaatcgctg cgtctccttt ccgacggcaa
     6601 cgacagcccc gacatccgcc acctgcgccg tcttctcgac aacctcggca gcgtcgacca
     6661 acaattccgc caactccagc acaacggcct gcaggcagaa aacgaccgca tgggcgacac
     6721 ccgcatcgcc gccctcgaaa ccggcagcct caaaaacacc tggcaggcaa tccgtccgca
     6781 gctaaacctc gaatcaggcg tattccgcca tgccgtccgc ctgtccctcg tcgttgccgc
     6841 cgcctgcacc atcgtcgaag ccctcaacct caacctcggc tactggatac tgctgaccgc
     6901 ccttttcgtc tgccagccta actacaccgc caccaaaagc cgcgtccgcc agcgcattgc
     6961 cggtaccgta ctcggcgtaa tcgtcggctc gctcgtcccc tacttcaccc cgtctgtcga
     7021 aaccaaactc tggattgtca tcgccagtac caccctcttt ttcatgaccc gcacctacaa
     7081 atacagtttc tccaccttct tcattaccat tcaagccctg accagcctct ccctcgcagg
     7141 tttggacgta tacgccgcca tgcccgtacg catcatcgac accattatcg gcgcatccct
     7201 tgcctgggcg gcggtcagct acctgtggcc cgactggaaa tacctcacgc tcgaacgcac
     7261 tgccgccctt gccgtatgca gcaacggcgc ctatctcgaa aaaatcgccg aacgcctcaa
     7321 aagcggcgaa acggccgacg acgtcgaata ccgcgccacc cgccgccgcg cccacgaaca
     7381 caccgccgcc ctcagcagca ccctttccga catgagcagc gaacccgcaa aattcgccga
     7441 cagcctgcaa cccggcttta ccctgctcaa aaccggctac gccctgaccg gctacatctc
     7501 cgccctcggc gcataccgca gcgaaatgca cgaagaatgc agccccgact ttaccgcaca
     7561 gttccacctc gccgccgaac acaccgccca catcttccaa cacctgcccg aaaccgaacc
     7621 cgacgacttt cagacagcac tggatacact gcgcggcgaa ctcgacaccc tccgcaccca
     7681 cagcagcgga acacaaagcc acatcctcct ccaacagctc caactcatcg ctcggcagct
     7741 cgaaccctac taccgcgcct accgacaaat tccgcacagg cagccccaaa acgcagcctg
     7801 aaaaagtttc ggcattttgt aagagagggc agattgtcag acaggttgca agatagtgga
     7861 taaagctttg cgcagggtaa atgcgtagca actgaaccgt cattcccacg aaaacagaaa
     7921 accaaaaaca gaaacctaaa atcccgtcat ttccacga
//
LOCUS       DBBZYD010000094         7901 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.094, whole genome shotgun sequence.
ACCESSION   DBBZYD010000094 DBBZYD010000000
VERSION     DBBZYD010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7901
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.094"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..108
                     /locus_tag="ACJJDL_001737"
     CDS             <1..108
                     /locus_tag="ACJJDL_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HGG7574410.1"
                     /translation="VPKKAETISNKLFFTHHPKRQTEFAVRQIRQARAE"
     gene            234..1529
                     /gene="hisS"
                     /locus_tag="ACJJDL_001738"
     CDS             234..1529
                     /gene="hisS"
                     /locus_tag="ACJJDL_001738"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HGG7574411.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            1530..2159
                     /locus_tag="ACJJDL_001739"
     CDS             1530..2159
                     /locus_tag="ACJJDL_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HGG7574412.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFS
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            2313..3770
                     /gene="der"
                     /locus_tag="ACJJDL_001740"
     CDS             2313..3770
                     /gene="der"
                     /locus_tag="ACJJDL_001740"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HGG7574413.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEKEEEEAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            3801..4700
                     /locus_tag="ACJJDL_001741"
     CDS             3801..4700
                     /locus_tag="ACJJDL_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HGG7574414.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLEWFSEGF
                     AAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAASLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            4752..5168
                     /locus_tag="ACJJDL_001742"
     CDS             4752..5168
                     /locus_tag="ACJJDL_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MORN repeat-containing protein"
                     /protein_id="HGG7574415.1"
                     /translation="MLKHLAFLLPAMMFALPAASAVLTSYQEPGCTYDGGVGKDRLPS
                     GKGIWRCRDGRGYTGSFKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIKEVKLPKNK"
     gene            5234..5800
                     /gene="dcd"
                     /locus_tag="ACJJDL_001743"
     CDS             5234..5800
                     /gene="dcd"
                     /locus_tag="ACJJDL_001743"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HGG7574416.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEICETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(5864..6568)
                     /locus_tag="ACJJDL_001744"
     CDS             complement(5864..6568)
                     /locus_tag="ACJJDL_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HGG7574417.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEAVQDTMSA
                     RLQVAAEGRDKNAVNAEFVKKFNKFIRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDELNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAILRFK
                     ARADKLSGILGTSGYKIVKLNLGHIGSHIAGEGAAQAKMLRAMPMAASYGVEGTDSAA
                     PGVEEISISVNGTVQF"
     gene            6714..7901
                     /locus_tag="ACJJDL_001745"
                     /pseudo
     CDS             6714..7901
                     /locus_tag="ACJJDL_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT         2101 a         2175 c         1898 g         1727 t
ORIGIN      
        1 gtgccgaaaa aagccgagac aatttcaaat aaattgtttt tcacacatca tcccaagcgg
       61 cagacagagt ttgcagtccg acaaatcagg caagcacgtg cagagtaagt caaatgccgt
      121 ctgaaaactg tttcagacgg cattttaccc gtccgcaaac cacccccaac ctcacaaacc
      181 cttaaaaatc cgctataatc gcccgcaatt tgatttaagc attcttactt gaaatggcac
      241 aaaaaatcca atccgtcaaa ggcatgaacg accttctgcc tgtcgagcaa aaagatttca
      301 aactgacggc tgcgttttgg caggcgtttg aggatacggt aaaccgctgg acgcgcgctt
      361 acggctatca gcaaatccgt acgccgattg tcgagcaaac cggtttgttt gtccgctcca
      421 tcggcgagga aaccgatgtg gtcggcaagg aaatgtacac cttttccgat tcaaacgatt
      481 ctttgagttt gagcctgcgt ccggaaggta cggcttcttg tctgcgtgcg gtggtcgaac
      541 acaaccttct gtacaacagc ccgcaaaagc tgtggtatat ggggccgatg ttccgccgcg
      601 agcgtccgca aaaaggccgt tatcgtcaat tccatcaggt cggtatcgag gctttgggtt
      661 ttgaagggcc ggatatcgat gcggaaatca tcgcgatgtc tgccgacttg tgggaaaaat
      721 tgggtatccg cgaatacctg actttggaaa tcaacagctt aggcaaccgt gaggagcgag
      781 cggcacaccg tgcggcgttg gttgaatatt tgacacgcta tgaagataaa ttggacgaag
      841 acagcaaacg ccgtctgaaa accaatcctt tgcgtgtttt agatacgaaa aaccctgatt
      901 tgcaggaaat ctgcaacgcc gcgccgcgtt tggtggatta tttgggcgag gcttcgcaaa
      961 accactatgc acgcttcaag gcgatgttgg acggtttggg tatccaatat attgaaaatc
     1021 cgcgcttggt tcgcggtttg gattattaca atcagacggt ttttgagtgg acgaccgaca
     1081 aactcggcgc gcaggcaact gtgtgcggcg gcggccgtta cgatggtttg attgaggaac
     1141 ttggcggcaa acctgcgccg tccatcggct ttgcgatggg catcgaacgg ctgctgcttt
     1201 tggtgagcga atacggctcg ctggaagtga acgctgcgcc tgatgtctat gcaatgcacc
     1261 aaggcgaaag ggcggacttg caggtgatga aatacgcgca agccttgcgc gcgcaaggtt
     1321 tcaatgtaat gcagcattcc ggctatcaaa gcctgaaagc gcaaatgaaa aaagccgaca
     1381 acagcggcgc gcgctttgcc ctgattgtcg cgcaagacga actggcgaac ggtacggtta
     1441 cgctcaaaga catgaacggc gcacacggtc agcaaactgt cgccgccgag gatttaaccc
     1501 atactttaca acaatggaag aacgcataaa tggcagccca tctcgaagaa caacaagagt
     1561 tagacaactt taaatatttt tggaaaacca cgggcaaatg gctgtttgcc ctgctgattt
     1621 tggcagcact cggctacttg ggatacacgg tttaccaaaa ccgtgcggct tcccaaaatc
     1681 aggaagcggc ggcggtgctg gcaaacatcg tggaaaaggc gcaaaacaaa gccccgcaaa
     1741 gcgaaattaa tgccgaattg accaaactcc aacaaagcta cccgcattct atttccgccg
     1801 cccaagccac gctgatggcg gcggcaaccg aatttgacgc gcagcgttac gatgttgccg
     1861 aaggccattt gaaatgggtg ttgtccaacc aaaaagacag cctgattcaa gcgttggcgg
     1921 cgcagcgtct gggcgttgtg ttgttgcaac aaaaaaaata cgatgccgcg cttgccgcgc
     1981 tcgacacgcc ggttgaagcg gacttctccc ccctgctgat ggaaaccaaa ggcgatgtct
     2041 atgccgcaca gggaaaaagc caggaagcct taaaaaacta cggtcaggct ttagaaaaaa
     2101 tgcctcaaga ttctgtcggt cgtgaattgg ttcaaatgaa actcgattcg ctgaaataaa
     2161 tgccgtctga aatgccgtcc attatttatc agacggcatt ttaccctccc tctttatggc
     2221 ctcttgccgt gaagaaccta tttaccgtgt ccaacggaca cctgctcgtg ttcagttctc
     2281 ccgaacggca cttgacacag aaagactcaa tcatgaaacc aaccatcgcg cttgtcggcc
     2341 gccccaacgt cggcaaatct actttattca accgtttgac gcgcaccaaa gacgcactcg
     2401 tacacgacct gcccggcctg acccgcgacc gccattacgg acacggcaaa gtcggcagca
     2461 aaccttattt ggtcatcgat accggcggtt tcgagccggt tgtggacagc ggcattttgc
     2521 acgaaatggc aaaacaaacc ttacaggctg tcgatgaagc cgatgcggtt gtgtttttgg
     2581 tggacggccg taccggtctg acgccgcaag ataaaatcat tgccgaccgt ttgcgccaaa
     2641 gcccgcgccc cgtttatttg gccgtgaata aaggagaagg cggcaataga gccgtgcttg
     2701 ccgccgagtt ctacgaactt gctttgggcg acccttatgt tatttcaggt gcgcacggtg
     2761 acggcgtgta ttatctgatt gaagatattt tggaaacctt ccctgagcct gaaaaagaag
     2821 aggaagaggc gaaacatcct gtttttgccg ttatcggtcg tccaaatgtc ggtaaatcaa
     2881 ccttggtaaa cgccattctc ggcgaagagc gcgtcatcgc cttcgatatg gcaggtacga
     2941 cgcgcgacag tatccatatc gatttcgagc gcgaaggcaa accgtttacc atcatcgata
     3001 ccgcaggtgt gcgccgtcgc ggcaaagtgg atgaagcagt ggaaaaattc tccgttatca
     3061 aagcgatgca ggcggttgaa gcggcaaacg tcgctgtttt ggtattggac gcgcagcagg
     3121 acatcgccga ccaagatgcg acgattgcag gtttcgcttt ggaggcaggc cgtgctttgg
     3181 tggtggcggt caataaatgg gacggcatca gcgaagaacg tcgcgagcaa gtgaaacgcg
     3241 atatcaaccg caaactgtat ttcctcgatt ttgccaagtt ccactttatt tccgcattga
     3301 aagagcgcgg tatagacggt ttgtttgaca gcattcaggc tgcctacaac gcggcgatga
     3361 ttaagatgcc gacgccgaaa atcacgcgcg tattacaaag cgcgatcgag cgtcagcaac
     3421 cgccgcgtgc cggcttggtg cgtccgaaaa tgcgttatgc ccaccaaggc ggcatgaacc
     3481 ctcccgtaat tgtggtacac ggcaattcgc tgcacgcgat ttccgacagc tatacgcgct
     3541 atctgaccca aacgttccgc aaagccttca atctgcaagg cacgccgctc agaattcaat
     3601 acaatgtttc ggaaaacccg tatgaaaatg cggaagacaa accgaagaaa aaaccgctgc
     3661 gccgcgtcag cctgagcaac cgtattgaga aacgcgaagg ccgcaaagaa gagaaaaacc
     3721 gcttcaagaa gaaaaccaaa gtcagtgtga aaaaacaatt cagcaaataa ttcccgacat
     3781 ttcaaacaat aggaaacatt atgtggttca agcagattag tttttatccg ctcaacaaag
     3841 aaaagctgcc tgaggcagac gtacttgccg acaaacttgc tgaagctgaa tttacccatt
     3901 gccaaggctt agagtggttc agcgaaggct ttgccgcacc ggtttcgttc tctcccgaac
     3961 tcgttttccc tgccgacttt accttgcgcg tcgccctgaa aaaagaagaa aaagtcctgc
     4021 ctgccggcgt catccgcgat attttggaag agaaggtggc ggaaatccaa aacaatgaag
     4081 cccgcaatgt cggtcgcaaa gaaaaacaag agcttaaaga gcaaattaca gacgacctgc
     4141 tgccccgagc gtttacccgc agcagccgta cagaagcggt gtttaacacc cgccacggct
     4201 acctgctcgt caataacgcg gcttccgcca aagcagaaaa catcctgacc aagctgcgcg
     4261 aagctttggg cggtttggaa gcctcgctgc cgaataccaa acaatcgccc tcttctctga
     4321 tgaccggctg gctgttgcaa gggcattgcg aaggcggttt tgaattggac agcgattgcg
     4381 aactcaaagg tacgggcgat attgttcccg tcgtcaaagt atccaaacaa gatttaaccg
     4441 ccgacgaagt ggttcaacac gtcaaaaacg gtaaaaccgt aacccagctc ggtttggttt
     4501 ggcgcgaaca aatcgccttt atcctcactc aagacttcac actcaagcgc atccaatacc
     4561 tcgacgtatt gcaggaagaa gccgaaagca acggcgacga tgccgccagc cttgccttcg
     4621 cctcgcaaat cctgatggct gaatccgtca gcaccatgtt ggaagagctg gtttcctatt
     4681 tgggcggctg gcaagattga tttttcagac ggcttttata ccgtcagcca aaatccaatg
     4741 gaataaccct tatgcttaaa catctcgcat tcctactgcc cgccatgatg ttcgccctcc
     4801 ccgccgcgtc cgccgttctg acttcctatc aagaacccgg ctgcacctac gacggcggag
     4861 tcggaaaaga caggcttcct tcaggcaaag gcatatggcg ttgccgggac gggcgcggtt
     4921 ataccggttc gtttaaaaat ggcaaattcg acggacaagg cgtttatacc gttgccgcca
     4981 accgcgaaat atttatcgaa ccgttcaatt ccgacagtac caaattccgc aacatggtac
     5041 tctcgggcac gttcaaaaaa ggcttggcac acggcagatt taccgtctcg caaaacggcg
     5101 aaaccctctt cattatgaaa tgcgaaaacg gcatgattaa agaagtgaag ctgcccaaaa
     5161 acaaataagc cccgttttca gacggcatcc cccaatgctt tgtccgaaca ctgcaagaaa
     5221 caaggaaaac attatgagca tcaagtccga caaatggata cgccgcatga gcgaagaatt
     5281 cggcatgatc gaccctttcg agccgaacca aatcaaagaa gccgacggca aacgcatcat
     5341 ctcctacggt acgtccagct acggctacga catccgctgc gccaacgaat ttaaaatctt
     5401 caccaacatc aacagcacca tcgtcgatcc caaaaacttc gacccaaaaa acttcgttac
     5461 cgttgaagac gactgctgca tcatcccgcc taattccttc gcactggcgc gcacggtcga
     5521 atatttccgc atcccgcgca acgtcctgac cgtctgcttg ggcaaatcca cctacgcccg
     5581 ctgcggcatc atcgtcaacg ttaccccgtt cgaaccggaa tgggaaggct acgttaccct
     5641 cgaattttcc aacaccaccc ccctgcccgc caaaatctac gccggcgaag gcgtggcgca
     5701 agtcctcttc ttcgagagcg acgaaatctg cgaaacctca tacaaagacc gcaacggcaa
     5761 atacatggga caaaccggcg taaccctgcc caaagcctga aatataaatg ccgtctgaac
     5821 ccttatcgtc gggtttcaga cggcatttgc cgttcacctc aaatcagaac tgaaccgtcc
     5881 cattgacgct gatgctgatt tcctccacac ccggcgcggc ggaatccgta ccctccacgc
     5941 cgtaacttgc cgccatcggc atggcacgaa gcatttttgc ctgagcagct ccttcacccg
     6001 cgatatggct gccgatgtgt cccaaattta atttgacgat tttataaccg gacgtaccca
     6061 atatgcccga caacttgtct gcacgcgcct tgaaacgcaa aatagcatct ttactgacct
     6121 gatcgatgac ctcgtttcgg cgttcgcgcg acacatggaa atccgtatat tccaatgcgg
     6181 catctgcctg aacatcggca ataaaacggt ttaactcatc aaaatccctc ccttcgacct
     6241 taaattccgc acgctcctcc caacctgttt gaatgcgtct gccgttggta tattgatagc
     6301 gcggcatcgc actgcgcgat accaattcgg ttttaaagct accatttttc gattttctga
     6361 tgaacttgtt gaatttttta acaaactcgg cattgacggc atttttgtcc cgtccttccg
     6421 ccgccacctg taaacgcgcg gacattgtat cctgaaccgc ctcgacaccg gccgattcgg
     6481 aaaattcgac aatattgtaa ttcaatgctt cagccgctgc cggaaaagat accgccaata
     6541 gggaagccgc caaaatagaa cgcagcatat ccgtatcctt acttataaaa ccgccaatct
     6601 agcatatcgg cgcgctaaat tgcgttagcg taaggcaaca atttaaatat tcggtctgcg
     6661 tctgtcttat aataaccgcc tttccgatac ggaatcccac tatgcccaaa cccttgcacg
     6721 tcctcgtcat cccctcatgg tatccgcaat ccgaacagga tgtggacggg atttttttca
     6781 aaatcaggca ctggcattgc agaggaaagg catcaaaacc gccgtgcttg caccgatgtt
     6841 ccgctacttg cggaaagaaa cagcaagcat cctgaccgac cttacggttt tgcaaaatat
     6901 cggcaaagcg gtttggacat ctatgcatgg cacggcatgt atttcttccc ccgctttccg
     6961 ttcatcgaca tcgaccgcat ccgctgggtg cgcgtgggtt tgaaagcctt caaacactac
     7021 atccgcgaaa acgggctgcc cgacctgatt cacgcccacc gcatgaacta tgccggcata
     7081 ctcgcccaaa aaatttccca aaaatacggc atcccctatg tcgtcacgaa acacagcagc
     7141 accattacgc gcggtctgat ccgtccccac caatggcagc ctatgaaaaa tgcggcggcg
     7201 cacgccgccg cacgtctcgc catcagccgc catttcgcac acgtcctgca acacaaatac
     7261 ggctgcgaat ggcagtacct ccccaacata ctgggcggaa tattcaaccg accgtttgaa
     7321 caaagagaaa aaaacaacaa accgcatttc gtgttctgca ccgtctcgca ccttcgccgt
     7381 ctcaaaggac acgatgtcct gctcactgcc tttgcccggg cgttggcaca atgcccgcaa
     7441 ctgcgtctaa acatcggcgg cagcggacag gaagaacagc ggctgaaaca gcaggcggca
     7501 gacttgggca ttacccatgc cgttacattt ttgggcgcac tgcaacccga agcagtcttg
     7561 gatttgatga agaacagcga cgcatttgtc cttgccagcc gcaccgaaac cttcggcgtg
     7621 gtctatatcg aagcactgtc ccaaggattg cccgtcattg caacacgctg cggcggtgcg
     7681 gaatctattg tttcagacgg caacggatat ttggttcctg ttgacgacga cgatgccctt
     7741 gccgacgcac tcatcaaaat gtatgaacac cactctgatt tcgaacctgc ccgacttagg
     7801 gaaaactgtc tgaacgaatt tggcgaaaat gccgttatag gcaggttgat cggcattttc
     7861 cgacaggcaa tcgcagaata cggtaagaaa ataccggtga a
//
LOCUS       DBBZYD010000095         7753 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.095, whole genome shotgun sequence.
ACCESSION   DBBZYD010000095 DBBZYD010000000
VERSION     DBBZYD010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7753
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.095"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(354..1766)
                     /gene="trkA"
                     /locus_tag="ACJJDL_001746"
     CDS             complement(354..1766)
                     /gene="trkA"
                     /locus_tag="ACJJDL_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HGG7574418.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(1864..3387)
                     /locus_tag="ACJJDL_001747"
     CDS             complement(1864..3387)
                     /locus_tag="ACJJDL_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HGG7574419.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRIDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLDKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTGLLGMIGKSERGAATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVES"
     gene            complement(3694..4500)
                     /locus_tag="ACJJDL_001748"
     CDS             complement(3694..4500)
                     /locus_tag="ACJJDL_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG7574420.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALKKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            complement(4552..4803)
                     /locus_tag="ACJJDL_001749"
     CDS             complement(4552..4803)
                     /locus_tag="ACJJDL_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574421.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            4903..5664
                     /locus_tag="ACJJDL_001750"
     CDS             4903..5664
                     /locus_tag="ACJJDL_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574422.1"
                     /translation="MDVNKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRDHVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMALFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            5963..7132
                     /gene="metZ"
                     /locus_tag="ACJJDL_001751"
     CDS             5963..7132
                     /gene="metZ"
                     /locus_tag="ACJJDL_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HGG7574423.1"
                     /translation="MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            7227..7433
                     /locus_tag="ACJJDL_001752"
     CDS             7227..7433
                     /locus_tag="ACJJDL_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HGG7574424.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(7532..7644)
                     /locus_tag="ACJJDL_001753"
                     /pseudo
     CDS             complement(7532..7644)
                     /locus_tag="ACJJDL_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         1680 a         1913 c         2221 g         1939 t
ORIGIN      
        1 acttttaaat tttcagacgg cttttgaata ttgccgttgc ccgacgttct ggattcccgc
       61 cacctttcgt cattcccgtg gaaacgggaa tctagaacct ctaaagcttc agctaacctt
      121 tgaatattgc cgctttccaa tggtctagat tcccgcaact cttcgtcatt cccgtgaaaa
      181 cgggaatcta gaacctctaa attttcagat aacctttgaa tattgccgct atcccaaggt
      241 ctagattccc gcctgcgcgg gaatgacggg gagggcggat gccgtctgaa gcccacctac
      301 cattatttct gcttccatac cgcttggcgg caatgtgtcc ggaatggggc ggtttatccg
      361 aaaaagccca ttttgacttg gatgagtttt tccagttcgt tcaggatgcg ccggcgcgag
      421 acgaaaaaga tgatgtggtc gccgtcttgg atgacggttt cggtatggtg tcccataatg
      481 gtttcgccgg ttccggcgcg gacgacggcg gcaatgtggc agccttcggg ccatttgatg
      541 ccgctgatgc gcctgccgat gatggcggaa gtttttttgt cgccgtgtgc gacgacttcg
      601 atggcttccg ccgtgccgcg ccggatgggg tggacggcaa cgatgtcgcc gcgccggatg
      661 tgggcgagta tcgagccgat ggtgatgagg tggggggaga cgacgatgtc gattttgttg
      721 ccttcgagca aatcgacgta gcttgagcgg ttgacgatgc cgatgacgcg cttcgcgccg
      781 aggtttttcg ccaaaagggc ggacataatg ttgctttcgt cgtcgttggt cagggcgcag
      841 aatacgtcga tttcgtcgat gtattcgttg tcgagcaggg tttcgtcggt tgccgaacct
      901 tgcaggacga gggtgttgtc gaggttttcg gctatccatt cggcacggcg cggccgacat
      961 tcgatgattt tgacgttgta tgcgtgttcg agctgcttgg cgagacggta gccgatgttg
     1021 ccgccgccgg caatcatgat gcggcgggtg ctggtttctt tggggcgcaa ttcgggtatg
     1081 accgcgccga tgttttcggc ggcggcggca aacaggattt cgtcgccttc gatgatgacg
     1141 gtttgcggcg cggggacgat gaggcggttg ttgcggtaaa cggcacagat ttggcagtcg
     1201 gccccgtcgg gcaaatcttg ggcgatgtcg gcaatgctgc gtccgacaag cagtccgccg
     1261 cgccgcgcct gtatgatgac catccgcacg cggtcgtctg caaaacgtaa aacctgcaat
     1321 gcgcccgggc agtctatcag gccggcaagc tgttcggtaa cgagctgttc ggggctgatg
     1381 gtttcggtta tgccgaatat ggaaaggctg ccgttttcgt tgttttcgag cttggggctg
     1441 aggtattcga ggtattcgct ggaacggacg cgcgcgatgc ggccggggat gttgaacagg
     1501 tcggcggcaa ctttgcaggc gacgatgttg gtttcgtcgc tgcgggagag cgcgagcagc
     1561 aagtcggcat cttccgcgcc ggcgcgttct aatgtgaagg gggatgcgcc gttgccgaaa
     1621 acggtttgga catcgaggcg gctgcctgtt tcctgcaatg ctttttcgtc gatgtcgata
     1681 acggttacgt cgttgttggg tatggcggca aggttttgtg cgacggtaga acctacctgt
     1741 ccgttgccta aaatgaggat tttcacggtg tgggtcgccg agtgatgaaa tggtggattg
     1801 taccgcaacc gggggcggaa atgccgtctg aaagcagatt ttgtgttcag acggcatggc
     1861 gcctcaagat tcgacgggga tgatgccgat tttcgcctgc cattggggcg gggcggtggc
     1921 gtggatggat tcgcctttgc tgtccacggc gacggttacg ggcatgtctt tgacttcaaa
     1981 ttcgtaaatg gcttccatgc ccaattcggg gaacgccaag actttggaag atttgatggc
     2041 ttttgccacg agatacgccg cgccgccgac cgccatgagg tacacggctt tgttgtcggc
     2101 aatggcttcg caggtggccg cgccgcgctc ggatttgccg atcataccca agaggccggt
     2161 ttgttcgagc atttggcggg tgaatttgtc catacgggtg gcggtggtgg ggcctgccgg
     2221 gccgacgact tcatcgccga ccggatcgac agggccgacg tagtaaatca ggcggttggt
     2281 gaaatcgacg ggcaattctt cgcctttgtc gagcatatcg acgaggcgtt tgtgtgcggc
     2341 atcgcggccg gtgaggattt tgccgttcaa cagcaatacg tcgccggttt tccagctcgc
     2401 cacttcttct ttggtcagct tatcaacatc aatgcgtttg ccgttgtcgg ggctgtaagt
     2461 caaatcgggc cagtcttcga cgcgcggtgg agtcagctcg acagggcctg agccgtccaa
     2521 ttcaaactct acgtggcggg tggcggcgca gttgggaatc atcgcaatcg gcttagaagc
     2581 ggcatgggtc gggtaatcga ggattttcac gtccaacacg gtggtcagac cgcccaagcc
     2641 ttgcgcgccg atgcccagcg cgttgacttt ttcaaagagt tcgaggcgca gggcttcggt
     2701 ggtggacaat tctgcacctg acgctgcttt ttcctgcaac tcttgaatgt cgatgtggct
     2761 catcaaggat tcttttgcca tcaacacggc tttttcgggc gtgccgccga tgccgatgcc
     2821 caagatgccg ggaggacacc agcccgcgcc catcgtcggg atggttttca atacccaatc
     2881 gacgatgttg tcggaaggat tgagcatggc gagtttggat ttgttttcag aaccgccgcc
     2941 ttttgccgcg caggttactt cgactttgtc gcccggcacg atgctcatat ggatgacggc
     3001 gggcgtgttg tctttggtgt tttgacgttt gccggccggg tcggcgagaa cggaagcgcg
     3061 cagcgtattg ccttcccaag tgtaggcgcg gcgtacgcct tcgttaacca tttcttccac
     3121 gctcatgtcc gcatcccact gcacatccat accgactttc aaaaacacgg ttgcgatacc
     3181 tgtgtcttgg cagatggggc ggttgttttc ggcacacatg cggctgttga ccaaaatctg
     3241 cgtcatcgcg tctttggcgg cggggttttc ttctttctgc cacgctttat agagcgcgtc
     3301 gatgtagtct ttgggatggt agtagctgat gaattggaag gcatcgcaaa tgctttggat
     3361 aaagtcttcc tgtttgatga cggtcatgat tgtgttcctt ttcaaggttg tggcggtaag
     3421 tgtctgctgt tgttttaagc aacctttttg aaggctgttt tttatcaggt tgaaatagtg
     3481 ccagcgtttg tacggtaaag acaatacata attctaatct cttgattatc aatttgtttt
     3541 aataaaatac tgttttactc ggattttgat atttgtaatc tttgcctgtt gctttgcggt
     3601 agggagaaat cagcaggcag ttcattgtag gccgattgat gaacaatgcc gtctgaaagg
     3661 gcttcagacg gcattgtgtt cggatgggcg ggcttatttt gcggcctgtc cgtcttcttt
     3721 tgcaaaatat ttggcgtaga ttttgtcgta ttcgccgctt tcgcgtactt ttttcaacgc
     3781 atcgttcagc attttgacgg ttgcttcgtc gcctttgcgt accgcgatgc cgtagtgttc
     3841 ggtggtgaag tcgggcaggg taacgaagtc cattcctttg gtcggattgt ttttcacata
     3901 attggcgatg accgcgctgt cgctgactac ggaatctaag ccgccgtttt ccagttcttt
     3961 gataatcagg ggaacgtttt caaagcgcgc gattttcggg ttgtcgttgc ccaagagttt
     4021 ggatacggag aaatcgcccg tgtagccggt taccacgccg actttgttca tgtttttcaa
     4081 atcttcggaa gaagatattt ttttgccttt cggaacgagg acgacttggg tgatttcaaa
     4141 atacgggtcg ctgaagtcca tagactgttt gcggtcgtcg gtaatggtta cgcccgacat
     4201 cacaacgtcc gcatcgccgt tgttcaaggc ggggaaaagg ctgtcccacg gctggtgttt
     4261 gaattcgatt ttaaaattgc ccgccttcgc catcgcgttc atcaaatcca catcgaaacc
     4321 ttcgacattg cctttcgagt ctaaagattc aaagggggca aactcggcgt tggaagccac
     4381 gcggtacact ttgtcggggt ttgcggcggg cgcggcggca tctttaccct gaccgccgca
     4441 ggcagacagc gcgagcgcgg aacaggcaag ggcggcggca atccattttt tcatattcat
     4501 caaaattcct ttcggtaatc aaaaagccta aaaaatcagt ttaacataaa attaacgttc
     4561 tttttcacgg aaaaacgcat aagtaacgtc gtggaacaaa tcggtatggg ggctgtcctc
     4621 atagctcaat tctgccaagg cgtcctcaaa agcaagctga atcgactcga ccgcgatttc
     4681 ggcggtttcg gcgggaaggg cgcggattaa ggctttgaat gcggtggaca ggacgtggtt
     4741 ctgcatacgc agcacgtcgt tcgcctcttc cagatattcc aaacgctgtt cgatgctgcc
     4801 catgatgtat cctcgcgaat ctgttaaaat gcgccattat atcaaaccgc gctttgggcg
     4861 cgggtttgtc tgcctgcaaa gattaagaac cggaagccga aaatggatgt gaataaagag
     4921 ccgaattggg aaaaacgttt ggaaaacctg cgtcagacgc gccgtatgaa ggcagtgccg
     4981 acttacgcgc cgctgtcccg cccctctgaa accggaacgg acgcgcctgt gccgaaactg
     5041 gacgatgaga gccgagacca tgtgttgaag gcgtatctga aaaaatggca ggaggaacac
     5101 aatgccgccg ttgccgattg cggcgaggaa gtcgaaaccg acccgatgat tgtccttcag
     5161 gaaaactggc tcaacgcgca ggcttccctg caaatgtcgg tttcggaaaa acacatcgaa
     5221 tcgcggcgga gaatcctgtt cgatgccaaa aaagacagtg ccgaatttga aaccggacag
     5281 attgaaggcg gggaaaacgc cgatgcggca gaatcgggta cggcggcaga cggggttgcg
     5341 gaaaacggcg aaggcggtgc ggaagaggcg ttgatgcccg tccaaatcaa tatcctgaac
     5401 ccgaaagccg tcaaccggcg cgaagtgttc tgcctgtccg aacaggagct gaccgaacgg
     5461 ctgatcaaac gcctgcgtcc gcatctgacc gataccgtca acggcatcat tcgaacggcg
     5521 gtgcaaaagc agatggcact ctttacttat cagctccagc aaatgctgca cgagcaggcg
     5581 ggcgcggtgg tcgaagacgt gttggaacac gatgtccgca aaatcctcaa cgacatcaag
     5641 tacgagttaa aatacaaacg ctgaccgtca tgccgtctga aagccgtgtt cagacggcat
     5701 ttgcattctc atccgacttg aaagcctcac ggaacgggcg caaaatatta atatagtgga
     5761 ttaacaaaaa tcaggacaag gcgacgaagc cgaagacagt acaaatagta cggaaccgat
     5821 tcacttggtg cttcagcacc ttagagaatc gttctctttg agctaaggcg aggcaacgct
     5881 gtactggttt ttgttaatcc actataaatt aaacaacggg cgcacgctcc gttgccgaac
     5941 ggataaaacc gaggaatcac cgatgagcaa aaaactccat ccgcaaacgc tcgccatacg
     6001 cggcggcaaa gaacaaaccg gataccgcga acacaatcag gcattgttcc tgaccagcag
     6061 tttcatgtgg gacaacgccc aacacgctgc cgatttgttt tcaaaaaaaa tcaaaggctt
     6121 cacttatacc cgtaccgcca acccgaccac agccgccttt gaaaaacgca tcgccgcttt
     6181 ggaaggtgcg gaacgcgcgg tcgccacttc gaccggcatg tccgcgattc aggcggcgtt
     6241 tttcaccttt ttgcaggcgg gcgaccatgt gatttccagc cgcagcctgt tcggcacgac
     6301 cgtcggcttt atcaataaca tcgttaccaa attcggcatc gaagtgagtc acgtgtcgcc
     6361 gactgatata aacgaatgga aagccgccgt caaagccaac accaaactgc tgtttttgga
     6421 aacgccgtcc aatcccttgg gagaagtggc cgacttggaa gccttggcgg aattggcgca
     6481 cggcatcggc gcgctcttgg tggtggacaa cagcctgctg tcgcctgtcg gctctcagcc
     6541 tttgaaacac ggcgcggata tttccgtttc ctccgcgacc aaagccatag acggacacgg
     6601 gcgcgtgatg ggcggcgtgt tggcgggttc ggaagaactg atggcgcagg tcgccgttta
     6661 ctgcaactct tgcgggctgg caatgtcgcc gtttaacgca tggcagttgt tgagcggcgt
     6721 ggaaaccctg tctctgcgta tggaaaaaca gttcgacaac gccttgaaaa tcgcgcaatg
     6781 gctgcaagcg cagccgcagg ttcaagccgt gtattacacc ggattacccg accatcctca
     6841 ggcggagctt atccgcaaac agcaaaacgg cggcggcatc gtcatcggct ttgaagtcgc
     6901 cgaccaagca gccgcgtgga aagtcgtgga cggcgtcgaa cttttctccc gtaccgccaa
     6961 cctcggcgac gtgcgctcga ccattaccca tccgtggaca accacgcacg gcaggatgca
     7021 gcccgaagaa aaactcgccg ccaacatccg ccccggattg gtgcgcctgt cggtcggttt
     7081 ggaatatgtt ggcgatttga ttgacgattt gaaacaggca ctcgcgcgct gattgcgtgt
     7141 tcagacggca tcggcggaaa aacaccgcaa atgccgtctg aaacccttat cttatatgac
     7201 atacacgtca acaataggaa aaaaatatgg atgaagcggt ttttgccgat tgggcgttga
     7261 aaatctgcct gaccggcttg attatttttt tgggttttat cgtttggaat ttgggcaagg
     7321 agtctaaagc gggcaaattc ggcatcgcca ttttgttttt ggttttgggc ttgggcgtgt
     7381 ttggttttgt gttcaaagag ttattgatta agtttttggt attgccgaaa taggtttgcg
     7441 gtctgtcaaa atgccgtctg aaatcataaa aagtaatctg caccctaaaa gtttgattta
     7501 accgccaact gattaaggtg cggattttta tgacaaaata tagtggatta acaaaaacca
     7561 gtacggcgtt gcctcgcctt gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc
     7621 ttgatttaaa tttaatccac tataaaaatc atctttccgc agtcattccc acggatgcga
     7681 aagcctgtct ttttgaatcc cggataattt tacatcgtca ttcccgcgca ggtgggaatc
     7741 cagatcattg ggt
//
LOCUS       DBBZYD010000096         7624 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.096, whole genome shotgun sequence.
ACCESSION   DBBZYD010000096 DBBZYD010000000
VERSION     DBBZYD010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.096"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(274..2310)
                     /locus_tag="ACJJDL_001754"
     CDS             complement(274..2310)
                     /locus_tag="ACJJDL_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HGG7574425.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVERLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDDGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFADGTLQLPTAYLVCNFAPPVG
                     DKEARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YDVLAQMSAHEETGVPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRGAAESFKAFRGREPRIDALLRHSGFDNAA"
     gene            complement(2398..3270)
                     /locus_tag="ACJJDL_001755"
     CDS             complement(2398..3270)
                     /locus_tag="ACJJDL_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HGG7574426.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            3540..5930
                     /gene="gyrB"
                     /locus_tag="ACJJDL_001756"
     CDS             3540..5930
                     /gene="gyrB"
                     /locus_tag="ACJJDL_001756"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HGG7574427.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASAETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIISDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            6027..7412
                     /locus_tag="ACJJDL_001757"
     CDS             6027..7412
                     /locus_tag="ACJJDL_001757"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HGG7574428.1"
                     /translation="MISIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNILGNQVLPKHPNSLRFTAYASDGTVLNEQVYYSVGGGFVVTEEDFDRQAETEK
                     AVPYPYTSCAELLARCRLNRLDISEVVLANEAALAGCGEAEIRRRVAGVADVMEGCIK
                     RGLAADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTALTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKSTYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
BASE COUNT         1722 a         2120 c         2167 g         1615 t
ORIGIN      
        1 ccgtctgaag cgttgtttga ccgtttcaga cggcattttt atcaaattca aaaatattcc
       61 gtcattcccg cgaaagcggg aatctagaac gtaaaatcta aagaaaccgt tttatccgat
      121 aagtttccgc accgacagac ctggattccc gcctgcgcgg gaatgacggg attttggctt
      181 actgtttttg tgaaaatggc gaaaccgtgc aaatgctgat gccgtctgaa acactgtttg
      241 attgtttcag acggcatttt ttgttcacat cgatcaagcc gcgttgtcga aaccgctgtg
      301 gcgcaagagt gcgtctatgc gcggttcgcg tccgcggaag gctttgaagg attctgccgc
      361 gccgcgcgat ccgccgacgg cgaggatttc ctgccaaaag cgtttgcctg tggcggcgac
      421 atcgtcgctt tcttcaaagg cggcgtatgc gtccgcactc aatacttccg cccacgcgta
      481 gctgtaatag cctgcggaat agccgcctgc gaagatgtgg ccgaagctca aggcgaagcg
      541 gttgtattcg ggcggttgga tgacggcgac ttttttgcgc acgctgtcta aaacctgttg
      601 ccagtttttc agacggcctt cgtcgtcttc gctgtaaatc atcatatcga agagggcaaa
      661 ctccatttgg cggacgagga acataccgcg ttggaagttt ttggcggcga gcattttgtc
      721 gaagagttct ttcggcaggg gaacgccggt ttcttcgtgg gctgacattt gtgccaagac
      781 gtcgtattcc cagacgaaat tttccataaa ctggctgggc agttcgaccg cgtcccattc
      841 tacgccgttg atgccggata cgcccagttc gtccacttgg gtaagcaggt ggtgcagccc
      901 gtgtccggtt tcgtggaaga ggatgaggat ttcgtcgtgg ctcaagcggg cttctttgtc
      961 gccgacgggc ggggcgaagt tgcagacgag gtaggcggtg ggcagttgca gcgtgccgtc
     1021 ggcgaagcgg cggcggcctt tgtagtcgtt catccacgcg ccgccgcgtt tgccttcgcg
     1081 tgcgtacaaa tccatataaa cgccgcctat ggtttcgccg ttttgttgca attcaaaata
     1141 gcgcacgtct ttgtgccaga cggggacggt tttttcggta aatccgatgc cgtagagttt
     1201 tttgatttgg gcgaacagtc cgtttaatac tttgccgacg gggaagtatt ttttgacttc
     1261 ggtttcgctg aacgcgtatt tggcttcgcg cagtttttcg ctggcgtagc ccaagtccca
     1321 cggttgcaaa tcggcgaggt tcaggctttc gcgggcgaag gctttgactt cggcgaggtc
     1381 tttttcggcg tagggtttgg cgcggcgggc gaggtcgtgc aggaagttta aaacttgttc
     1441 gggcgtgtcc gccattttgg ttgccagcga caattcggcg tagtttttga agccgagcag
     1501 tttggcggtt tgcagggcgt ttgcgagcgt gcggtcgatg ttggcggtgt tgtcgaattt
     1561 gccgtcgtct gaaagttcgc tggcgcgggt aacgtaggcg cggtagattt gttcgcgcag
     1621 ttcgcggttg tcggcgtatt ggatgacggc gaggtagtgc ggaatctgca aaccgatttt
     1681 gtagcctgtt ttgccttcgc tttgcgcggc ggcggcaaac atggcgagcg cgtcttcggg
     1741 aatgccggca agcggtgcgg catcgtcaaa gtaaatgccg aacgcgtcgg tcgcgtctag
     1801 gacgttttgg gagaatttgg cggaaagttg cgcgccttcg gtttgcagtt ttgccagttc
     1861 tgcctgctgt tcgggcggca gttccgcgcc gctgaggacg aaatcgcgca gatcgtggtt
     1921 gagtttggtt ttttgcgcgg gggagagggt gtcgaactcg ggggagtttt tgatggtttt
     1981 gaagcggttg tacagctcga tgtcttgtcc gatttcggtg aagaagacgg tgatttcggg
     2041 catcagttcg ttatagacgg cgcgcagttc gggcgtgtcg gcgacggagt tgaggtgcga
     2101 caccacgccc caaatcctgc cgacgcgctc ggtgatgccg gtcagacgct cgacggtgtt
     2161 cgcccagccg gtgtgcgttt gggctttgat ggcggcgatt tgttcgcgcg cttcggcaat
     2221 ggcggtttgc agggcgggtt tgatgtcttc ggttttgatt tgatcaaaac ggggttcttc
     2281 gcccaaatgg agcagtgcgt tgtcagtcat aagatgggtt tcctttgcgt gttgtgcttc
     2341 agacagcata tcggcaatat gccgtctgaa gccggaaatg gggtcggtcg gggaaagtta
     2401 aagtgtttcg gagccggcgg ggtaatttaa caggcggtat tgtacgcgca aaaattcgtc
     2461 cataaccgcc tgttggattt ccagccgctt tgaaacgggg gaggcgaagc ggacgatgat
     2521 gcggtatgcc ttgtcatcgt acggcacgcg ggtaacgcgc ggtctggcgg cgggcgtgat
     2581 aaacagtttt tccgcctgca cgttttccaa atgccgttgg atggcgggga tgtagggcgc
     2641 gcacaagggc tcgagtacgg ctttcagacg gcatacggct tcatccgaat ccaaatggat
     2701 ggggacgggg atttcgaccg tatggatgac gtagtcgccc aaaatattgt cgcggcgcac
     2761 gggatggctc aacaacaggc tgttggggaa agaaacggtg gttcccgcaa gctgtccgac
     2821 cagggggttc ggaccgacct gcatcatcag cgtgttcaac aggttgatgt cgaccacgcg
     2881 cccgcgcagg ccgttgattt cgatatagtc gccgaccgag tattgctggg tggcagacct
     2941 taaaatactg cccgacagac acataatcag ttcctttgtc gccacgacga ccgccgccgc
     3001 caccgcaaac atcgacaaag ccagcgtttg gatttgcgcc gaccagataa atgccagcga
     3061 aaacagcacc aaaagcagcg ttatattgcg gctggcaacc aaaaaccgcc gcttgctttc
     3121 gatgccgaaa tccggatgcc gtttgaagtg gatattcaac agaagggcgc gcgccagcag
     3181 caaagccgcg accaccgcca cggattcgac cgcctccgca cgtatcggga cggcaccgag
     3241 ccaagtgtcc aacatattcc atatttccat ttccgcgccc ctgtccgaaa agtatagggt
     3301 gtagatttta gtggcaaaaa aacgcttttg ccactttacg ggacaatccc cgacctgatg
     3361 ccggaggcaa acgtaccgtt tcatcttttc ccggcggcac actgatgcgg ataacgctga
     3421 attaggcggc aaaatcggct ataatacaca attatatatg ccgtcccgcc cgctttttct
     3481 acaaggtgcg gacttgtttt ggcggcatcg caaaatcttt tcaaaatccg gcaaaaaata
     3541 tgactgaaca aaaacacgaa gaatacggcg ccgacagcat tcaggtgctc gaaggcttgg
     3601 aagcggtacg caaacgcccc ggtatgtaca tcggcgacac gcaggacggc agcggcctgc
     3661 accacatggt gttcgaagta ttggacaacg ccattgacga agcactcgcc ggacattgcg
     3721 acaaaatcac cgttaccatc cacgccgacc attccgtcag cgtcgccgac aacgggcgcg
     3781 gtatgcccac cggcatccac ccgaaagaag gacgctccgc cgccgaagtc atcatgaccg
     3841 tattgcacgc gggcggtaaa ttcgacaaca acagctacaa aatctccggc ggcctgcacg
     3901 gcgtgggcgt gtccgtcgtc aacgcgctgt ccgactgggt aacgctgacc atctaccgcg
     3961 acggcaaaga acacttcgtc cgcttcgtgc gcggcgaaac cgaagagccg ttgaaggttg
     4021 tcggcgattc cgataaaaaa ggcacgaccg tgcgcttcct cgccagtgcg gaaaccttcg
     4081 gcaacgtcga atacagcttc gacatcctcg ccaaacgcat ccgcgaactt tcgttcctga
     4141 acaacggcgt ggacatcgaa ttgaccgacg agcgcgacgg caaacacgaa agcttcgccc
     4201 tttccggcgg cgtggctgga ttcgtgcaat acatgaaccg caaaaaaacg cccttgcacg
     4261 aaaaaatctt ctacgcgttc ggcgagaaag acggcatgag cgtcgaatgc gcaatgcaat
     4321 ggaacgacag ctatcaggaa agcgtgcagt gcttcaccaa caacatccct cagcgcgacg
     4381 gcggtacgca cctgaccgcg ttgcgccaag tgatgacgcg caccatcaac agctacatcg
     4441 aagccaacga agtcgccaaa aaagccaaag tggaaaccgc cggcgacgat atgcgcgaag
     4501 gtttgacctg cgtgttgtcc gtcaaactgc ccgaccccaa attttcgtcc caaaccaaag
     4561 acaaactggt ttccggcgaa atcggtcccg tcgtcaacga agtcatcagc caagccctga
     4621 ccgacttcct cgaagaaaac cctgccgaag ccaaaatcat caccggcaaa atcgtcgatg
     4681 ccgcccgcgc gcgcgaagcc gcccgcaaag cccgcgaaat cacccgccgc aaaggcgtaa
     4741 tggacggctt ggggctaccc ggtaaactcg ccgactgcca agaaaaagac cccgcattgt
     4801 cagaacttta tctggtcgag ggcgattctg caggcggttc cgccatgcag gggcgcgacc
     4861 gcaaattcca agcgattttg ccgcttaagg gcaagatttt gaacgtcgaa aaagcgcgct
     4921 ttgaaaaaat gctcgccagt caggaagtag ccgctttgat taccgcgttg ggcgcgggca
     4981 tcggcaaaga agaattcaat gccgagaagc tgcgttacca ccgcatcatt atcatgaccg
     5041 atgccgatgt ggacggcgcg catatccgca ccttgctttt gaccttcttc taccgccaaa
     5101 tgcccgaact ggtcgagcgc ggctacatct atatcgccca gccgcctttg tataaagcga
     5161 aatacggcaa acaggaacgt tacctcaagg acgagttgga aaaagaccaa tggctgctcg
     5221 gtcttgcctt ggaaaaagcc aaaatcattt cagacggccg caccatcgaa ggcgcagaac
     5281 ttgccgacac cgccaaacaa ttcctgttgg caaaaaccgt catcgaacag gaaagccgct
     5341 tcgtagacga actcgtcctg cgcgccatgc tacacgcgtc gcccattgat ttgacgtcgt
     5401 ctgaaaacgc cgataaagcc gttgccgaac tttccggtct gcttgacgaa aaagaagtcg
     5461 ccctcgaacg catcgaaggt catgaaggac accggttcat caaaatcacg cgcaagctgc
     5521 acggcaacgt catggtcagc tacatcgaac ccaagttcct caacagcaaa gcctaccaaa
     5581 ccctcaccca aaccgccgcc gcgctcaaag gcatggtcgg cgagggtgcc aagctttaca
     5641 aaggcgaaaa cgggtacgac gcggacagct ttgaaaccgc tttggacatc ttgatgagcg
     5701 ttgcccaaaa aggtatgtcc atccaacgat acaaaggctt gggcgagatg aaccccgagc
     5761 agctgtggga aaccacgatg gatcccgccg tgcgccgcct gttgaaagtg cgcatcgaag
     5821 atgccattgc cgccgacgaa gtgttcgtta cgctgatggg cgacgaggtc gagccgcgcc
     5881 gtgcctttat cgaaaacaac gcgctgattg cccaaaatat cgacgcataa gtgccgtttt
     5941 aaaaaaggag acgggcatcg tgccgcgtct cctttttggt tggtcaaacg gaacctgtgc
     6001 cgtctgaaaa accgtcggag caaaatatga tcagcatttt cgatattttc aaaatcggta
     6061 tcgggccttc cagttcgcat acggtcggcc cgatgaaggc agccgccgcc tttgcggcag
     6121 gtttggatgc acaggctgtt cgcatcgtca tcgacattta cggctcgctc gcactgaccg
     6181 gatacggaca cggtacattt gacgcgctga tgctcggttt ggaaggcagc ctgccgcacg
     6241 acatcccgct tgccggcatt cccgaacgcc tcgaacgcat ccgcacgcag cacatcctcc
     6301 ggctcaacgg gcaagaaatc cgcttcatcc ccgaccgcga cctgaacata ctcggcaatc
     6361 aagtgctgcc caaacacccc aacagcctgc gttttaccgc ctatgcttca gacggcacgg
     6421 tattgaatga acaggtttat tattcggtcg gcggcggctt tgtcgttacc gaagaagatt
     6481 ttgaccggca ggcggaaacg gaaaaagccg ttccctatcc ctataccagt tgcgccgaac
     6541 tgcttgcccg atgccgtctg aaccggctcg acatctccga agtcgtgttg gcaaacgaag
     6601 ccgcgcttgc cggatgcggc gaagccgaaa tccgccgccg cgttgccggc gttgccgatg
     6661 tgatggaagg ctgcatcaaa cgcggtttgg cggcagacgg cgagctgccc ggcggattga
     6721 acgtccgccg ccgcgccccg cagcttgccg ccaagctcaa agtcctgcgc gaaaccgaaa
     6781 tcgtcaacac ccagctctgg ccgatggtgt acgccatggc ggtcaacgaa gaaaacgccg
     6841 ccggcggacg cgtcgttacc gcactgacca acggcgcggc aggcatcatt cccgccgtat
     6901 tgcactattt ccgcaagttc aatccgcacg ccacacagga acgcgtcgaa aacttcctgc
     6961 tcaccgcagg cgcaatcggc atcctctaca agaccaacgc ctccatttcc ggtgcggatg
     7021 tcggctgtca gggcgaagtc ggcgtagcgt gttcgatggc ggcgggcgca tacgccgaag
     7081 tcatcggcgg cacgcccaaa caagtggaaa acgccgccga aatggcgatg gaacaccatt
     7141 tggggctgac ttgcgacccc gtcggcggac tggtgcaaat cccctgcatc gagcgcaacg
     7201 gcatcgccgc cgaaaaagcc ctcaaactcg gcacgctcgc gcttttggaa gacggcacgg
     7261 acaaaaaagt ctcgctcgac gaagtcatcc gaaccatgtt acagacaggg cgcgacatga
     7321 agtccaccta caaagaaacc tcgcttgccg gactcgccgc cacgctccgg aaaaaagccg
     7381 tccccgtatc cgtgcgcgtg gtcgagtgct gaggatggac agaaacgaaa atgccgtctg
     7441 aaaacagttt tttagacggc atttcattta tttcttgcgg ctttaccgtt tcagtgccag
     7501 cgtcaacacg cccgccgtaa ccagccccaa gcctatccat tcctgcgtgt tcgggcgttc
     7561 gtctaagaaa accaccgcca tcaggaatgc aaaccggcgt tgtttgcagc atccggcaag
     7621 aatt
//
LOCUS       DBBZYD010000097         7604 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.097, whole genome shotgun sequence.
ACCESSION   DBBZYD010000097 DBBZYD010000000
VERSION     DBBZYD010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7604
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.097"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(454..813)
                     /gene="rnpB"
                     /locus_tag="ACJJDL_001758"
     ncRNA           complement(454..813)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACJJDL_001758"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(892..1995)
                     /gene="prfB"
                     /locus_tag="ACJJDL_001759"
     CDS             complement(892..1995)
                     /gene="prfB"
                     /locus_tag="ACJJDL_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HGG7574429.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(2098..2991)
                     /locus_tag="ACJJDL_001760"
     CDS             complement(2098..2991)
                     /locus_tag="ACJJDL_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HGG7574430.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            3333..3782
                     /locus_tag="ACJJDL_001761"
     CDS             3333..3782
                     /locus_tag="ACJJDL_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HGG7574431.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3856..4164
                     /locus_tag="ACJJDL_001762"
     CDS             3856..4164
                     /locus_tag="ACJJDL_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574432.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            4280..5122
                     /locus_tag="ACJJDL_001763"
     CDS             4280..5122
                     /locus_tag="ACJJDL_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HGG7574433.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            5112..5858
                     /locus_tag="ACJJDL_001764"
     CDS             5112..5858
                     /locus_tag="ACJJDL_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HGG7574434.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLST"
     gene            5880..6467
                     /locus_tag="ACJJDL_001765"
     CDS             5880..6467
                     /locus_tag="ACJJDL_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HGG7574435.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6473..6652
                     /locus_tag="ACJJDL_001766"
     CDS             6473..6652
                     /locus_tag="ACJJDL_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HGG7574436.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPHCREYKRQL
                     QTIKISLAKTTRTSK"
     gene            6884..7324
                     /locus_tag="ACJJDL_001767"
     CDS             6884..7324
                     /locus_tag="ACJJDL_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HGG7574437.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1955 a         2013 c         1725 g         1911 t
ORIGIN      
        1 ctgcagatgc ccgacggtct ttatagcgga ttaacaaaaa tcaggacaag gcgacgaagc
       61 cgcagacagt acaaatagta cgaaaccgac tcacttggtg cttcagcacc ttagagaatc
      121 gttctctttg agctaaggcg aggcaacgcc gtaccggttt ttgttaatcc gctataatgc
      181 gcccttcggc gtggcggata tataaggaag tgattttcca tctaagtata gtggattaaa
      241 tttaaatcag gacaaggcga cgaagccgca gacagtacaa acagtacgga accgattcac
      301 ttggtgcttc agcaccttag agaatcgttc tctttgagct aaggcgaggc aacgccgtac
      361 cggtttttgt taatccacta taaaaacaca acctaaataa aaatgccgtc tgaaccatat
      421 ttcaggtttc agacggcatt tgcgtgtcgg atgcacaccg gacgggcggt aagccgggtt
      481 ctgtctcgga cagtcattcc tctaggcata ccgttaccgg tatgctcaag caacctaccc
      541 gaacgctcgg cgggcagcgt cattgcgttc tgtttggtct tgctccgaat ggggtttggc
      601 ctgccgcata ttgttaccaa atgcgcggtg cgcccttacc gcaccttttc acccttgcct
      661 gtgctgccaa agcagccatc ggcggttttg ctttctgttc cactttccgt cgcgttaccg
      721 cgcccggccg ttaaccggca ttctaccctg cggagcccgg actttcctcc ccgtatgcct
      781 tacgcgatac gcggcgactg tctgcccgtc ccgtgtgcgg cgcggattat aacacgaaac
      841 gcaaaaatgc cgtctgaaac ggtacaggtt tcagacggca tacagcctaa actacacgcc
      901 ctgtttcagg ctggcttcga taaagccgtc caaatcgcca tccaatacgg ctttggtgtt
      961 gccgacttcg tagcctgtac gcaagtcttt gatacgtgag gaatccaaaa catacgaacg
     1021 gatttggctg ccccaaccta catcggattt accttcttcc aacgcctgtt tctcttcatt
     1081 gcgtttgcgc atttccaatt catacagttt ggacttcaac atttccatcg cggcggcttt
     1141 gttggcgtgt tgcgaacggt cgttttgaca ttgcaccaca atccccgtcg gctcgtgggt
     1201 aatgcgcacg gcggagtcgg ttttattgat gtgctgaccg cccgcacccg atgcgcgata
     1261 ggtgtcgatg cgcaaatcgg cggggttgat ttcgatttcg atggaatcgt cgatttcggg
     1321 atagacgaac acggaggcaa acgaggtatg gcgtttgttg ttcgagtcaa acggagagta
     1381 acgcaccaag cggtgaacac ctgtttccgt gcgcagcaag ccgtaggcat attcgccttc
     1441 cactcggata gtcgcgcggt tgatgcccgc gatttcgccg tcgtcttctt cgaggatttc
     1501 gattttgaag cctttgcgct cggcgtagcg gctgtacatg cggaacagca tacccgccca
     1561 gtcttccgct tccgtaccgc ctgcgcctgc ggtaatgtcg ataaagcagt tgttcggatc
     1621 ggcgggctgg ttgaacatcc gtttgaactc caaatccgcc atctgttttt ccagccccgc
     1681 cacatcttcc tgcacggcgg caaaaccttc ttcgtcgttt tcttcgacgg tcatttcaat
     1741 cagcatgcgg ttgtcttcga tgcccgaagc gatgttgtcg agcgtcaaca cgatgccttc
     1801 gaggattttg cgctctttgc cgatttcttg ggcgcgtttc gggtcgttcc aaagttcggg
     1861 gtcttcggaa agaccgacaa cttcttccaa tcggtctttc ttaccctgat aatccatata
     1921 aactcggatg tcttcgctgc gcttttccaa atcattcagg gtattgttga gctggttgat
     1981 tacttcggct tccatgattc ttttgttctt tcaaaatttt aggggcgtat tgtacgggat
     2041 tcgggtattt ttttctatgg ataaagcctt ctggaaacac gttcggacgg catagcgtca
     2101 ataacggtat gccgccagtt tgcgtttgat ttcaggcaat gcggcacgtg ctgcctcctc
     2161 acccaaccgg atggcgcgtt ttttctgatc gaatccgccg actgcaccca aatccaaaac
     2221 ctgcggtttg ataaccacat ccgcctgccc caactcattt tgcaacgcgg aaacgctcat
     2281 tacgttcagc gtctgatcga gataagagaa gaagccttgg ctgatgtttt tgcccggacg
     2341 ggcggaaata tcgacggcaa tcacgaaatt cgccccctgc cgccgggcgg cactgacggg
     2401 cacgggctgc gacagaccgc cgtcaacata tgtatgcctg ccgatgataa cgggttggaa
     2461 cacattggga atggcggcgg aagcgcgcac agcctgcccg gcattccctt gattgaaagc
     2521 gacggccttg ccggtttcaa aatcagtagc aacagcggca aatttgatgg gaaactgctg
     2581 aatctgcctg ccgccgactt ttcggttgat gtaattttgc agcttttcgc ctttgataaa
     2641 accactggtg gacaaggtta aatcgactaa atcggttttg cctaaaattt cggcttccaa
     2701 ttcgaggcgg tcgggcgaca tacccgatgc aaaaaggctg ccgactatcg aacctgccga
     2761 tgtgccggta accaccttca caggaatacc gttttctttc aaaaccttaa taatacctac
     2821 atgggcaaat cctttagatg cgccgccacc gagtgccaaa ccgaccactg cggcgggttt
     2881 ggcggtttgc accggcttgc gggcagcatt atttcccgcc gtgccgcagg cggcaagcaa
     2941 cgcggcggcg gcgattgcca aaagcggtct gatttttgaa aacgttacca tattttccat
     3001 tcctttatat atcgcacccc gtcaaaaaga gggattgctt ttcttaacaa ccccctttga
     3061 cagccaagca aatgggggct ttgttaagtc atcatcaaaa ttaatatttc tttttttcct
     3121 ttacggaaat tatatttgaa ggcatactat ccaaggcggg aattatctca caacaccgcc
     3181 gttatccaaa tatcccgcct ttttcctttc ctttccatca aaatactttc tttttatatt
     3241 cattaacttg ttaaatcatt ggctgccggg tgtcagtttt tccgacaaaa tccgtctaat
     3301 ggggtatcaa cagaaccaaa acaggaacac ttatgaaaat cggaacaact tggcagacgg
     3361 catccgctat gctggttttg cgtctgtttg ccgcatatga atttttggaa tcgggtttgc
     3421 aaaaatggaa cggggagaat tggttttccg aaatcaacga tcagtttcca ttcccgttca
     3481 acttgctgcc ggacgcgtta aactggaatc tcgccatgta tgcggagctt ttactgcccg
     3541 tactgttgct tttgggtttg gcaacgcgtc tgtcggcatt agggctgatg gtcgttaccg
     3601 ccgtcgcttg ggctgcggtt cacgccggtt cgggttacaa tgtctgcgac aacggttata
     3661 aaatggcttt aatttatatc gtggtattaa tcccgctgct tttccagggt gcgggcggat
     3721 ggtcgctgga tacgctgctg aaaaaacggt tttgccccca atgccgtctg aagcaagatt
     3781 gattcagtcg tggaatctga ctttaaacat tccaacctta tctcgttaac ttgatattct
     3841 gaaaaggaaa tagaaatgaa caaaaacatt gctgccgcac tcgccggtgc tttatccctg
     3901 tctttggccg ccggtgcagt tgctgccaac aaaccggcaa gcaacgcaac aggcgttcat
     3961 aaatccgccc atggctcttg cggcgcgtcc aaatctgccg aaggttcgtg cggcgcggct
     4021 ggttctaaag caggcgaagg caaatgcggc gagggcaaat gcggtgcgac cgtaaaaaaa
     4081 acccacaaac acaccaaagc atctaaagcc aaggccaaat ctgccgaagg caaatgcggc
     4141 gaaggcaaat gcggttctaa ataatccccc cccttcaaac caagccgcgt ttttcagtaa
     4201 aatgcggctt ttttaacggc aaacaaagat tttttaacaa gcacatcatt cttttgtgcc
     4261 atccgaaccg ggtaaaaata tgattcaaca cgcaggcttg ggctaccgcc gcgacttggc
     4321 ggaagacttt ctctcgcttt ccgaaaacag cccgatatgc tttatcgaag ccgcaccgga
     4381 aaactggctg aaaatgggcg gctgggcgcg caaacagttt gaccgtgtgg cggaacggct
     4441 gccgctggcg ttgcacggat tgtctatgtc gctgggcggg caagcaccgc tggatactga
     4501 tttgatagac ggcatcaaag aaatgatgcg ccgttacgat tgcacgtttt tctccgacca
     4561 tttgagctac tgccacgacg gcggtcatct ttacgatttg ttgccgctgc ccttcaccga
     4621 ggaaatggtg catcatacgg cgcggcgtat ccgtgaagtg caagaccgtt tgggctgccg
     4681 catcgccgtg gaaaacacgt cctactatct gcattccccg cttgccgaga tgaacgaggt
     4741 cgagttcctc aacgccgtcg cacgtgaggc cgattgcggc attcatctgg atgtgaacaa
     4801 tatctacgtc aacgccgtca atcacggcct gttgtcgccg gaggcttttt tgaaaaacgt
     4861 tgacgcagat cgcgtgtgct atatccatat tgccggacat gacgtggaaa cgccggaatt
     4921 gttgattgat acacatggcg cggcagtttt gccgactgtt tgggacttgc tcgaacttgc
     4981 ctatgccaag ctgccgacga ttccgcccac cctgttggaa cgcgatttta atttcccgcc
     5041 ttttgccgaa ctcgaagccg aagtcgccaa aatcgccgat tatcaaacgc gtgccggaaa
     5101 ggaataccgc cgtgcagcct gaaacctccg cccaatacca gcaccgtttc gcccaagcca
     5161 tacgcggggg cgaagccgca gacggtctgc cgcaagaccg actgaacgtc tatatccgcc
     5221 tgatacgcaa caatatccac agctttatcg accgctgcta taccgaaacg cggcaatact
     5281 ttgacagcga agaatggagc cgtctgaaag aaggtttcgt ccgcgacgcg cacgcccaaa
     5341 cgccctattt tcaagaaatc cccggcgagt tcctacaata ttgccaaagc ctgccgcttt
     5401 cagacggcat tttggcactg atggattttg aatataccca attgctggca gaagttgctc
     5461 aaattccgga tattcccgac attcattatt caaatgacag caaatacaca ccctcccctg
     5521 cggcctttat ccggcaatat cgatatgatg ttaccgatga tttgcatgaa gcggaaacag
     5581 ccttgttaat atggcgaaac gccgaagatg atgtgatgta ccaaacattg gacggcttcg
     5641 atatgatgct gctagaaata atgggttcct ccgcgctttc gtttgacacc ctcgcccaaa
     5701 cccttgtcga atttatgcct gaggacgata attggaaaaa tattttgctt gggaaatggt
     5761 caggctggac tgaacaaagg attatcatcc cctccttgtc cgccatatcc gaaaatatgg
     5821 aaggcaattc cccgggccaa aaccatctat ccacataaaa ttaccttgtt cccgatacta
     5881 tgccgctacc cgacctgacc gatgccgaat taatagagtc gcgtaaactg cttctgcatt
     5941 ttgcgcggct tcagttgccc gaccaccctg atttggctga agatttagtg caggaaacat
     6001 tgctgtccgc atacagcgca ggcgacagtt ttcaaggcag ggcacttgtc aacagctggc
     6061 tttttgccat attgaaaaac aaaattattg acgcattacg tcaaatcgga aggcagagga
     6121 aagtctttac cacactggat gacgagctac tggatgaagc atttgaaagc catttttccc
     6181 aaaacgggca ttggacgccg gaagggcagc cgcaacattg gaacactccg gaaaaatcat
     6241 taaacaacaa cgaattccaa aaaattctgc aaagctgcct atacaacttg cctgaaaaca
     6301 ccgcacgggt atttaccctg aaggaaatac tcggtttttc atccgacgaa atacaacaaa
     6361 tgtgcggtat cagcacgtcc aactaccaca ccattatgca ccgcgcccga gaatcattgc
     6421 gccaatgcct gcaaatcaaa tggttcaacc aagaaaaccc gaagtaaacg ttatgaaaaa
     6481 atgccgcgat atcgccctgc ttctttccaa acatcaggac cgggaaacca ccccgggcga
     6541 gaagatttcc atatacacac acctgctgtt ctgcccacat tgccgagaat ataaaagaca
     6601 gcttcaaacc atcaaaatat cactggcaaa aacaaccaga acttcaaaat aaatgccgtc
     6661 tgaaaaggct tcagacggca taagctgacg gaaaaaaatc aaaccgattt actgttatcg
     6721 gcagttcatc cataatacac gcttcaaaag cagcatattc ctccatacgg aatatataaa
     6781 tacgcaaaac acgaaggctg catcaatttg ctttatttgc cttatttcac agacggcgct
     6841 acccctcccg cccaacccgt tctttctgaa tgagcagatt tcaatgatta aggaaaccct
     6901 aatgcgccca atcttcctat ctttcgtttt actccctatt ttgataaccg cctgcagcac
     6961 accggacaag tctgcccgat gggaaaatat cggcacaatc tcaaacggca atattcatac
     7021 atatatcaat aaagacagcg tgagaaaaaa cggaaatctg atgattttcc aagataaaaa
     7081 agttgttacc aatctaaaac aagaacgttt tgccaacacc cccgcataca agactgccat
     7141 tgccgagtgg gaaatccact gcaacaacaa aacataccgc ttaagttcgc tacagttgtt
     7201 tgatacaaaa aacacggaaa tttccacaca aaactacaca gcctcttccc tccgcccgat
     7261 gagcatcctg tccgggacat taaccgaaaa acaatatgaa accgtatgcg gaaaaaaact
     7321 ctgattgcaa cttatacaca aacttaccca caaaccttat cataaaaatg ccgtctgaaa
     7381 tactgaaata tcagcatttc ggacggcatt ttgccatttc tccgaaaagt tatcctcgaa
     7441 gttatccaca ttattttttt aaaccagctt ccatccgaaa tataaacctg ctatacaatt
     7501 tcattatcaa aacgtaaatt gttccattga tacacaaaac tgcttacccc cataattttg
     7561 ataaagcatt tcttacattc ccggctccgt cccgtaatca acac
//
LOCUS       DBBZYD010000098         7546 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.098, whole genome shotgun sequence.
ACCESSION   DBBZYD010000098 DBBZYD010000000
VERSION     DBBZYD010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7546
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.098"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(46..3078)
                     /locus_tag="ACJJDL_001768"
     CDS             complement(46..3078)
                     /locus_tag="ACJJDL_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG7574438.1"
                     /translation="MFWIVMIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPNASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNGAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIYIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPAEFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSSGQYLSETEAFGHDSQAVCPFENVPSERPSCRVSDTEADE
                     GAFQSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGSGSEELPGIGRSGDDETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3243..3923
                     /locus_tag="ACJJDL_001769"
     CDS             3243..3923
                     /locus_tag="ACJJDL_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000041 - transition metal ion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HGG7574439.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSVGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3952..4311
                     /locus_tag="ACJJDL_001770"
     CDS             3952..4311
                     /locus_tag="ACJJDL_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HGG7574440.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
     gene            complement(4967..5503)
                     /locus_tag="ACJJDL_001771"
     CDS             complement(4967..5503)
                     /locus_tag="ACJJDL_001771"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HGG7574441.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDEEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYTTD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(5537..5893)
                     /gene="folB"
                     /locus_tag="ACJJDL_001772"
     CDS             complement(5537..5893)
                     /gene="folB"
                     /locus_tag="ACJJDL_001772"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HGG7574442.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            5949..6551
                     /gene="plsY"
                     /locus_tag="ACJJDL_001773"
     CDS             5949..6551
                     /gene="plsY"
                     /locus_tag="ACJJDL_001773"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HGG7574443.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAVLTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNILNLIKGKESKIGGSR"
     gene            6628..7473
                     /locus_tag="ACJJDL_001774"
     CDS             6628..7473
                     /locus_tag="ACJJDL_001774"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HGG7574444.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
BASE COUNT         1678 a         2238 c         1794 g         1836 t
ORIGIN      
        1 tgccgtctga aacagtcttc agacggcatt tccatttgca aaaaatcaag cattgtccaa
       61 ggggacgaga atcgtacggt tgccgttgtg ttccggtgcg gacacaatgc cttccgcctc
      121 catctggtca atcagacgcg cggcgcggtt gtagccgatg cgcaaggcgc gctgtacgcc
      181 cgaaatactg gctttgcgcg ttttcaggac aacggatacg gcttcatcat acatcggatc
      241 ggtttcgtcg tcgccgctgc gcccgatgcc gggcagctct tcgctgccgc tgccgctcaa
      301 aatatcgtca acatagtccg gctcgccaaa ctgtttcaaa tattcgacca cgcggtgcac
      361 ctcttcatcc gaggcaaacg cgccgtgaac gcgctgcgga taggcagtac ccggcggcag
      421 gaacagcata tcgccctgac cgagcaggtt ttccgcgccc atttggtcga gaatcgtgcg
      481 gctgtcgatt ttgctggaca cttggaacgc gatacgcgtc gggatgttcg ccttaatcag
      541 acccgtgatg acatcgacgc tggggcgttg tgtggcaaga atcaaatgga tgcctgccgc
      601 gcgggctttt tgtgcgaggc gcgcaatcag ttcctcgatt ttcttgcctg ccgtcatcat
      661 caaatcggca aactcatcga ccacgaccac gataaacggc agtttttcca aaggttcggg
      721 atcgtcgggc gtgaggctga acggattgcc gattttttct ccccttgctg cggcttcggc
      781 gattttttga ttgaagcccg caagattacg cacacccata aagctcatca ggcggtagcg
      841 tttttccatt tcgttaacac accagttcag cgcgtttgcc gccagcttca tatcggtaac
      901 gacaggggcg agcaggtgcg ggatgccttc gtaaatgctc aattccagca ttttcggatc
      961 gatcataatc atacgcacgt cttccggcgc ggctttgaaa agcatagaca gaatcatcgc
     1021 gttgacaccc accgatttgc ccgaaccggt cgtgccggca accaacaaat gcggcgcttt
     1081 tcccaagtcg gttacgacgg gctgtccggt gatgtcctga ccgagcgcga gcgtcagctt
     1141 ggatttggat tcggcaaact cgggcgaatt gaagatttcg ctcaggcgta tcatttggcg
     1201 tttcgggttc ggaagttcca aacccataca ggttttgccg gggatggttt cgacaacgcg
     1261 gatggaagcc acgccgagcg aacgcgccaa gtctttttcc agattcagaa cggaattgcc
     1321 gcgcacgccg acatcgggtt cgatttcata acgcgtaatc acggggccgg aataagaatc
     1381 gacaaccttg accttgactt tgaactccgc caatttttct tcgatggtga tgctgttttc
     1441 caacagttct tcttcggttt gcgtcgcctc gggattgaac agcggcggca gaagcaggtc
     1501 ggttgtcggc aggtgttcgg ataccgcacc ggtctcttcc gattggaacg ccccttcatc
     1561 cgcttccgta tccgataccc ggcaggacgg gcgttcagac ggcacatttt caaacggaca
     1621 aaccgcctga ctgtcatgcc cgaacgcttc ggtttccgac agatattgcc cgcttgaccg
     1681 ctctgccgca ccttcactgc cgtcatctgc aatagcggcg gtttcctcct gccaacctcc
     1741 attcaaaaca tcatcggcaa gatggtcggt ttcggcaatg cggctgcgtt gcgcctgctc
     1801 gaattctgcc ggcggttcat aggtacggtt gtagatttcc gatacgggag gcggcggcgg
     1861 aatatcgatt gcgggcatgg gaactttcgg cacttcgggt ggttcgacca cccaagcatc
     1921 gggcgcagca ggttcttcaa tatagatatc ggcagcttca tcataaaccg gaccgccgta
     1981 tcccacagac gaaacggttt ccgtgaaaac attttcggtt tcagacggca tttcgacatc
     2041 ccgtttcccg acaaccgtcc gactttccgg aatcaggcgc gaaatccgcg cctccgcaga
     2101 aaccgttgcc ttgttcggtt ctttcaaatt gacggaaacg cggcggcagg catcgcggac
     2161 ggctgtgccg tctgaaacgg actgtccttg ggaaacatcc ggggattttg cctccgcctg
     2221 ccctgcatga cggcggaacg gcgcattccg tgcattttcg gctttgactg cagaaaaggc
     2281 agacggatgc tgcttctcaa aatacggctc aaatccgtaa tccgcagact cggaaaacgc
     2341 ttctttgtcc gcatcgaaca tacgggaata cgtgcgttga agcacagggt cgtccaaacc
     2401 gataatctgc agcccttcca tcggggtatc ggacacgcgg actttgggga ccgctgtttc
     2461 gtttttctca aatgcatcga tatagcgttt tttcgtttcc cttaaagccg cgccgtttaa
     2521 ggcacgcgtt gcttcttcca aagtgatttc cttaaaaacc ggacggacgg gcgaaatttc
     2581 gctttcagac ggcatcaacc cttcagcaat actccggtcg aatgggatgc ggcggttgtc
     2641 gattacggca gttgcaatgt cttccgtatc ggcagcctct tcctccgcag cttctgctgc
     2701 ttccgtttcc gcttcttccg tcccgtttcc actgtctgaa tatccgtcgg atgcgttcgg
     2761 aacatccgca cggtttgcag aagcaggcgg aacaggccta tccggttcgg attcgtgcgc
     2821 cagatagttt cggcagaaac ggacgacacc gacgaacagc caatacactg ccgttttgac
     2881 ggcatggaaa agcatcaggg caagttcggg aaaatcgggc ataccgtctt tgatttcagg
     2941 cagctccgcc tgtttttccc ctttcttttc ctgccacgca gaaacctcgc gcatccactc
     3001 gcgttcggat tgtgcgcgga caaaaaacaa gccggcaagc gcaagcaaca aaataacgat
     3061 cataactatc caaaacatat gccgtttccc gcaagacaaa cgattaaacg ggtttatttt
     3121 aacgtgtttc catcccaaaa aaaacaaccg gtcggcaatt ctgccgaaac cgattcggct
     3181 ttcggtttgc ccccaccgac agtataatag ccgtcccttc ccttaatctt tgcggcattg
     3241 ccatgatttt ccaaacagtc tggttttcag atgtggtact gtcggtttcg tggattgtcc
     3301 ttatcctgat actggcagct tccgctccgt cggcattccg ctcgcttgcc cgctaccgtt
     3361 ctgcccttcc cctgtgtacc gtaattttct ccgcggcatg gtgtctgaac gcctctgccg
     3421 gcggcggaca gcttgcacag atgaactacc acctgctcgc cgtcaatcta gttgctctga
     3481 tggtgggcac ttccgccgcc ttttggcttg ccgcgctgct gatgctgccc tactgcctgc
     3541 tgtttgccgg ttctgtcggc gcatatccgc cgaacgcttt ggtgctgatt ctgcccgcgc
     3601 tggccgtcaa ccgcctgtcg cgtatgctgg tcaaccgcct gccacccaat attttcatct
     3661 ttattttcgt caacggcttt ctcgcttccg ccgccggcat tctgctgacc gggctggtgc
     3721 tgaccggtat tttggatgcc gcaaacgctt ttccgtccga aatattgtgg acgaccgccc
     3781 tgcccgtctt tattctgctg gcgtgggcgg aagcttttct cagcggcatt tcaactgcca
     3841 tatttgttgc actgaagccc cattggatca acactttcga cgacaaccgc tatctgaagt
     3901 ccgaccgcgg catatggcgg tagccttcag acggcataga caggcaaaac catgctttcc
     3961 aacatcatcc ccctttccat cggtgcggca ctcggtgcaa cggcgcgttg gctgctcaac
     4021 ctcgccgttc ctgccgccat gtctcccgcc acgggcaacc tgtttgccaa ctggacgggc
     4081 gcgctgctca tcggcatctt tgccgaaacc atcaatcacc cgcaatggaa gctgctgctg
     4141 attaccggtt ttctcggcag cctgaccacg ctttccggat tttcactgga aaccgtaacc
     4201 ctgctccaat cgaatcgtcc tgcttcagca cttgccaata ttttcctaca cacggcaggt
     4261 tcgctgctgc tgacttggct cgggctgaag ataggggcgg cagtcaaata accgcaacaa
     4321 attgcctccc tttgttttga cataatctat aaattagctt cgcttgttta aatactggct
     4381 gtgccaatta tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca
     4441 gatagtacgg aaccgattca cttggtgctt cagcacctta gagaatcgtt ctcttggagc
     4501 taaggcgagg caacgccata ctggtttttg ttaatccact ataccgttct caaattcaaa
     4561 ttgggctttt aggtctataa caaagaaaaa gccttggcag gataaaccta ccaaggcttt
     4621 ttattaaaaa aaacgctcta ttactgtgtc taaaaatgca aaaaaagtaa ccatcataac
     4681 ccttttgcca aaatcaatat catcttccga tgaatgaatt gacggtatat aagaaagaat
     4741 taataagctc ataaaccggt aagaaaaatc agtaacaaag attttcatta ttaaccattc
     4801 ttaaaaatga tcacgttcgt ttgggtaatt attataccct tttccctctt attactaaag
     4861 cacgaatgac tttaaaggac gcgcccagag acaagccgaa aaggcatatc tcatccgcca
     4921 aacaaaatgc ccgccaatct actccggagg gcagttcaac accctgtcaa tccttcatca
     4981 gccagtattg caaaccgatt aatgtcttgc cgtctttaat ttcatcgttt gccaatgcct
     5041 gacggacttc ttctttcgac atcaatacgg tttccgtaat ctcgtcttcg tcattggcaa
     5101 gcgtactgcc caaacgcacg ccttccgcct cgaacagata cattttttcg ttgcaaaaac
     5161 cgaccgccgt ataaaaactg taaagcaggc gtacgctgtc ggtggtataa ggcgtttctt
     5221 cagccagttc tcgtaaagcg catgctgcca tatcctcgcc cgccacatcc agcttgcccg
     5281 caggaagttc caatgtcgcc tgatttgccg cataccgcca ctgccgtacc aaaacgacct
     5341 tttcctcatc cgttaccgcc aacacgcacg ccgcgcccgg atgccggatg acgatacgct
     5401 gcccttcatt gccgttgggc aacctgacct tatccctgct gatgctgacg aaaccgccct
     5461 cgtaaatggt ttcgccgcct aattttactt ccctcaaatc cacttcatat ctcctttccg
     5521 tttcctattc tgccgttcaa tcttcacgct tgccgcgctc gatttccacg ccaacctcgc
     5581 gcacgccttc caaaataccc ggcttgacga ttttcacgcg cacccacacc gcgccgaaat
     5641 atcccaaaac caaatcggca atatattccg ccaacgcttc caaaagcagg aaatcctgtt
     5701 ctttcagatg tcggcgcagc gtttcgcata cctcggcata atgcaccgta ttggcaatat
     5761 cgtcgtccga acccgctttc tcgggaacgc cgatgtccaa atcgacaatc agggtctgca
     5821 accgttcgcg ctcccagccg tacacgccga taagcgtatc cgccttgatg ccgtgcaaaa
     5881 agattttatc cataatccgc cccgtttttt gctaaaataa ccgcaccatt ctaagtaaag
     5941 taccgcaaat gttcaacata ccggctgttg ctgtttccta tctgatcggc tcactttctt
     6001 tcgccgtcat cgtgtccaag tattacggca tggacgaccc gcgcacctac ggatcgggca
     6061 atccgggggc aaccaatgtt ttacgcagcg gcaaaaaaaa ggcggccgtg ctgacgctct
     6121 tgggcgatgc cgccaaaggt ttggttgccg ttttgcttgc acgcgtgctt caagaaccgc
     6181 tcggtttatc cgacagcgca atcgctgccg tcgcactcgc cgcgctggtc ggacatatgt
     6241 ggccggtgtt tttcggattt aaaggcggca aaggcgtggc aacggcattg ggcgtgcttc
     6301 tggcactctc tcccgcaact gccttggtct gcgcgttgat ttggcttgtg atggcattcg
     6361 gcttcaaggt gtcctccctt gccgcattaa ccgccacaat cgccgccccc cttgccgcac
     6421 tgttttttat gccgcatact tcttggattt tcgcaaccct cgcaatcgcc atattggtgt
     6481 tgctccgcca taagagcaac atcctcaacc tgattaaagg caaagaaagc aaaatcggcg
     6541 gcagccgctg atttcccatc catccctgtt tatgccgtct gaaccccgct tcagacggca
     6601 tccgaatatc ccgccgtttt accgactatg ctcagttaca gacacgcatt ccacgccggc
     6661 aaccacgccg atatgctcaa acacttcacc ttgtttttag tgctgcaata tttcaaccgc
     6721 aaagacaagc cctactggta catcgacacg cacggcggcg cgggtgtgta caatctcgaa
     6781 ggcagcgagg cacaaaaagt cggcgaatac cggcaaggca tcgccctact tcgacaagca
     6841 aaaaacctgc caaccgagtt aaacggcttt atcgcgcaca tacaaaaaat cctgccctcg
     6901 cccgaacttt actgcggttc tccgtggctg gcgcaatcgc tgacccgcgt cggcgacaaa
     6961 ttacgcctgt ttgagctgca ccccaccgac tttgtccatc tgcaaaacaa tatgggcgaa
     7021 gcaggattgg gcaaacgcgg acaagtgttg cgcgaagacg gttacaaagg gctgatttcc
     7081 ctgctgccgc ccccgccgcg ccgcgccacc gtcctcatcg acccgcccta tgaggaaaaa
     7141 caggactacc ggcgtgtaac ggaaacgctg aaagccgctt taaaacggtt tgagtccggc
     7201 tgttatctca tttggtatcc ctgcctcagc cgcgaagaaa gccgcaagct gcccgaagaa
     7261 ttgaaaaaac tcctgcccga caactacctt cacgccgaac ttcacgtcca cgcgccgaaa
     7321 gccgacggtt tcggtatgca cggcagcgga atgttcgtca tcaatccgcc ctatctgttg
     7381 gcggaacaat tggcggcaaa cctccccgcc ctgacgcggc tgctggcgca agacgaaggc
     7441 gcgcgctacc ttttggacag caaaatccgc tgaccccgat gccgtctgaa acccttcaga
     7501 cggcatctcc catcaaacaa aaccggacga tataccggca gccggc
//
LOCUS       DBBZYD010000099         7501 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.099, whole genome shotgun sequence.
ACCESSION   DBBZYD010000099 DBBZYD010000000
VERSION     DBBZYD010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7501
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.099"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(190..468)
                     /locus_tag="ACJJDL_001775"
     CDS             complement(190..468)
                     /locus_tag="ACJJDL_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574445.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
     gene            complement(475..693)
                     /locus_tag="ACJJDL_001776"
     CDS             complement(475..693)
                     /locus_tag="ACJJDL_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HGG7574446.1"
                     /translation="MKFINTCRKYGAKLAVVTAAPLALAAHANATLPDTAKNALEAAK
                     ADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            complement(767..964)
                     /locus_tag="ACJJDL_001777"
     CDS             complement(767..964)
                     /locus_tag="ACJJDL_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574447.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            complement(969..1259)
                     /locus_tag="ACJJDL_001778"
     CDS             complement(969..1259)
                     /locus_tag="ACJJDL_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574448.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQPVKKG"
     gene            complement(1304..2647)
                     /locus_tag="ACJJDL_001779"
     CDS             complement(1304..2647)
                     /locus_tag="ACJJDL_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HGG7574449.1"
                     /translation="MEDKQGMTKAVVGVMTDALADGRKPATASNLPPLSNRGGTETET
                     AGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVRVS
                     LLEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDVLYGRVHFGGQNN
                     TILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRN
                     KGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKT
                     STWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFVQKATRIHAVKEDKVISAD
                     RYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQA
                     IHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
     gene            complement(2732..3256)
                     /locus_tag="ACJJDL_001780"
     CDS             complement(2732..3256)
                     /locus_tag="ACJJDL_001780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574450.1"
                     /translation="MEGIMLLKVVPERTVSADAKTRDPMWDNAALQTSEGVNFIARFL
                     GFFSDGEYRYVDVLQPNHSDIIRYSGKDFPINQILNHIHPARYAVTFENNVDSKLRRH
                     WVAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAILCNKERLTSSEPLS
                     DFVLSVLKPYIFRP"
     gene            complement(3235..3588)
                     /locus_tag="ACJJDL_001781"
     CDS             complement(3235..3588)
                     /locus_tag="ACJJDL_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574451.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            3824..5251
                     /locus_tag="ACJJDL_001782"
     CDS             3824..5251
                     /locus_tag="ACJJDL_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HGG7574452.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            5320..6723
                     /locus_tag="ACJJDL_001783"
     CDS             5320..6723
                     /locus_tag="ACJJDL_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HGG7574453.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(6859..7501)
                     /locus_tag="ACJJDL_001784"
                     /pseudo
     CDS             complement(6859..7501)
                     /locus_tag="ACJJDL_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153708080.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT         1877 a         1793 c         1869 g         1962 t
ORIGIN      
        1 ttgctagacg gctgatattt ataaagtgcc aactgcgcct gagtgataaa cggcttgttc
       61 atggttctgc ctttcaatga ttgttttgaa agcctgattt tgacaccata acttcatgcg
      121 ctcaattctt aaacagaacc gccccgatta atacgggtac ggaaacgccg agataaaaat
      181 aaaaatccat catttcaaaa cctttttcag cagggaaaca aagtaaacgg acgcgaggat
      241 gccgaatact atccaacctg tttcaagacc gctttgcagg ttgtctttcg gactgcattc
      301 cgccaataaa agccttagcg gctgaccgtc cgacatcttc cacaggctgc cgttatattc
      361 cggcctgaca atctgtccgt tttctttgat tcttggtact accaagctga aataaaggtt
      421 ttcagcctgg tgcttctcaa gacatttatt tccgacttgg tagtacatgc cgtcttactt
      481 catcactctc ttaacgatgg aaaacacaaa aagcgcggcg aaaacgccaa cgacaatcca
      541 accggcttcc ataccgtccg cttttgcggc ttccaaagcg ttttttgccg tatcgggcaa
      601 cgttgcattt gcatgtgcgg ccaaagccag gggagcagct gttacaacag ccagttttgc
      661 gccgtattta cggcaggtgt taataaattt catgatattt tcctttaaaa agtgtttggc
      721 ggtaatggat ggagcgtttt tcagacgacc gccgaacatc cgaaaatcag tctttcaaaa
      781 atccgaatac gacaaattcg tattggttgc cgatttcttc caaacctgcg ttaatcgctt
      841 cttcgaagtc gtagaaataa tcggcattgg tgattaattt ggtatgtccg atgtcgcccg
      901 tttcaggaga gagatacaga aagtcccctg ttgatacgga ctggacaaca tagactttct
      961 gcattcaatc agcctttctt aacgggttga aaaccgatga ctttcagttt ttgggttttg
     1021 cccgtagtga cgatttctac gttcaggttt gcttcgatcg gaaattgggc gtttcggaac
     1081 tgctcgaaat tggcagagcc gccgaaatcg tattcagtag tagagctgcc caatgcgttg
     1141 ccttgggagc tgtctaaggg tgtggcgaca atcaggcggc aatagtcgaa gctcttgcct
     1201 tcgatttgtc cgttgaattt tttaacgccg acgatgtggc cttgaagttg gatgttcatt
     1261 ttttggtttc cttgtgtgat taaacgtctt tcgggcagac actttaagcc catgaaatcg
     1321 gtagtcttgc gaatttgtcg taaatgaagt tgttatagct ttcttcattg ttgacgtgtt
     1381 tttgctgttc aagctgtttt tcaagattct cgtaatattc gtacatatag taagggtctt
     1441 tgtacggttt gaatgcgggc tgttcatgaa tggcttgagc tttcaaaaag gcgcagtcgt
     1501 aggcttcggg agccaaagac ttgggcagct tgtgatgact cggctcaatc agttcaaaca
     1561 gtttggcttt gtccaattcg ggaaaaatga atttcagacc gtttgccgca cgtccaaact
     1621 gtttttttac ccattcaagg tagcggtcgg ctgaaatgac cttatcttcc ttaaccgcgt
     1681 gtatgcgcgt tgccttttgg acgaatcgtt cgcaaatcgg atatgcgccg ccgaaatatt
     1741 cgcccggatt ctgcaaaact tcaaaaggga taacgatgtc ttttgctttg aattcaattt
     1801 caaagcgcgt ccatgtgctt gttttatcgc ccaactgctt gcctttttca tagacgcgga
     1861 catatttgga cgattcacgg gagccgatac cataggtctt gcctttggtc attttggctt
     1921 catcgtcttc ttcccaatct gaccccaaac attcgccttt tggtttgacg tgatgacagg
     1981 taaacatacc tttatttcgg tcttcacggg cttggttcgg gctgtattcg ccgttgaaaa
     2041 agtcttttgc gatgtcaacg cgtgtgattt ttgggcggat tgcattagtc aggaatgcga
     2101 aaagtcgtga ttcccagcct tcttttgcga cgccgcaacc ggtgccggtc agttcgaaaa
     2161 ggatggtatt gttttgtccg ccaaaatgga cgcgaccgta taggacgtct tccgaaccca
     2221 tcaaccaaca gcgctcataa aaacgaccgc ccgagccttt ggactctttg tagataccga
     2281 aaccgaaaac ttcttcggcg agcatggacg cggcgcgaat gaaatcttcg tcttccaaaa
     2341 gacttacacg aacgccgtat ttatcgaaaa aggttttttc atgaaatgaa aagctaattt
     2401 gatcaatgaa agccgaatct gatacaccgc gccgaagagg aacgcctaac aggtttcctt
     2461 taccgtccgt tatgtacgtt tcgtaacatt cgaagacttc ctgaaccctg cctgccgttt
     2521 cggtttctgt accccccctg ttagataagg ggggaagatt tgaagcggtt gccggcttcc
     2581 tgccgtccgc taacgcgtcc gtcatcacgc cgacaaccgc ctttgtcatc ccttgcttat
     2641 cttccatggt gcgaatcctc aaaaacgggc aaaaaaaagc cctgttactt gtagaaagta
     2701 aagggcgtta atttttgtta atcgtccctt cttagggacg aaatatataa ggttttaaaa
     2761 cgctaagaac aaaatccgat aacggctctg aagaagtaag tctttcttta ttgcacaaga
     2821 tagcaaactt ccacggcatt ctcgccccac ccgtgccgtc caagcctttt tcaaagacat
     2881 agatggtttt cttggcaatc acttcgtcag tttggcggtc gataatccgt atggtcgcac
     2941 ctgccaccca gtgcctgcgc agcttggaat cgacattgtt ttcgaacgtt accgcataac
     3001 gggcggggtg tatatgatta agtatttgat ttatcggaaa atctttacct gaataccgaa
     3061 taatatcgga atggttgggt tgcaggacat ccacatagcg gtattcccca tcgctaaaaa
     3121 atcctaggaa acgagcaata aaatttacgc cttcgctggt ctgtaaagcc gcattgtccc
     3181 acatcgggtc tctggttttt gcatctgccg aaacggtacg ctcaggtact accttcaaca
     3241 gcataatccc ttccacattg tccgccgtct ggtaaatctt tcccccgccg ttttgcattg
     3301 ttcgttaaac acggcttcgg cttctttgta ttttctgtcc cactcttctt gtgcctgtat
     3361 ttcttctttg atcgggccga attgtttggg aataatccaa acaaacagca tcaggatagc
     3421 ggcggcggtc aggctgcctg aaaggatttt gccggggttc cgtttgggct ttttataggc
     3481 aaagcggacg agaaaccaaa gcaacagcag catggtgccc caatagccga ttgagaatag
     3541 gatggccaaa ccttctagga aatggcgtaa atcgtttgtg gtaaacatgg gttgttcctg
     3601 tggttaaatg tgcaggctgc tttttgccga accttgccgc atctcaaaag cagcctgcgc
     3661 ttcagcgttg cgttacgcag taaaataatg aatatttgta acgacttggg tattttttgt
     3721 caatattccc gcctttccct taacagctgc cgcgctttcc gttaaaattc ctttacatat
     3781 ttatattgtt tcctgtttct atattgccaa ggttataccc gttatgtttt tctccgccct
     3841 gaaatccttt ctttctcgat acattactgt atggcgcaat gtttgggcgg tgcgcgacca
     3901 gttggaaccg cccaaacgca cggcggaaga acaggcgttt ttgcccgcgc atttggaact
     3961 gaccgatacg ccggtctctg ccgctccgaa atgggcggcg cgttttatta tggcgtttgc
     4021 gcttttggct ttgttgtggt cctggttcgg caaaatcgat attgtggcgg cggcttcggg
     4081 caaaacggtg tcgggcgggc gcagcaaaac catccagccg ctggaaacgg cggtggttaa
     4141 ggcggtacat gtgcgcgacg ggcagcatgt gaaacaggga gaaacgctgg cggaactgga
     4201 ggctgtggga acagacagcg atgtggtgca gtcggagcag gctttgcagg ctgcccaatt
     4261 gtccaaactg cgttatgaag cggtattggc ggcattggaa agccgtaccg tgccgcatat
     4321 cgatatggcg caagcacggt ctttaggtct ctccgatgcc gatgtgcaat cggcgcaggt
     4381 gttggcgcag caccagtatc aggcatgggc ggcgcaggat gcgcaattgc agtcggcttt
     4441 gcgcggccat caggcggaat tgcagtcggc caaggcgcag gagcagaagc tggtttcggt
     4501 gggggcgatc gagcagcaga aaacagcaga ctaccgccgt ttgcgggccg acaattttat
     4561 ttcggaacat gcgtttttgg agcagcagag caaatcggtc agcaattgga acgatttgga
     4621 aagtacgcgc ggtcagatga ggcagattca ggcggccatt gcacaggcgg agcagagtcg
     4681 ggtgctgaat acgcagaacc tgaaacgcga tacgctggat gcgctgcgcc aggcaaacga
     4741 acagattgac caataccgcg gccaaacgga taaggcaaag cagcggcagc agctgatgac
     4801 aatacagtcg cctgcggacg gcacggtgca ggaattggcc acctatacgg tgggcggtgt
     4861 ggtgcaggct gcccaaaaaa tgatggtggt tgcgcccgat gacgacaaaa tggacgtgga
     4921 agttttggta ttgaacaaag acatcggttt tgtggaacag ggacaggatg cggtggtgaa
     4981 gattgagagt tttccctata cgcgctacgg ttatctgacg ggcaaggtga aaagtgtcag
     5041 ccatgatgcg gtaagccacg aacagttggg cttggtttat acggcggtgg tgtcgctgga
     5101 caaacatacc ttgaatattg acggcaaagc agtgaatctg acggcgggca tgaatgtcac
     5161 ggcggagatt aaaacgggta aacggcgggt gctggattat ctgttaagcc cgctgcaaac
     5221 caaattggac gaaagcttta gggagcgata ggcggatccg tactgggcat ttgttatccg
     5281 ccggttcgga catgcagact gcctgaaacc attgcccgga tgacattgct caatctaatg
     5341 ataatgcaag attacggtat ttccgtttgc ctgacactga cgccctattt gcaacatgaa
     5401 ctattttcgg ctatgaaatc ctatttttcc aaatatatcc tacccgtttc actttttacc
     5461 ttgccactat ccctttcccc atccgtttcg gcttttacgc tgcctgaagc atggcgggcg
     5521 gcgcagcaac attcggctga ttttcaagcg tcccattacc agcgtgatgc agtgcgcgca
     5581 cggcaacaac aagccaaggc cgcattcctt ccccatgtat ccgccaatgc cagctaccag
     5641 cgccagccgc catcgatttc ttccacccgc gaaacacagg gatggagcgt gcaggtggga
     5701 caaaccttat ttgacgctgc caaatttgca caataccgcc aaagcaggtt cgatacgcag
     5761 gctgcagaac agcgtttcga tgcggcacgc gaagaattgc tgttgaaagt tgccgaaagt
     5821 tatttcaacg ttttactcag ccgagacacc gttgccgccc atgcggcgga aaaagaggct
     5881 tatgcccagc aggtaaggca ggcgcaggct ttattcaata aaggtgctgc caccgcgctg
     5941 gatattcacg aagccaaagc cggttacgac aatgccctgg cccaagaaat cgccgtattg
     6001 gctgagaaac aaacctatga aaaccagttg aacgactaca ccgacctgga tagcaaacaa
     6061 atcgaggcca tagataccgc caacctgttg gcacgctatc tgcccaagct ggaacgttac
     6121 agtctggatg aatggcagcg cattgcctta tccaacaatc atgaataccg gatgcagcag
     6181 cttgccctgc aaagcagcgg acaggcgctt cgggcagcac agaacagccg ctatcccacc
     6241 gtttctgccc atgtcggcta tcagaataac ctctacactt catctgcgca gaataatgac
     6301 taccactatc ggggcaaagg gatgagcgtc ggcgtacagt tgaatttgcc gctttatacc
     6361 ggcggagaat tgtcgggcaa aatccatgaa gccgaagcgc aatacggggc cgccgaagca
     6421 cagctgaccg caaccgagcg gcacatcaaa ctcgccgtac gccaggctta taccgaaagc
     6481 ggtgcggcgc gttaccaaat catggcgcaa gaacgggttt tggaaagcag ccgtttgaaa
     6541 ctgaaatcga ccgaaaccgg ccaacaatac ggcatccgca accggctgga agtaatacgg
     6601 gcgcggcagg aagtcgccca agcagaacag aaactggctc aagcacggta taaattcatg
     6661 ctggcttatt tgcgcttggt gaaagagagc gggttagggt tggaaacggt atttgcggaa
     6721 taaagcaggc tgaaacggtt atgaaattcc caaagcagcc tgcaccccgt ttcgaaagtg
     6781 caggctgctt tgggattgat ccgatacttt cacattctca ttgcctttaa ataaagcaca
     6841 gttaaaaaca catttaaatt aagtgcgaat taattcaaat gtatattcaa ttaaaatcaa
     6901 aataggacag tagtgcatcg tcaaatcggg cgtaatcaga caaaacggtt cgcagatacc
     6961 gcttaatatt cgcccacact ttctcaatcg ggttgagctc aggtgaataa ggtgcaagag
     7021 gcaatacctt atgtcccaat ttttccgcca tttcccgtaa gacacccata cggtgaaatc
     7081 gcgcattatc taaaataatc accgattttt gagtcaatgc gggcagtagg cattgctgaa
     7141 accacgcttc aaaaaagact ccggtcatcg tattttgata aaccatcgga gcaatcagcc
     7201 ggttgccgac ttgtgcggac accaaagata agcgttggta tctttttcca cttatctgcg
     7261 ctttcactat ttgccctttc aggctgcggg catagggacg gaacaggtag cggtcaaatc
     7321 ctgtttcatc caaataaaca cgttggtagt cggaaaattc ggccggctgt gtcaaataat
     7381 gcgttacttt ggccgggtct tgttctttgt aagtggtggt ctttttttgc gcgttatccc
     7441 catctgtttg agtgcatagc aaatggtggc tgccgtacaa tcaaaatgtt tggcgatttc
     7501 a
//
LOCUS       DBBZYD010000100         7459 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.100, whole genome shotgun sequence.
ACCESSION   DBBZYD010000100 DBBZYD010000000
VERSION     DBBZYD010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7459
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.100"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(538..645)
                     /locus_tag="ACJJDL_001785"
     CDS             complement(538..645)
                     /locus_tag="ACJJDL_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HGG7574454.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKIGMVVFIVD"
     gene            complement(659..1111)
                     /gene="rplI"
                     /locus_tag="ACJJDL_001786"
     CDS             complement(659..1111)
                     /gene="rplI"
                     /locus_tag="ACJJDL_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HGG7574455.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            complement(1128..1358)
                     /gene="rpsR"
                     /locus_tag="ACJJDL_001787"
     CDS             complement(1128..1358)
                     /gene="rpsR"
                     /locus_tag="ACJJDL_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HGG7574456.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            complement(1365..1667)
                     /gene="priB"
                     /locus_tag="ACJJDL_001788"
     CDS             complement(1365..1667)
                     /gene="priB"
                     /locus_tag="ACJJDL_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HGG7574457.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHKSWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            complement(1668..2036)
                     /gene="rpsF"
                     /locus_tag="ACJJDL_001789"
     CDS             complement(1668..2036)
                     /gene="rpsF"
                     /locus_tag="ACJJDL_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HGG7574458.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            complement(2192..3142)
                     /gene="trxB"
                     /locus_tag="ACJJDL_001790"
     CDS             complement(2192..3142)
                     /gene="trxB"
                     /locus_tag="ACJJDL_001790"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HGG7574459.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            3281..5443
                     /locus_tag="ACJJDL_001791"
     CDS             3281..5443
                     /locus_tag="ACJJDL_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG7574460.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAYGMAHVYFEVGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRNGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMYAVAVLVIACPCALGLATPAAIMVGMG
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGSPQVAAVYCVPDSGFDEDALYRI
                     AAAVEQNAAHPLARAIVSAAQARGLDIPAAQNAQTVVGAGITAEVEGVGLVKAGKAEF
                     AELALPKFLDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALSVSRATLRNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            5498..7384
                     /gene="uvrC"
                     /locus_tag="ACJJDL_001792"
     CDS             5498..7384
                     /gene="uvrC"
                     /locus_tag="ACJJDL_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HGG7574461.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSEAEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYHDSVREAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFSVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
BASE COUNT         1890 a         1962 c         1851 g         1756 t
ORIGIN      
        1 tttttaggat gtattttgac aatctgttga tttcaactgc ttgcaaggga aaaggccatt
       61 atttttcggt caatcaggaa gttatcctat tgaacatttt gaaacaaagt atgttatcag
      121 caccatattg aaacacagcc aaattttatg cccgatacca ttttcaaaat aaataatccc
      181 ctgattttca cagatttctc aaaatcagaa aagtttttgt caattgaata ttttggctgt
      241 gttttagtaa tctgttgatt tcaattattt gcaagggaaa agacaattat tttttcggtt
      301 aggaagagat ctatcctatt gagtatattg aagccaggta cgcttatcaa cactatatta
      361 aaacacagcc aatatttttt ggcgcatttt atgcatcaaa tttcgttaac aaactattcc
      421 tgcaaagacc acaggcaaat atagtggatt aacaaaaatc aggacaaggc gacgaagccg
      481 cagacaatac agatagcacg gcaaggcaag gcgaggcaac gctgtactgg tttaaattta
      541 atccactata aaaacaacca tcccgatttt tgcagaatat acggaaaaca aaacaaatac
      601 cgtctgaaac cacattccga caatcggcag ggtttcagac ggcatctgat aatttcaatt
      661 actcggttgc ggcaacgacg gcaacggtaa ttttagcaac ggcatcagtg tgcaaagcca
      721 cttccacttc gtactcgcca acggctttca gaggaccgtt cggcagacgt acatttgctt
      781 tcacggcttc gatgccggca gcaacgattg cagcagcaat gtcggcattg gtaacggaac
      841 cgaacaggcg gccgtccaca ccggcttttt gagcaacggt aacggtttga ccgtccaatt
      901 tttcctgacg gactcgggca tctgccaaaa tttcagcctg tttggcttcc aattcggcac
      961 ggcgtgcttc aaactctttc atattcgctt cggtcgcacg ttttgcctta cctgcgggaa
     1021 ttagaaagtt gcgggcgtag ccgtttttaa cggttacgat gtcgcccaag ttgcccagac
     1081 cgccgatttt ttctaacaga ataatttgca tgattcaatc tccaaaatta tttgtgttgg
     1141 tcggtgtaag gcagcagagc caggaagcgt gcgcgtttta cggcaacagc caattggcgt
     1201 tggtagaatg ccttcgttcc tgtgatgcgt gcaggaatga ttttaccgtt ttcagagata
     1261 aagtctttca gcaaatcaac ttgtttgtaa tcgacttctt ggattttttc agccgtgaaa
     1321 cggcagaatt ttctacgttt gaatgattga cgagccattg tcgtttaacc tttatattct
     1381 tgaatatttt gtatcctgag catcggcata agggaacgtc tgcttttttg agctaaaaaa
     1441 ccttcgacgt gaacatatac accttgccga tactgccact cttccgcctg cctgcctaaa
     1501 atccgtgccg gaatttccaa ttggacaagg cattgctgcc cgttttcctc ctgccacgat
     1561 ttgtgcttta aaataatatc taaaacaggg attccggcag gcgtatatcg aatagggaaa
     1621 accttttcaa ttaacgcggc aagcgaaaca agattattga atcccaatta ttgggcgacc
     1681 gcttcttcag acgcaccgct caacaggttc ttagcctttt caccacccaa cataggggat
     1741 gcttcggtaa cggcgtgttt ggttttgatg gttagatggc gcaatacggc atcattgaag
     1801 cggaatgcgg tttccagctc ttcaaccact tcgggagtgg tttcgatgtt catcaaaacg
     1861 taatgggctt tatggatttt gttaatcggg taagccagtt ggcggcgacc ccaatcttcc
     1921 aaacggtgaa tcttaccgtt tgcttcggca atcatggttt tgtaacgttc aaccatagca
     1981 ggcacttgct cgctttgatc aggatgaacg ataaacacga tctcgtaatg acgcatgtta
     2041 tctccttatg gatggtaaaa acagccttct gccatgcgaa agcagaaagc aaggttcaaa
     2101 gagcaggcat tatattgggg tttgccgacg gaatcaagga tttggtgcga aaaatttgca
     2161 ttccgccgaa aatttcggtt tcagacggca ttcaaatgtt ttggctgccc agccagcgtt
     2221 ccgcgtccaa agccgcctga cagccggaag ccgcgctggt aatcgcctga cggtaggtat
     2281 ggtcttttac gtcgcccgcc gcccatacgc cttcgatatt ggttgcgccg acattgtccg
     2341 ccgtgccgcc tttggttttc aggtaaccgg cttcgtccat ttccaactga cctttgaaaa
     2401 tatcggtatt cggcttgtgc ccgatggcga taaaaatgcc gctgacggca atttgttgct
     2461 cagaaccgtc gttgtttttt aataatgcgc cgtttacgcc ccgatcgtcg cccagtactt
     2521 cttgcaggtt gctttccagc ttgaggatga ttttgccctc ttccacgcgt ttcatcagtt
     2581 tgtcgatcat gattttttcg gcacggaact cgctgcggcg gtggatcagg gtaacggttt
     2641 tggcgatatt ggcaaggtag agtgcctctt caactgccgt attgccgccg ccaactacgg
     2701 caacatcttg gtttttgtag aagaaaccgt cgcaggtggc acaagcggaa acgccttttc
     2761 ctgcaaacgc ttcctcactc ggcaaaccga ggtatttggc ggacgcgcct gttgcgacaa
     2821 tcagggcatc gcaagtgtac tcgcccatat cgcctttgag tgtaaacggg cgtttttgca
     2881 gatcgacggc gttgatttgg tcaaaaatga tttccgttcc gaaacgttcg gcgtgggcga
     2941 gaaaccgcgc catcaattcc ggcccttgca cgccgtcggc atcggcaggc cagttgtcca
     3001 cttcggtggt ggtcatcagt tgcccgcctt gcgcgatacc tgtaataatg acggggttta
     3061 aattggcacg cgcggcatag acggcggcgg tgtatccggc ggggccggaa cccaaaataa
     3121 tcagtttgcg gtgttgggac attgtttttc ctttgctgtg tcaagttttc ggattctact
     3181 cgaattatcg gcgcgtttga gaaatttcga ccataccggc gctcagacgg catcccgcag
     3241 ccttaactgc cgtctgaata tcaaagcagg aatcacgctt atgcaacaaa aaatccgttt
     3301 ccaaatcgaa ggcatgacct gccaggcctg cgcttcgcgc attgaaaaag tgttgaacaa
     3361 aaaagatttt gtcgaatcgg cgggggtaaa cttcgccagc gaagaggcgc aggtagtgtt
     3421 tgacgacagc aaaacctcag tagccgacat tgccaaaatc attgagaaaa ccggttacgg
     3481 cgcgaaggaa aaaacggaag atacattgcc gcaacccgaa gcagaacacc atatcggctg
     3541 gcggctgtgg ctgctgttca ccatcaacgt cccgttcctt atcggcatgg cggggatgat
     3601 gatcggcaga cacgattgga tgattccgcc gttgtggcag ttcgcattgg caagcgtggt
     3661 gcagctttgg ctggcaatcc cgttttacaa aagcgcgtgg gcgagcatta agggcggact
     3721 ggcgaatatg gacgtgctgg ttaccatcgg cacggtctcg atttacctgt attccgtcta
     3781 tatgctgttt ttcagcccgc acgcggcgta cggtatggcg catgtgtatt ttgaagtggg
     3841 cgtgatggtg atcggttttg tgtcactggg taaatttttg gaacaccgta ccaaaaaatc
     3901 cagcctcaac agcttgggct tgctgctcaa acttacacca acccaagtca acgtgcaacg
     3961 caacggcgaa tggaaacagc ttcccatcga ccaagtgcaa atcggcgacc ttatccgcgc
     4021 caaccacggc gaacgcattg ccgcagacgg catcattgaa agcggcagcg gttgggcgga
     4081 cgagagccat cttaccggcg aatccaatcc tgaagaaaaa aaggcgggcg gcaaagtgtt
     4141 ggcgggcgcg ttaatgaccg aaggcagtgt ggtgtaccgc gccacgcagc tcggcagcca
     4201 aacccagctc ggcgacatga tgaacgcgct ctctgaagca caaggcagta aagcaccgat
     4261 tgcgcgcgta gccgataaag cggctgcggt attcgtgcct gccgtcgtgg gcattgcgtt
     4321 gttgactttt attgttactt ggctgattaa gggcgattgg acggttgcgc tgatgtacgc
     4381 cgtcgccgtt ttggtgattg cctgcccgtg cgcgctgggt ctggcaaccc ctgccgcgat
     4441 tatggtcggt atgggcaaag cggttaaaca cggtatttgg tttaaagacg cggcagcaat
     4501 ggaggaagcc gcccacgtcg atgccgtcgt gttggacaaa accggtacgc tgaccgaagg
     4561 cagcccgcag gttgccgccg tttattgcgt tcccgacagc ggctttgacg aagacgcttt
     4621 gtaccgcatc gccgccgccg tcgaacaaaa cgccgcccat ccgctcgccc gtgccatcgt
     4681 ctccgccgcc caagcgcgcg gtttggacat tcccgccgca caaaacgcac aaaccgttgt
     4741 cggcgcaggc attaccgccg aagtggaagg cgtgggtttg gtgaaagcag gcaaagccga
     4801 atttgccgaa ctggccttgc cgaagttttt agacggcgtt tgggatattg caagcattgt
     4861 tgcggtctca gtcgataaca aacccatcgg cgcattcgca cttgccgacg cgttgaaagc
     4921 cgataccgcc gaagccatag gccgtctgaa aaaacacaat atcgatgtct atattatgag
     4981 cggcgacaac caaggcacgg tcgaatacgt cgccaaacaa ctgggcatcg cacacgcctt
     5041 cggtaatatg agtccgcgcg acaaagccgc cgaagtgcag aaactcaaag ccgccggcaa
     5101 aaccgtggcg atggtcggag acggcatcaa cgacgcacct gcgctcgccg ccgccaacgt
     5161 tagcttcgcc atgaaaggcg gcgcggacgt tgccgaacac accgcatccg ccacgctgat
     5221 gcaacattcg gtcaaccaac tcgccgatgc cctatcggta tcgcgggcga cgttgagaaa
     5281 catcaagcaa aacctgtttt tcgccttctt ctacaatatt ttgggcattc cgcttgccgc
     5341 gctcggtttt ttaaaccctg tcatcgcagg cgcggcaatg gcggcaagct cggtttccgt
     5401 gttgagcaac gccttgcgcc tgaaacgggt aaaaatcgat tgaccgcata taaccacccg
     5461 acagcttttc cgaacggata aggctgccgc tgccgatatg ccgtctgaag ccgtttttca
     5521 aatgattgat atgaatacag aaaaccgttc tccggaacaa ttcgacatcc cgctcttcct
     5581 caaaaacctg cccaagctgc cgggcgtgta ccgttttttt gacgaaggcg gcaaagtctt
     5641 atacgtcggc aaagcggtca acctcaagcg gcgcgtgtcc ggctatttcc aaaaaaacga
     5701 ccattcgccg cgcatcgcat tgatggtaaa acaggtgcat catatcgaaa ccaccatcac
     5761 gcgttccgaa gccgaagcac tgattctcga aaacaacttc attaaagctc tgtcgccgaa
     5821 atacaatatt cttttccgcg atgacaaaag ctatccttat ttgatgctca gtggccatca
     5881 atatccgcaa atggcgtatt accgcggcac actgaaaaag ccaaatcaat atttcggccc
     5941 gtatcccaac agcaacgccg tgcgcgacag tattcaagtg ttgcaaaaag tctttatgct
     6001 gcgtacctgc gaagacagtg tattcgagca ccgcgaccgt ccttgtctgc tttaccaaat
     6061 caaacgctgt accgcacctt gtgtcggtca tatcagcgaa gaagattatc acgacagcgt
     6121 gcgtgaagca gcaactttcc tcaatggcaa aaccgacgaa ctgacgcgta ccctgcaaca
     6181 caaaatgcaa accgccgccg ctaatctgca atttgaagaa gccgcccgct accgcgacca
     6241 aatccaagca ctcggcatta tgcagagcaa ccagttcatc gacagcaaaa acccgaacaa
     6301 ccccaacgac atcgacctgc tcgcgctcgc cgtttcagac ggcctcgtct gcgtacactg
     6361 ggtcagcata cgcggcggac ggcatgtagg cgataaaagc tttttccccg acaccaaaaa
     6421 cgatcccgag ccaaacggac aagattacgc cgaagccttc gtcgcccaac attatttggg
     6481 caaaagcaaa cccgacatca ttattagcaa cttttccgtt cccgatgcgc tgaaagaggc
     6541 tttggaaggc gaacacggca agcagatgca atttgtcacc aaaaccatag gcgaacgcaa
     6601 agtctggttg aaaatggcgg aacaaaacgc acaaatggcg attgcacaac gccgcctgca
     6661 acaaagcagc cagcaacacc gcattgatga actggcaaaa atcctcggca tggattcaga
     6721 cggcctcaac cgccttgaat gtttcgacat cagccacaca caaggcgaag ccactattgc
     6781 gtcctgcgtt gtgtacgatg agcaaaacat ccagccttcg caataccgcc gctacaacat
     6841 cacgaccgcc aaacccggcg acgactacgc cgccatgcgc gaagtgttga cgcgccgtta
     6901 cggcaaaatg caggaggccg aagccaacgg cgagaccgtc aaatggccgg atgccgtgtt
     6961 gattgacggc ggcaaagggc aaatcggcgt agccgtatcg gtatgggaag aactcgggct
     7021 gcacatccct ttggtcggca ttgccaaagg cccggagcgc aaagccggta tggaggagct
     7081 catactgcct tttaccggcg aagtcttccg cctgccgccc aacagcccgg ccttgcatct
     7141 attgcaaacc gtacgcgatg aatcgcaccg tttcgccatt accggtcacc gcaaaaaacg
     7201 cgacaaagcc cgcgttacct cctccttaag cgacatcccc ggcgtaggca gcaaacgccg
     7261 ccaagccctg ctcacccgct tcggcggtct gcgcggcgtg attgccgcca gccgcgagga
     7321 cttggaaaaa gtggaaggca tcagcaaggc attggcggaa acgatttaca atcatctgca
     7381 ttagcatgct gtcaaagaca aaatccgtct gtaaaaaata tgatacagca ggtcggtata
     7441 ccgatatata gtggattaa
//
LOCUS       DBBZYD010000101         7346 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.101, whole genome shotgun sequence.
ACCESSION   DBBZYD010000101 DBBZYD010000000
VERSION     DBBZYD010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7346
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.101"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            49..1557
                     /gene="nadB"
                     /locus_tag="ACJJDL_001793"
     CDS             49..1557
                     /gene="nadB"
                     /locus_tag="ACJJDL_001793"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HGG7574462.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRTILSQGKLAIEWLLAQGVAFDQ
                     NNNGLHLTREGGHTCRRIAHVADYTGEAVMQSLTVQIRCRPNIRVCEQQMALDIQTES
                     GAACGLTVLDCRTQATYSIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARSSENGRTFLISEAVRGEGGILTNQAGERFMPYYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYSLGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAKTSPRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRC
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            complement(1735..2400)
                     /gene="pgmB"
                     /locus_tag="ACJJDL_001794"
     CDS             complement(1735..2400)
                     /gene="pgmB"
                     /locus_tag="ACJJDL_001794"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HGG7574463.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRRKNDNYLEMIQAVKPEDVYLGILPLLEA
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPIGVGKAEDLGSDIALVSDTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(2413..4671)
                     /locus_tag="ACJJDL_001795"
     CDS             complement(2413..4671)
                     /locus_tag="ACJJDL_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HGG7574464.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFNVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALSGSQTDWQVSNSFEVEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVVFETLLDAHKAGWLHRWEIADVVIEGNDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRSGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPYDEELGVFVQHDGFLDKGIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYQRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPGAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLDGSHAAALEK"
     gene            complement(4905..5933)
                     /locus_tag="ACJJDL_001796"
     CDS             complement(4905..5933)
                     /locus_tag="ACJJDL_001796"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HGG7574465.1"
                     /translation="MSDTPATPATPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGG
                     IVQEFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRV
                     EANEGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDE
                     DNRLTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVS
                     DDLEVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIY
                     SDRNGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTREATI
                     AYGIESLS"
     gene            complement(5937..7292)
                     /locus_tag="ACJJDL_001797"
     CDS             complement(5937..7292)
                     /locus_tag="ACJJDL_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HGG7574466.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLFYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMMGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
BASE COUNT         1612 a         2109 c         2059 g         1566 t
ORIGIN      
        1 ttaatccact ataccgtttc agacgatctc tcaaacaagg acaacaccat gcaaaccgat
       61 tgcgacgtat tgattgccgg aaacgggctg gcggcactga cgctcgccct gtcgctgcct
      121 gaatcgttcc gcatcgtcat tttgtgcaaa aaccggctgg acgacactgc cagccgtcat
      181 gcgcaaggcg ggattgcggc ggcgtggtcg ggagaggacg acatcgaaaa acacgttgcc
      241 gataccttgg aggcgggcgc gggtttgtgc gacgaagccg ccgtccgcac catcctgtcg
      301 cagggcaaac tggcaatcga atggctgctg gcgcagggcg tggcgttcga ccaaaataat
      361 aacggcctgc acctgacgcg cgaaggcggg cacacctgcc gccgaatcgc ccacgtcgcc
      421 gactacacgg gcgaagccgt catgcagagc ctgactgtcc aaatacgctg ccgcccgaac
      481 atccgcgttt gcgagcagca gatggcgttg gacatccaaa ccgaatcagg tgcggcgtgc
      541 ggactgaccg tcctcgactg ccgaacgcaa gcaacctaca gcatccgcgc ccgccatacc
      601 gtactcgcag gcggcggctt gggacagatt tacgccgcca ccaccacgcc gcccgaatgc
      661 acgggcgacg ccatcgccat ggcgatacgc gcaggctgcg cagtcgaaaa cctcgaattt
      721 atccaattcc accccacagg cttggcaaga tcgtctgaaa acggccgcac cttcctgatt
      781 tccgaagccg tgcgcggcga aggcggcatc ctgaccaacc aagcgggcga acggtttatg
      841 ccgtattacg accgccgcgc cgaactcgcg ccgcgcgaca tcgttgcccg cgccatcgcc
      901 gccgaaatcg ccaaacaaac gcaagacttc gtctcactcg atatcagcca tcaacccgca
      961 gcgttcgtcc gccggcattt cccgtccatc catcggcact gtttatccca atgcggcctg
     1021 gatatcacgc gccaagccat ccccgtccgc cccgtgcaac actacacctg cggcggcatc
     1081 caaaccgacc cctgcggcag aacttccctg ccgcagctct actccttagg cgaaaccgcc
     1141 tgcaccggct tgcacggagc caaccgcctt gccagcaact ccctgctcga atgtgtcgtt
     1201 accgccagac ttgccgccca aaccatcgca gacggacaag cattccaagc caaaacgtct
     1261 ccaaggccgt ctgaaagcct ctcctccgaa gcaggcatct tttcagacgg catccaaagc
     1321 gcattcagcc gccccgtcct gcaagcgttc aaccaacgcc atctgggcat cctccgcaac
     1381 gataccggtc tgcgctgcgc catcgcccag ctgcggcttt ggaaacaaaa ccaaaccgaa
     1441 ccgcacaccg cgtccgaata cgaaaaccgc aacctgctcg aatgcagcct cgccgtcgcc
     1501 caagccgcat acaggcggag acagaacatc ggcgcgcatt ttaatagtga ttgttaaggt
     1561 tggctggtta gaaaaaaaat cgttcaaata aatttgaata gcatggttaa gaaattggca
     1621 tttagttttt agggttgcgt aagttgggtt atcaatctgt tctaaaagca gaaaggccgt
     1681 ctgaaacact gttcagacgg ccttttactt ccttgacact ttatctgacg cgttttacct
     1741 gcccgactgt gcccacacgt tttgcaggta ggcgtaggtc agctcggcgg tatcggacac
     1801 cagcgcgatg tcgctgccca agtcttcggc tttgcccacg ccgataggca aggcgccggc
     1861 ggctttgatg gcggcgacac ctgcggcagc gtcttcaatg ccgatgcagc ggcggatgtc
     1921 cgcgcccacg ccctcggcgg cggcgaggaa gatgtcgggg gcgggtttgg aatgcgcgac
     1981 ggcggcaggg tcggcgacgg tgtcgaagaa gtgggtcagc cccatgcgtt cgagcaggaa
     2041 ggggccgttt ttactggcgg acgcaagggc gatttttttg ccgtttgctt ttaatgcttc
     2101 cagcagcggc aaaatgccaa gatacacgtc ttcgggtttg actgcctgta tcatctccaa
     2161 gtagttgtcg tttttgcggc gggtcagttc ggcgaactcg gcttcgccga cggttttacc
     2221 gccgtgcgcg aggatgcgtt tgagcgaatc gtcgcgcgac acgcctttga gctgctcgtt
     2281 aaacttgcgg tcgatgccga tgcccagttc ttcggcgagt tttttccacg cgcggtagtg
     2341 gtattcggcg gtgtcggtga tgacaccgtc gagatcgaag aggactgcgg taaacgtcat
     2401 tttgcaccct ccttattttt ccaacgcggc ggcgtggctg ccgtcgagcg tgatgtcttt
     2461 gccatacacc tgcaaatcga gcggctcgcc tttgagcagg gtgaagacga cgttttcttt
     2521 gccgacggcg actttaatca gacggcctcg gtagttgata tggaaggcgt agcctgtcca
     2581 tgcgcccggc aggaacggtg cgaagctgag tttaccgccc caagttttca tttgggcgaa
     2641 accttggacg atggcgagcc acgagccggt catagaagta atgtgcaggc cgtcttcggt
     2701 gtcgttgttg tagttgtcca agtccaggcg ggcggtgcgc tggtacattt ccacggcttt
     2761 ttcttctttg cccagttcgg cggcgagaat agagtggata caaggcgaca acgagctttc
     2821 atgcacggtc atcggttcgt agaagtcgaa gttgcggcgt ttttcgtcga tattgaaacg
     2881 gtcgccgaag aaatagatgc cttgcaatac gtccgcctgt ttgataaagg gcgaacgcag
     2941 gattttgtcc cacgaccatt tctggttgag cggcaaatcg tcgggcgaaa gcgcggacac
     3001 ggggcggatg cctttgtcga ggaagccgtc gtgttgcacg aatacgccga gttcttcgtc
     3061 atacggacgg tacatattcg cgctgatgtc cgcccatttt tccaactcgg cggcgctcac
     3121 gttcaaatcc ggacgcgggt atttcgccag ggcttcgcgg gtgtagtcca atacccatgc
     3181 ggcgagggtg ttggtgtacc agttgttgtt gatgttgttt tcgtattcgt tcgggccggt
     3241 tacgccgtga atcatgtatt tgccgctgcg tttggagaag tggacgcggt ccgcccagaa
     3301 gcgggacact tcgaccaaga cttccaagcc ttctttggca agatagccct cgtcgccggt
     3361 gtagttggtg tagttgtaga tggcgtaagg aatcgcgccg ttgcggtgga tttcctcgaa
     3421 ggtgatttcc cattcgttgt ggcactcgat gcccgtaaac gttaccatcg gatagagtgc
     3481 gcccgccaag ccctgttcgc gcgcgttgtg ttgcgcctgt ggcagttggt tgcggcggta
     3541 ttgcagcagg ttgcgggtaa cttcgggttc cgccagtgcg aggtagagcg gcacggcgta
     3601 ggcttcggtg tcccaatagg tcgcgccgcc gtatttttct ccggtaaagc ctttcgggcc
     3661 gatgttcaga cgcgcgtctt cgccgtagta ggtggagaac agttggaaca gattgaaacg
     3721 gatgccttgc tgcgcttcgt cgttgccttc gatgaccacg tcggcgattt cccaacggtg
     3781 cagccagcct gctttgtgcg cgtccagcaa ggtttcaaac acaacgcctg cgactttttc
     3841 cgacaaggcg cggcctgcgg ctttcactgc ttccaagccc tgataatcgc ggctggtggt
     3901 aacaataacc cgtttttcaa aggttttggg cgtgccgccg acttcgacct cgaaagaatt
     3961 ggagacttgc cagtcggttt ggctgccgct gagggctttg aagctgccgg cgaaagtttg
     4021 ctcggcgttg acgataaatt gttccacgcc gaaagggttg gcaacggttt gggcggcaat
     4081 gtaggagaga ctgtctgaaa cgcctttgtc caatacctgc cagaattttt cttcgtagtt
     4141 ggagtcttcg tttttcacgt cggcatcgat gatggaatcg atgcggactt ggtgggtttt
     4201 gccgtcaacg gatacggctt cccagcggat aaccgccagc tctttttgcg cgacggacag
     4261 gaatttgcac acattgaaac gcacaccgaa tacggtgaac gagcggcgca acacgccgtg
     4321 ctgcatatcg agttcgacgg agaagccggc aacatcgttt ttcgccaagt ccacctcttg
     4381 tccgtcgaca aagattttga ctttgctgaa attgagcgcg ttgatggctt taccgaaata
     4441 tttggggtag ccgtttttcc accagccgac gcgggttttg tcgggaaacc acacaccggc
     4501 gatgtaggtg cccaagtggc tgtcggcgga gtaggtttcc tcaaagctgc cgcgcatacc
     4561 catatagccg ttgcccaaac tggtcaggct ctcttgcagc cgtttgtgtt ctttttccag
     4621 ctttgccgaa cgcagcgtcc aagggctgat ttccataatt cttgtgtaca tttatgaagc
     4681 tcctgtttgg attgatttga gggaatggtg aaatcttata gtggattaac aaaaatcagg
     4741 acaaggcgac gaagccgcaa acagtacaaa tagtacggaa ccgattcact tggtgcttca
     4801 gcaccttaga gaatcgttct ctttgagcta agccgaggca acgccgtacc ggtttttgtt
     4861 aatccactat aaaaaggccg tctgcaaccg gtgttaggaa gctcctaaga aagggattcg
     4921 atgccgtaag caatcgtcgc ctccctggta tcacccttgt tcagacgaat attgccgaac
     4981 tcgggccaat tcaggctgtc gggcagcgtc tgcgcctcgg tcgccagcgc gtcgtaaacg
     5041 cccgcatcgt gccgcgcgaa atcctgcggg gcggcggtaa agatgaccaa gccgttgcgg
     5101 tcgctgtata tgctgatacg acggcggcgt ccggcttgca acacagcggc gggacggcct
     5161 atatcggacg gcacgcggta agcgtcgtca aaaccggccc gacccgtttc gcggcgcagg
     5221 gcggcaacgg cggcatccag cggcttgggc cggctgaaat caaatacttc gaggtcgtct
     5281 gaaaccgttg agacgggcag tttttcggca tcggccggaa tatgtccgcc ctgcggaata
     5341 tgcagaaccg catcgtgcag gcccgcgtcc agccgccagt aaatgtgcag cgtcgggtcg
     5401 aacaccgtgt cgccgagcgc ggtggcgcga tagctaacgg taagccggtt gtcctcgtcc
     5461 aagcggtagg aaatatccaa atccaaatcg ttgggataac cgtcggccga ctgttgcagg
     5521 cggctgcgca gcaccaccga acggccgtct gccgccaccg cgttgaaacg ggtaacggcc
     5581 agcccgtgcg aaccgccgtg cagcgcgttc ctgccttcgt tggcctccac gcggtaagtc
     5641 ctgccgttga tgtcgaacgc cgcaccgcgg atgcgtccgg ccacgcgccc tatctgcttg
     5701 ttaatctgaa acggattgtc cgcataggaa gccgcatcgt cgaacgacac cacgaggttt
     5761 tcgcgcacgc cgtctgccaa aacggaaaat tcctgcacaa tcccgcccaa gtccagcacg
     5821 cagacacgcg taccacgccg attggacagc acatagccgg ttacggcacg cccgtcgatc
     5881 aggccgaaat cgcgggtagc gggggtagcg ggggtagcgg gggtatcgct catcgctcaa
     5941 accccgccgt gtgtttcttt aatcaggaac acggaaaacg cgcccagcag caggacgacg
     6001 ccccctacca agaacatagt ggcctgcaag ccgcccatca tcgggaaaag cacgaaactc
     6061 aacagcgaag cgacgatttg cggcatacag atagagccgt taaacaggcc caagtaagtg
     6121 cccatatgct tgcccgacaa ggcgttggtc acaatcgtca gcggataagt gataatgccc
     6181 gcccaagcga tgccgattaa ggtataagac aacaccagcg cgtattggtt gccgatgaag
     6241 aaaacggaga aaaagccgag cgcgcccaaa gccaaacagc cgaaataacc cgccttatgg
     6301 tatttattcg gcactttcgc caatacaaac gaacaaatca ccgccgcaac cgactgcacc
     6361 gccgccaaaa cgccgtacca gttgcccgcc tcctgataac ctacggaaga cgcatcagtg
     6421 gtgtgccaga cgttttccgc aatcgcgcct gccgagtaag tccacatata ttggaaggcg
     6481 aaccagcaga aaaactgtac cagagtaacc gtccaaaacg ctttaggtgc cgtttttaaa
     6541 agttcgaacc agttggcttt ttcctgattc gcggcgacat cgatgccgtg gtaacgggca
     6601 taggtttccg ggtcgtattc tttgactttg aagattgtga acgcactggt aataatcagt
     6661 aatgccgcgc ccacatagaa tgctacgacc acggtttgtg gcacaacgcc tttctcggcg
     6721 gtgttcgcca aaccgatata cgcgaacaca aacggcagaa tcgccgccac gaccgcgccc
     6781 gtattcgcta agaaactttg aatcccgtag gcgtagcttt tctgctcctc gttgaccata
     6841 tcgccgacca tcatcttaaa cggctgcatc gccatattcg acgacacgtc caacagcgca
     6901 atcatcagcg cgccgaacga caaagccgcc agcgacgcat agccgaaacc gaagctgccc
     6961 gagttcggca tcaaaatcat cacaataacc gcaatcagcg tgccataaaa cagatacggc
     7021 agacggcggc cgcctaaacg cggcttccaa gtgcggtcgg agtaatggcc gacaatcggc
     7081 tgcaccagca tccccgccag cggcggcagg atgaaaaacc agcccaaatt gtgcgggtct
     7141 gcgcctagcg tttgaaaaat gcggctcatt tgcgagcttt gcagggtaaa ggccgtctga
     7201 acgccgagaa agccgaaact gagcatccaa atcgtgcttt ttgccagcgc gggcaaacct
     7261 tgttttgctg tttgaggcgt atattccgac ataaggtaaa tccttttttg atttgaaaag
     7321 tatagtggat taacaaaaac cagtac
//
LOCUS       DBBZYD010000102         7277 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.102, whole genome shotgun sequence.
ACCESSION   DBBZYD010000102 DBBZYD010000000
VERSION     DBBZYD010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7277
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.102"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(108..2711)
                     /gene="pepN"
                     /locus_tag="ACJJDL_001798"
     CDS             complement(108..2711)
                     /gene="pepN"
                     /locus_tag="ACJJDL_001798"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HGG7574467.1"
                     /translation="MSKIVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLSVKINGAAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASAGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEYSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNSFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLT
                     EAEQIFLLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2847..3641)
                     /locus_tag="ACJJDL_001799"
     CDS             complement(2847..3641)
                     /locus_tag="ACJJDL_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HGG7574468.1"
                     /translation="MTTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLLHGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            complement(3757..3891)
                     /locus_tag="ACJJDL_001800"
     CDS             complement(3757..3891)
                     /locus_tag="ACJJDL_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574469.1"
                     /translation="MPSERIFRSVLRLVGVSSETVKQKFAGVELSYAGKAAGESLYCL
                     "
     gene            complement(4391..5259)
                     /locus_tag="ACJJDL_001801"
                     /pseudo
     CDS             complement(4391..5259)
                     /locus_tag="ACJJDL_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
     gene            complement(5310..5846)
                     /gene="ruvC"
                     /locus_tag="ACJJDL_001802"
     CDS             complement(5310..5846)
                     /gene="ruvC"
                     /locus_tag="ACJJDL_001802"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HGG7574470.1"
                     /translation="MSATVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(5849..6088)
                     /locus_tag="ACJJDL_001803"
     CDS             complement(5849..6088)
                     /locus_tag="ACJJDL_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HGG7574471.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6118..7128)
                     /gene="dusB"
                     /locus_tag="ACJJDL_001804"
     CDS             complement(6118..7128)
                     /gene="dusB"
                     /locus_tag="ACJJDL_001804"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HGG7574472.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTS
                     DPTLRNTKKTLHRSDFTDEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVKAAGVPVTLKTRLGWHDDHKNLPAVARIAED
                     CGIAALAVHGRTRTQMYKGEAAYDLIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECTATILNHIRAMHAFYGDTAGV
                     RIARKHIGWYIDEMPDGEQARRDINCLDSAAAQYDMLAGYLERLAEKTDSWACAYRPN
                     TF"
BASE COUNT         1630 a         1929 c         1902 g         1816 t
ORIGIN      
        1 atatgacttt gcggccgttt tgccattgcg taataaaacg atggggaagt gatgataaaa
       61 cgtgtgtgta actatatcag acggcattgt ttttctgttt gacggcctca atccaaaatt
      121 ttgccgacga tttcgcccac gtctttcgac aatccttcct gcgcccgaat gcgctgcaat
      181 gcttgtttca ccaagttttt gcggtgcggc tcgagcttgt tgcagaggtt gaacgcctgc
      241 accaaacggg cggcgacctg cgggttgaag cggtcgattt cgatgacttt gtcggcgatg
      301 aagcggtagc cgctgccgtc ttctgcgtgg aaatgcggga cgttgcggct gaagctgccg
      361 atgagcgaac gggctttgtt ggggttttcg aggctgaatt tcggatgctg caaggcggtt
      421 tgaacctgct gcagggtgtc gctgcggcgg cttgagccga taagggcgaa atatttgtcc
      481 atcaccagcg cgtcgtctga aaacttgtcg gcaaactgcg ccagcaggcg gttgcgcgta
      541 tcgctttcgt tgccgttgac ggcggacagg atgccccatt cgtgggtcat gttttgcgcc
      601 atttcgccgt atttttcggc aacggtttcg atgtgcgcgg ggtcggcgcg caggacgaag
      661 gcgcggcaga cgttgcgcag cgtgcgccag ccggcagctt cggggctgta ctcgtagctt
      721 tggttttcct gcttcgccgc ctgacggttc aattcgtgcc atttcggcag gaagcggacg
      781 gcaagcgtgt ccaacaaggc ttcgcgcgcc tgatggtagc gcagcgggtc gatgttttcc
      841 gcgccgtccc acagctcggc ttcagacggc acgcccaaaa gcagggcttt gaaggcgttg
      901 tctaagaggt cgtctgaaat gactttttcg acggcggcaa gcagtttttc gtgtttcggc
      961 agttcaatac cgtctgaaag tgcggcaagg ttggcggcga cggcacggcg gtagagcgtt
     1021 tgtgcggctt cccagcgcgt gaaggcgtcg ctgtcatggg cgagcagaag cagcaggtcg
     1081 tcgtcgctgt acggatagtt cagatgcacc ggcgcgctga acccgcgcag cagcgaggga
     1141 acgacggctt cggttacgcc ttcgagcagg aagatctgtt cggcttcggt cagcagcaat
     1201 acggcttcgg tcgcgcgttt gccctgataa tcgaatgcca ccgcttcgcc gttgcggttc
     1261 agcagcccga ctttgacggg aatcatcatc ggctgcttgt ccgccatatc gggcgtgggc
     1321 ggcacggttt gtttgatggt taactcgaaa ctattgtttt tcagacgacc ttccgcttcc
     1381 aagacgggcg tacccgcctg gctgtaccac aaggcgaact ggtcgagatt gatgccgttc
     1441 gcgtccgcca tcgccgcgcg gaaatcgtcg caggtcacgg cctgcccgtc gtgtcgttgg
     1501 aaatagagct tcatgccttt ttggaagccc tcttcgccga gcaaggtgtg atacatccgc
     1561 accacttccg cgcctttttc ataaacggtc atggtgtaga aattgttcat ctcctcatag
     1621 ctggcggggc gcaccggatg ggcggtcggg cctgcgtctt cggggaactg gtgctggcgc
     1681 agcaggcgga tgttctcgat gcggcgcacg gcgcggctgg cgcggtcgcc ggaaaattct
     1741 tggtcgcgga acacggtcaa cccttctttc agcgaaagct ggaaccaatc gcggcaggta
     1801 acgcggttgc ctgtccagtt gtggaaatac tcgtgtccga ccacggattc gatgccttca
     1861 aaatcggtat cggtggcggt acggctgtcg gcaaggacga acttggtatt aaaaatgttc
     1921 agccccttgt tttccatcgc gcccatattg aaatcgccca cggcgacgac catgaaaata
     1981 tccaagtcgt attccaaacc gaagcgcgtt tcgtcccact tcattgcgtt tttcagcgat
     2041 tccacggcaa agccgacctt gggcttgtcc gcttcggtgg tgtaaaactc gattttgacg
     2101 tttctgccgc tcatggtggt gaaatagtct tccgtgaccg ccaaatcgcc cgcgaccaaa
     2161 gcaaacagat aactcggttt ggcaaacggg tcttcccatt tcacccaatg gcggccgtct
     2221 gaatactcgc cgccgtcgat tttgttgccg ttggagagca aaacgggata gcgttttttg
     2281 tccgcgacga tggtggtcgt gaacttggac atgacatccg gacggtcgat atagaacgtg
     2341 attttgcgga agccctccgg ctcgcactgg gtaaacaggt taccggcgga cgcatacagc
     2401 cccatcagcg atttgttttc cgccggcagg atttcggttt ccacttcgac ggtgaagcgt
     2461 tcggacggca cgtctgcaat cgtcagcgtc tcaccttcca acacataatc cgccgccgcc
     2521 ccgttgattt tgacggacaa gagtttcgcc gaaccgtcca acaccagcgg ctcccctacc
     2581 ctctgcggct caaccgtcaa acgcgacttc acgacggttt gcggttcggc aatatcaaaa
     2641 tgcaggtcgg tttcaaggat gcggtaggca ggcgtttggt aatctttcag ataacggacg
     2701 attttgctca tttttttctt tcaatattgt ttggtttgac tggaaaaggc ttcagacggc
     2761 ataggcaaac cctgcaccga tatgccgtat gaaaccgaaa catcagtgcg gacgcaccgt
     2821 caaacaaccg gttttaattt caatctttat ttccacgctt ggacaaattc tgcccaatgc
     2881 ggtttgtctt ctgtttgggc ggaaagatag tttctgatcc gcttgatttc catttcgtat
     2941 tcgtccgcgt cgaatctgcc gctgaccaga cagaaacgca gatacatcaa atacgtattc
     3001 acggcatcgg tttcacaata attgcggatt tccttcagcc tgcccgcgtg gaacgcatcc
     3061 cacaccttgc tgccgtccat acccagcttg cctggaaaac cgcacagttt cgccatatcg
     3121 tccagcggca cgtttgccct cggctggtaa agcgcgagca aatccatcaa atcgcaatga
     3181 cgttggtggt agcggctgat gtagttgttc cacttgaaat cgcggctgtc gccgaaatcg
     3241 ccgtcaccca tatcccaata gcgcgcggcg ttgatgccgt gtagcagcga acggtaatgc
     3301 agaaccggca ggtcgaaacc gccgccgttc caactgacca gttgcggcgt atgtttttca
     3361 atcaactcga aaaatttggc aatcacgact tcttcgccat cgtccatctc gccgattgta
     3421 ccgacatgga ctttatcctg cccccaacgc atgcagcacg aaatcgccac aatctgatga
     3481 agatgatgct gcataaaatc cccacccgtc tgagcacggc gtttttgctg ggcaaacagc
     3541 accacttcat cgtcgggcag cgaggacggc agctcgtaca atgttcggat accctgcaca
     3601 tcgggtacgg tttcaatatc gaaagccaaa atcgtggtca tgacagcacc ttgtatttaa
     3661 aacagacttg cgcctattgt gtcattaaaa ggcggataaa aaaagaggca accccccaca
     3721 ggattgcccc aatacctcaa atcagagatt tacgcttcac aaacaataca ggctttcgcc
     3781 tgcggctttg cccgcgtagc tcaactctac gccggcaaac ttttgtttca ccgtttccga
     3841 tgaaaccccg accaatcgca agactgaccg gaaaatcctt tcagacggca tttcctgcct
     3901 gtcgtgtaat tccatgtagc gaaatgtacg ccattttcta cgctttgcca agcatttttt
     3961 acaatataaa tgtcaaaaca ttaattttat aaaattgctg aaaatattaa atatatggat
     4021 ttttattttt tatatttcaa taaatataaa tttaattttg atttatattt aaatttaagc
     4081 ataaaatgtc aaatattaaa ggaaacatga aaggcatata ttaaatattt atttataacg
     4141 ctatgttttt aaagaaaatt aattttaata tattaactag attgtctgca tatattcata
     4201 ggtttgcggt atttcttcca aaacctgctt cgaatttccc gaccaagtct taaaaatatt
     4261 gttttttgag atacttaaat agcagcgatt atcaaatgaa atctgttcat ataatctgcc
     4321 attttgcatt taaaaaaaca atcaggagtt tcgactcgaa acgcctgata tgttttgtaa
     4381 ttttacgtag tcagtaaaaa tcggggctgc cttccggacg ggttttaaaa cgcttgtgca
     4441 gccaaaaata ttgttccgga tgttcgcgca ccctgtcttc gataaaacgg ttcatgcgct
     4501 gcgcgtcggc tttcgcgtct tcacccggaa aggattccca agcagggtag aaatgcaatg
     4561 taaccgtatt gtccgcctcc ctgatgggga tggcgggtat cacttttgca tttgcaagcg
     4621 cggcaatgcg gctcaagccg gtaatcgttg ccgtctgaat accgaaaaaa tccacaaaaa
     4681 ccgaatcgtt gcgtccgaaa tcctgatcgg gcagatacag aaacggcgcg ctgcttttgc
     4741 ggaactgttt gacgagggcg cgcagccctt cggtgcgccc gataaggaag acgttgtgat
     4801 agcggttgcg gcctttcaaa atctgttcgt ccaatatctt gtttttttga tgggaataca
     4861 tactgatcag cgggatatcc tgattaagcg cgtacaccgc catctcgaac gcggtgaagt
     4921 gcggatacag gatgatgact ttttccccgc cgccagcgcg tcgtccaaat aatgcttatt
     4981 gcggtagcgc accagcgatt tcaaacgtcc ggcaggcgcg taccaatata aaccgtattc
     5041 caacatcagt ttcgccatgt gtttgaaatg ctgtttcaac acggttttac gcttttcctc
     5101 actccattcg gaaaaacatt ttgccaaatt gatttcgccg atacggcggc gcggtttgac
     5161 cagaaggtag gcaagcaaac ccgtcaggtc ggcaatcttg tgcagcagcg caaacggcag
     5221 aaactgcaaa acatacagta caaaaaatat aaatttcatc tcgatacaca ttttcttttc
     5281 agacggcaaa atacaaatgc cgtctgaaac tattgaaacc tgccgcgctt gacctgcatc
     5341 cccgaaggat tgagtttggc ggcaagcccg tggttgcgta aggcgtgggt cagcgcgacg
     5401 gcaagaccgt ccgccgcatc cgcctgcggc gttcccgaaa gccccagcat ctgcaccacc
     5461 atatgctgca cctgttcttt cgccgccttg cctttgccga ctaccgcctg tttgacctgc
     5521 aaggccgtgt attccgaaac gggcagctta tggctgacca atgccgccaa tgccgcgccc
     5581 ctagcctgac ccagcatcag cgtcgatgca ggattgacgt tgacgaacac ctgttccacc
     5641 gccgcctgct gcggcttgta aacggcaacg acttcgccga tgtgccggac gattacggca
     5701 atcctgtctg ccagaggcgc atcggcaggc gttttgatgc agcctgaggc aacgtaaaaa
     5761 tgatcgcgcc ccctgacatc gatgacaccg aaacccgtta cgcggctgcc cgggtcgatg
     5821 cccaagatac ggacggttgc cgacatattc acagcaaacc gtgttgaatc agttttttac
     5881 gcaaggtatt gcggttcagt cccaacatga cggaggcttt ggactgatta ccgccgcatt
     5941 gctccatcac acacaccagc agcggctttt ccacctgatg caataccata tcgtacacgc
     6001 cgcaaggttc ggtaccgttc aggtctttga aatattgttc taaattttgt ctgatgcatt
     6061 gagaaatatc gggaagggta tggggcatga ttgcactttc aaaggataat caagtgttca
     6121 gaaggtattc gggcggtagg cgcacgccca actgtcggtt ttttcagcaa gtctttcaag
     6181 ataacctgca agcatgtcgt attgcgccgc cgcactgtcc aagcagttga tgtcgcggcg
     6241 cgcctgttca ccgtcaggca tttcgtcgat gtaccagcct atgtgtttgc gtgcgatgcg
     6301 cacaccggcg gtgtcgccgt aaaacgcgtg catggcgcgg atgtggttca aaatagtagc
     6361 ggtgcattct gccaaactca aagcaggcgg taaaacaccg tgttcggcat aatgtttcaa
     6421 atcgcggaag aaccacggtc tcccttgcgc gccgcgccct atcatgatgc cgtctgcggc
     6481 ggtttgtttg aggacagctt gggctttttg cggcgaagta atgtcgccgt tgacccaaac
     6541 tgggatgttc agacggcatt tggtttcggc aatcaggtcg taagccgctt cgcctttgta
     6601 catttgcgtg cgagtgcgtc cgtggacggc aagggcggca atgccgcaat cttcggcgat
     6661 gcgggcgacg gcaggcaggt ttttgtggtc gtcgtgccag cccaaacggg ttttgagggt
     6721 aacgggtacg cccgccgcct tgactaccgc ttccaaaatg gcggcaacca gcggctcgtt
     6781 ctgcatcagc gcgctaccgg cttggacatt gcagactttt ttagcgggac agcccatgtt
     6841 gatgtcgata acctgcgccc caaggctgac gttgtaacgc gcggcatccg ccatctgctg
     6901 cggatcactg ccggcaatct gcacggcaac gatgccgcct tcatcggtaa aatcactgcg
     6961 gtgcagggtc tttttggtat ttctaagcgt cgggtcgctg gtcagcattt cgcacaccgc
     7021 ccaacctgcg ccaaaatctc ggcaaagtcg gcggaacggt ttgtcggtaa tgcccgccat
     7081 cggcgcaagt gcgatggggt tgtcgataaa atagccgccg atgtgcataa tgggcccgcg
     7141 tttcaaaaaa gtacgccatt gtacattttt taagcaggat ttccaatctc cggacgcgcc
     7201 cgcgattggg gcaggcaccg ttttatggca taatccgcac acagattccc tgccccgcca
     7261 ctcacaggag ggcagtt
//
LOCUS       DBBZYD010000103         7140 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.103, whole genome shotgun sequence.
ACCESSION   DBBZYD010000103 DBBZYD010000000
VERSION     DBBZYD010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7140
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.103"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="ACJJDL_001805"
     CDS             complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="ACJJDL_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HGG7574473.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAALNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="ACJJDL_001806"
     CDS             complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="ACJJDL_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HGG7574474.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="ACJJDL_001807"
     CDS             complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="ACJJDL_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HGG7574475.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAEQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPVVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIASITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
     gene            6372..7004
                     /gene="mtrR"
                     /locus_tag="ACJJDL_001808"
     CDS             6372..7004
                     /gene="mtrR"
                     /locus_tag="ACJJDL_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HGG7574476.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT         1674 a         1991 c         1863 g         1612 t
ORIGIN      
        1 aaagaaatgc cgtctgaaac cttatcgttt cagacggcat tttattgccc gaccggttat
       61 ttgtcggttt gggtatcccg tttcaatccg ccgccgagtg ccttgtacaa atcggcaagg
      121 ttttcggcgc gggtcagttg tgccgacaaa gccgcaccct ccgccgcata gctgctgcgt
      181 tccgcatcga gcaaatcgag cgcgccggat acgccgtgct tgtaacgcag gccgaccaag
      241 cgcaacgctt ctttagaggc gcggctttgt ttgcttaaag cgtcataggc tttatccagc
      301 tgctcgcgcg ccgccaatgc gtttgccacg tcttgaaatg cggattggac ggcggattca
      361 taggcaacga tttgtgcctg ttggcgcagc ttggctacat caaggttcgc cttgttcgta
      421 ccccaggtaa aaatcggcag ggtaatagac ggcgcgaacg accaaacgcc cgtgccgctt
      481 ttgaacaacc cacccaattc ggcagaaccc gtaccgacgg ttccggtcag gcggatggat
      541 gggaaaaagg cggcgcgtgc cgcaccgata ttggcgtttg cctgtttgag cgcgtgttcg
      601 gcagcacgga tatcgggacg gtcgagcaat acttcggaac tcaaaccggc cggcagtttt
      661 tcaacaaaaa actgcttgtc cagcggcaaa ccggcaggca ggtcttcggg tatcggttgg
      721 ttaatcaagg ttgccaaggc attgcgcgcc tgttcgcggc tgcgcgcggc atgggcataa
      781 tcggctttgg cagattcgat cagggcttcc tgctgacgta gggcgacggc ggaaatcacg
      841 cctgccttgt aacgtaattc ggacagcttg taggtttcct cgcgcgtttt caaaacacgt
      901 tgcgccaaag acatcgcttc ttcggcgtaa cgttcgttga aataggcttt ggcaacggtg
      961 gcaatcaggc tcaaatgtgc cgcatcgcgg ttggcggtgc tggcgaaata gccttgcagt
     1021 gccgcctcgc tgctgctgcg tacacgcccg aacagatcga gttcgtaaga tgccgcaccc
     1081 agtccgactt tgtagctgct gcttacattg ccgccgctca agctgccttg gcgcgagtcg
     1141 ttcgcattgg cggcaagcgt gggcaggagg ttgttgcgct caatcatgta ttgtttgcgg
     1201 tagatttcgc tgttcaatgc ggcggtacgc aaactggtat tgcgctcgag tgcgatgtcg
     1261 atcagctttt gcaggcgcgg gtcggcaaaa tagtcatgcc aacctaaatc gaccgcacgg
     1321 atgccgctgt cggcggtatc gtttttgaac gtttcggcaa cttcgacttt gggctgctcg
     1381 tattggggaa tcatggtgca ggcggataat gcgaaggctg ctgcaacaga agtcaaggtg
     1441 gttttcaatg tagtatccat aaaaaagtcc tgatgccgtc tgaaaacccg tgggcgttca
     1501 gacggcatgg ttgcttaatg ttggctgtcg tccgaaccgg tgatgcccgc ttcggcggcg
     1561 tgttttactg ccatttcgtg ttcgtgcgcg gtttctttga agaatttgcg caccaccaca
     1621 tagaaaagcg gaacaaggaa cacggacaag agcgtgccga tgagcatccc ccagaatacg
     1681 gtcgtgccga tggcgcgctg gctggcagaa cttgcaccac cggcaatata caggggaacc
     1741 acgcccaaaa taaaggcgaa cgaggtcatg ataatcggac ggaaacgcag gcgggcggct
     1801 tccaaagcgg cttcgaccgc gcttttccct tgcgcttgaa ggtctttggc aaactcgata
     1861 atcaaaatcg cgtttttcgc actcaaaccc atcacggtaa cgaaaccgac ttgaaagtag
     1921 atgtcgttgg cgaacgaggg aacgctgccc aacagtcctt caaacaggtt gcgcccggtt
     1981 acgcccgcag ccgcaccgat caaacccaac ggaatcacaa ggatgaccgc cagcggaatc
     2041 gaccagcttt cataaagcgc ggcaagtacc aaaaatacgg ctgcaaccgc caaaccgtac
     2101 aaaatcaggg tttgcgagcc gccttttgcc tcttcgcgcg actgtccgcc ccattcgaag
     2161 ctgtaaccgc cgcccaattc gtcaaccatt ttttgaaccg ccgccatagc ctgcccggtg
     2221 gaaacgccgg ttgcaggcga agcggacagc ttcatcgaag gataaccgtt gaagcgtacg
     2281 ctctgttccg taccgttttc ccaagaaaca gtagcaatgg tggaaagcgg tacggcgacg
     2341 ccggatttgt tcggcacggt caggttcaaa atatcggcag gctgcatacg ggcatcctcg
     2401 tcggcctgca ccatcacgcg ttgcagacgg ccttggttcg ggaagtcgct gacataagac
     2461 gaactcagcg cacttgccaa tgcggtgcgg atgtcggcaa acgaaatgcc ttgcgccgcc
     2521 gcggcggcac ggttgatgtc gattttcaac tgcggcgagt cttccaaacc gccagcacgg
     2581 acggtgctgg ggtcaaacaa accgctggca cgcattttct gaatcaactc gttgcgcttc
     2641 gccagcaatg cggtatggcc ggtattattg cggtcttgca ggttgatgct caggcccgaa
     2701 ccattgccca actccagaat cggaggcggg acgacggcga tgccaaaacc gtctttaagc
     2761 gtccccatca tcatacccgt cagcttgccg gcaatcgcaa cggcatcgct gccgggcgcg
     2821 gtacgctcgt tccaatcttt caatatggca aaacccatcg ccatattctg accgctgccc
     2881 gaaaagctga agccggaaac ggtaatgatg ttttctattt caggaatgct tttcgccagt
     2941 tgggtaactt gcgccaaagt cgcattggtg cgctcttggg tcgctcctgc aggcagttgc
     3001 acgctgacca tgacgaagcc ttggtcttcg gtcggcagga atgaagtcgg caggcgcata
     3061 aacaggaaca cgcccacaac cgccaagccg atatagacaa ccatcatgcg gaaagtctta
     3121 cgcagcactt tggcaacccg gccttcgtaa ccgtgcgtcc aactgttgaa tttcttgtta
     3181 aaccagccga agaaaccttt tttctcttcg tgatgccctt tcgggattgt cttcaacatt
     3241 gtggcacaca aagcaggggt aagggtcagc gcaaggaagg cggagaatgc gattgatgac
     3301 gccatcgtca gggcaaactg tttgtaaata ttgcccgtcg ccccgctgaa catcgccaac
     3361 ggtacgaaca cggaaatcag aacggcggta ataccgatga ccgcgcccga aatctgaccc
     3421 atcgcttttt tggtcgcttc tttgggcggc aagccttcac ccgccataat gcgctcgacg
     3481 ttttcaacca ccacaatcgc gtcatcgacc acgatgccga tgaccaaaac catcgcaaac
     3541 atggtcagta cgttaatcga catgcccata taagagatga aggcgaaacc gcccaacagc
     3601 gaaatcggta cgacgatggt cggaatcagc gtataacgga tgttttgcag gaagagatac
     3661 attacgacaa acaccagcac catcgcttcg attaaagtgt gaatcacttt ttcaatcgaa
     3721 atttcgacga atttggaagt atcgtaaggg gttttccagc tcataccctg aggaaagtat
     3781 ttttccaacg tcgccatgcg ttctttaacc gcctttgccg tcgccatcgc attgccgctg
     3841 ttggacagca tcaccgccat accggtggta tttacaccgt tcagacgggt tgaggaagaa
     3901 tagtcttcca tacccagtcc gacccttgcc acatccttca ggtaaacatt agaaccgtcg
     3961 gtattggcgc ggaggatgac gttgccgaat tcttctgccg tacccaactg cccttgcgcc
     4021 gttacggtag ccgtaaccgt ctgtccgcga acggcgggaa gcgaaccgat agaacccgct
     4081 gaaatctgga cgttctgggc ggacagcgcg ctgccgatat cggcaaacga caaattgtag
     4141 ttttgcagtt tcttaggatc aacccaaatc cgcatcgcgc gttgcgcgcc gaacaggcgt
     4201 acctgcccca cgccttcgat acgctgcaac tcgggaacga tattacgctg cgcgtagtcg
     4261 ttcatctctt cggttgactg cacatccgac gaaagcatca caatcatcag gaaattggaa
     4321 cgcgccttgg atacggttac gccgtattgc tggacggttg ccggcagcgt gctcaatact
     4381 tcggaaagct tgttctgcac ttccacctgc gccagattct cgtcggtatc gggcgtaaag
     4441 gtcaggctca cgctgccgct gccgctcgaa tcggcggaag tggacatata atccaaacct
     4501 tccacgccgt tcatattccg ctcgatcacg gaaagcacgc tgtcttccat tacctgcgcg
     4561 gacgcacccg gataagtggc gtgcaaagta atggtcgggg cggcgacaga cggatattgc
     4621 gaaacaggca ggcttttgat gccgaaaata cccgccgcaa taatgaaaat cgaaataacc
     4681 cacgcaaaaa tagggcggtc gataaaaaat ttagccatcg atgccttcct tattccgctt
     4741 cagaagcagt tttggcttca gatgccgtct gaacgccgga ttgaggcgcg gcggcttggt
     4801 tttcagacgg cgcccattct ttgggcgtta cctttttcgc acccgttata ctggcgatac
     4861 tgatgccttc cacaaccacc ttgtccccgt ccttcagacc cgacgtaaca atccaattcg
     4921 taccctgctg ttgcgcaacc gttacctcgc ggggttccat accgccttgg gcattcacaa
     4981 tcatcacggt atctttcgca ccgcgcgtta ccgcctgctg cggcacaaca aatgcgttat
     5041 ccaccgccac ttggtccatc agcacgcgca catacagacc gggcatcagg atattctgat
     5101 cgttcggtac ggcggcgcgc agggtaatct gaccggtcga ttcgttgacg accggatcgg
     5161 caaacagcag gcggcctttt tcagggtaaa ctgtgccgtc gtcaaatttg atgccgaccg
     5221 caatcacacc atccgccgcc agcagtttgc cttcggctat ctgacggcgc aatttcatca
     5281 cttcggatgc agactgggta acgttcacat acatcggatt ggtttggcgg atggttgcca
     5341 gcacggtcgt atcgcccgca ttcaacagcg taccttcgga aactttagac tgaccgataa
     5401 agccggaaat cggcgcggta atgcgcgaac ggttcagatt gatgccggca gatttgatcg
     5461 ccgcctgtgc tgctttgaca cctgcctcgg cagaacgttt cgccgttacc gcagcatcgt
     5521 attcctgccg gctgacggct tcggcggcaa ccaaaggctt gtatcgcgcc aaatccgcat
     5581 ccgctttggc aagcgttgcc tgagccgttg ccagttgcgc gcgcgcgctt tccagacctg
     5641 cttcataagt ggaactgtcg atctgataca gcggctgttc ggcacggaca taactgcctt
     5701 cttggaacag gcgtttttgg atgatgccgc cgacttgggc gcggacatcg gcggtacgca
     5761 gcgattccaa acgccccggc aactcgacgg tcaacgcgac ggtttgcgga tggacggtta
     5821 cgacaccgac gacgggcgca ggggcttccc gaccagcagg ctgcccgccc tgcgccgcgt
     5881 ctccgccttt accgcaagac gacagtacca atgcaacggc ggcagccaac gcggccgcac
     5941 gcatcgcctt aaaagcataa aaagccatta tttatcctat ctgtctggtt tgatgtaaag
     6001 ggttttgcca atcaacaggc attcttatag tggattaaca aaaaccagta cggcgttgcc
     6061 tcgccttagc tcaaagagaa cgattctcta aggtgctgaa gcactaagtg aatcggttcc
     6121 gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
     6181 tttcaggata taaaaaccgc ctgctttgat acccgaatgt tcgaacgggt tgcaaagcag
     6241 gttatgcctg ttttcaaagt tgagatgtag tctcaatttc atgggtttca ttatacatac
     6301 acgattgcat ggttacaaag tcttttttat aatccgccct catcaaaccg acccgaaacg
     6361 aaaacgccat tatgagaaaa accaaaaccg aagccttgaa aaccaaagaa cacctgatgc
     6421 ttgccgcctt ggaaaccttt taccgcaaag ggattgcgcg cacctcgctc aacgaaatcg
     6481 cccaagccgc cggcgtaacg cgcggcgcgc tctattggca tttcaaaaat aaggaagact
     6541 tgttcgacgc gctgttccaa cgtatctgcg acgacatcga aaactgcatc gcgcaagatg
     6601 ccgaagatgc cgaaggaggg tcttgggcgg tattccgcca cacgctgctg cactttttcg
     6661 agcggctgca aagcaacgac atctactaca aattccacaa catcctgttt ttaaaatgcg
     6721 aacacacgga gcaaaacgcc gccgttatcg ccattgcccg caagcatcag gcaatctggc
     6781 gcgagaaaat taccgccgtt ttgaccgaag cggtggaaaa tcaggatttg gctgacgatt
     6841 tggacaagga aacagcggtc atcttcatca aatcaacctt ggacgggctg atttggcggt
     6901 ggttctcttc ctgcgaacgt ttcgatttgg gcaaaaccgc cccgcgcatc atcgggataa
     6961 tgatggacaa cttggaaaac catcccgacc tgcgccggaa ataatcaagc cttggtaaca
     7021 atgccgtctg aaacgaacaa accctttcag acggcatcaa aatgacacaa agccttcttc
     7081 taaaaataca tattgagacc tttgcaataa cataggttac taaaatttta tgctcaatct
//
LOCUS       DBBZYD010000104         7068 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.104, whole genome shotgun sequence.
ACCESSION   DBBZYD010000104 DBBZYD010000000
VERSION     DBBZYD010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7068
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.104"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(78..1424)
                     /gene="mnmE"
                     /locus_tag="ACJJDL_001809"
     CDS             complement(78..1424)
                     /gene="mnmE"
                     /locus_tag="ACJJDL_001809"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HGG7574477.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDNGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1555..1710
                     /locus_tag="ACJJDL_001810"
     CDS             1555..1710
                     /locus_tag="ACJJDL_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574478.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1707..2138
                     /locus_tag="ACJJDL_001811"
     CDS             1707..2138
                     /locus_tag="ACJJDL_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HGG7574479.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGS
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2272..6642
                     /gene="app"
                     /locus_tag="ACJJDL_001812"
     CDS             2272..6642
                     /gene="app"
                     /locus_tag="ACJJDL_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HGG7574480.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFTYKIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGRKYIDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPRQNGKYSFHD
                     NNNGTGKIDAKHEHNSLPNRLKTRTVQLFNVSLSETAQEPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGKVILDQQADENNKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDIATTGNNNSLDSKKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLNDHWSQKEGIPRGEIVWDNDWINRTFKA
                     ENFQIKGGQAVVSRNVAKVKGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEK
                     TITDDKVIASLTNTDISGNVSLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNG
                     DLSLVGNAQATFNQATLNGNTSASGNASFNLSDHAVQNGSLTLSGNAKANVSHSALNG
                     NVSLADKAVFHFESSRFTGQISGSKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSATDAPRRRSRRSLLSVTPPASAESHFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAGKDNAQSLDALIAAG
                     RDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQREAETQPATTAFP
                     RARRARRDLPQPQPQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFAE
                     DRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTF
                     DDGIGNSARLAHGAVFGQYGIGRFDIGISTGAGFSSGSLSDGIGSKIRRRVLHYGIQA
                     RYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQ
                     HISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAA
                     AKGPQLEAQHSAGIKLGYRW"
     gene            complement(6958..>7068)
                     /locus_tag="ACJJDL_001813"
     CDS             complement(6958..>7068)
                     /locus_tag="ACJJDL_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HGG7574481.1"
                     /translation="RAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT         1879 a         2042 c         1713 g         1434 t
ORIGIN      
        1 accaaacgga tcggattccc gtttttatgg gataacggaa tgttcagccg gacaccgcca
       61 cgatgctttc gatccgttta ttttccgata caaaacctcg aaaaaatcac gccgagcagg
      121 tcgtccgccg taaactcgcc cgtgatttcg ccgcatgcga cctgcgccaa gcgcaagtgt
      181 tcggcaaaca gctcgatttg atggttgccg cacaatgccg ccagcgacaa ttcttcctgc
      241 gctgctttga gtgcgttgac gtgccgcgtc cgcgccaaaa acagcccttc gccctcgccc
      301 tgccatccgg cctcgcgcaa caacgtccgt ttcagcgcgt ccaagccgtc gccggttttc
      361 gccgacagcg cgatgacggt ttccgcgccc gtaccgaacc cgcctgccgc gtgtgcgtgc
      421 aaatcggatt tgctgtggat ttcgatgcgt ttcaactccg gcggcaacgc gtccaaaatc
      481 gcccgtgtct tgtcgttcac gccttcgcgc ggatcgacca acaccagcgc gacatcggct
      541 tcggatacgg ctttgcggct gcgttcgatg ccgatgcgtt cgaccacgtc gtccgtctcg
      601 cgcaaacctg ccgtatcgac aatatgcacc ggaacgccgt caatcaggat acgttccctg
      661 accgcgtcgc gcgtcgttcc ggcaatatcg gtaacaatcg ccacttcgtc gcccgccagc
      721 gcgttcaaca ggctggattt gccgacattc ggcgcgccga ccaatacgac attcagacct
      781 tcgcgcaaaa tcgcgccctg ctgcgcgttg gcaagcacat catccacggc gcggcgcaag
      841 ccgtccagtt tgccgcgtgc gtctgccgct tcgagaaaat caatgtcttc ctcgggaaaa
      901 tctaacgtcg cttcgaccag catccgcaag gtaatcaagt cttcgaccag accgtgtatc
      961 cgccgcgaaa aatcgccttt gagcgagcgc aacgccagac gcgccgccga acggctggat
     1021 gcgtcaatca aatccgccac gccttccgcc tgtgccaagt ccagtttgtc gtttaaaaac
     1081 gcacgcttcg taaactcgcc cggttcggca aggcgcgcgc ccaattccaa acagcggttc
     1141 agcagcatat ccatcactac cggcccgccg tgtccctgaa gctcgataac atcttcgccc
     1201 gtaaaacttg ccggtgcggc aaaaaaaagc aaaagcccgt tgtcgattgc ctgaccgtcc
     1261 gcgtccgtaa aatcagcata ggttgccacg cgcggcttgg gcgttttccc acacaaagcc
     1321 tctgccatcg gcagcaggtt tttccccgat atgcgtatca cgcccacgcc gccgcgcccg
     1381 ggtgcggtag cgactgccgc aatcgttgga acgttatccg acataaaacc cccgaaaatt
     1441 caaaacagcc gcgattatag caaatgccgt ctgaagtccg acggtttggc tttcagacgg
     1501 cataaaaccg caaaaatgct tgataaatcc gtccgcctga cctaatataa ccatatggaa
     1561 aaacgaaaca catacgcctt cctgctcggt ataggctcgc tgctgggtct gttccatccc
     1621 gcaaaaaccg ccatccgccc caatcccgcc gacgatctca aaaacatcgg cggcgatttt
     1681 caacgcgcca tagagaaagc gcgcaaatga ccgaaaacgc acaggacaag gcgcggcagg
     1741 ctgtcgaaac cgtcgtcaaa tccccggagc ttgtcgagca aatcctgtcc gacgagtacg
     1801 tgcaaataat gatagcccgg cgtttccatt cgggatcgtt gccgccgccg tccgacttgg
     1861 cgcaatacaa cgacattatc agcaacgggg cagaccgcat tatggcaatg gcggaaaaag
     1921 aacaagccgt ccggcacgaa accatacggc aagaccaaac cttcaacagg cgcgggcaac
     1981 tgtacggctt catcagcgtc atcctgatac tgctttttgc cgtcttcctc gtatggagcg
     2041 gctaccccgc aaccgccgcc tcccttgccg gcggcacagt ggttgccttg gcgggtgctt
     2101 tcgtgattgg aagaagccga gaccaaggca aaaattaatg acaaatccta gggcgtgctt
     2161 catatccgcc cgaacgccga accgcacata taggcacatc ccgcgcgccg cccggaagcg
     2221 gaagccgcgc cctcccaaac aaacccgaat cccgtcagat aaggaaaaat aatgaaaaca
     2281 accgacaaac ggacaaccga aacacaccgc aaagccccga aaaccggccg catccgcttc
     2341 tcgcctgctt acttagccat atgcctgtcg ttcggcattc ttccccaagc ttgggcggga
     2401 cacacttatt tcggcatcaa ctaccaatac tatcgcgact ttgccgaaaa taaaggcaag
     2461 tttgcagtcg gggcgaaaga tattgaggtt tacaacaaaa aaggggagtt ggtcggcaaa
     2521 tcaatgacaa aagccccgat gattgatttt tctgtggtgt cgcgtaacgg cgtggcggca
     2581 ttggtgggcg atcaatatat tgtgagcgtg gcacataacg gcggctataa caacgttgat
     2641 tttggtgcgg aaggaagcaa tcccgatcaa catcgtttta cttataaaat tgtgaaacgg
     2701 aataattata aagcagggac taacggccat ccttatggcg gcgattatca tatgccgcgt
     2761 ttacataaat ttgtaaccga tgcagaacct gttgaaatga ccagttatat ggatgggcgg
     2821 aaatatatcg atcaaaataa ttaccctgac cgtgttcgta ttggggcagg caggcaatat
     2881 tggcgatctg atgaagatga gcccaataac cgcgaaagtt catatcatat tgcaagtgcg
     2941 tattcttggc tcgttggtgg caataccttt gcacaaaatg gatcaggtgg tggcacagtc
     3001 aacttaggta gtgaaaaaat taaacatagc ccatatggtt ttttaccaac aggaggctca
     3061 tttggcgaca gtggctcacc aatgtttatc tatgatgccc aaaagcaaaa gtggttaatt
     3121 aatggggtat tgcaaacggg caacccctat ataggaaaaa gcaatggctt ccagctggtt
     3181 cgtaaagatt ggttctatga tgaaatcttt gctggagata cccattcagt attctacgaa
     3241 ccacgtcaaa atgggaaata ctcttttcac gacaataata atggcacagg aaaaatcgac
     3301 gccaaacatg aacacaattc tctgcctaat agattaaaaa cacgaaccgt tcaattgttt
     3361 aatgtttctt tatccgagac agcacaagaa cctgtttatc atgctgcagg tggtgtcaac
     3421 agttatcgac ccagactgaa taatggagaa aatatttcct ttattgacga aggaaaaggc
     3481 gaattgatac ttaccagtaa catcaaccaa ggtgctggag gattatattt ccaaggagat
     3541 tttacggtct cgcctgaaaa caacgaaacg tggcaaggcg cgggcgttca tatcagtgaa
     3601 gacagtaccg ttacttggaa agtcaatggc gtggcaaacg accgcctgtc caaaatcggc
     3661 aaaggcacgc tgcacgttca agccaaaggg gaaaaccaag gctcgatcag cgtgggcgac
     3721 ggtaaagtta ttttagatca acaagcagat gaaaataata aaaaacaagc ctttagtgaa
     3781 atcggcttgg tcagcggcag gggtacggtg caactgaatg ccgataatca gttcaacccc
     3841 gacaaactct atttcggctt tcgcggcgga cgtttggatt tgaacgggca ttcactttcg
     3901 ttccaccgta ttcaaaatac cgatgaaggg gcgatgattg tcaaccacaa tcaagacaaa
     3961 gaatccaccg ttaccattac aggcaataaa gatattgcta caaccggcaa taacaacagc
     4021 ttggatagca aaaaagaaat tgcctacaac ggttggtttg gcgagaaaga tacgaccaaa
     4081 acgaacgggc ggctcaacct tgtttaccag cccgctgcag aagaccgcac cctgctgctt
     4141 tccggcggaa caaatttaaa cggcaacatc acgcaaacaa acggcaaact gtttttcagc
     4201 ggcagaccaa caccgcacgc ctacaatcat ttaaacgacc attggtcgca aaaagagggc
     4261 attcctcgcg gggaaatcgt gtgggacaac gactggatca accgcacatt taaagcggaa
     4321 aacttccaaa ttaaaggcgg acaggcggtg gtttcccgca atgttgccaa agtgaaaggc
     4381 gattggcatt tgagcaatca cgcccaagca gtttttggtg tcgcaccgca tcaaagccac
     4441 acaatctgta cacgttcgga ctggacgggt ctgacaaatt gtgtcgaaaa aaccattacc
     4501 gacgataaag tgattgcttc attgaccaat accgacatca gcggcaatgt cagccttgcc
     4561 gatcacgctc atttaaatct cacagggctt gccacactca acggcaatct tagtgcaaat
     4621 ggcgatacac gttatacagt cagccacaac gccacccaaa acggcgacct tagcctcgtg
     4681 ggcaatgccc aagcaacatt taatcaagcc acattaaacg gcaacacatc ggcttcgggc
     4741 aatgcttcat ttaatctaag cgaccacgcc gtacaaaacg gcagtctgac gctttccggc
     4801 aacgctaagg caaacgtaag ccattccgca ctcaacggta atgtctccct agccgataag
     4861 gcagtattcc attttgaaag cagccgcttt accggacaaa tcagcggcag caaggatacg
     4921 gcattacact taaaagacag cgaatggacg ctgccgtcag gcacggaatt aggcaattta
     4981 aaccttgaca acgccaccat tacactcaat tccgcctatc gccacgatgc ggcaggggcg
     5041 caaaccggca gtgcgacaga tgcgccgcgc cgccgttcgc gccgttccct attatccgtt
     5101 acacctccgg cttcggcaga atcccatttc aacacgctga cggtaaacgg caaattgaac
     5161 ggtcagggaa cattccgctt tatgtcggaa ctcttcggct accgcagcga caaattgaag
     5221 ctggcggaaa gttccgaagg cacttacacc ttggctgtca acaataccgg caacgaacct
     5281 gcaagcctcg aacaattgac ggtagtggaa gggaaagaca acaaaccgct gtccgaaaac
     5341 cttaatttca ccctgcaaaa cgaacacgtc gatgccggcg cgtggcgtta ccaactcatc
     5401 cgcaaagacg gcgagttccg cctgcataat ccggtcaaag aacaagagct ttccgacaaa
     5461 ctcggcaagg cagaagccaa aaaacaggcg ggaaaagaca acgcgcaaag ccttgacgcg
     5521 ctgattgcgg ccgggcgcga tgccgtcgaa aagacagaaa gcgttgccga accggcccgg
     5581 caggcaggcg gggaaaatgt cggcattatg caggcggagg aagagaaaaa acgggtgcag
     5641 gcggataaag acagcgcctt ggcgaaacag cgcgaagcgg aaacccagcc ggctaccacc
     5701 gccttccccc gcgcccgccg cgcccgccgg gatttgccgc aaccgcagcc ccaaccgcaa
     5761 cctcaacccc aaccgcagcg cgacctgatc agccgttatg ccaatagcgg tttgagtgaa
     5821 ttttccgcca cgctcaacag cgttttcgcc gtacaggacg aattggaccg cgtgtttgcc
     5881 gaagaccgcc gcaacgccgt ttggacaagc ggcatccggg acaccaaaca ctaccgttcg
     5941 caagatttcc gcgcctaccg ccaacaaacc gaccttcgcc aaatcggtat gcagaaaaac
     6001 ctcggcagcg ggcgcgtcgg catcctgttt tcgcacaacc ggaccgaaaa caccttcgac
     6061 gacggcatcg gcaactcggc acggcttgcc cacggcgccg ttttcgggca atacggcatc
     6121 ggcaggttcg acatcggcat cagcacgggc gcgggtttta gcagcggcag tctttcagac
     6181 ggcatcggaa gcaaaatccg ccgccgcgtg ctgcattacg gcattcaggc acgataccgc
     6241 gccggtttcg gcggattcgg catcgaaccg cacatcggcg caacgcgcta tttcgtccaa
     6301 aaagcggatt accgctacga aaacgtcaat atcgccaccc ccggccttgc gttcaaccgc
     6361 taccgcgcgg gcattaaggc agattattca ttcaaaccgg cgcaacacat ttccatcacg
     6421 ccttatttga gcctgtccta taccgatgcc gcttcgggca aagtccgaac gcgcgtcaat
     6481 accgccgtat tggctcagga tttcggcaaa acccgcagtg cggaatgggg cgtaaacgcc
     6541 gaaatcaaag gtttcacgct gtccctccac gctgccgccg ccaaaggccc gcaactggaa
     6601 gcgcaacaca gcgcgggcat caaattaggc taccgctggt aaccgccgga tatgccgaaa
     6661 ggggtctgac gatgccaccg tgcgctgtca aacccttttt ctgccgccgc cttgtgcctg
     6721 ctccattgtc tgataaccgt caaattgatt tttagcccat gtttggtggg tcggggaaat
     6781 ctatatcttc gtccgtgccg aaatagtctg agacctttgc aaaattcctt tccctcccga
     6841 cagccgaaac ccaaacacag gttttcgtct attttcgccc caaatacctc ctaattctac
     6901 ccaaataccc ccttaatcct ccccggacac ctgataatca ggcatccgtg ctgcctttta
     6961 ggcggcagcg ggcgcactta gcctgttggc cgctttcaac aggttcaaac acatcgcctt
     7021 cagatggctt tgcgcactca ctttaatcag tccgaaatag gctgcccg
//
LOCUS       DBBZYD010000105         6811 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.105, whole genome shotgun sequence.
ACCESSION   DBBZYD010000105 DBBZYD010000000
VERSION     DBBZYD010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6811
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.105"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(430..960)
                     /locus_tag="ACJJDL_001814"
                     /pseudo
     CDS             complement(430..960)
                     /locus_tag="ACJJDL_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(1968..2738)
                     /gene="xth"
                     /locus_tag="ACJJDL_001815"
     CDS             complement(1968..2738)
                     /gene="xth"
                     /locus_tag="ACJJDL_001815"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG7574482.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(2798..3079)
                     /locus_tag="ACJJDL_001816"
     CDS             complement(2798..3079)
                     /locus_tag="ACJJDL_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HGG7574483.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSNHLNRLRVEGLVDFTRYHRIIEYRLVSEEAAAILHTVRDLENKRVA"
     gene            complement(3485..4366)
                     /gene="nadC"
                     /locus_tag="ACJJDL_001817"
     CDS             complement(3485..4366)
                     /gene="nadC"
                     /locus_tag="ACJJDL_001817"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HGG7574484.1"
                     /translation="MPSENTLFSLPDTLLRPIVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQAVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVQQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTIYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFVA"
     gene            complement(4442..5380)
                     /locus_tag="ACJJDL_001818"
     CDS             complement(4442..5380)
                     /locus_tag="ACJJDL_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574485.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
     gene            5687..6799
                     /gene="nadA"
                     /locus_tag="ACJJDL_001819"
     CDS             5687..6799
                     /gene="nadA"
                     /locus_tag="ACJJDL_001819"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HGG7574486.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEASTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPEAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSHPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGHNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
BASE COUNT         1606 a         1749 c         1809 g         1647 t
ORIGIN      
        1 cgcgggaatg acgaatccat ccgcacggaa acctgcacca cgtcattcct acgaatctac
       61 atcccgtcat tcccacaagg acagaaaacc aaaatcagaa acctaaaatt cgtcattccc
      121 gcgaaagtgt gaatctagaa atgaaaagca acaagcattt atcgaaaata actgaaaccg
      181 aacagactag attcccgcct gcgcgggaat gacgaatcca tccatacgga aacctgcacc
      241 acgtcattca cacgaaagtg ggaatccaag acgaaaaatc tcaagaaacc gttttacctg
      301 ataagtttcc gcaccgaccg gtctggattc ccgcctgcgc gggaatgacg gttcgggtat
      361 ttctgatgat tcggcgagcc gtagcaactg tatttttcac cccgtcgggc aaaaatacca
      421 aaactcaaat caagccgtcc ggataccgtt ttcggcggta tcgttttcgg cggtatcgtt
      481 ttcggcaaaa taatcacgca tccgggcatt cgatatcgtc agcagtttgc gcatacatgc
      541 cgtaacggca accttatacg gcttaccctc ggacggcagg cgttggtaga aatcccgaat
      601 aagcggttca aaacgtgtcg ctgccacggt agccatatac agtgccttac gcaccgcaga
      661 ccttccgcca aagcagcggc ttttgaattt ggtttccccg ctctccctcg ggtgcggggc
      721 aatgccgacc aaacccgcta tccgtttgtg cgacagccgc cccaattcgg gtagcattgc
      781 catcagcgta gccgtcgtta tcgaaccgat gcctttgatt tgttctgcca cttgggcttt
      841 gccgtcaaaa tgcgtgtggg tgtggtcgtc gatttgtttg tccaattcgt caatcagccg
      901 gtcaaaatgg gcaatcagtt gtttgacgct tccgacttgc gtttcatgaa actgatgcag
      961 atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt acaaatagta
     1021 cggcaacgct gtactggttt aaatttaatc cactatattt tgtaatagct gccattatgc
     1081 ctactaggat atataccttc tatataatcc ttatttaaat aaaaaccctt ataaaaatct
     1141 gtgttatctg tcgggattga aaaaaagatt ttatctttct catcaggttt atatttgcta
     1201 tcaatatcaa aaagagaata aggattacaa tgagttcgac atactaggta aaaatttata
     1261 tcttggatca tgaaatattc gatatttatc aggatcgaaa gatgctaaaa attcatcaat
     1321 attggtactg gatattttgt catcactaat aaacatcgct agagatgggc gactttgatt
     1381 ttccatttgt tgattagtaa aggatataaa tactaacttg ccattgtcaa accacataga
     1441 tttatatagt ggattaaatt taaaccagta cgtcgttgcc tcgccttgcc gtactatttg
     1501 tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata gttattgcct
     1561 ttgggagaat caattctgac agcacataac ataggttcat ctttacagtc gttatattgg
     1621 gtttcatcaa actcaactgc atagcacaat aaaggcaata ggaaaaaaag gagattaatt
     1681 tattactata cataaggcag cctgactatt cattctaaaa taaatccggt ttttaatatt
     1741 tgattctgct ccggattata tacataataa attttactgc tccaaaatct gatattaacc
     1801 ctatggattt cataaatttt tcagaaaaat aggctgtgct tgaacaatcc gccgactccg
     1861 gctgtttgtc agggaaaagg caattatttt cggttagtca gcagcctatc ctattgaatc
     1921 acttaaagat atggatgttt gtcaacgcca tatcaaaaca cggtctttta ccaatcgaat
     1981 tctgccgtca ccggcgcgtg gtcgctcgga cgctccagcg cgcgcgtctc caaatcgacg
     2041 cggacatcct tcaacgccgc cgccatcgca ggcgacacca aaatatggtc gatacgcagg
     2101 cccagtttgc gttggaacat cgcgccgcga tagtcgaacc aggtatagaa cgcgccttcg
     2161 ggatggactt ggcgcaggct gtcggtcagt cccaaatcca gcaggttttg aaaccactgc
     2221 cgttcgacgg acgaacagtg gattttttcg tgccattttt cagggtcgta acagtccgca
     2281 tcggcaggcg cgatattgaa atcgcccagc aacaccagtt tgccgtggcg ggtcatttca
     2341 tcgcggacaa actccgtcag tgcggcaaac cactgttcct tatatttgaa tttggggctg
     2401 tccaaagcct cgccgttgac gcaatagaca ttgatgacgc gcacgccgct gacggttgcc
     2461 gcaatcacgc gccgttgcgg atcgtccggc agtgcgggca aaccgaaatg cacgtcctgc
     2521 ggcacgctgc ggctgacgat tgccacgccg ttgtaggttt tctgcccgct ccaaacacag
     2581 tgccagccca tcatttgcaa agcggcggcc ggaaatttgt cctgatcgag tttgagttcc
     2641 tgcaaaacca aaatatcggg cggattgtcg gcaagcaggt tttgcacctg cggcagccgc
     2701 acattgagcg aattgacatt ccaagtggtg attttcataa catttccgaa aaatgctgtc
     2761 tgaaacgttc agacggcaaa aggaaaggat tctaacacta tgccacgcgt ttgttttcca
     2821 aatcgcgaac cgtgtgcaga atcgccgccg cttcttcgga aaccaggcgg tattcgataa
     2881 tgcggtggta acgcgtaaaa tcgactagac cttccacgcg caggcggttc aaatggttgg
     2941 aaactgcggt ggccggcagg gataaggatt ttgccagttc ggcgatattg cgttcgctgt
     3001 ccaacaattg aatcagtatc gccatacgtt cgggatgcgc cataagtttg agtatggtgt
     3061 ggagcggtat tgtgttcatc ggtattccta aaacctttgc cgcccgccaa gcggattgac
     3121 gggcggcaga tatggatgat tgtgattatc tttataaatc gtattataaa tcaaatattt
     3181 atggatgatt gtacaggatt gtatgttcct tttcccactt ttttgcaaac aagcgtaaag
     3241 gcgggctttc agacggcata aaactgccgc cccccgtcct ttttcctgcc ctaccgatgc
     3301 cgccgcgctg tcgggcaaac aaaatacctg cctgaaatgc tgttttttct aaagcatcac
     3361 gacctttacg aaaaatgccg tctgaagaat ctttcagacg gcatttcctc cctgaggcaa
     3421 taaccggatt agggttaagc ggttccttgc ctgacatatc agacagccgc ccgcacccta
     3481 aaactcacgc cacgaaatcc aaacctatgt ccaacgaacg gctgctgtgg gtcagatagc
     3541 cgagggcgat gccgtccact ccggtttgcg ccacgcgctt caggcggtcg aagccgatgc
     3601 cgcccgatgc ttcgcaatag atggtgtggg ggtgggcggt ttgcgtgtgg cagcggtttg
     3661 ccgcttcttt cagggtttcg tcgtccatgt tatccagcaa aatccgttcc gcgcccgctg
     3721 cgatggcttc gtccagttgt gccaacgtat ccacttcgat ttccacgcag gtcaatgctc
     3781 cgacagcctg ttttgcctgc tgcacggctt gggcgatgct gccgcaatag gcgaggtggt
     3841 tgtctttgat gagcacggcg tcgtccaaac ccatgcggtg gttcacaccg ccgcctgccc
     3901 tgacggcgta tttttgcagg acacgcagca gggggatggt tttgcggctg cacacgatgt
     3961 ctgtaccgta ttcggcgact tcggcaacgg cacgcgcggt ggcggtggcg atgccgctta
     4021 agtgcgtgag gtagttgagc gcggtgcgtt cggcggcgag cagcgcgcgg gcgttgcctt
     4081 cgacggcggc aagcgtctga cctgcgcgga cggcttgccc gtctcggatt tcggcttgga
     4141 agcggacgga cggatccatc gtctgaaagg cgaggcgcgc taaatccatg ccggcgataa
     4201 cgccgtcttc gcggctgacg aggaagagtt tggcggtttt gtcgggggcg ataacggcgg
     4261 cggacgtaat gtcgccgcgc ctgcccaagt cttcgctcaa ggcttgttcg actatggggc
     4321 gcaacagggt gtcgggcagg gaaaagaggg tgttttcaga cggcatgagg tttcctttgt
     4381 cgaaaaagat tgatgttgca ccgatggggc aaaacttcat ttgatgccgt ctgaaaacgg
     4441 gctaacggct gcccagcggc aatccgatgt ccgaaatcag cctgtcgggc aggacgtcgt
     4501 cgcggaagcg gcaaagctgc gcgggacggc ctttgctgcc cgatacgccg gtatccgacg
     4561 gctcgataag gttttgctgc tgaatctggc ggcggaagtt ttgcttgtgc agcaatcttc
     4621 cgctgatggc ttcgacactg ttttgcagtt gcagcagcgt gaattcgggc ggcatcagtt
     4681 caaaaatcac ggggcggtat ttgattttgg cgcgcaggcg ggacagggcg gtcgccagta
     4741 cgcgacggtg atcgtggcgc atgggctgcc ccgtgagcgc gaagtcgaag tttgcctgcg
     4801 gctcggcggc ttccactatc agaccgcttt catacagcat ttcatagcgt tgtaaaacgt
     4861 attcttccga ccagttttcc ggttcgaccc cccagcacaa atgaatgcgc ttgagccgca
     4921 tttgacgcac ttcctccgtg tccgccgaat ttgcccaaat gcgcaggcgg ctgacgacgg
     4981 cgtcgcgctg cccgccgtcg gtgcgcaagt cttcccacgg gaaatagccg tagcagtcct
     5041 gccatttcgc atccgggtgc aggatgctgt cggctgcctc gcgcaccagc cccaaatagc
     5101 tgacgtacaa gacgggcatg ccgtgttcgt tgcggcggtg ggtatcgaca aaggtgtaaa
     5161 gctgttccac atagcccata ggctgcgaag tctgcttggc aacccacagc ttcacgcccg
     5221 cctgcaggga attgcgcaga ggggagagcg ggccgttggg caggagtgtg ccttgggcga
     5281 cggttaatac ccgcaggccg ccgtcggtaa cggcaatcaa tacgggaacc agctcgacga
     5341 tgctttgcgg cggggcttcg gcttcggggt aggcatccat gctcggcttt ctgcgggtgg
     5401 gaaaggcttt attgtatagt ggattaaatt taaaccagta cagcgttgcc tcgccttgcc
     5461 gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
     5521 aaccaaagcg gtttgtcgga acgaagcggg tcggttttac ggtatcgcaa acctgttttc
     5581 agacgacctt gcttattata ctcaatttga gcataatata aaaatatttc aaaatataaa
     5641 cggcaaatct ttatgccgtc tgaaaaacca gccataagga agtctcatgc aaaccgccgc
     5701 ccgccgctcg ttcgattacg atatgcccct catccaaacc ccgacttccg cctgccaaat
     5761 ccgtcaggcg tgggcgaagg ttgccgacac gcccgaccgc gagacggcag gccgtctgaa
     5821 agacgaaatc aaggctttgc tgaaggagaa aaacgcggtc ttggtggcgc attattacgt
     5881 cgatccgctg attcaggatt tggctttaga aacgggcgga tgcgtgggcg attcgctgga
     5941 aatggcgcgc ttcggcgcgg aacacgaagc tagtacattg gtggtggcgg gtgtgcgctt
     6001 catgggcgag agcgcgaaaa tcctctgccc tgaaaaaaca gtgctgatgc ctgatttgga
     6061 ggcggaatgt tctttggatt tgggctgtcc ggaagaagcg ttttcagcgt tttgcgacca
     6121 acaccccgac cgcacggtcg tagtgtacgc caacacttcc gccgccgtga aagcgcgtgc
     6181 cgattgggtg gtaacgtctt cggtggcgtt ggaaatcgta tcgtatttga aatcgcgcgg
     6241 cgagaagctg atttggggac ctgaccgcca cctcggcgac tacatccgcc gcgaaacggg
     6301 cgcggatatg ctgctgtggc agggttcgtg catcgtccac aacgaattca aagggcagga
     6361 gctggcggcg ttgaaggcgg aacaccccga agcggtggtg ctggttcatc ccgaatcgcc
     6421 acaaagcgtc atcgaactgg gcgacgtggt cggctcgacc agcaaactgc tcaaagccgc
     6481 cgtatcgcac cctgaaaaaa aattcatcgt agcgaccgac ttgggcatcc tgcacgaaat
     6541 gcaaaagcag gcacccgaca aagaatttat cgccgcaccg acggcgggca acggtggaag
     6601 ctgtaaaagc tgcgcgttct gcccttggat ggcgatgaat tcgctgggcg gcatcaaata
     6661 cgccctgaca agcggacaca acgaaatcct gttggacagg aagctgggcg aagccgccaa
     6721 actgcctttg cagcgtatgc tcgacttcgc ggcaggactc aagcgcgggg atgtgttcaa
     6781 cggcatggga cccgcctgat ttgccgtcca t
//
LOCUS       DBBZYD010000106         6730 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.106, whole genome shotgun sequence.
ACCESSION   DBBZYD010000106 DBBZYD010000000
VERSION     DBBZYD010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6730
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.106"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            190..4663
                     /locus_tag="ACJJDL_001820"
                     /pseudo
     CDS             190..4663
                     /locus_tag="ACJJDL_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678286.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family peptidase"
     gene            4895..6349
                     /gene="mgtE"
                     /locus_tag="ACJJDL_001821"
     CDS             4895..6349
                     /gene="mgtE"
                     /locus_tag="ACJJDL_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HGG7574487.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLGELHPADVAAVLESLPPRERNVVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRVTVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(6435..6548)
                     /locus_tag="ACJJDL_001822"
                     /pseudo
     CDS             complement(6435..6548)
                     /locus_tag="ACJJDL_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated molecular chaperone Hsp33"
BASE COUNT         1772 a         2165 c         1602 g         1191 t
ORIGIN      
        1 atataatata gtggattgaa tttaaatcag gacaaggcga cgaagccgca gacaatacag
       61 atagtacggc aaggcgaggc aacgctgtac tggtttttgt taatccacta tataaatcca
      121 gcacaaaacg ggatcggtga ttcttgtccg caagaatcgt tgattttctc tattacacgg
      181 ataatcatca tgcgcttcac acacaccacc ccattttgtt ccgtattgtc caccctcggt
      241 ctttttgccg tttcccctgc ttactcatcc attgtccgca acgatgtcga ttaccaatat
      301 tttcgcgact ttgccgaaaa taaaggcgcg ttcgccgtag gtgcaagcaa tatttccatc
      361 caagacaagc aaggcaaaat attaggcagg gttctcaacg gcatccccat gcccgacttc
      421 cgcgtcagca accgccaaac cgccatcgcc accctggttc acccccaata cgtcaacagt
      481 gtcaaacaca acgtcggcta cggttccata caattcggca acgacaccca aaatccagaa
      541 gaacaagcct atacctaccg cctcgtatca cgcaacccgc acccggacta cgactaccac
      601 cttccccgcc tcaacaaact ggttaccgaa atctcacctg ccgcactcag cagcgtaccc
      661 ttgcttggaa acggccagcc aaaggccaat gcctacctcg ataccgaccg cttcccatac
      721 tttgtacgac tcggctcagg cacgcaacaa gtccgcaaag cagacggcac gcgtacacga
      781 accgccccgg cataccaata cctgaccggc ggcacgccgc tgaaagtatt ggggttccaa
      841 aaccacggct tactcgtcgg cggcagcctg accgaccaac cccttaacac ctacgcaatc
      901 gccggagaca gcggttcccc cctgtttgcc ttcgacaagc atgaaaaccg ctgggtgctt
      961 gcgggcgtac tcagcaccta cgccggcttc gataatttct tcaacaaata catcgtcacg
     1021 caacccgaat tcatccgttc caccatccgc caatacgaaa cccggctgga tgtcgggctg
     1081 accaccaacg aactcatatg gcgcgacaac ggtaatggcg acagcaccct gcaagggctc
     1141 aacgaacgca tcaccctgcc cattgcaaac ccttcgcttg ccccacaaaa cgacagcagg
     1201 cacatgccgt ctaaagatgc cggcaaaacg ctcatcctat ccagcaggtt cgacaacaaa
     1261 acactgatgc tggcagacaa tatcaaccaa ggcgcaggcg cattgcagtt cgacagcaac
     1321 ttcaccgtcg tcggtaaaaa ccacacatgg caaggtgcag gcgttatcgt agccgacggc
     1381 aaacgcgtct tctggcaagt cagcaacccc aaaggcgacc ggctctccaa actgggcgca
     1441 ggcacgctta tcgccaacgg acaaggcatc aaccagggcg acatcagcat cggggaaggc
     1501 actgtcgtac tcgcccaaaa agctgcttca gacggcagca aacaagcatt caaccaagtc
     1561 ggcatcacca gcggcagggg cacggccgtc ctcgccgaca gccagcaaat caaacccgaa
     1621 aacctctatt tcggcttcag gggcggacgg ctcgacctca acggcaacaa ccttgccttt
     1681 acccatatcc gccatgcgga cggcggcgcg cagatcgtca accacaaccc tgaccaagcc
     1741 gcgacactga cgctgaccgg caaccccgtc ctcagtcccg agcatgtcga gtgggtgcaa
     1801 tggggcaacc gtccgcaagg caacgcggcg gtttacgaat acatcaaccc gcaccgcaac
     1861 cgtcggaccg actacttcat actcaaaccc ggcggcaacc cgcgcgaatt tttcccgtta
     1921 aatatgaaaa actcaacaag ctggcaattt atcggcaaca acaggcaaca ggccgccaaa
     1981 caagtcgccc aagccgaaaa tgcccgcccc gacctaatta ccttcggcgg atacttgggt
     2041 gagaacgcgc aaacgggcaa agccgcaccg agttacagca aaaccaatat cgaatgggtg
     2101 aatggtccaa acaccccaca caagccctcg ccctatacga atacgccaac ccgcacaggg
     2161 gcaggcgtac cgacgattac cgcctcaaag aaagcggcaa ccccggcgcc tacttcccat
     2221 ggaatgccta cagcacccaa gcctgggaat ttctcggaca tgaccggcga agcagccata
     2281 gaaaaaaccc gccatatcgc aaatgccgcc gtatacggca ggcccgaata ccgttacaac
     2341 ggcgcactca acctgcacta tcgtcccaaa cgcaccgaca gcacgctgtt gctcaacggc
     2401 ggcatgaacc ttaacgggga agtcttgatt gagggcggca atatgattgt gtcaggcagg
     2461 cccgtacccc atgcctacga ccaccaggcc aaacgcgaac ccgttcttga aaacgaatgg
     2521 accgacggca gcttcaaggc tgcacggttc accctgcgaa accatgcccg actgacggca
     2581 gggcgcaata ccgcgcatct ggacggcgac ataaccgcat acgatctgtc cggcatcgac
     2641 ctcggcttta cccaaggcaa aacaccggaa tgctaccgct cctaccatag cggcagcacc
     2701 cactgcacac ccaacgccgt tttaaaagcc gaaaactatc gtgcactacc tgcaacgcaa
     2761 gtacgcggcg acattaccct taacgaccgt tcagagctcc gcctgggcaa agcacacctg
     2821 tacggcagca tccgtgccgg caaagacacc gcagtccgca tggaagcaga cagcaactgg
     2881 acactttccc agtccagcca caccggcgca ctgacgcttg acggcgcaca aattaccctg
     2941 aaccccgatt tcgccaataa tacacacaac aaccgcttca acacactgac cgtcaacggc
     3001 acacttgacg ggttcggcac attccgattc ctgaccggca tcgtccgaaa acaaaatgcc
     3061 ccccctcaaa ctggaagggg acagccgcgg cgcattccaa atccacgtca aaaacaccgg
     3121 acaagaacct caaacaaccg aatcgcttgc acttgtgagc ctcaatccga aacacagcca
     3181 ccaagcccga ttcaccctcc aaaacggcta tgccgatttg ggtgcctacc gctacatcct
     3241 ccgcaaaaac aacaacggat acagcctgta caacccgctc aaagaggccg aacttcaaat
     3301 tgaagccacg cgtgcggaac atgagcgcaa ccaacaggca tacaaccaat tacaggcaac
     3361 cgacatcagc agacaggttc aacatgactc tgacgcgacc aggcaggcac tacaggcctg
     3421 gcagaacagt caaaccgaac ttgcccgcat cgacagccaa gtccaatatc tgtccgccca
     3481 attgaaacag acagacccgc tgaccggcat tctgacgcgt gcccaaaacc tgtgtgccgc
     3541 acaaggatac agtgtcgata tctgccgtca ggttgccaaa gccgccgaca cgaacgacct
     3601 gacactcttc gaaaccgaac tggatacgta tatagaacgt gtagaaatgg ccgaatccga
     3661 acttgacaaa gcacggcaag gcggcgatgc gcaagccgtc gaaacagccc ggcacgccta
     3721 cctgaacgca ctcaaccgtc tgtcccgaca aatccacagt ttgaaaaccg gcgttgccgg
     3781 catccgtatg ccgaacctgg ccgaactgat cagccggtcg gccaacaccg ccgtttccga
     3841 acaggccgcc tacaataccg gccggcaaca ggcgggacgc cgcatcgacc gccaccttac
     3901 cgatccgcag cagcaaaaca tctggctgga aaccggtacg caacaaaccg actaccatag
     3961 cggcacacac cgtccctacc aacaaactac caactatgca catatcggca tccaaaccgg
     4021 catcaccgac cgtctcagtg tcggtacgat tttaaccgat gagcgcacaa acaaccgttt
     4081 tgatgaaggc gtatccgccc gaaaccgcag caacggcgca catctgttcg tcaaagggga
     4141 aaacggcgca ctctttgccg cggcagattt aggctacagc aacagccgta cccgatttac
     4201 cgattatgac ggggctgccg tccgccgcca cgcatgggat gcaggcatca acaccggcat
     4261 caaaatcgat accggcatca acctcagacc ctatgccggc atccgtataa accgcagcaa
     4321 cggcaaccgg tacgtactcg acggcgcaga gataaacagc ccggcgcaaa tccaaaccac
     4381 atggcatgcc ggcatccgtc tcgataaaac cgtcgaactg ggtcaagcca agctgacccc
     4441 cgctttcagc agcgattact accatacccg ccaaaacagc ggttccgccc tcagcgtcaa
     4501 cgaccgtacc ttactgcagc aagccgccca cggcacactg cataccctgc aaatcgacgc
     4561 cggatacaaa ggctggaacg ccaaacttca tgccgcttac ggcaaagaca gcaacaccgc
     4621 ccgccacaaa caggcaggaa tcaaaatagg ctacaactgg taacaagccg gtaaaaatgc
     4681 cgtctggaac ccgcgtttca gacggcattt gcgttaaaaa tagtaaaccg tttcaaaagg
     4741 gagtagaata gtgccgtttc caaccctgcg cctgtaccgt caggctttta ttatggacct
     4801 tcccagttcg tttttactga acgccccttc cgattccaaa cgacaataac catcccgccg
     4861 gaatgcctcc ccgcacacgg cgggcggagc atttatgagc atcgaacaca ctcctccgac
     4921 acacgacggc gaaaccggtc aaaaccatgc cgaacgccct tccgccgatt tcgaccgtgt
     4981 ccactccctc tgcgaaatcc tcgaacctgc ttttgaacaa atcgaaaacg gcacaccgct
     5041 cgaagacgcg ccgctgcgcg acaagctgac cgagctgacc gtcctcttgg gcgagctgca
     5101 ccctgccgac gtggcggcgg tgttggaatc gctgccgccg cgcgaacgca acgtcgtttg
     5161 gcttctggtc aaacccgaag acgacggcga agtattgctg gaagtatccg acgcggtgcg
     5221 cgaaacactg atcgagtcga tggataagga cgaattgttg gcggcagttg acgatttgga
     5281 cgcggacgaa ttggcggaac tggcagacga tttgccgcac caagtggttt acgaagcctt
     5341 acagacgcgt gatgaggaag aacgcgccca agtcaaggcg gcaatgtcct acgaagacaa
     5401 ccaagtcggt gcgattatgg acttcgagtt ggtcagcatc cgcgccgatg tcgcctgcga
     5461 agtggtgctg cgttacctgc gccgcttcga cagcctgccc gaccacacgg ataaaatctt
     5521 cgtggttgac gaaaacgatg tgttgcaggg cgtgctgccc atccgcaaac ttttggtcgc
     5581 cgatcccgaa gacttggtgg aaaacgtgat ggcgaaagat gtcgtgcgtt tccgcgccga
     5641 agacgacgtg gaagaagcag cgcaggcgtt tgaacgctat gacttggtta ccgcgcccgt
     5701 cgtcgatgaa aacaaaaagc tcatcggcag ggtgaccgtt gacgaaatgg tggacgtgat
     5761 ccgcgaagaa tccgaagcag atatgttgaa catggcgggt ttgcaagaag aggaagactt
     5821 attcgccccc gtcttggatt ccgtcaaaaa ccgctggatg tggctcgccg tcaacctctg
     5881 caccgccttc cttgccagcc gcgtcatcgg cgcgtttgaa ggcagcatcg aaaaaatcgt
     5941 cgcactcgcc gcgctgatgc ccatcgtcgc cggtatcggc ggcaactcgg gcaaccagac
     6001 gattaccatg attgtccgcg ccatggcgat ggggcaactg acaggcatgc aggcaggcag
     6061 gctgttgaaa aaagaagtcg gcgttgccct agtcaacggc attatctggg gaaccgtcat
     6121 gggcgcggtt tcatggctgc tctacggcag cctcggcatc gggctggtta tgattgccgc
     6181 gatgacgctc aacctcctgc tggcggcaac cgtcggcgta ttaattcccg tggtaatgga
     6241 aaagttcgga cgcgatcccg cactgggcag ctcggtgctg attaccgccg ttaccgactc
     6301 cggcggcttc ctgattttct tgggtctcgc caccctgttc ctgctttaaa tgccgtctga
     6361 acccgcgcaa aaatgccgtc tgaagcggaa gctgcttcag acggcatttg actatttatc
     6421 cttgttgcac aagattattg gacggtatgc cggggcagcc ctttggcaac gccgaccaca
     6481 tcctccccga acagcgcgtt gacatcggtt tcgtcaaaca catatttgct gagacctttg
     6541 caaaattcct ttccctcacg acaaccgaaa tcccaacaca ggttttcggc tgttttcgcc
     6601 ccaaataccg cctaatttta cccaaacacc cccttaatcc tgcccggata cccgataatc
     6661 aggcatccgg gctgcttttt aggcggcagc ggacgcactt aacctgttgg ccgctttcaa
     6721 caggttcaaa
//
LOCUS       DBBZYD010000107         6660 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.107, whole genome shotgun sequence.
ACCESSION   DBBZYD010000107 DBBZYD010000000
VERSION     DBBZYD010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6660
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.107"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            285..2132
                     /locus_tag="ACJJDL_001823"
     CDS             285..2132
                     /locus_tag="ACJJDL_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HGG7574488.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATVDL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLTGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMELKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            2187..6356
                     /locus_tag="ACJJDL_001824"
     CDS             2187..6356
                     /locus_tag="ACJJDL_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HGG7574489.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADCNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRINPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDRKTGISVKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     HFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNVAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTRKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNGKGK"
BASE COUNT         1570 a         2133 c         1749 g         1208 t
ORIGIN      
        1 aaggttgcgt tgatttgccc tatgcagtgc cggacaggct ttgcttgatc attcggcgca
       61 acggtttaat ttattgaacg aaaataaatt tatttaatcc tgcctatttt ccggcactat
      121 tccgaaacgc agcctgtttt ccatatgcgg attagaaaca aaatacctta aaacaagcag
      181 atacatttcc ggcgggccgc aacctccgaa ataccggcgg cagtatgccg tctgaagcgt
      241 cccgccccgt ccgaacagtg ttaaaatcga aatccgccac accgatgcac gacacccgta
      301 ccatgatgat caaaccgacc gccctgctcc tgccggcttt atttttcttt ccgcacgcat
      361 acgcgcctgc cgccgacctt tccgaaaaca aggcggcggg tttcgcattg ttcaaaaaca
      421 aaagccccga caccgaatca gttaaattaa aacccaaatt ccccgtccgc atcgacacgc
      481 aggatagtga aatcaaagat atggtcgaag aacacctgcc gctcatcacg cagcagcagg
      541 aagaagtatt ggacaaggaa cagacgggct tcctcgccga agaagcaccg gacaacgtta
      601 aaaccatgct ccgcagcaaa ggctatttta gcagcaaagt cagcctgacg gaaaaagacg
      661 gagcttatac ggtacacatc acaccgggcc cgcgcaccaa aatcgccaac gtcggtgtcg
      721 ccatcctcgg cgacatcctt tcagacggca acctcgccga atactaccgc aacgcgctgg
      781 aaaactggca gcagccggta ggcagtgatt tcgatcagga cagttgggaa aacagcaaaa
      841 cttccgtcct cggcgcggta acgcgcaaag gctacccgct tgccaagctc ggcaacaccc
      901 gggcggccgt caaccccgat accgccaccg tcgatttgaa cgtcgtcgtg gacagcggcc
      961 gccccatcgc cttcggcgac tttgaaatca ccggcacaca gcgttacccc gaacaaatcg
     1021 tctccggcct ggcgcgcttc caaccgggca cgccctacga cctcgacctg ctgctcgact
     1081 tccaacaggc actcgaacaa aacgggcatt attccggcgc gtccgtacaa gccgacttcg
     1141 accgtctcca aggcgaccgc gtccccgtca aagtcagcgt aaccgaggtc aaacgccaca
     1201 agctcgaaac cggcatccgc ctcgattcgg aatacggttt gggcggcaaa atcgcctacg
     1261 actattacaa cctcttcaac aaaggctata tcggctcggt cgtctgggat atggacaaat
     1321 acgaaaccac gcttgccgcc ggcatcagcc agccgcgcaa ctatcggggc aactactgga
     1381 caagcaacgt ttcctacaac cgttcgacca cccaaaacct cgaaaaacgc gccttctccg
     1441 gcggcatctg gtatgtgcgc gaccgcgcgg gcatcgatgc caggctgggg gcagagtttc
     1501 tcgcagaagg ccggaaaatc cccggctcgg atgtcgattt gggcaacagc cacgccacga
     1561 tgctgaccgc ctcttggaaa cgccagctgc tcaacaacgt gctgcacccc gaaaacggcc
     1621 attacctcga cggcaaaatc ggtacgactt tgggcacatt cctgtcctcc accgcgctga
     1681 tccgcacctc tgcccgcgca ggttatttct tcacgcccga aaacaaaaaa ctcggcacgt
     1741 tcatcatacg cggacaagca ggttacaccg ttgcccgcga caatgccgac gttccttcgg
     1801 ggttgatgtt ccgcagcggc ggcgcgtctt ccgtgcgcgg ttacgaactc gacagcatcg
     1861 ggcttgccgg cccgaacgga tcggtcctgc ccgaacgcgc cctcttgacg ggcagcctgg
     1921 aataccaact gccgtttacg cgcacccttt ccggcgcggt attccacgat atgggcgatg
     1981 ccgccgccaa tttcaaacgt atggagctga aacacggttc gggactgggc gtgcgctggt
     2041 tcagcccgct cgcgccgttt tccttcgaca tcgcctacgg gcacagcgat aagaaaatcc
     2101 gctggcacat cagcttggga acacgcttct aaaccgatac ggccgcttca gacggcattg
     2161 cagcaaacta ttttgaaaca gacattatga ccgataccgc accgacagat accgatccga
     2221 ccgaaaacgg cacgcgcaaa atgccgtctg aacaccgccc caccccgccg gcaaaaaaac
     2281 gccgcccgct gctgaagctg tcggcggcac tgctgtctgt cctgattttg gcagtatgtt
     2341 tcctcggctg gctcgccggc acggaagcgg gtttgcgctt cgggctgtac caaatcccgt
     2401 cttggttcgg cgtaaacatt tcctcccaaa acctcaaagg cacgctgctc gacggcttcg
     2461 acggcgacaa ctggtcgata gaaaccgagg gggcagacct taaaatcagc cgcttccgct
     2521 tcgcgtggaa accgtccgaa ctgatgcgcc gcagcctgca cattaccgaa atttccgccg
     2581 gcgacatcgc catcgttacc aaaccgactc cgcctaaaga agaacgcccg ccgctcagcc
     2641 ttcccgacag catagacctg cctgccgccg tctatctcga ccgcttcgag acgggcaaaa
     2701 tcagcatggg caaagccttt gacaaacaaa ccgtctatct cgaacggctg gatgcttcat
     2761 accgttacga ccgcaaagga caccgccttg acctgaaggc cgccgacacg ccgtggagca
     2821 gttcgtcggg gtcagcctcg gtcggcttga aaaaaccgtt tgccctcgat accgccattt
     2881 acaccaaagg cggactcgaa ggcaaaacca tacacagtac ggctcggctg agcggcagcc
     2941 tgaaggatgt gcgcgccgaa ctggcgatcg acggcggcaa tatccgcctc tcgggaaaat
     3001 ccgtcatcca cccgtttgcc gaatcattgg ataaaacatt ggaagaagta ctggtcaaag
     3061 ggttcaacat caatccggcc gccttcgtgc cttccctgcc cgatgccgga ctgaatttcg
     3121 acctgaccgc catcccgtcg ttttcagacg gcatcgcgct ggaaggttcg ctcgatttgg
     3181 aaaacaccaa agccggcttt gccgactgca acggcatccc cgtccgtcag gttttaggcg
     3241 gctttgtcat ccggcaggac ggcacggtgc atatcggcaa tacgtccgcc gccctgctcg
     3301 gacggggcgg catcaggctg tcgggcaaaa tcgacaccga aaaagacatc ctcgatttaa
     3361 atataggcat caactccgtc ggcgcggaag acgtactgca aaccgcgttc aaaggcaggt
     3421 tggacggcag catcggcatc ggtggcacga ccgcctcgcc caaaatctct tggcaactcg
     3481 gcatcggcac ggcgcgcacg gacggcagcc tcgccattgc aagcgacccc gcaaacggac
     3541 agcggaaact ggtgctcgac accgtcaaca tcgccgccgg gcaaggcagc ctgaccgcgc
     3601 aaggctatct cgagctgttt aaagaccgcc tgctcaagct ggacatccgt tcccgcgcat
     3661 tcgacccttc gcgcatcaat ccgcaacttc cggcaggcaa tatcaacggc tcaataaacc
     3721 ttgccggcga actggcaaaa gagaaattca caggcaaaat gcggttttta cccggcacgt
     3781 tcaacggcgt accgattgcc ggcagtgccg acattgttta cgagtcccgc caccttccgc
     3841 gtgccgccgt cgatttgcgg ctggggcgga acatcatcaa aacagacggc ggcttcggca
     3901 aaaaaggcga ccggcttaac ctcaatatca ccgcacccga tttatcccgt ttcggtttcg
     3961 gactcgcggg gtctttaaat gtacgcggac acctttccgg cgatttggac ggcggcatcc
     4021 gaacctttga aaccgacctt tccggcgcgg cgcgcaacct gcacatcggc aaggcggcag
     4081 acatccgttc gctcgatttc accctcaaag gttcgcccga cacaagccgc ccgatacgcg
     4141 ccgacatcaa aggcagccgc ctttcgctgt cgggcggagc ggcggttgtc gataccgccg
     4201 acctgatgct ggacggcacg ggcgtgcagc accgcatccg cacacacgcc gccatgacgc
     4261 tggatggcaa accgttcaaa ttcgatttgg acgcttcagg cggcatcaac agggaactta
     4321 cccgatggaa gggcagcatc ggcatcctcg acatcggcgg cgcattcaac ctcaagctgc
     4381 aaaaccgtat gacgctcgaa gccggtgcgg aacgcgtggc ggcaagtgcg gcaaattggc
     4441 aggcaatggg cggcagcctc aacctgcaac acttttcctg ggacaggaaa accggcatat
     4501 cggtaaaagg cggcgcacgc ggtctgcata tcgccgagtt gcacaatttc ttcaaaccgc
     4561 ccttcgaaca caatctggtt ttaaacggcg actgggatgt cgcctacggg cgcaacgcgc
     4621 gcggctacct caatatcagc cggcaaagcg gcgatgccgt attgcccggc gggcaggctt
     4681 tgggtttgaa cgcattttcc ctgaaaacgc gctttcaaaa cgaccgcatc ggaatcctgc
     4741 ttgacggcgg cgcgcatttc gggcggatta acgccgattt ggacatcggc aacgccttcg
     4801 gcggcaatat ggcaaatgca ccgctcggcg gcaggattac cgcctccctt cccgacttgg
     4861 gcgcattgaa gccctttctg cccgccgccg cgcaaaacat taccggcagc ctgaatgccg
     4921 ccgcgcaaat cggcggacgg gtcggctctc cgtccgtcaa tgtcgccgtc aacggcagca
     4981 gcaactacgg gaaaatcaac ggcaacatca ccgtcgggca aagccgctct ttcgataccg
     5041 cgcctttggg cggcaggctc aacctgaccg ttgccgatgc cgaagtattc cgcaacttcc
     5101 tgcccgtcgg acaaaccgtc aaaggcagcc tgaatgccgc cgtaaccctc ggcggcagca
     5161 tcgccgaccc gcacttgggc ggcagcatca acggcgacaa gctctattac cgcaaccaaa
     5221 cccaaggcat catcttggac aacggttcgc tgcgttcgca tatcgcaggc aggaaatggg
     5281 taatcgacag cctgaaattc cgtcacgaag ggacggcgga actctccggt acggtcggta
     5341 tggaaaacag cggacccgat gtcgatatcg gcgcggtgtt cgacaaatac cgcatcctgt
     5401 cccgccccaa ccgccgcctg acggtttccg gcaacacccg cctgcgctat tcgccgcaaa
     5461 aaggcatatc cgttaccggg atgattaaaa cggatcaggg gctgttcggt tcgcaaaaat
     5521 cctcgatgcc gtccgtcggc gacgatgtcg tcgtattagg cgaagtcaaa aaagaggcgg
     5581 cggcaccgct ccccgtcaat atgaacctga ctttagacct caatgacggc atccgcttcg
     5641 ccggctacgg cgcggacgtt accataggcg gcaaactgac cctgaccgcc caatcgggcg
     5701 gaagcgtgcg gggcgtgggc acggtccgcg tcatcaaagg gcgttataag gcatacgggc
     5761 aggatttgga cattaccaaa ggcacggtct cctttgtcgg cccgctcaac gaccccaacc
     5821 tcaacatccg cgccgaacgc cgcctttccc ccgtcggtgc gggcgtggaa atattgggca
     5881 gcctcaacag cccgcgcatt acgctgacgg caaacgaacc gatgagtgaa aaagacaagc
     5941 tctcttggct catcctcaac cgcgccggca gcggcagcag cggcgacaat gccgccctgt
     6001 ccgcagccgc aggcgcgctg cttgccgggc aaatcaacga ccgcatcggg ctggtggatg
     6061 atttgggctt tacccgcaag cgcagccgca acgcgcaaac cggcgaactc aaccccgccg
     6121 aacaggtgct gaccgtcggc aaacaactga ccggcaaact ctacatcggc tacgaataca
     6181 gcatctccag cgcggaacag tccgtcaaac tgatttaccg gctgacccgc gccatacagg
     6241 cggttgcccg tatcggcagc cgttcgtcgg gcggcgagct gacatacacc atacgtttcg
     6301 accgcttctc cggttcggac aaaaaagact ccgccggaaa cggcaaagga aaataagcgg
     6361 ttttcagacg gcgcgccgcc aaaccggaca tttgaaaacc tgcttttcca ccgtccgccg
     6421 ccgccgtccg cctgcaaggg aacagaatcg atatagtgaa ttaacaaaaa tcaggataag
     6481 gcgacgaagc cgcagacagt acaaatagta cggaaccgat tcactcggtg cttgagcacc
     6541 ttagagaatc gttctctttg agccaaggcg aggcaacgcc gtaccggttt ttgttaatcc
     6601 gctatattcc gccatctcta agatttacag cgatacacag gtaatttaag gaatgcccga
//
LOCUS       DBBZYD010000108         6539 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.108, whole genome shotgun sequence.
ACCESSION   DBBZYD010000108 DBBZYD010000000
VERSION     DBBZYD010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6539
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.108"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(90..1886)
                     /locus_tag="ACJJDL_001825"
     CDS             complement(90..1886)
                     /locus_tag="ACJJDL_001825"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HGG7574490.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVLTTDEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLTAKNIRIEHPDDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTEQCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGTNPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2344..3597
                     /locus_tag="ACJJDL_001826"
     CDS             2344..3597
                     /locus_tag="ACJJDL_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG7574491.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCIISATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3752..5263
                     /gene="lysS"
                     /locus_tag="ACJJDL_001827"
     CDS             3752..5263
                     /gene="lysS"
                     /locus_tag="ACJJDL_001827"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HGG7574492.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHTQYGEIGKEELDPQGIPVKIAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEILDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSGIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5340..5528)
                     /locus_tag="ACJJDL_001828"
                     /pseudo
     CDS             complement(5340..5528)
                     /locus_tag="ACJJDL_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311460.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5532..6410)
                     /locus_tag="ACJJDL_001829"
     CDS             complement(5532..6410)
                     /locus_tag="ACJJDL_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7574493.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLVVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEAFDLPEGSTILGVVLEVKKRF
                     MSAAQARRRVDSDYHP"
     gene            complement(6440..>6539)
                     /locus_tag="ACJJDL_001830"
     CDS             complement(6440..>6539)
                     /locus_tag="ACJJDL_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7574494.1"
                     /translation="IGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1410 a         1698 c         1872 g         1559 t
ORIGIN      
        1 cttgcggcaa gatgaaaacg gtgcgggatg ttttgggaaa ccaatgccgt ctgaagggct
       61 ttcagacggc attttttgcg ccgtgctgtt taacgcgcca gcggttcggt gcgtttgatc
      121 agccacgctt ttgccgcgcc ttcggtcagc ggctcgaggc ggcggcggac ttcggcgtgg
      181 tagcggttga cccagtcgat ttcgccgtcg gtcatgaggg cggtgtccat caggcgggtg
      241 tcgatggggc agagggtcag ggtttcaaaa cagaggaagc tgccgaattc ggtttcttga
      301 ggggcggcga cggcttggtt ggcggcaagg ttttcaatgc ggatgcccca ttttcccggg
      361 cggtagagtc cgggttcgat ggaggtaacc atgccttttt tcatggcggt ttcgggcgtg
      421 gcgggggcgg cgaaggcgat gcgctgcggg ccttcgtgga cgttgaggaa atagcctacg
      481 ccgtgtccgg tgccgtggcc gtagtcgcat tgcgcctgcc acaggggttt gcggcaaatc
      541 gcatcaatca gcggcgaggg gatgttttct gggaacacgg cttcggcaag cgcgatatgg
      601 gctttgagaa cgagggtgtt gtcgcgtttt tgttcggcgg tgggtgtgcc gacagggacg
      661 acgcgggtga tgtcggtcgt gccgcctttg tattgcgcgc cggagtcgat gagcagcagc
      721 ccgttgccgc tgatggtgct gtggctttcg ggcgttgcgc tgtaatgcgg cagggcgccg
      781 ttggcgttga agcctgcgat ggtgtcgaaa ctcaatgaca caaaacccgg gcgcacgctg
      841 cggtggcggt aaagcatggt gtccacgtcg atttcggtca ggctgccgcc gttgccgatg
      901 atgtcttcaa actcggcgaa gaaaccgcac aacgccgcgc cgtcgtgttc catcgcttcg
      961 cggatgcggg cgatgtcggc ttcggatttg caggatttga acagcgtgga cgggttggtg
     1021 ccttcgatta ggcgtacgct ttcgggcagg cgcacgagcg tactgacggc ggttttgttc
     1081 ggttcgataa gcagcgcgcc gccgatttgc gcgagcttgt cggcaacttg ggcgtaaggt
     1141 tcgaccgtga tgccggcggt ttgcagcgcg gcggcggctt cggcgttcag acggcattgt
     1201 tcggtaaaca ggacggcgtt gtctttgcca atcagcagga aggacacgaa aacgggattg
     1261 aaaggcacgt cgctgccgcg caggttggtc agccaagcga tgtcgtcaag cgatgaaacc
     1321 aagtggtaat ccgcgccttt ttccgccatc acggcgcgca cgcgggcgag tttttcggcg
     1381 gcggtttcgg agacgtaggc ggggtcgtgg atgaacacgg tttcggcggg gatagcggga
     1441 cggcttgtcc acacttggtc aagcagatcg tccgggtgtt cgatgcggat gtttttggcg
     1501 gtcagggatt gcgccaaagt gcgtttgccg gtgagcgaga ccatatcgga agggatgccg
     1561 acggcggcgt tttcgggcag gtttgccgcg agccattcgt tatacggcgg cacttgcccg
     1621 cttttttgca gttcgatgcc gctgcccgca agctgcttgg cggcttgttc ccaatagcgg
     1681 ctgtccaccc atacgcccgc ttcatcggtg gtcaggacaa acgtgccgac cgagccggta
     1741 aagcccgata attcgcggcg cgcctgccaa tgctcgggca ggtattcgga caggtggggg
     1801 tcggcggaag ggatgacgag cgcgtccaag ccttgcgcct tcatggcttc gcgcaatgcg
     1861 gacaggtaat tcgatacggt attcataaca gttcctccaa tcgggttttg cggcttcaga
     1921 cggcatggac ggaaatctga aatgccgtct gaaaaacata accatcttat caaatcgcca
     1981 gcctgctgca aaacggacgg gctgatcgga tggtgcgtgt ttgcgcgaaa aaagcgatgt
     2041 aaggttgttt gttgtaaaat tttaggcata aaatgtcgtt ttatgccttt ttttggaagt
     2101 aatatggaaa atatagtcaa gtttgagcat gaagttctaa tagtgtgtgt tggcaggtat
     2161 ttggattacg ttacaatacg tgttttcatc aaaatttccc taccgagcgg tatcctgttt
     2221 ttgaagacgg taggatttgg gtttgtttgg gggcaatccc gcccaaattg gagcaataga
     2281 tagggctgtg tccgaatatg cggctctgtg tgttgaaaca cagttaaaaa tacggaagac
     2341 tttatgtccg aacaacatat ttcgacttgg aaaagtaaaa tcaacgcatt gggtccgggg
     2401 atcatgatgg cttcggcggc ggtcggcggt tcgcacctga ttgcctcgac gcaggcgggc
     2461 gcgctttacg gctggcagat cgcgctcatc atcatcctga ccaacctctt caaatacccg
     2521 tttttccgct tcagcgcgca ttacacgctg gacacgggca agagcctgat tgaaggttat
     2581 gccgagaaaa gccgtgttta tttgtgggtt ttcctgattt tgtgcatcat ttccgccacg
     2641 attaacgctg gcgcggtcgc catcgtaacc gccgccatcg tcaaaatggc gattccctcg
     2701 ctgatgtttg atgccggcac ggttgccgcc ttgattatgg catcctgcct gattattttg
     2761 gtgagcggac gttaccgcgc tttggatcgc gtttccaaaa tcatcatcgt tactttgagt
     2821 atcgccacgc ttgccgccgc cggcatcgct atgtcgcgcg gtatgcagat gcagccggac
     2881 tttatcgagc cgacaccgtg gacgcttgcc ggtttgggct tcctgatcgc gctgatgggc
     2941 tggatgcccg cgccgattga aatttccgcc atcaattctt tgtgggtaac cgaaaaacaa
     3001 cgcatcaatc cttccgaata ccgcgacggg atttttgatt tcaacgtcgg ttatatcgcc
     3061 agtgcggttt tggctttggt tttccttgca ctgggcgcgt ttgtgcaata cggcaacggc
     3121 gaagcagtgc agatggcggg cggcaaatat atcgggcaat tgatcaatat gtacgccgtt
     3181 accatcggcg gctggtcgcg cccgctggtg gcgtttatcg cttttgcctg catgtacggc
     3241 acgacgatta ccgttgtgga cggctatgcc cgtgccattg ccgaacccgt gcgcctgctg
     3301 cgcggaaaag acaaaacggg caacgccgaa ttctttgcct ggaatatttg ggtggcgggc
     3361 agcggtttgg cggtgatttt ttggtttgac ggcgtaatgg cgaatctgct caaatttgcg
     3421 atgattgccg cttttgtgtc cgcccctgtg tttgcctggc tgaattaccg tttggtcaaa
     3481 ggtgatgaaa aacacaaact cacatcaggt atgaatgccc ttgcattggc aggcttgatt
     3541 tatctgaccg gctttaccgt tttgttccta ttgaatttgg cgggaatgtt caaatgataa
     3601 cgatgccgtc tgaaaccgca aaccgctttc agacggcatt gccgcgttta tggaaaaaaa
     3661 caccgacatc gcgtaaaata tgcgcaaatt ttgtgattcg gtcaggtcgt ctgaaacaga
     3721 ttgcgcctga tttatttttt cggaaaaccc tatgagcgaa caaaaccatc cgcaaaccga
     3781 gccgcagttg gacgaaaacc aaatcatcgc cctgcgccgc gaaaaactgc acaacatccg
     3841 ccaacagcgc aacgcctacc ctaacgattt caaacgcgac agctttgccg ccgacctgca
     3901 tacccaatac ggtgaaatcg gcaaagaaga actcgacccg caaggcattc ccgtcaaaat
     3961 tgccggccgc atgatgctca aacggcaaat gggcaaggcg agctttgcca ccattcaaga
     4021 cgtgtccggg caaatccagc tttatctgaa caacaaaggc gtgagccaag aaattttgga
     4081 cgacttcaac cattgggact tgggcgacat cgtcggtgcg gaaggcactt tgttcaaaac
     4141 caaccacggc gaactgaccg tacgcgtgtc cggcatccgc ctgctgtcca aatccctgcg
     4201 tccgctgccc gacaaacaca aaggtttgag cgatcaggaa accaaatacc gccaacgcta
     4261 tgttgatttg attgccaacg gagaatcgcg caataccttc atcaaacgca gccaaatcat
     4321 ccaatccgtg cgtaatttta tggtgggcga gcattatctc gaagtcgaaa ccccgatgat
     4381 gcacccgatt cccggcggcg cgacggcaaa acccttcgtt acccaccaca atgccttgga
     4441 cattccgctc tacctgcgca tcgcccccga gctgtatctg aaacgcttgg ttgtcggcgg
     4501 tttggagcgc gtgtttgaaa tcaatcgcag cttccgcaac gaaggtatgt ccgtgcgcca
     4561 caatcccgaa ttcaccatga tcgaattcta cgaagccttc tccgactacg aacgtatgat
     4621 gcagatggca gaagacatca tccgcaacgc atcgcgcaca gtaaacggta cggcaaacat
     4681 cacttacaat ggcaaagaag tcgatttgga aagcccgttc gagcgtctga ccatcctcga
     4741 agccatcaaa aaatacaatc cgcactacac cgacgagcag ttgaacgatg cggaatggct
     4801 gaaaaaagaa atcgtcaaac acggtgaaag cctgccgccg tccccgggca tcggcagcct
     4861 gcaactcgcg ctgtttgaag gttgcgccga gggcaagctg tggaacccga ccttcatcat
     4921 cgattacccg gtcgaagttt ccccgttggc gcgcgcttcg gataccaaac aaggtctgac
     4981 cgaacgtttc gaattgttcg ttgtcggccg cgaactggca aacggctatt cagaattgaa
     5041 tgaccctgaa gaccaagccg aacgcttcaa atcgcaagtc gcacaaaaag acgcgggcga
     5101 cgacgaagcc atgcattacg atgccgacta catccgcgcg atggaatttg gtttgccgcc
     5161 gaccggcggt tgcggcatcg gtatcgaccg cttggtgatg ttgctgaccg attcgcaaac
     5221 catccgcgat gtgattctgt ttccgcagat gcgccccgag tagtcataaa aacagttgaa
     5281 atggcaatgc cgtctgaacc cgattggatt cagacggcat tttgtatggc ggtacggatt
     5341 tattcgcttt ctaactgacc gacccattcg gacaaggcag tcaggcgttg ttcggatttc
     5401 gccacgaacg ggttttcggt atcccacgcg tagcctgcca aaatcgaaga aagcatacgg
     5461 ctgatttccg ggctgcggtc gggcgcgtac acgacgtttt ggaagcggaa atcgtaccaa
     5521 ccgtccacac atcaggggtg gtaatccgaa tcaacacgcc ttctcgcctg tgcggcggac
     5581 ataaaccgtt ttttgacctc cagcaccaca cctaaaatcg tgctgccttc gggcaggtca
     5641 aaggcttcag acggcctgcc cgtctgataa atcagcatcc tgcccgcaat atcgataaca
     5701 aggtgcgcga cgaccagccg cttgtcggac agttcaatca gcacgatgtc ctcgtccgca
     5761 gggcgcatac gcggctcgac caccaccaaa tccccttttt cgataaccgg cgacatggac
     5821 gtgtcgggca tggcaacggc aaacgtgtac tgcgaggggg cgaccaccga agcaaacaag
     5881 tcgaaactgc ctgtgagttt gcctgtacgg gcgaaagccg ccgcctgacg gtctgacaac
     5941 agggggcgtg gtgtgagcct catcgacagt gctttgccgt cggcatcgct gtggttgtgc
     6001 gtatgcgtat gatggttgtt gatggtcgta tcgccttgga catcgttaag gactatgctg
     6061 tttgaacctg ccacggattt ggtcatctca ttgtaggctt gcgtcgtgat gcgctcttgc
     6121 ttggtcatac ctgttacagc ctgtttcagc atttctaacg ctatgtgatt cttcctaagg
     6181 gtcgctatac cggcttttgc agcttgctca ttaccacaag aggggcaacc ccagctactt
     6241 cctatgaaca tattggagta cctcgaacag gtttggtttc catgtttagg gcagttgatt
     6301 acacacggct tggctgtacc ctcaaactcg accaacttaa tgccacgatg accgaaacgt
     6361 tcctcaacct cagcagcagc ttcttcaaat gtttttgacc ttcttgccat attgacctcc
     6421 ggattattga ttattttggc tatgctttaa cgagggattg gaatgaggta aagctgttgc
     6481 cctctccccg caatagttcc attaggcgcg gatgaatgaa tagtttgtcc ctgccgatg
//
LOCUS       DBBZYD010000109         6387 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.109, whole genome shotgun sequence.
ACCESSION   DBBZYD010000109 DBBZYD010000000
VERSION     DBBZYD010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6387
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.109"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            456..902
                     /gene="yciA"
                     /locus_tag="ACJJDL_001831"
     CDS             456..902
                     /gene="yciA"
                     /locus_tag="ACJJDL_001831"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HGG7574495.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKIEVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLSGLLPTP"
     gene            complement(953..1774)
                     /locus_tag="ACJJDL_001832"
     CDS             complement(953..1774)
                     /locus_tag="ACJJDL_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7574496.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQVLADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGDTEFSNVRFKGDDERAAGVYESVEFIRPEDIAETSLW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1893..2351
                     /locus_tag="ACJJDL_001833"
     CDS             1893..2351
                     /locus_tag="ACJJDL_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7574497.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2515..3630)
                     /gene="lst"
                     /locus_tag="ACJJDL_001834"
     CDS             complement(2515..3630)
                     /gene="lst"
                     /locus_tag="ACJJDL_001834"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HGG7574498.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTGNLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPKDYWLKPVYALFTQSGIPILTFDDKD"
     gene            3857..3997
                     /locus_tag="ACJJDL_001835"
     CDS             3857..3997
                     /locus_tag="ACJJDL_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/arginine repetitive matrix 2"
                     /protein_id="HGG7574499.1"
                     /translation="MPPHIRHSTSDTAAKSGKTISPFLSRRRVQTRQDRTKREQSRQN
                     MP"
     gene            4064..6289
                     /locus_tag="ACJJDL_001836"
     CDS             4064..6289
                     /locus_tag="ACJJDL_001836"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HGG7574500.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKDGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAADIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT         1694 a         1867 c         1441 g         1385 t
ORIGIN      
        1 aaacccgtca ttcccgcgca ggtgggaatc cagaccccct gacgcggcgg gaatctatcg
       61 gaaatgactg aaaccccgag attctagatt cccactttcg tgggaatgac gtggtgcagg
      121 tttccgtatg gatggattcg tcattcccgc gcaggcggga atccagaccc ctgacgcggc
      181 gggaatctat cggaaatgac tgaaaccccg agattctaga ttcccgcctg cgcgggaatg
      241 acggttcagt tgcttagggt aggatttggc gggattggtg ggctgaagcc caccctacgg
      301 ccccgcccta cgcatccgcc ctacaatgcg ccttgcgaat ctgccctacg cccgcccttg
      361 tatgtctcaa atgggttaaa ctacgcactt cccgacttcc cgtttcaggc aggggtgcag
      421 gtccgattta tatttcaata aaacaaggaa actttatgca gcacgaagaa ggcaaccgcc
      481 aacgccctca aggcgaactg ctcctgcgta ccgtcgctat gccgcgcgat accaatccca
      541 accaagacat tttcggcggc tggattatgt cgcagatgga tttgggcggc ggcatattgg
      601 cggcggaaat cgcgcgggga cgcatcgtta ccgtcgccgt tcaggaaatg aactttatcc
      661 gcccggtcaa ggtcggcaac gtcgtctgct gctacgggca ttgcgtccgc gtgggcaata
      721 cttccctcca gcttaaaatc gaagtctggg tgaaaacttt gatgaacgat tgcgttaccg
      781 aagaccgcta cctcgtaacc gaggcggtgt tcacttatgt tgccatcgat gcggaaggca
      841 atccgcgccc gattccgaaa gaaggcaacc ccaaattgtc gggcttattg cctactccgt
      901 aaaaataccc gtaaaaatgc cgtctgaaac tgtcttcaga cggcattccg catcatttga
      961 accaggacct gatgcgggaa aacagcgaca tactctgttt ttcaaagtct tcccgcactt
     1021 cgggcacggc tttttttatc actttcattc ctgcaaaagt ctgcgccacg ggcataattt
     1081 caatcgtgtt cacattcata tgcgccggcc ggcggtacag ccacaatgag gtttccgcaa
     1141 tatcttcggg gcggataaat tccacactct catacacgcc cgccgccctc tcgtcatcgc
     1201 ctttgaagcg cacgttggaa aactccgtat cgccgcacaa acccggctcg atattggtaa
     1261 cgcggatatt tttatccgcc aactccgcgc gcaaattcag gctgaactgg cgcacaaacg
     1321 ccttggtcgc cccgtaaacg ttgctgccgg cataagcata attacccgca atcgaaccca
     1381 aattcatcac ataaccgccg ccgcgttcca ccatttgcgg caaaatcttg cgcgtcagga
     1441 acgtcaaacc caaaacattg gtttgaatca ttgtttccca atcttcaaaa tccgccttgt
     1501 ccgccgtgtc caaacccaaa gccagcccgg cattgttgat gaggcagtcg atgtcggaaa
     1561 attcatcggg gatgccgttt aaggcatttt ccaccgactc gcgtcgcgac acgtccattt
     1621 ccaaagggta aaacaaagca cccaattcat ccgccaaaac ctgaagcctg tccgcacggc
     1681 gcgccgcacc gataacgcgg tatccagccc cgacaaacgc gcggcacatc gcttcgccga
     1741 atcctgccga agcaccggta attaaaacag ccattgtttt tcctttcttt ctcgtttccc
     1801 aaacctgttt caggtatcat aacacccttc agacggcatc gcgccgactg aaaatgacaa
     1861 caaccatacc accacgacag gacacattca atatgaaaac ccaaatcagc cttgctgctg
     1921 ccgccatcac actgctcctt tccgcctgcg gaggcagcgg aataccttcc caacccaaag
     1981 gcgaaatttc cgaaaaccgc accgccgcgt tcaaatctat gatgcccgac ttctcgcgta
     2041 tgggcaaaat ggtcaaaggc gaagagcctt acgatgtcga aaaattcaaa caggctgccg
     2101 cggcgtttgc cgaaagcagc aagaaaccgt tcacactttt tgagtccgat ccgcaaggca
     2161 acggccgcgc cctgccagcc gtttggtcgg atggtgcaaa atttgaagcc gaaaaaacaa
     2221 aattcgccgc cgccgtcgaa aaactcaatg ccgcagcaca aaccggcaaa ctggatgaaa
     2281 tcaaagccgc ctacggcgaa accggcgcaa gctgcaaatc ctgccacgac agtttccgcg
     2341 cacccgaata acatccgaaa cagaacaatg ccgtctgaag ccttcagacg gcattttctt
     2401 tgccatttca gcacacgcaa agcaatcaga aattatcgtc aattcaaaaa atacgccata
     2461 tcctgatttt tgccttactt actccgccat tttctatttt gatttgctat gcgattaatc
     2521 tttatcgtca aatgtcaaaa tcgggatgcc ggattgggta aacagggcat acaccggctt
     2581 gagccaataa tctttcggaa gggaagccgg tttcaatgcg taaacgtgca cattgggaaa
     2641 atccttcatc gtcaacgccg cgccgctgaa aaaggtataa atttcatacc tcgtatgcgg
     2701 gtttttctta atctcgcgca aaatatagtc ttcgatgaca tagggcgaat ttaatgtggt
     2761 tacgccggaa agcccgtagg tttggcgggg gtgcggtgcg acatattgta tgttgaagtt
     2821 ttttgccgcc ttttccgaaa tttccttcat ctccttgtcg ggcgaaccca aaagtatccg
     2881 caccgtgccg cccgtttcat cccccgcttt cagttcggac gcatcgaaca gcggcaggta
     2941 agtcatcttg cggcggccgt cgtccataat gtttttcaaa cccttgaata tcgtgtaatg
     3001 ctcgtcggaa gcattacggg ttttggcgat actccaatct ccgatcatca tccgggcaaa
     3061 attccgcttg atcgtcccgt ttacagaaaa ctcatcgccc aaatagctgc tgctttgaat
     3121 taaattgcct gtcccgtcgt caaaggtttt gatttccgca tccgggtaag tgctcaaaaa
     3181 ggcggcaatg ctgacttttt ccaaacttgc caaataaatc cgcttgacct tcggcagcag
     3241 cattgccttc accttcagct ccgccatcgt cggaatgaaa ttaaacgatt tgttcaaacc
     3301 gtagggcagg tggaaaaaat acgcccgctc cgccttatcc tttatctgat tgaaataata
     3361 atcgtatttt tcattcctgt tttcagacat cagcaccaca taaaaccgct cccccggatg
     3421 ctgcgccata atcctttccg ccaccttcat ctgcaatatg gtatagcaga aaatcagatt
     3481 gaccggttcc ccctcttcat tgaagagttt gtccttcagc agggaaaccg cattcctttc
     3541 cccctgattt acccggtcaa atgtataaaa tatcccgaaa caaaaaacaa tcagacacaa
     3601 cacggtcaaa caagcctttt tcaagcccat atccctaaaa ctccattccg acaaattaaa
     3661 catacgcccc gagtgtcccg ggcggaaaaa tgcggaattt tagcagatat tccgacagtt
     3721 accgaatatt atagtggttt aaatttaaat caggacaagg cgacgaagcc gcagacagta
     3781 caagcagtac gacaaggcga ggcaacgctg tactggttta aatttaaacc actataaaat
     3841 caatttcacc gaaaatatgc cgccgcacat caggcacagc acctccgaca ccgccgccaa
     3901 aagcgggaaa accatttccc ccttcctttc acgccgccgc gttcaaacac gccaagatcg
     3961 aacaaagcgc gaacaaagcc gccaaaatat gccataatag ccacgcacat tccccgcgca
     4021 atgtgttcca aaagaaaaaa ccaacctaca agagaataat cctatgactc aaaaatccac
     4081 cattgtttat acccataccg acgaagcccc cgcgctggcg acccaatcgc tgctgccgat
     4141 tgtgcaggct tttgcccgcc acgccgatat tgatgtcaaa actgccgaca tttccctgtc
     4201 cggccgtatt ttggcggcat tccccgaata tctgaccgag gcgcagcgcg tacccgacgc
     4261 gcttgccgaa ttgggcgaac tggtaaaaca acccgatgca aacgtaatca aactgccgaa
     4321 catcagcgca tccgtacctc aactgaccgc cgcgattaaa gaattgcagt ctaaaggctt
     4381 tgccgttcct gactatcctg ccgaccctca aaccgatgaa gaaaaagccg tacgcgaacg
     4441 ctacgaccgc atcaaaggca gcgcggtaaa ccctgtcctg cgtgaaggca actccgaccg
     4501 tcgcgccccc aaagcggtga aaaactttgc caaaaaaaat ccgcacagca tgggcgcatg
     4561 gacaaaagac tccaaaaccc acgttgccac catgcaaagc ggcgactttt tccataacga
     4621 acaatccgtt accgtacctg aagcgacttc cgtatccatc gtgttcaccg acaaacaagg
     4681 caataaaaaa gagctgcgcg cgcctgttgc cctgaaagcc ggcgaaatca tcgacgcaac
     4741 cgtgatgagc aaaaaagccc tgctcgcctt ccttgccgaa caagtgaaag acgcgaaggc
     4801 aaaaggcgta ttgttctcac tgcatatgaa agccacgatg atgaaagtgt ccgacccgat
     4861 tatcttcgga cacgccgtca aagtgttctt cgcgcctgta tttgaaaaat tcggcggcaa
     4921 actggctgcc gcaggtgtca acgtcaacaa cggcttcggc aacctgctgg ccaatctgga
     4981 caaactggat gcggacaccc gcgccgccgt cgaagctgaa atcgccgccg tttacgccgc
     5041 caaccctgat ttggcgatgg ttgattccga taaaggcatt accaacctgc acgttcccag
     5101 cgatgtcatc gttgatgctt ctatgcctgc gatgattcgt aactccggcc gtatgtggga
     5161 taaagacggc aaagcgcaag acaccaaagc cgtcattccg gacagcagct atgccggtgt
     5221 ttaccaagca accatcgact tctgccgcga acacggcgca ttcgatccga caacaatggg
     5281 tactgtgccc aatgtcggtt tgatggcgca agcggcggaa gaatacggct cacacaacaa
     5341 aacctttgaa atcgaagccg acggccaagt ccaagtcatt gatgcggcag gaaaagtcct
     5401 gatgcagcat gacgttgaag caggcgacat ttggcgtatg tgccaaacca aagacgctcc
     5461 ggttaaagac tgggtgcaac ttgccgtcaa ccgcgcccgt ctgagcaaca cgcctgccgt
     5521 gttctggctc gacgaaaacc gtccgcacga caagagcctg ctcgccaagg ttaaagccta
     5581 ccttgccgaa ctggatacca atggcctcga catccgcgtc ctcgctcctg aagaagccgc
     5641 caagttcagc ttgggtcgtc tgaaaaacgg cgaagatact atctccgtaa ccggtaacgt
     5701 cctgcgcgac tacctgaccg acttgttccc gattttggaa ctcggcacaa gcgcgaaaat
     5761 gctgtctatc gttccattga tgaacggcgg cggtatgttt gaaaccggcg cgggcggttc
     5821 tgcaccgaaa catgttcaac aattcctcga agaaaaccac ctgcgttggg actctttggg
     5881 cgaatttctc gcactcgccg tatcgtttga acatctggcg caaaaaaccg gcaacaccaa
     5941 agcccaagtc ctcgccgaca ctttggatgc agccaccgaa aaactgctgt tgaacgacaa
     6001 atcgcctaaa cgtaaagccg gcgaactcga caaccgcggc agccatttct acctcaccct
     6061 ctactgggcg caagaattgg cggcgcaaga caaagatgcc gaactgaaag ccgcatttac
     6121 gccattggca gccgctttga ccgccgacga agcgaaaatc gttgccgagc tttccgccgt
     6181 acaaggcaaa gcggccgaca tcggcggcta ctacgccgcc aatcctgaaa aagccgcaca
     6241 agtgatgcgt ccgagcgtaa cctttaatca ggcactaaac gccttataag cacaaaggta
     6301 aaaatgccgt ctgaacattc gtcgttcaga cggcattagt tatccctatc tgcctgatta
     6361 tgattaaacg ccgcacccat tggatat
//
LOCUS       DBBZYD010000110         6199 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.110, whole genome shotgun sequence.
ACCESSION   DBBZYD010000110 DBBZYD010000000
VERSION     DBBZYD010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6199
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.110"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            57..1610
                     /locus_tag="ACJJDL_001837"
     CDS             57..1610
                     /locus_tag="ACJJDL_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HGG7574501.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASVGLSKELAGLKAQTPIEKIIWTGKSRPVSETAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQTLLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(1701..3728)
                     /locus_tag="ACJJDL_001838"
     CDS             complement(1701..3728)
                     /locus_tag="ACJJDL_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HGG7574502.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPNQVQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVHLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            4017..6023
                     /locus_tag="ACJJDL_001839"
     CDS             4017..6023
                     /locus_tag="ACJJDL_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HGG7574503.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
BASE COUNT         1599 a         1873 c         1439 g         1288 t
ORIGIN      
        1 cggcatattg ttttcaaatg agggcgttcg ccgtccgcaa ccataaagga agtttcatga
       61 accggactta tgccaatttc tacgaaatgc tcgccgccgc ctgccgcaaa aacggcaacg
      121 gcacggcagt gttcgacggc aaggaaaaaa ccgcctaccg cgcgctcaag caggaggccg
      181 aagccgttgc ggcgtatctg caaaatatcg gcgtgaagtt cggcgacacg gtcgcgctgg
      241 cggtttccaa ttccacagaa tttattaccg cctatttcgc catctccgcc atcggcgcgg
      301 tcgccgtacc gatgaacaca tttttgaaaa acagcgaata cgcgtatatc ctgaacgact
      361 gcaaggcgcg cttcctgttc gcctcggtcg gcctgtcaaa agaattggcg ggcttgaagg
      421 cgcaaacgcc catcgaaaaa atcatttgga cgggcaaaag ccggccggtc agcgaaacgg
      481 cggaaggcga tgcctttttt gaagacgtgc gccgcttccc cgaaaaaccc gacttgggcc
      541 gacaaccccg gataaatgat ttggcacaca tcatctacac ctccggcacg acggggcatc
      601 ccaaaggcgc gctaatcagt tacgccaacc tgttcgccaa cctgaacggc atcgaacgca
      661 tctttaaaat ttccaaacgc gaccgcttta tcgttttcct gccgatgttc cacagcttca
      721 cgctgacggc tatggtgctg ctgccgattt atatggcgtg ttcgattatt ttggtcaaat
      781 ccgttttccc gttttccaat gttttgaaac agaccctgct caaacgcgcg accgtgtttt
      841 tgggcatacc cgcgatttac accgcgatga gcaaggcgaa aatcccttgg tatttcagat
      901 ggttcaaccg cattcgcctg tttatcagcg gcggcgcgcc tttggcggaa caaaccatcc
      961 tcgatttcaa agccaagttc ccccgcgcca aattgctgga aggctacgga ctgagcgaag
     1021 cctctcccgt cgtcgccgtc aatacgcccg agaggcaaaa agcccgcagc gtcggcatcc
     1081 ccctgcccgg tttggaagcc aaagccgtcg atgaagaatt ggtcgaagtg ccgcgcggcg
     1141 aagtgggcga actgattgtc aggggcggtt cggtgatgcg gggctacctc aatatgcctg
     1201 ccgccaccga tgaaaccatc gtcaacggct ggttgaaaac gggcgatttc gttaccatag
     1261 acgaagacgg cttcatcttt atcgtcgacc gcaaaaaaga tttgattatt tccaaaggtc
     1321 aaaatgtcta tccgcgcgag atcgaagagg aaatctacaa actcgatgcc gtcgaagccg
     1381 ccgccgtcat cggcgtgaaa gaccgttatg ccgacgagga aatcgtcgcc ttcgtccaat
     1441 tgaaggaagg tatggatttg ggcgagaacg aaatccgccg ccacctgcgt accgtgctgg
     1501 caaatttcaa aatccccaaa caaatccact ttaaagacgg gctgccgcgc aacgctacgg
     1561 gcaaggtatt gaaacgggtg ttgaaggagc agtttgacgg aaacaaatga acgccgtgcc
     1621 gtccgaagcc ccgtccggca aaaaaaatgc ggtgaatctg cttcaccgca tttttttggc
     1681 aaacgccgga gcgaggatat ttactctgcc aattccacct gctcgtgcgc catcagttcc
     1741 tgaccgacat catccaacaa catcaaataa cgttcgtagt ttttcaaaat gtcggcaatc
     1801 agctcgtcct tgttcatata ctgcacatcg tacccgacgc gcccgtcgaa aaaataagcg
     1861 tagggtttgt aagttgtctg atgccggata tgcggcagct tgccgtcgtt aatcaactgg
     1921 tcggatacat cctgcccgac agacttaatc ccgtacataa aatcgcgcat cgtctctttc
     1981 cgaatgacga actcgattgc gggctcgtcc tgatgaaaca tcttatcgac ccggacgctc
     2041 aagccgtatt cttccgaaag ctcccgttgc aactcgtgca tagcgggcga tgcggtatgt
     2101 ttgaggaatt ttaaaatatc ctgctcctgc gtctggctca ttatctgcac cagccgttct
     2161 ttccacttgc cgcccgtcca aaatacactg gtagggttaa cccgggtctc aaaatatttc
     2221 ttatccgcac tcaatccttt ccacaggctg aaacacatta tcagcatcag cagggcaaac
     2281 ggcagggaaa caatcagggt catagactgc aggttgccga gtccgcccga gcgcatcagc
     2341 aaaacggcaa cggcagacat cagcacgccc cacataaccg cctgccaccg tggcgcgctc
     2401 aagcctttgt cccgagaggt aatattgttc aggacataaa tcccggaatc ggcagaagtt
     2461 acaaaaaaca gagaaatgac cagcaggctg acgatgctcg tcaattcggg cagggggagg
     2521 taattaaaga atttaaaaag cagcgtttcc ggagaggagg tcatcttttc gagcattccc
     2581 cccgcaaccc cgtcattcag ccaaatcgcc gtattgccga agacggtaaa ccacaaaacg
     2641 ccgaacaggc cggggatgag caaaaccccg aagacaaact cgcggatggt gcgccccttt
     2701 gaaatgcgcg cgataaacaa acccacaaac ggcgcccaag aacaccacca cgcccaataa
     2761 agcaccgtcc aagattcaaa ccacggcttg tgttcccgtt cgtacgcata agttttaaaa
     2821 ctgaggtgca ccagatttcc gaggtagttc cctatgttgt cgccgaatgc cgacaacagg
     2881 taaacagtgg gacccgccgc caaaacaaaa aacagcagca aaaacgcaag gctcaggttc
     2941 aactcgctca acaccttcac gcccttcccc acgccggata ttgccgaaac gacggcgagg
     3001 gacatgacgg cggcgataat caaaacctgc acgctgaagc tgttttcggc aatccagccc
     3061 atttcctgca atccggcgcc cagttgcgaa gccccgaacc ccaatgtggt gatgatgccg
     3121 aaaaaagtag caagcaacgc cataatatca atggcatcgc cgaaccttcc ggaaattttt
     3181 tctttcaaca ggggataaaa acaagaacgc agggcaagcg gcagcttgta gcggaaaccg
     3241 aaataagcca aagccaatgc aatcgtaccg tacaccgacc aagcgtgaac gccccaatgg
     3301 aacaccgtgt gcagcaatgc ctgctgctgc ctgtgttccg gcgtgccggc cgtaatgtcc
     3361 gaaaaataat gcatcaacgg ctctgccacg ccgaaaaaca tcagacccac gcccatcccg
     3421 gccgcaaaca gcatcgccag ccacgacagg aagccgaatt ccggcacatc ttcatcccgt
     3481 ccgagcctga tgtttcccaa actgctgacc gagagtatca gcaggaaacc cagaaaaatg
     3541 gaaaacgtta aaacataaaa ccagctgaac tcggtaaaaa tgacttcttt tgcccgatcg
     3601 agccacatct gcacctgatt cggcacggtt aaaaccaata ccaccaaaac acacacaaaa
     3661 aacaaagtcg tcaaaataac catcggatta aatgacgttc ggcgttctat aaattcagac
     3721 agggacaaac cttctcactc ctttgttaaa aacagacaaa cccggtcatc gggcaaagcg
     3781 gtcaaaacct gccggtaaaa taccggcttc cggatgacga aatgcacaaa ccggccgaaa
     3841 ttgttataat cgaaaaaatt aaaaatcaat acggattatt ctatcagatt gatttatcga
     3901 tatttattat atcattaata tagtttgatt tcaaaccggc ggaaaatgcg ccgcccaccg
     3961 caggcgcgcc ctccccgcta tcggggcgtt taacgccgga ttgccgatgc ggtacaatgg
     4021 ctgatatgaa gaaaattacc cctcaaaacc tgcgccccct gctttcggaa agcttgggac
     4081 ataccgattt tgtcaacgtc ctcaacgcac tgattaaatt tttgcgccgt ggcggcaaaa
     4141 aatgtgcggg ggaacgtttc gacctgatta tcgacacatt caaacaagac agggaattac
     4201 tgtcccgctt cagccggtgt ttttacatct ggctcgcgca aatacacatt tatccggcac
     4261 tcatcaaact cggcatcttc tcgcgccaca gctttgcccg ggaaatgggc atacgcatct
     4321 acgaacgctt cagcccgtca tataaagatt ttgccaactt gggcgaagtc ttcctttatc
     4381 ttttccattc cgaaaacgac gacaaatggc tgcaaacgct caatatccgc caatggctgg
     4441 ttttatacga actcatccgg agccacgccg agccgtccaa attgcagacg gcgggcatcc
     4501 gccttgccga tgcgcgtttg cgcgccatcg aaatgctgtc tgtctggacg gcatccgaag
     4561 ccatcgaacc cgacctcatc cgcatcgccc cgcgcctgct ggaagccgat tcttccttcg
     4621 tcgccctcca acgcgaaacc gccaaactgg tcgaacacta ccgcaacggc accacgcctt
     4681 acgacaccgc ccacctcgaa gtgatgttcg accaatgttt cagccagatt gactatttgc
     4741 gccgcaaagg gacgggcgcc ggctccggtt cgtcggtcaa agtcgcccac ctgctcgaac
     4801 ggctccggca gaccgtagac cgtctaaagc tgctcaccga catccaaacc ggtgccggca
     4861 acagcaaccg cctgaccatc gcgctgatga actccctcat ctacgcggcg gtcgaacaat
     4921 acagcacccg ccacctgcgc cgcagcagca tccgtatgct cgcccgcagc attaccgaaa
     4981 acaaaagcca ccacggcgaa cactacatca cccgcaaccg caaagaatat ttcaaaatgt
     5041 tctactcggc ggcaggcggc ggcatcatca tcgccctgat ggcgctgctc aaaatccgca
     5101 tcggcacact cggcctcagc cccttcctga cttccttgtc ggctgggttc aactacggca
     5161 tcggctttat gatcatccat atgctgcact gcaccgtcgc caccaaacag cccgcgatga
     5221 ctgccgccag ctttgccgaa caggtcgatc tcaacgaagg cggcaaagcg gtggacaaca
     5281 aactcgccaa gctcctcatc gacgtatgcc gttcccaaag tgtcgccgtt ttcggcaacg
     5341 tttccatcgc catccttttg gcgtgcgcca tatcgttcgg ctatgcccat ctgtaccggc
     5401 agcccatact cgatgcccac accgccgcct accagttcaa atccatagac atcatcgctt
     5461 acccgacgct gtggtatgcc gccattgcag gtctgtggct gttctgctcc ggcatcatcg
     5521 caggtttttt cgacaaccgc gccgactacc tcaacctgcg ccaacgcctg cccttcaacc
     5581 ccttgctgcg taaaatcatg cgccccgggc cccgccgcgt cctcgccgcc tacatccaca
     5641 aacactacgg ctcgttggca ggcaacttca tcttcgggat gctcttgggt atgaccggct
     5701 atttcggaca cctcctcggg ctgccgctgg acatccgcca cgtcgccttt tcctccgcca
     5761 acctcggcta tgccgccgtc agcggcaacg tcggtttggg cacgttcgta ctcggcattt
     5821 tcagcgtcct cgccatcggc ctggtcaacc tctgcgtcag cttcagcctc gccctcttcg
     5881 tcgccctgcg ctcgcgcggc acgaaaatcg gcagcatccg caatctgatt aagagttttt
     5941 ggaatcagat taaaagcaat ccctgcatac ttttcctccc gcccgccaaa gaacagggac
     6001 atcctccttc ggacaagcct tgaccggcaa tgccgtctga agcgggattc gccccgaata
     6061 ccgccctgat gcgggaaatc cccataaaag gatgagacct ttgcaaaaat agtctgttaa
     6121 cgaaatttga cgcataaaaa tgcgccaaaa aattttcaat tgcctaaaac cttcctaata
     6181 ttgagcaaaa agtaggaaa
//
LOCUS       DBBZYD010000111         6139 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.111, whole genome shotgun sequence.
ACCESSION   DBBZYD010000111 DBBZYD010000000
VERSION     DBBZYD010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6139
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.111"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(218..3049)
                     /gene="lbpA"
                     /locus_tag="ACJJDL_001840"
                     /gene_synonym="tbpA"
     CDS             complement(218..3049)
                     /gene="lbpA"
                     /locus_tag="ACJJDL_001840"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HGG7574504.1"
                     /translation="MNKKHGFQLTLTALAIATAFPSYAANPETAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTYDIQREKTEPFFSVEGERESK
                     PVAKLAGYGKYLNNQLNRWVKERIEKNQPLSAEEEAQVREAQARHENLSAQAYTGGGR
                     ILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEADKFR
                     DKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVRGIGLKYSRTKFIDEHHRRRRMGLLYR
                     YENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSSD
                     RFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAISRPEQLSHNAARISESTG
                     FDDKNQDKYLLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFD
                     FSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSVSYRASSGFRTPSFQE
                     LFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADH
                     KTKLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNRI
                     KPKSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAY
                     LAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAES
                     TANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(3046..5280)
                     /locus_tag="ACJJDL_001841"
     CDS             complement(3046..5280)
                     /locus_tag="ACJJDL_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7574505.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAPTLSDSKS
                     SNPADKPAPAPAEPSVEITPVNRPAVGAAMRLPRRNTAFHREDGTVIPDSKQAEEQLS
                     FKEGDVLFLYGSKENKLQQLKSEIHKRDPDVEIRTSENENKKYDYKFVDAGYVYVKGK
                     DEIKWTSDHKQFSNRLGYDGFVYYSGERPSQSLPSAGTVEYSGNWQYMTDVKRHRAGK
                     AVGIDNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDKKILKGELIKNQYVRD
                     RNGPYNPLTIYDITATLDGNRFTGSAKVNTKLKTSHADKEYLFFHTDADQRLEGGFFG
                     DNGEELAGRFISNDKSVFGVFAGKQKTETANASDTNPALPSGKHTKILDSLKISVDEA
                     ADKKARPFEVSPMPDFGHPDKLLVEGREIPLVSQEKTIKLADGREMTVRACCDFLTYV
                     KLGRIKTDRPAVKPKVQDEEGDEEDTGVDSVEEGEIGIGDEDEGTEDEAVEDGEESEE
                     EISEDDNGEDEEEIAEDEGEEEPEEESPEEGNGSSGSIPPAPEASKGRDIDLFLKGIR
                     TAEADIPKNGTAHYTGTWEARISTPIQWDNQADEKAAKAEFTVNFGEKSISGTLTEKN
                     GVEPAFHIEKGKIEGNGFYATARTRENGINLSGTGSTDPKTFQANDLRVEGGFYGPKA
                     EELGGIIFNNDGKSLGITEGTENKVEAEVDAEVDVGKQLESEVKHQFGVVFGAKKDNK
                     EVEK"
BASE COUNT         1340 a         1641 c         1412 g         1746 t
ORIGIN      
        1 ccgctctgcc gccattccca caaaagtggg aatccagttt ttcgagtttc agtcattccc
       61 gataaattgc cttagcattg aatgtctaga ttcccgcctg cgcgggaatg acgacggaaa
      121 tcttgtttat attgaatcaa aaaaacctgc accttaatca gttggcggtt tagtccgact
      181 tttggggtgc agatcaagct ttcagacggt atttccttta aaacttcatt tcgagcgcga
      241 ggctgaagtt cctgcccggt gcggcatacc ttccatagtt gctgtcgccg ccgtgccggt
      301 ttgccgtgct ttccgcggtc tggcgcaagg attcccaagt aacgtagcgg tagttgccga
      361 tattgtagat agccgccctc aaggtcagcc gttttttcag attcagatag gcggaaacgt
      421 ctgccgtcga ccaagaagac gacgctcttt ttgtcgaata tcgtttttga tcgcctgcca
      481 gataagcaag ctcgtcaggg tttttccctt tggaataggt cagcataatg tttgcgcccc
      541 atttcccctc gggctggtcg tatccgaacc ccaaaacata acgcgacggc tgtaccgcat
      601 ccaaagcata gctgcggagg gacagtcccg gccggttgga taccgatttc ggtttgatac
      661 ggttgtacgc caatgtggta tacaaacctt cgggcagttt gccgtacaca ccgttccagt
      721 cgatttttcc caatatatta acgccttgga gcgacatatt ttgggcattg taataatcgc
      781 gtatatcaat ctctgtcaat tgtcctgcct gattcggcaa tttggttttg tgatcggcaa
      841 cggcaatcat atcggtatag cggttgcgga agctgctgat ttccaaaaag ccgaaatcgc
      901 ccttccactg caaaccgatt tcgcggttgg ctgccttttc cgatttcagg gcgggacgct
      961 gccagccttt cggataatcg tgataaatgt ctatcccgaa aagttcttgg aatgagggcg
     1021 ttctgaagcc gctggaggcg cggtaagaca cggaaaaatg ccggttcggt ttgaacacga
     1081 tgccgctgtt ccacgaacgg tcaacatacc gcccgctgcg gacgagttct tccgacgtgg
     1141 tgaagttttt ccggtcgtac ctgccgccca agctgaaatc aaaatatttg ccgattgaaa
     1201 aacggtcgtt caaagaaatg tggatattgc tgccgttgat ttttcttggc acgcatttgc
     1261 gggaacgcaa agtttcgatg tagccgcaga ccgacccttc gacgacttcg ggcttaccca
     1321 aaagatactt atcttgattt ttatcatcga atcccgtgga ttccgaaatc cttgccgcat
     1381 tgtgggaaag ctgttcgggg cgggagatcg ctttggaagc atcgtaaccg aagcccaaag
     1441 tcagatggtg tttcgtccat ttgtttttca gcgatttctc aaacgaggca ttcaaaacat
     1501 tgtgctgttc gcggtagtgg aaacggtcgc tgctgtcgta ggaatacggt ttgtccgccg
     1561 acgcgcggca ggatttgtcc acagcaggat acacggcaca attcagcttc agcgtgttgt
     1621 tgtcggttgc cacgccctgt ttgtcaaacg acaacaccgc cttgtccgcc caattgtcag
     1681 aatacgcttc gttttcataa cggtacagca aacccatacg gcggcggcgg tgatgttcgt
     1741 caataaattt ggtgcgggaa tatttcaaac ctatgcccct gaccaacttt ttatcgccct
     1801 tccactcttc tatattcggc acgaaataca agccgtcgcg gaaatcgtcg ccgtcgtaca
     1861 ccccgctctt gtctctaaac ttgtccgcct cgtccgtacc gtaatactgt ttttccgtca
     1921 tatcgcggat gtcgtaacgc tgtttggtat cctcaaacac gccgccgaca taatgcctgc
     1981 cgccgaagcg gtagcccagc ttggcaagcc aagagccgct gcggtaatcc atcggatcgg
     2041 gcaatatcct gccgccgccc gtgtaagctt gggcggacag gttttcgtgg cgcgcctgcg
     2101 cctcccgcac ctgcgcctct tcttcagcac ttaaaggctg atttttttca atacgttctt
     2161 ttacccagcg gttgagctgg ttgttcaaat atttcccgta gcccgccaat tttgccacgg
     2221 gcttggattc acgctcgccc tctactgaga aaaatggctc tgttttctcg cgttgaatat
     2281 cgtatgtctg gcggaacgcg tccaaacggt ttatgccgta tgccaccccg tccgcaatat
     2341 cgccgtgcgg gcgcgtttcc cgcccttggc gttcggttcg gattagcagc ccttcccaac
     2401 cgtctttgct gaaccccgcg ccgagcgact tcataaattg gcggttttta ctgccgtagg
     2461 cggtttttgc ctgtatcccc cagcttttgc cgtctgaaat caggtctgcc gcttctttgg
     2521 tgcggaaggc gaccgcgccg ccgagtgcgc cgctgccgtg atcggacgaa ccggcacctt
     2581 tgtcgatttc caccgtgctg atgttttcat attcgatttc gttgattgca ccgctgccgc
     2641 cgcgtccgcc gtatccgctc aacgatccct gcacggtaaa cgcctgtatt tgggcaacgc
     2701 cgtcaaccga aaccgccaca cggtttttat ccacgccgcg tatcgagtag ccgccgctcg
     2761 cgccgttgcc ctgttcgaca accgccacgc ccggatcgta gcgcgtcagg tcgcggatac
     2821 cgagtacctg ttctttgttc aacgtttccg acgttttgac gattttgccc aaaccggtcg
     2881 cctctttcga tcgccgtccc actttggcgg cacggacggt aacctctttc agggattggg
     2941 tctgcgccgc atcaggtgcc gccgtttcag ggtttgccgc atatgatggg aaagcggttg
     3001 caatggccaa ggcggtcagg gtaagctgaa aaccgtgttt cttattcatt tttccacctc
     3061 tttattatct ttcttcgcac cgaataccac gccgaattgg tgtttaactt cagattctaa
     3121 ctgtttgcca acatcaactt cagcatcaac ttcagcttca actttatttt cagtaccttc
     3181 agttatacca agagatttcc catcattatt gaaaataata ccgcccaatt cctccgcctt
     3241 cggaccgtaa aatcctcctt ctacacgaag atcattagct tggaaggttt tggggtcggt
     3301 cgaaccagtt cccgaaagat tgatgccgtt ttcccgagtg cgcgctgtcg cgtagaaacc
     3361 gttgccctca atcttgcctt tttcaatatg gaaagcaggt tctacaccgt ttttctccgt
     3421 cagcgttccg gaaatcgatt tctcgccgaa attaacggta aattctgctt ttgccgcttt
     3481 ttcatccgcc tgattgtccc attgaatggg tgtgctgata cgcgcttccc aagtgccggt
     3541 ataatgcgcc gttccgtttt ttggaatgtc ggcttccgcc gtgcggatac ctttcaggaa
     3601 aaggtcgatg tccctgcctt tagaggcttc cggggcaggc gggatgctgc ctgaactgcc
     3661 gtttccttct tccggcgatt cttcttcggg ttcttcttcg ccttcgtctt cggcgatttc
     3721 ttcttcgtct tcaccgttat catcttcgga aatttcttct tcgctttctt cgccgtcttc
     3781 tacggcttcg tcttccgtgc cttcgtcttc atcgccgatt ccgatttcgc cttcttcgac
     3841 gctatcaacg cctgtatcct cttcgtcccc ctcttcatcc tgcaccttcg gtttgacggc
     3901 gggacgatcg gtttttatcc gtccgagttt cacataggtc aaaaagtcgc aacaagcacg
     3961 gacggtcatt tccctgccgt cggcaagctt gatggttttc tcttggctaa ccaaaggaat
     4021 ttcacgccct tcgacaagaa gcttgtcggg atgaccaaaa tcgggcatag gggaaacctc
     4081 aaacggacgg gcttttttat cagccgcctc gtcaacggaa atttttagag aatccaagat
     4141 tttggtgtgt tttccagacg gcagggcagg atttgtatct gatgcgtttg ctgtctctgt
     4201 tttttgtttg cctgcgaata cgccgaatac gcttttgtcg ttgctgataa accgtccggc
     4261 aagctcttct ccgttatcac cgaaaaaacc gccctcaagc cgctgatcgg catcggtatg
     4321 gaaaaacaaa tattctttat cagcgtggct cgtcttcaac ttggtgttaa ctttggcact
     4381 gccggtaaag cggttgccgt ccaatgttgc agtaatgtcg taaatggtca gcggattata
     4441 gggaccattt ctatctcgca catactgatt tttaatcagc tcgcccttta ggattttttt
     4501 gtcgaaatca accgtatatt tggcaggatg cttttccctt tcgtcgacat ccttagccgc
     4561 ataagaagtt gcaccaacat cgttaccata aaatgtgata taacccaaat tgtcaatgcc
     4621 aaccgcctta cctgctcgat gacgtttgac atcggtcata tattgccagt taccagaata
     4681 ttccaccgtt cccgcactcg gtaaagattg ggaaggacgt tctccggaat aatatacaaa
     4741 accgtcataa cctaagcggt tggaaaactg cttgtgatct gaagtccact taatttcatc
     4801 ttttcccttt acatatacat aacctgcatc tacaaattta taatcatatt ttttattttc
     4861 attttctgat gtcctaattt ctacatcggg atcacgttta tgaatttcgc ttttaagttg
     4921 ttgaagttta ttttcttttg aaccgtataa aaacagaaca tcaccttctt taaacgacag
     4981 ctgttcttct gcttgtttgc tatcgggaat taccgtgcca tcttcacgat gaaaagcagt
     5041 attccgcctt ggcagccgca ttgccgcacc gacggcgggc cggttgaccg gcgtgatttc
     5101 taccgaaggc tcggcaggag ctggagcagg cttatccgca ggattggaag atttggaatc
     5161 tgacagagtt ggcgcggtcg gcgttgattc gacaacaggc tgtacgccga aattgccgcc
     5221 gatacaagat gccaaaagta agggcaacaa gacaatgccg ccataattcg gtttacacat
     5281 ccctactttt cctcctattt gattaataat aattatcatt atattaatat gtacagataa
     5341 tatcaagccg tttttatagt gaattaacaa aaatccggac aaggcgacga gccgcagaca
     5401 gtacagatac atcccgtcat tcccacgaac ctgcatcccg tcattcccac gaacctacat
     5461 tccgtcattc ccacgaaagt gggaatccag ttcgttcggt ttcgcttgtt ttaagtttcg
     5521 ggtaacttcc acttcgtcat tcccgcgcag gcgggaatcc agttttttga gtttcagtca
     5581 tttccgataa attgctttag cattgaatgt ctagattccc gcctgcgcgg gaatgacgaa
     5641 tccatccata cggaaacctg caccacgtca ttcccacgaa cctacatccc gtcattccca
     5701 cgaaagtggg aatccagttt tttgagtttc agtcattccc gataaattgc cttagcattg
     5761 aatgtctgga ttcccgcctg cgcgggaatg acgaatccat ccgtacggaa acctgcacca
     5821 cgtcattccc acgaaagtgg gaatccagtt ttttgagttt cagtcatttc cgataaattg
     5881 ccttagcatt gaatgtctag attcccgcct gcgcgggaat gacggatttt aggttggggg
     5941 catttattgg gaaaatcaga aaccgctccg ccgtcattcc cacgaaagtg ggaatctaga
     6001 aatttaatgt tgcggcacta gccaaaaaaa ccgaaaccga acggactgga ttcccgcctg
     6061 cgcgggaatg acgaatccat ccatacggaa acctgcacca cgtcattccc acgaaagtgg
     6121 gaatctagtt ttttgagtt
//
LOCUS       DBBZYD010000112         5992 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.112, whole genome shotgun sequence.
ACCESSION   DBBZYD010000112 DBBZYD010000000
VERSION     DBBZYD010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5992
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.112"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(141..728)
                     /locus_tag="ACJJDL_001842"
     CDS             complement(141..728)
                     /locus_tag="ACJJDL_001842"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HGG7574506.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFAALS"
     gene            891..2297
                     /gene="dnaB"
                     /locus_tag="ACJJDL_001843"
     CDS             891..2297
                     /gene="dnaB"
                     /locus_tag="ACJJDL_001843"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HGG7574507.1"
                     /translation="MNDYTAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
     gene            2599..3267
                     /locus_tag="ACJJDL_001844"
     CDS             2599..3267
                     /locus_tag="ACJJDL_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HGG7574508.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKGGAPNNKCDFGKKGQGMLAFGDKNGNK
                     TYDGDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYST
                     NQDLTNTSRFVYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRNDRRTV
                     CQYK"
     gene            3297..3917
                     /gene="pilV"
                     /locus_tag="ACJJDL_001845"
     CDS             3297..3917
                     /gene="pilV"
                     /locus_tag="ACJJDL_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HGG7574509.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNNTLSHTLSAVDGEFA
                     IDAIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTFSGNAFSSNCDN
                     KANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE"
     gene            3914..4867
                     /locus_tag="ACJJDL_001846"
     CDS             3914..4867
                     /locus_tag="ACJJDL_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HGG7574510.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHIEQDVVSDVTQKDSL
                     FSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASADTTVVSSCA
                     AISKPGKQILNLEDVKKELKIVSQDKERNGNIARQRHVVNAYAVGRIAGEEGLFRFQL
                     NEKGEWGNPQLLVKKINKMDIRYIYVSGCPEDDDAGKEETFRYTDKFNSAQDAVTPAG
                     VEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            4846..5439
                     /locus_tag="ACJJDL_001847"
     CDS             4846..5439
                     /locus_tag="ACJJDL_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HGG7574511.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRSCPANSTNLCIDNKGTKYKKGTQSVSKMPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            5444..5917
                     /locus_tag="ACJJDL_001848"
     CDS             5444..5917
                     /locus_tag="ACJJDL_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HGG7574512.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVDFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK"
BASE COUNT         1652 a         1312 c         1536 g         1492 t
ORIGIN      
        1 tgacagtaac cgtagcaact gaaccgtcat tcccacggaa gtgggaatct agaaataaaa
       61 agcagcaggc atttatcgga aataactgaa attcaatacc gcaaaaatct acccgaaatg
      121 atatagcgga ttaacaaaaa tcaggacaag gcggcaaaac gtttggcgac ttcgtcccag
      181 ttgacgattt cccagaaacc tttcaggtag ttaggacggc tgttgcggta gtcgatgtag
      241 taggcgtgtt cccacacgtc gcaggtcagc agcggcgtgt tttcagtggt cagcggcgta
      301 gcggcgttgg aagtggaaac caaatccaat ccgccggcag gggtttttac cagccacgcc
      361 caaccggagc cgaaagtacc ggccgcgcag gcattgaacg cttcttggaa tttctcgaag
      421 ctgccccatt tcgcgtcgat ggcggcggcc agttcgccgg aaggtttgcc ttgacctttg
      481 ggcgtgaaac ccagccagta gaaagtgtgg ttccaagttt gggctgcgtt gttgaacacg
      541 ccgcccgaag attttttcac aatctcttcc aaaggcaggt tttcaaattc ggtgcctttg
      601 atttgattgt tcaggttggt gatgtaggtt tgatggtgtt tgccgtagtg gaattccaaa
      661 gtttctttgc tcagatgcgg ggacaatgcg tccagttcat aaggcagttg cggcagctta
      721 tgttccattt tgtgctccta atattgtttt aaatgttgta ttttggcagt gttgctgcaa
      781 atagctcagc agcgcacata ttttacctgt tttgagggat ggaaaccaat taaacctgct
      841 ttacgctata atagaaggtt gcaatttcgg cacgacagat aggatgtacc atgaacgatt
      901 acacagctat gccgtctgaa gaccgtgagg tcggcgcatt gtcgctgcct ccacattcga
      961 tggaggcgga acaatccgtt ttgggcggtt tgatgctgga aaatccggct tgggacagga
     1021 ttgccgatgt ggtttccggt gaagacttct accgccacga acaccgcctg attttccgat
     1081 ccattgctaa attaatcaat gagagccgtc ccgccgatgt gattacggtt caggaagatt
     1141 tgcagcggaa cgaagaattg gaagcggcag gcggattcga atatctgatt acgctggcgc
     1201 aaaacacccc gtctgccgcc aacatccgcc gctacgccga aatcgtgcgc gagcgttcca
     1261 tcatgcgcca actcgccgaa gtggggacgg aaatcgcccg cagcgcatac aatccgcaag
     1321 gcagggacgc ggggcagctt ttggacgagg cggaaaacaa agtattccaa atcgccgaaa
     1381 gcaccgccaa atccaagcag ggctttttgg agatgcccga tttgctgaaa gaagtcgtac
     1441 agcgcatcga tatgctctac tcgcgcgaca atcccgatga agttaccggc gtgccgacag
     1501 ggttcatcga cctcgacaaa aaaacctcgg gtctgcaacc cggcgacctg attatcgttg
     1561 ccggtcgtcc gtctatgggt aagaccgcct tttctatcaa tatcgccgaa cacgttgccg
     1621 tagaaggcaa gctgccggtt gccgtcttct caatggaaat gggcggggcg caactggtca
     1681 tgcgtatgct cggctcggtc ggacggttgg atcaaagcgt tttgaaaacc ggcaggctcg
     1741 aagacgaaca ctggggtcgc ctgaacgaag cagtcgtcaa actctccgac gcgcccgtgt
     1801 acatcgacga gaccccgggt ctgaccgcgc tcgaactgcg cgcccgtgcc cgccgtctcg
     1861 cccgtcaatt taacaataag cttggattga ttgtcatcga ctacctgcaa ctgatggcag
     1921 gatccggccg ttccgacaac cgagcttcgg agctgggaga gatttcacgt tcgctcaaag
     1981 cgttggcgaa agaattgcaa gtccccatca tcgccctgtc gcaattgagc cgcacggtcg
     2041 aatcgcgtac cgacaaacgc ccgatgatgt ccgaccttcg cgaatccggt gctatcgagc
     2101 aggatgccga cctgattatg tttatgtacc gcgacgaata ctacaaccaa gactcgccca
     2161 tgaaaggcct tgccgaatgt atcatcggca aacaccgcaa cggtcccgtc ggtaaaatct
     2221 tcctcacatg gacgggacaa ttcaccaaat tcgacaatgc tgcctatatt cccgaggagg
     2281 caaagataga ggattaaatg gctatataaa aatttattag gcgaaatcag gcaaaatcgt
     2341 ttaaaatcat gcttagagat tgccctaaaa aataaaacgc ggtcttgagg catttttgca
     2401 ttcagcccgc atataattga aaatatagtg gattaacaaa aatcaggaca aggcaacgaa
     2461 gccgcagacc gtacaaatag tacggaaccg attcacttgg tgcttgagca ccttagagaa
     2521 tcgttctctt tgagctaagg cgaggcaacg ccgtactggt ttgaatttaa tccacgatac
     2581 attaccagtt aacgtcctat gtgtacacga aaacaacaag gtttcacgct aacagagctg
     2641 ctcatcgtga tggtcattgc agccattatg gcgatgatag ccctccccaa tatgagccaa
     2701 tggattgcat cccgccgcat tgccagtcat gcggagcgga ttgccaacct tttgcgtttc
     2761 tccaggggag aagccgtccg gctcaatctt cctgtctata tctgtcctgt tcaagttaaa
     2821 aaaggcggtg cgcccaacaa taaatgtgac ttcggcaaga aggggcaggg aatgttggct
     2881 tttggcgata agaatggcaa taagacatat gacggcgata cggcggatgt tctccttcgc
     2941 agtgtggtat tgaatgatga tatcaatgat aagcggatta attatgcctt taaccatatc
     3001 gctttcggtc aaacgcagcc gaccgctgac cgtgtagttt ggacattcaa tcaaaacggg
     3061 acgttcggtt attctaccaa tcaggatctc acgaatactt ccagatttgt ttactccgac
     3121 ggttatatcc aaatcgtgct gacagatgcg agagcagttt cagatgccga taagaaattc
     3181 cgttcggcgg tggttttgat taacagcagc ggcagggttg aggtttgtcc tagaaacgat
     3241 aggcgtaccg tatgccaata taaatgattg ttttagtcgg tttgggaaat aaaaaaatga
     3301 agaataatga ttgcttccgc ctgaaaaacc cccagtccgg tatggcgctg atagaagtct
     3361 tggttgctat gctcgttctg accatcggta ttttggcgtt actgtctgtg cagttgcgga
     3421 cagtcgcttc cgtcagggag gcggagacac aaaccatcgt cagccaaatc acgcaaaacc
     3481 tgatggaagg aatgttgatg aatccgacca ttgattcgga cagcaacaag aaaaactata
     3541 atctttacat gggaaacaat acactatcgc atacactatc agctgtggat ggtgagtttg
     3601 cgattgatgc cataaaaact aagacacagt tggcagaggc acaattgaag agatttagtt
     3661 atgagctgaa aaatgccttg ccggatgcgg cagccatcca ttacgccgtc tgcaaggatt
     3721 cgtcgggtaa cgcgccgaca ttctccggca atgctttttc ttcaaattgc gacaataagg
     3781 caaacgggga tactttaatt aaagtattgt gggtaaatga ttcggcaggg gattcggata
     3841 tttcccgtac gaatcttgag gtgagcggcg acaatatcgt atatacctat caggcaaggg
     3901 tcggaggtcg ggaatgagac gtaaaatgct aaacgtacca aaaggcagtt atgatggtat
     3961 gaaaggtttt accattattg aatttttggt tgcgggcatg ctcagtatga ttgtcctgat
     4021 ggcggtcgga tcgagttact tcacatcccg gaaattaaat gatgcggcaa acgagcgtct
     4081 tgctattcaa caggatttgc ggaatgcggc aacattaatt gtccgcgatg caagaatggc
     4141 ggggagcttc ggttgtttca atatgtctga gcatatcgaa caggatgttg tttccgatgt
     4201 gacgcaaaaa gactctcttt tttccttaaa aaggaacagt acaaggaaca gtacaaataa
     4261 acttatcccc atagcggaat cttcaaatat cggatatcag ggttttatcc agcgccttaa
     4321 cgcattgatt ttccaatacg gaatcgatga tgttaatgca agcgccgata ctaccgtcgt
     4381 cagcagctgt gccgcaatat cgaaaccggg taagcaaatc cttaatttag aagatgtaaa
     4441 aaaagaattg aagattgtga gtcaggataa ggagcgaaat ggcaatatag cgcgtcaaag
     4501 gcatgtggtc aatgcctatg cggtcggcag gattgccggt gaggaaggtt tgttccgctt
     4561 ccaattgaat gaaaagggcg agtggggtaa tcctcagttg ttggttaaaa agattaataa
     4621 aatggatata cggtatattt atgtttccgg ctgtcctgaa gatgacgatg ccggcaaaga
     4681 ggaaacattc agatatacgg ataaattcaa cagcgcccaa gatgctgtta cgcctgccgg
     4741 ggtggaggtt ttattgagta gcggtactga taccaagatt gccgcttctt cagacaatca
     4801 tatttatgct taccgtatcg atgcgacaat acgcggggga aatgtatgcg caaacagaac
     4861 actttgacgg gaatcccgac ttctgacgga cagagggggt ttgcactgtt tatcgtgctg
     4921 atggtgatga tcgtcgtggc ttttttggtt gtaactgccg cgcagtctta caataccgag
     4981 cagcggatca gtgccaacga atcagacagg aaattggctt tgtctttggc cgaggcggct
     5041 ttgcgggaag gcgaacttca ggttttggat ttggaatatg atacggacag taaggttaca
     5101 tttagcgaaa actgtggaaa aggtctgtgt accgcagtga atgtgcggac aaataatgat
     5161 aatgaagagg cttttgacaa tatcgtggtg caaggcaagc ccaccgttga ggcggtgaag
     5221 cgttcttgcc ctgcaaattc taccaacctg tgcattgaca ataaagggac gaaatataag
     5281 aaaggcacgc aaagcgtcag caaaatgcca cgttatatta tcgaatattt gggcgtgaag
     5341 aacggagaaa atgtttatcg ggttactgcc aaggcttggg gtaagaatgc caataccgtg
     5401 gtcgtccttc aatcttatgt aagcaataat gatgagtaat aaaatggaac aaaaagggtt
     5461 tacattgatt gagatgatga tagtcgtcgc gatactcggc attatcagcg tcattgccat
     5521 accttcttat caaagttata ttgaaaaagg ctatcagtcc cagctttata cggagatggt
     5581 cggtatcaac aatatttcca aacagtttat tttgaaaaat cccctggacg ataatcagac
     5641 catcaagagc aaactggaaa tatttgtctc aggctataag atgaatccga aaattgccga
     5701 aaaatataat gtttcggtgg attttgtcaa taaggaaaaa ccaagggcat acagcttggt
     5761 cggcgttcca aagacgggga cgggttatac tttgtcggta tggatgaaca gcgtgggcga
     5821 cggatacaaa tgccgtgatg ccgcttctgc ccaagcccat ttggagacct tgtcctcaga
     5881 tgccggctgt gaagccttct ctaatcgtaa aaaataaggt tgttttgcca ataccgtctg
     5941 aaaatcaatg ttcagacggt atttttatgg gtatagtgga ttaacaaaaa tc
//
LOCUS       DBBZYD010000113         5874 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.113, whole genome shotgun sequence.
ACCESSION   DBBZYD010000113 DBBZYD010000000
VERSION     DBBZYD010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5874
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.113"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..413)
                     /locus_tag="ACJJDL_001849"
     CDS             complement(<1..413)
                     /locus_tag="ACJJDL_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HGG7574513.1"
                     /translation="MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGA"
     gene            complement(449..562)
                     /gene="rrf"
                     /locus_tag="ACJJDL_001850"
     rRNA            complement(449..562)
                     /gene="rrf"
                     /locus_tag="ACJJDL_001850"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(659..3550)
                     /locus_tag="ACJJDL_001851"
     rRNA            complement(659..3550)
                     /locus_tag="ACJJDL_001851"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3956..4031)
                     /locus_tag="ACJJDL_001852"
     tRNA            complement(3956..4031)
                     /locus_tag="ACJJDL_001852"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3996..3998),aa:Ala,seq:tgc)
     gene            complement(4037..4113)
                     /locus_tag="ACJJDL_001853"
     tRNA            complement(4037..4113)
                     /locus_tag="ACJJDL_001853"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4077..4079),aa:Ile,seq:gat)
     gene            complement(4215..5755)
                     /locus_tag="ACJJDL_001854"
     rRNA            complement(4215..5755)
                     /locus_tag="ACJJDL_001854"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1279 a         1727 c         1263 g         1605 t
ORIGIN      
        1 gcgccgaccg aagcctgatc cttcagcttc gccagcaccg cagggccgat gccctttacc
       61 ttggtcaaat cgtccacaga cttgaacgca ccgttttgcg cacggtattc cgcaatggcc
      121 ttcgccttcg cagggcctat gcccggcagc gcctccaact cctgctgcga agccgcattg
      181 atgtttaccg ccgcaaggga gaaggcgcag gagaacagca tacagaacag cacgaacatt
      241 ttcttcatgg tttttccttt aagggttgca aacaataaac cgcatcttgc gacgataaaa
      301 cgagtcattc taaaatgaat atcccaaagt ttcaagccgt tcctccgcaa acccgaccgg
      361 acgccgtacg gatactgtcc cgccatcccc gacatttttt ccgggcaaag caaaaacccc
      421 cgaataatcg ggggttttct gaaagggtgt ttggcagtga cctactttcg catggaagaa
      481 ccacactatc atcggcgctg agtcgtttca cggtcctgtt cgggatggga aggcgtggga
      541 ccaactcgct atggccgcca aacttaaact gttacaaatc ggtaaagcct taatcaatat
      601 attcggtaat gactgaatca gtcagtaagc ttttatctct tgaagttctt caaatgatag
      661 agtcaagcct cacgagcaat tagtatgggt tagcttcacg cgttaccgcg cttccacacc
      721 ccacctatca acgtcctggt ctcgaacgac tctttagtgc ggttaaaccg caagggaagt
      781 ctcatcttca ggcgagtttc gcgcttagat gctttcagcg cttatctctt ccgaacttag
      841 ctacccggct atgcaactgg cgttacaacc ggtacaccag aggttcgtcc actccggtcc
      901 tctcgtacta ggagcagccc ccgtcaaact tccaacgccc actgcagata gggaccaaac
      961 tgtctcacga cgttttaaac ccagctcacg taccacttta aatggcgaac agccataccc
     1021 ttgggaccga ctacagcccc aggatgtgat gagccgacat cgaggtgcca aactccgccg
     1081 tcgatatgaa ctcttgggcg gaatcagcct gttatccccg gagtaccttt tatccgttga
     1141 gcgatggccc ttccatacag aaccaccgga tcactatgtc ctgctttcgc acctgctcga
     1201 cttgtcggtc tcgcagttaa gctacctttt gccattgcac tatcagtccg atttccgacc
     1261 ggacctaggt aaccttcgaa ctcctccgtt acgctttggg aggagaccgc cccagtcaaa
     1321 ctgcctacca tgcacggtcc ccgacccgga tgacgggtct gggttagaac ctcaaagaca
     1381 ccagggtggt atttcaagga cggctccaca gagactggcg tctctgcttc aaagcctccc
     1441 acctatccta cacaagtgac ttcaaagtcc aatgcaaagc tacagtaaag gttcacgggg
     1501 tctttccgtc tagcagcggg tagattgcat cttcacaacc acttcaactt cgctgagtct
     1561 caggaggaga cagtgtggcc atcgttacgc cattcgtgcg ggtcggaact tacccgacaa
     1621 ggaatttcgc taccttagga ccgttatagt tacggccgcc gtttactggg gcttcgatcc
     1681 gatgctctca catcttcaat taaccttcca gcaccgggca ggcgtcacac cctatacgtc
     1741 cactttcgtg ttagcagagt gctgtgtttt taataaacag tcgcagccac ctattctctg
     1801 cgaccctcca gggcttacgg agcaagtcct taaccttaga gggcatacct tctcccgaag
     1861 ttacggtatc aatttgccga gttccttctc ctgagttctc tcaagcgcct tagaattctc
     1921 atcctgccca cctgtgtcgg tttgcggtac ggttcaattc aaactgaagc ttagtggctt
     1981 ttcctggaag cgtggtatcg gttacttcat gtccgtagac actcgtcatc acttctcggt
     2041 gttaagaaga cccggatttg cctaagtctt ccacctaccg gcttaaacaa gctattccaa
     2101 cagcttgcca acctaacctt ctccgtcccc acatcgcatt tgaatcaagt acaggaatat
     2161 taacctgttt cccatcgact acgcatttct gcctcgcctt aggggccgac tcaccctacg
     2221 ccgatgaacg ttgcgtagga aaccttgggc tttcggcgag cgggcttttc acccgcttta
     2281 tcgctactca tgtcaacatt cgcacttctg atacctccag cacactttac aatgcacctt
     2341 catcggccta cagaacgctc ccctaccatg ccagtaaact ggcatccgca gcttcggtta
     2401 tagatttgag ccccgttaca tcttccgcgc aggacgactc gaccagtgag ctattacgct
     2461 ttctttaaat gatggctgct tctaagccaa catcctggct gtctgggcct tcccacttcg
     2521 tttaccactt aatctatcat tggggacctt agctggcggt ctgggttgtt tccctcttga
     2581 caacggacgt tagcacccgc tgtctgtctc ccgaggaacc acttgatggt attctgagtt
     2641 tgccatgggt tggtaagttg caataacccc ctagccataa cagtgcttta cccccatcag
     2701 tgtcttgctc gaggcactac ctaaatagtt ttcggggaga accagctatc tccgagtttg
     2761 tttagccttt cacccctatc cacagctcat ccccgcattt tgcaacatgc gtgggttcgg
     2821 tcctccagta cctgttacgg caccttcaac ctggccatgg atagatcact cggtttcggg
     2881 tctacaccca gcaactcatc gccctattaa gactcggttt ccctacgcct cccctattcg
     2941 gttaagctcg ctactgaatg taagtcgttg acccattata caaaaggtac gcagtcacac
     3001 ctctagggcg ctcccactgt ttgtatgcat caggtttcag gttctgtttc actcccctcc
     3061 cggggttctt ttcgcctttc cctcacggta ctggttcact atcggtcgat gatgagtatt
     3121 tagccttgga ggatggtccc cccatattca gacaggattt cacgtgtccc gccctacttt
     3181 tcgtacgctt agtaccgctg ttgagatttc gaatacggga ctgtcaccca ctatggtcaa
     3241 gcttcccagc ttgttcttct atctcgacag ttattacgta caggctcctc cgcgttcgct
     3301 cgccactact tgcggaatct cggttgattt cttttcctcc gggtacttag atggttcagt
     3361 tctccgggtt cgcttctcta agtctatgta ttcaacttag gatactgcac agaatgcagt
     3421 gggtttcccc attcggacat cgcgggatca ttgctttatt gccagctccc ccgcgctttt
     3481 cgcaggctta cacgtccttc gtcgcctatc atcgccaagg catccacctg atgcacttat
     3541 tcacttgact ctatcatttc aagaacttct ttgactttgc ctaacattcc gttgactaga
     3601 acatcagact tgaatttcct actttgataa agcttactgc tttgttgtgt cttaatcctg
     3661 ccttttgtgt ttcaggatta agtcgataca atcatcaccc aaatactgtg tttgttttct
     3721 tttctctcgc gagagatttt tatcctttgc aaagaataaa aaatcaaaac aaacgctttg
     3781 tctttgtttg ttgatttcgg ctttccaatt tgttaaagat cgatgcgttc gatattgcta
     3841 tctactgtgc aaatcaaaac gagctgatta ttatatcagc attttgttct tggtcaagtg
     3901 tgacgtcgcc ctgaatggat tctgttccat tcttccgttt tgatttgtac agtattggtg
     3961 gaggcaaacg ggatcgaacc gatgaccccc tgcttgcaaa gcaggtgctc taccaactga
     4021 gctatgcccc cgttcttggt gggtctggga ggacttgaac ctccgacccc acgcttatca
     4081 agcgtgtgct ctaaccagct gagctacaaa cccggattct cttcttaagc gaatcttgcc
     4141 ttcactcaag cttcttccgc atctttttca gtttaccgat aagtgtgaat gcctaaagcc
     4201 tcttctttct ctagaaagga ggtgatccag ccgcaggttc ccctacggct accttgttac
     4261 gacttcaccc cagtcatgaa gcataccgtg gtaagcggac cccttgcggt taccctacct
     4321 acttctggta tcccccactc ccatggtgtg acgggcggtg tgtacaagac ccgggaacgt
     4381 attcaccgca gtatgctgac ctgcgattac tagcgattcc gacttcatgc actcgagttg
     4441 cagagtgcaa tccggactac gatcggtttt gtgagattgg ctccgcctcg cggcttggct
     4501 accctctgta ccgaccattg tatgacgtgt gaagccctgg tcataagggc catgaggact
     4561 tgacgtcatc cccaccttcc tccggcttgt caccggcagt ctcattagag tgcccaactg
     4621 aatgatggca actaatgaca agggttgcgc tcgttgcggg acttaaccca acatctcacg
     4681 acacgagctg acgacagcca tgcagcacct gtgttacggc tcccgaaggc actcctccgt
     4741 ctctggagga ttccgtacat gtcaagacca ggtaaggttc ttcgcgttgc atcgaattaa
     4801 tccacatcat ccaccgcttg tgcgggtccc cgtcaattcc tttgagtttt aatcttgcga
     4861 ccgtactccc caggcggtca atttcacgcg ttagctacgc tactaagcaa tcaagttgcc
     4921 caacagctaa ttgacatcgt ttagggcgtg gactaccagg gtatctaatc ctgtttgcta
     4981 cccacgcttt cgggcatgaa cgtcagtgtt gtcccaggag gctgccttcg ccatcggtat
     5041 tcctccacat ctctacgcat ttcactgcta cacgtggaat tctacctccc tctgacacac
     5101 tcgagtcacc cagttcagaa cgcagttccc gggttgagcc cggggatttc acatcctgct
     5161 taagtaaccg tctgcgcccg ctttacgccc agtaattccg attaacgctc gcaccctacg
     5221 tattaccgcg gctgctggca cgtagttagc cggtgcttat tcttcaggta ccgtcatcag
     5281 ccgctggtat tagcaacagc cttttcttcc ctgacaaaag tcctttacaa cccgaaggcc
     5341 ttcttcagac acgcggcatg gctggatcag gcttgcgccc attgtccaaa attccccact
     5401 gctgcctccc gtaggagtct gggccgtgtc tcagtcccag tgtggcggat catcctctca
     5461 gacccgctac tgatcgtcgc cttggtaggc ctttacccca ccaactagct aatcagatat
     5521 cggccgctcg aatagcgcaa ggcccaaagg tcccctgctt tctctctcaa gacgtatgcg
     5581 gtattagctg atctttcgat cagttatccc ccactactcg gtacgttccg atatgttact
     5641 cacccgttcg ccactcgcca cccgagaagc aagcttctct gtgctgccgt ccgacttgca
     5701 tgtgtaaagc atgccgccag cgttcaatct gagccaggat caaactctta tgttcaatct
     5761 ctaacttttt aacttctggt ctgcttcaaa gaaaccaaca ggacaatgtt caaaacatta
     5821 tcttgtctgt ctttcaaaca gtgtgaggct caaggcactc acacttatcg gtaa
//
LOCUS       DBBZYD010000114         5811 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.114, whole genome shotgun sequence.
ACCESSION   DBBZYD010000114 DBBZYD010000000
VERSION     DBBZYD010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5811
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.114"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(231..386)
                     /gene="rpmG"
                     /locus_tag="ACJJDL_001855"
     CDS             complement(231..386)
                     /gene="rpmG"
                     /locus_tag="ACJJDL_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HGG7574514.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(418..651)
                     /gene="rpmB"
                     /locus_tag="ACJJDL_001856"
     CDS             complement(418..651)
                     /gene="rpmB"
                     /locus_tag="ACJJDL_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HGG7574515.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(901..2427)
                     /gene="farB"
                     /locus_tag="ACJJDL_001857"
     CDS             complement(901..2427)
                     /gene="farB"
                     /locus_tag="ACJJDL_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HGG7574516.1"
                     /translation="MDYPPLKGAALAWITLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     SLVIFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVTALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPIIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSFVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            complement(2451..3623)
                     /gene="farA"
                     /locus_tag="ACJJDL_001858"
     CDS             complement(2451..3623)
                     /gene="farA"
                     /locus_tag="ACJJDL_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HGG7574517.1"
                     /translation="MATHADETTIQNRQEANSAKVKRKRRLTALTLLFALAAAAAGSA
                     FFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVL
                     AYERAKNELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSA
                     EELAHARAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQ
                     RTQIRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPA
                     ELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDV
                     DRHPLRIGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     gene            complement(3667..4026)
                     /locus_tag="ACJJDL_001859"
     CDS             complement(3667..4026)
                     /locus_tag="ACJJDL_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HGG7574518.1"
                     /translation="MINLELKAINLYDCAFEDFVPEIKDNFCVGIDLDIGTDDSDAAD
                     IFSVRICSPKWILHNCFQNQRVKWGAGMMIMNEFNHSVIKSEIEKILKECSKETWEKS
                     LTYLLRFFSWEFEDYQC"
     regulatory      4241..4285
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            4289..4762
                     /gene="queF"
                     /locus_tag="ACJJDL_001860"
     CDS             4289..4762
                     /gene="queF"
                     /locus_tag="ACJJDL_001860"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HGG7574519.1"
                     /translation="MSRNTEELQGISLLGNQKTRYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            4839..5525
                     /locus_tag="ACJJDL_001861"
     CDS             4839..5525
                     /locus_tag="ACJJDL_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HGG7574520.1"
                     /translation="MYAFTDAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYIFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDGFMAANWQGIALVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
BASE COUNT         1462 a         1613 c         1326 g         1410 t
ORIGIN      
        1 gtattattat agtggattaa caaaaatcag gacaaggcga cgaagctgca gacagtacaa
       61 atagtacgga accgattcac ttggtgcttc agcaccttag agaatcgttc tctatccttg
      121 gcagacggtt tgcagcagat tcgcatacgg cagatgtttc aagcggaaaa gaaacacgat
      181 aaaaataaaa aagcctccga acagtcggag gctttgcttt caaactgaaa ttatttcagt
      241 ttggtttctt tgtacactac gtgtttgcgg gcaaccggat cgaatttttt aatttccagt
      301 ttgccgggca tagtgcgttt atttttggta gtggtgtaga agtgaccagt acctgcactg
      361 gattccagtt tgattttatc gcgcattgca gtaatcctta attaaatagt gtttaaatta
      421 agcttcgccg cgagcacgca aatcagccaa tacgacatca atgcctactt tgtcgatggt
      481 acgcagtgca gcgttggaaa cgcgcaggcg aacccagcgg ttttcacttt ctacccaaaa
      541 acgacgtgat tgcaagttgg gcaaaaaacg gcgtttggtt ttgttgttgg cgtgcgatac
      601 gttgttgccg gacatcgggc gtttgccggt cactttgcaa actcgtgcca taatcagtct
      661 ccaaacttct aaaatagtaa aacgcgattt ataccacgaa aaacagtgtt agttcaagtg
      721 ttttaaagaa aaacggctgt tttgcgcgga taatccttcc gattgtcgca tctgtggaac
      781 gtttgcaggt gcgaaacaga tggggcgcga ttatagcgga tttcgggaac tgctgcattc
      841 aaaatgccgt ccgaacatat ttccagtatt ttcagacggc atttcaagtt ttcaaatccc
      901 tcaatgtcca ccgccgccgc cgttgtggaa cggcggtttt gccagccata tgacaggaat
      961 catgatgatg aacagcaggc tgcctgccat aaagatttca ttcgatccga tgatgaagcc
     1021 ctgctgggta atggtattgt tgatgatacc tagggtttga atgtcggaaa tgccttgttg
     1081 ggacaaatgc gccgccgttt cgtgcaatgt tgcggaatag ggcgtgatgt gttcggcaaa
     1141 gcgtgtgtgg tgcaacgctt cgcgccgttc ccacagggta ctgacgaatg atacgccgac
     1201 accgcccatc agcacgcgca agaaattcga caggctgccg gcggcggcaa tctgtccgcc
     1261 cttcatatgc gacagtgtga tggtggtcag cggcaggaag aacatggcaa cgcctgcccc
     1321 ctgccaaaac tgcggccaga tgacgttgcc gatatccatg tcggcataaa aatcggtgcg
     1381 ccaatagaaa gtgaaggcaa aagtcaggaa gctggcggtt acgagcaggc gcatatcgat
     1441 tttattgccg aacctgccga taatggggga caggaaaact gggaggatgc cgacgggcgc
     1501 ggcggcaagc cctgcccacg tggaggtata gcccaggttg gtctgcaaca ctaacggcag
     1561 cagggtcagc gtccccatat acaccataaa acccaatgac gtggcaatga cgccgacggt
     1621 aaaattccga tctttaaaca gcgataaatc gacaatcgga tatttttctc ccaattccca
     1681 aacaataaaa tacgacaagc acaccaatgc ggttacgccc aaggtaatga tttctcccga
     1741 agcgaaccag tcgagttcct tacccctgtc cagcatcatc tgtaacgcgc cgataccgac
     1801 taccatcaat gtaagcccga catagtcggt cggcatttta acggtttccg tttcccgata
     1861 tttcaaatgt ttccatgtaa tccatgccga tatgataccg atagggatat taatgaagaa
     1921 aatccaaccc caatgccagt ttccggaaat ccaaccgccg agtatcggcc cgagaacagg
     1981 ggcgacaacg acggtcattg cccacaacgc cagtgccagc gtccgttttg cgggcggata
     2041 ggatgccatt aacaggcttt gcgacaaggg aatcagcggc ccggcgataa agccctgcaa
     2101 gatgcggaaa ataaccagcg actgaaggtt gggcgcgatg ccgcacagcc acgatgtgat
     2161 gacgaaaccg acagcggcgg cggtaaacaa tttgacctcg ccgatacgtt ttgccaaaaa
     2221 gcccgttaac ggcacggaaa cggcgtttgc cacagcaaaa gaagtaatga cccacgtccc
     2281 ctgagtggtt gccgcaccga ggttgccggc gataacggga acggcgacat tggcgatagt
     2341 cgtatctaaa acttccataa atacggcaag ccccaaagac agcgtaatcc atgccaatgc
     2401 cgcaccctta agcggtggat aatccattgt gtcctccgtt tcagacggca tcagggcgcg
     2461 gattgcccga ggatttcatc gaccgtccga tcgacttccg accagtcggt actttccatt
     2521 tccggcaatg ccgcacccgg cgtttttgaa acaggcgcgc ctgcggcgga agtatccact
     2581 ttaaccgtca tcgacaaacc gatacgcaac ggatgcctgt ccacatcttc gcggttcagc
     2641 acgatacgga cggggacgcg ctgcaccact ttaatccagt tgcccgttgc gttttgcgcc
     2701 ggaatcagcg aaaacgcgct gcccgtacct gccgaaaaac ctgccaccct gccgcgataa
     2761 acaatttgtt tgccgtacaa atcggacacc agctcggcag gctgtccgat tttcatatgc
     2821 cgcaactgcg tctctttaaa attggcatcc acccacacat ccgacagcgg caccaccgcc
     2881 atcagcggcg cgcctgccgc cacctgctgc ccgacctgca ccgaacgctt cgccacctga
     2941 ccgtccgccg gcgcgcggat ttgcgtccgc tgaaggttca accacgcatc tttcaacctg
     3001 ccgattgccg tctgaaccgc cggctgttcg cgcaaagaaa cctgaccgcc caaagccgcg
     3061 cgtgccgaag actcttccgc caaagccgcc ttaactgccg cctgcgcctg agacactgcc
     3121 gcacgggcgt gtgccagctc ttcggcggac accgcgcccg attccgccaa agcagaccgg
     3181 cggcgcaaat catcctgcgc gcgtgccaaa tccgcacggc gcaaggcaac ctgcgccccc
     3241 gcctgcgaag tggcggcatt ttgccggcgg ttttgccgca ccgcctgaac cagctcgttt
     3301 tttgcccgct cgtaagccag cacatcatta tcgtcgtcca ataccgccag cacgtcgcct
     3361 tttttcacgg catccgtatc gtcgtgcaaa accttccgta ccgtaccgcc cttttgcggc
     3421 gtaacctgaa ccacgcgtcc ggcaacataa gcgtcttccg tttcctcttc gtgctgccac
     3481 cataaaaaaa acgccgaccc ggcggctgcg gcggcaagcg cgaacagcag cgtcaatgcc
     3541 gtcaggcggc gtttacgttt gacttttgcg ctattggctt cttgtctgtt ttgaattgtc
     3601 gtttcatctg catgtgttgc cattattcca attccaaata cttctaatac tatgtttttg
     3661 atttaattag cactgataat cttcaaattc ccacgaaaaa aaacgaagta aataagtcaa
     3721 tgacttttcc caagtttctt ttgaacattc tttaagaatt ttctcaattt ccgatttaat
     3781 aacagaatga ttaaattcat tcataatcat catacccgct ccccatttaa ccctttgatt
     3841 ttggaaacaa ttatgcaaaa tccatttagg agagcatatg cgaacagaaa atatatctgc
     3901 agcatcacta tcatcagttc ctatgtctaa atcaattccc acacaaaaat tgtctttgat
     3961 ttcgggaacg aaatcttcaa aggcacaatc gtaaagattg atggctttca attctaggtt
     4021 aatcatttta tattcaaaat aaataaaacc aattaaagat tggttaggat tctataccct
     4081 ggcaataact caatcaagtt aatgatttag aatgaatatt caaataaact gtatcagccc
     4141 ggcctcacag aactatttat atccacacat caccgagtaa agcaattacc catactaacc
     4201 gaagaaaact acacaaatac cgccacttat attacaatcg ccgcccgtgg ttcgaaaacc
     4261 tcccacacta aaaaactaag gaaaccctat gtcccgcaat accgaagagc tgcaaggcat
     4321 ctcgcttttg ggtaatcaga aaacccgata tccgaccggc tacgcgcctg aaattctcga
     4381 agcattcgac aacaaacatc ccgacaacga ctatttcgtc aaattcgtct gcccagagtt
     4441 caccagcctc tgccccatga ccgggcagcc cgacttcgcc accatctaca tccgctacat
     4501 tccgcacatc aaaatggtgg aaagcaaatc cctgaaactc tacctcttca gcttccgcaa
     4561 ccacggcgat tttcatgaag actgcgtcaa catcatcatg aaagacctca ttgccctgat
     4621 ggatccgaaa tacatcgaag tattcggcga gttcacaccg cgcggcggca tcgccattca
     4681 tcctttcgcc aattacggca aagcaggcac cgagtttgaa gcattggcgc gtaaacgcct
     4741 gtttgagcac gacgcacaat aaaccatcct tcccatattt cagacggcat tccttcgata
     4801 cgatatgccg tctgaacgcc tttccgaaag gtttttttat gtacgcattt accgacgcac
     4861 agcaacagaa ggcactcttc tggctggtgc tttttcatat cctcatcatc gccgccagca
     4921 actatctggt gcagttcccc ttccaaattt tcggcatcca caccacttgg ggcgcatttt
     4981 cctttccctt catcttcctt gccaccgacc tgaccgtccg cattttcggt tcgcacttgg
     5041 cacggcggat tatcttttgg gtgatgttcc ccgccctttt gctttcctac atcttttccg
     5101 ttttgttcca caacggcagt tggacaggct tgggcgcgct gtccgaattc aacacctttg
     5161 tcggacgcat cgccttagcc agctttgccg cctatgcgct cggacaaatc cttgatattt
     5221 ttgtattcaa caaattacgc cgtctgaaag cgtggtggat tgccccaacc gcatcaaccg
     5281 tcatcggcaa cgccttggat acgttggtat ttttcgccgt tgccttttac gccagcagcg
     5341 atggatttat ggcggcaaac tggcagggca tcgccttggt cgattacctg ttcaaactca
     5401 ccgtctgcgg tctgtttttc ctgcccgcct acggcgtgat tctgaatctg ctgacgaaaa
     5461 aactgacgac cctgcaaacc aaacaggcac aagaccgccc cgcgccctcg ctgcaaaatc
     5521 cgtaaaacag ccctgccggg agtcgggacg gttgggtttt cttttatttg caaacactgt
     5581 cggaacggat aaatccggat tcccgcccac ttcgtcattc ccgcgaaagc gggaatccgg
     5641 tgcgttgggt ttcagtcatt tccgataaac tcctgccgcg ttgtatttct agattcccgc
     5701 tttcgcggga atgacggcgg atgggtttcc gtgccgtggt gtccggattc ccgcccgtac
     5761 gggaatgacg gcagtgcttc cttggcttaa ttttatttta atcgactgta t
//
LOCUS       DBBZYD010000115         5798 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.115, whole genome shotgun sequence.
ACCESSION   DBBZYD010000115 DBBZYD010000000
VERSION     DBBZYD010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.115"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(59..880)
                     /locus_tag="ACJJDL_001862"
     CDS             complement(59..880)
                     /locus_tag="ACJJDL_001862"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HGG7574521.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASGQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            1292..3676
                     /gene="ppsA"
                     /locus_tag="ACJJDL_001863"
     CDS             1292..3676
                     /gene="ppsA"
                     /locus_tag="ACJJDL_001863"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HGG7574522.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPMLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFAINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            3896..5155
                     /gene="rho"
                     /locus_tag="ACJJDL_001864"
     CDS             3896..5155
                     /gene="rho"
                     /locus_tag="ACJJDL_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HGG7574523.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDSINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            5461..>5798
                     /locus_tag="ACJJDL_001865"
     CDS             5461..>5798
                     /locus_tag="ACJJDL_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003783373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574524.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTAAELVGVNKSTAAYYFHR
                     LRLLIYQNSPHLEMFDGEVEADESYFAERQNHINGIENFWNRAKRHLRKFNGIPKAHF
                     ELYLKGYERR"
BASE COUNT         1540 a         1657 c         1358 g         1243 t
ORIGIN      
        1 tgccgtctga aacctgattt cagacggcat ttccaccttc aaaccgaatc aaagcccgtc
       61 aaaacctgcg tttgagcttg cacgcctgaa ggatgtgtac ggcaagctct tccactgatt
      121 tatccgtcgt attcgcaaac ggaatgccat gccgtctgaa catactctgc gcgtccgcca
      181 cctcgctgcg gcatgtatcg attttggcat aagttgaatt cgggcggcgc tcttggcgga
      241 tggcctgcaa acgttccggc tggatggtca acccgaacag cttatcccta taaggcttga
      301 ccatacgcgg cagatcggcc gattccaaat cgtcgggaat cagcggatag tttgccgcac
      361 ggatgccgta ttgcagggcg aggtaaaggc aggtcggcgt tttgcccgaa cgcgatacac
      421 ccatcaagat tacatccgct tcctgaaggt tcttatcgct gaccccgtca tcgtggttca
      481 atgagaaatt caccgcctcc atacgtgcat cgtaacgctt cgtattaccg atactgtgat
      541 gcccctgccc ggatgccgtg gcttcggtat tgagttcttt ctccaacagt cccaaaaaag
      601 tctcaaagaa attaatctga aaagcatccg cccctttgat aatccgacgg atttcgtcat
      661 caaccacact gacaaacgca atcggacgct gaccgttttc ctgccggctc cgattgacct
      721 tctccaccac cgcgcgcgcc ttttccggcg tatcgacaaa cggatgcgta tggcgtttga
      781 acgacagatt gccaaactgg ttcagcaaag cctcgccgat attctcggca gtcagaccgg
      841 tacggtcgga aatgtaaaac acatggcgcg gactgctcat cttccatcct taaaacacag
      901 gtttaaaatc tcatcataac agcagcagca gacacaagga aagcacccgc agcacaccta
      961 cctcggatta cacccaaaca gacacaatat tattttgaaa taaaattatt tagataaagt
     1021 gttttttggc ataaaatttt aaaaaaataa acaaaaaatc aaacagaaaa aacattaacc
     1081 tattcaaacc atctgtttta caaagaaaat acccaaaaaa agaaacatac cggctgcaag
     1141 tttcaaaccg ctacacacgc cgaaaccgca atttttcaga cggcatcatg attttaaaac
     1201 ggataaaaca catgacagca gaggaacgaa tcgcttaaaa taagcacgcg gatttgtttc
     1261 ttttttaaca tattttggat tggacacaca aatggccgac aactacgtaa tctggtttga
     1321 aaacctgcgt atgacagatg ttgaacgcgt gggcggtaaa aacgcctcgc tgggcgaaat
     1381 gatcagtcag ctgaccgaaa aaggcgttcg cgtccccggc ggctttgcca ccacagccga
     1441 tgcctaccgc gcattcctcg cacacaacgg tctgagcgaa cgcatttccg ccgcactggc
     1501 aaaattagat gtcgaagacg ttgccgaact ggcacgcgtc ggcaaagaaa tccgccaatg
     1561 gattttggac acgcccttcc ccgaacagct cgatgccgaa atcgaagcgg catggaacaa
     1621 aatggttgcc gatgccggcg gtgcggacat ttccgttgcc gtacgctctt ccgcaaccgc
     1681 cgaagacctg cccgacgcat catttgccgg ccaacaggaa accttcttga acatcaacgg
     1741 attggaaaac gttaaagaag cgatgcacca tgtattcgcc tccctgtaca acgaccgcgc
     1801 catttcctac cgcgtccaca aaggcttcga acacgacatc gtcgcccttt ccgccggcgt
     1861 tcaacgcatg gtgcgttccg acagcggcgc atcaggtgtg atgttcaccc tcgacaccga
     1921 atccggctac gatcaagtcg tctttgttac ctcctcttac ggtctgggcg aaaacgtcgt
     1981 acaaggtgcg gtcaacccgg acgaatttta tgtgttcaaa cctatgctca aagcgggcaa
     2041 gcccgccatc ctgcgcaaga ccatgggttc gaaacacatc aaaatgattt ttaccgacaa
     2101 agcagaagcc ggtaaatccg taaccaacgt cgatgtcccc gaggaagacc gcaaccgctt
     2161 ctccattacc gacgaagaaa tcactgagtt ggcgcattac gcactgacca tcgaaaaaca
     2221 ctacggccgc ccgatggaca tcgaatgggg acgcgacggc ttggacggca aactctacat
     2281 cctgcaagcc cgtcccgaaa ccgtcaaatc ccaggaagaa ggcagccgca acctgcgccg
     2341 cttcgccatc aacggcgaaa aaaccgtatt atgcgaaggc cgtgccatcg gtcagaaagt
     2401 cggacagggc aaagtacgcc tgattaaaga tgcttccgag atggattccg tcgaagccgg
     2461 cgacgtactg gttaccgaca tgaccgatcc ggattgggaa cccgtgatga aacgggcttc
     2521 cgccatcgtt accaaccgtg gcggacgcac ctgccacgcg gcgattatcg cgcgcgaact
     2581 gggcattcct gccgttgtcg gctgcggcaa tgcaaccgaa ttgctgaaaa acggtcaaga
     2641 agttaccgta tcctgtgctg aaggcgatac cggcttcatc tatgccggtc tgttggacgt
     2701 acaaattacc gatgtcgcct tggacaatat gcccaaagca cccgtcaaag tcatgatgaa
     2761 cgtcggcaac cccgaactcg cattcagctt cgccaacctg cccagcgaag gcatcggctt
     2821 ggcgcgtatg gaatttatca tcaaccgcca aatcggtatc cacccgaaag ccttgttgga
     2881 atttgacaaa caagatgacg aattaaaagc ggaaattacc cgccgtatcg ccggttacgc
     2941 gtcccctgtc gacttctacg tcgataaaat cgccgaaggc gtggcgacat tggccgcatc
     3001 ggtttatccg cgtaaaacca tcgtccgtat gtccgacttc aaatccaacg aatacgccaa
     3061 cctggtcggc ggcagcgtat acgaaccgca tgaagaaaac ccgatgttgg gcttccgtgg
     3121 tgcggcgcgt tatgtcgccg acaacttcaa agactgtttc gccttggaat gcaaagcctt
     3181 gaaacgcgtc cgcgatgaaa tggggttgac caacgttgaa atcatgattc cgttcgtccg
     3241 cactttgggc gaagccgaag ccgttgtcaa agccctgaaa gaaaacggct tggaacgcgg
     3301 caaaaacggc ctgcgcctga ttatgatgtg cgagctgccg agcaacgcgg tattggcgga
     3361 acaattcctg caatacttcg acggcttctc catcggctcg aacgacatga cccaactgac
     3421 cctcggtctc gaccgcgaca gcggcttggt atccgaatcg tttgacgaac gcaaccctgc
     3481 cgtcaaagtg atgctgcacc ttgccatctc cgcctgccgc aagcagaaca aatatgtcgg
     3541 catctgcggt caaggcccgt ccgaccatcc ggacttcgcc aaatggctgg ttgaggaagg
     3601 tatcgaaagc gtttccctga acccggatac cgtcatcgaa acttggctat atttggcgaa
     3661 tgaattgaac aaataatcaa tgcccatacc cccgagcctg aaaagcgcgg gggtattttt
     3721 ttccaagcag ctccgctcag acggcatttc ctgccgatgc cccgtccgcg ataatatttg
     3781 acacccacgc gccgactgcc tacaattccc ccttccccga gcaaccggca acggtcagct
     3841 tcttctttca gacggcatct gcctgtcttt ttcctcttca aaatacatca ttattatgca
     3901 cgtctccgaa ttacaaaccc tgcacatttc caaactctta gaattggcgg aagaacacgg
     3961 catcgaaaac gccaaccgat tccgcaaaca agacctcgta tttgccatcg tccgccaaat
     4021 gatgaaaaaa ggcgagggtt tcacctgctc cggcacgctc gaaatcctgc ccgacggctt
     4081 cggcttcctc cgcagcgcgg acacgtccta tcttgcgggc cccgacgaca tctatgtctc
     4141 gcccacccaa atccgccgct tcaacctgca tacgggcgac accatcgaag gcagcgtgcg
     4201 cgtccccaaa gacaacgaac gctattttgc cctagtcaga ctggattcca tcaacggcga
     4261 ccacccggaa gtatgccgcc ataaaatcct gtttgaaaac ctgaccccgc tgtttccgac
     4321 cgaacagttg aagctggaac gcgacttaaa gtccgaagaa aacctgaccg gacgagccat
     4381 cgatctgatt tcccccatcg gcaaaggtca gcgcgccctc ttggttgccc cgcccaaaag
     4441 cggtaaaacc gtgatgttgc aaaatattgc ccacgccgtt accgcaaact atcctgaagt
     4501 cgagctcatc gtcctcttga ttgacgagcg tcccgaagaa gtaaccgaaa tgagccgttc
     4561 cgtccgcggc gaagtggttt cctccacctt tgacgaaccg gcgcaacgcc acgtccaagt
     4621 tgccgaaatg gtgcttgaaa aagccaagcg tatggtagaa cacaaaaaag acgtggtcat
     4681 cctgctggat tcgattaccc gccttgcccg cgcctacaat accgtcgtcc ccacctcggg
     4741 caaaatcctg accggcggtg tcgatgccaa cgcgctgcac cgccccaaac gtttcttcgg
     4801 cgcagcgcgc aacgtggaag aaggcggttc gctgaccatc attgccaccg cattggttga
     4861 aaccggcagc cgtatggacg atgtgattta cgaagaattc aaaggcaccg gcaatatgga
     4921 attgcacctc gaccgccgta tggcggaaaa acgcctcttc cccgccatca acatcaacaa
     4981 atccggcacg cgccgcgaag agctgcttgt gccgaacgac cagttacaac gtatgtggct
     5041 cttacgcaag ttcctgcacc cgatggatga aatcgaagct accgagttct taaacgggaa
     5101 aatcaaagcc tctaaaaaca acgacgattt ctttgaactg atgcgcggca aataaacgcg
     5161 ccgcccgcat taatgcgaaa tgccgtctga agcctgaaaa tcgggtttca gacggcactt
     5221 tcattcacac ggtcggcgca gctcctccct ccccccgtta acggcgcaac cgtcggcagt
     5281 gtccgtgtcc gcttgccgaa agcgcggcct ttgcaaaacc ggcttgaacg catccgtacc
     5341 ggcaatgaaa accgatgcgg gaacttgatt caaggttgcg ccgaaccgcg ctcatttttg
     5401 tataaatttg gggctgtcct agataactag ggaaattcaa attaagttag agttgcccct
     5461 atgagaaaaa gtcgtctaag ccggtataaa caaaataaac tcattgaact gtttgtcgca
     5521 ggtgtaactg caagaacagc agcagagtta gtaggcgtta ataaaagtac cgcagcctat
     5581 tattttcatc gtttacgatt acttatttat caaaacagtc cacatttgga aatgtttgat
     5641 ggcgaagtag aagcagatga aagttatttt gctgaacgac aaaaccatat taatggaatt
     5701 gagaactttt ggaatcgggc aaaacgtcat ttacgcaagt ttaacggcat tcccaaagcg
     5761 cattttgagc tgtatttaaa ggggtacgaa cggcgttt
//
LOCUS       DBBZYD010000116         5660 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.116, whole genome shotgun sequence.
ACCESSION   DBBZYD010000116 DBBZYD010000000
VERSION     DBBZYD010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5660
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.116"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            98..814
                     /locus_tag="ACJJDL_001866"
     CDS             98..814
                     /locus_tag="ACJJDL_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HGG7574525.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            963..1865
                     /locus_tag="ACJJDL_001867"
     CDS             963..1865
                     /locus_tag="ACJJDL_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HGG7574526.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGTNLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFASGKLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIALLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1908..2681
                     /locus_tag="ACJJDL_001868"
     CDS             1908..2681
                     /locus_tag="ACJJDL_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HGG7574527.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EDAGSLKRHHGGASSGGNLPEGLPASRQIQCQNEKNAIARLIAEHIPDESSLFVSIGT
                     TVEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2793..4481
                     /locus_tag="ACJJDL_001869"
     CDS             2793..4481
                     /locus_tag="ACJJDL_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HGG7574528.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVLELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4574..5530
                     /gene="gshB"
                     /locus_tag="ACJJDL_001870"
     CDS             4574..5530
                     /gene="gshB"
                     /locus_tag="ACJJDL_001870"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HGG7574529.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSSGLSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQSMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELSERDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1313 a         1546 c         1560 g         1241 t
ORIGIN      
        1 aatttgtgta atactttgat ttccccgaca cgatttgaag cacagccgcc ttaaaacatc
       61 ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg aactttgaaa acgacgacat
      121 tatccatgcg ccgaccacgt cttccttgat tctcgaagag cggcacgatt cggagctgtt
      181 ccgtgtttac gccctgattt tggacggcat taccgatcag gtgctgctgc ccggcaaaaa
      241 gctgaccgaa tccgaacttt gccgccagat ggtgtgttcg cgcaacaccg tccgcggcgc
      301 gttgtcgctt ttggcgcacg acaagattgt cgatttgcaa cccaacaggg gcgcgttcgt
      361 ccacgttccc gatttgaaag aaatgcagga tgtgttcaat gcgcgcatcg aaatggagac
      421 gatgattttg aatatcctcg cagatttgcc ggatttggaa acgcgcctca agccgcttta
      481 tgcgatgata cggcgcgaag aagaggcctc cggcagggga gaccgcgttg gctggaaccg
      541 cctgtccaat gccttccacg tcgaactggc gcgcctggtg ggcaacgatg tgctgttcga
      601 cattatgaac acgctgtgcg cgcggtcttc cctgattgtc gccgtggcgg gcgtgcatcg
      661 cgaggaaaaa cacgccatca atacgcatac gcattccgaa caccgcgaaa tcctcgacct
      721 gctgctggcg ggcaggcgca accgcgtggt caaaatcctg cgccgccatt tgggcaactg
      781 tatggagcgt ttggaaaaga ctttggaaga ttgaatgccg gagcggataa gccgcctgaa
      841 ccttcaggcg gttttttaat ggcgaacctg atgccgtctg aaatatggat gcgggtatct
      901 gcaattttca gacggcaatt tttaaaccgc atatatcatg cggcaataaa ggaggtcagg
      961 agatggacag cctgatgacg ttgctttcgg tattgatacc gatgtttgcc ggatttttta
     1021 tccgtgtgcc caagccttac ctgcccgctt tggataaggt gctatcggtc ttggtgtatg
     1081 ctgtgctgct gctgatcggc gtctcgttgt cgcgcgtgga ggatttgggt tcgcggttgg
     1141 acgatatggc gttgacggtt ctgtggctgt ttgtttgtac ggtcgggacg aacctgcttg
     1201 ctttggcagt gttgggaaag ttattcccgt ggcggataaa ggggaaaggg aagggcgttt
     1261 cggtcggtgt gtcgggcagt gtggggcagc tcggatgcgt gctgctcgga tttgcatccg
     1321 gcaaactgat gcgcgatatt tggatgccgt ctgaaaacgc gggtatgtat tgtctgatgc
     1381 tgctggtgct cctcatcggc gtacagctca aaagcagcgg cgtatcgttg cggcaggttt
     1441 tggtcaaccg caggggtatt cggttgtcgg tctggtttat gctttcatct ctttcaggcg
     1501 ggctgctgtt tgccgcatcg gcagacggtg tgtcgtgggt gaaaggtttg gcgatggctt
     1561 ccggcttcgg ttggtattcc ctctcgggtt tggtgatgac cgaggcttac ggcgcggtat
     1621 ggggcagtat cgcgcttttg aacgatttgg cacgagagct gttcgcgctg gcatttattc
     1681 cgctgctgat gaagcgtttt cccgatgcgg cagtgggggt cggcggcgcg accagtatgg
     1741 atttcacatt gcccgtgatt cggggtgcgg gcggcttgga agccgtaccg gtagcggtca
     1801 gcttcggcgt ggtggtcaat atcgccgctc cgtttctgat ggtggtgttt tccgctttgg
     1861 gctgaacgcg gtaaaatcgg catcccgatg caaggaggca gaaaacgatg aaaccgaaaa
     1921 tccaaaggca cggagagatt ttaagccttg tccgccggca tcagtttatg tcggtggacg
     1981 agcttgccgc cgcattggac gttaccccgc agacgatacg ccgcgacatc cgcgaattgg
     2041 aggatgctgg cagcctgaaa cgccaccacg gcggcgcatc ctcgggcgga aacttgccgg
     2101 aggggctgcc tgccagccgc caaattcaat gtcaaaacga aaaaaacgcc attgcccggc
     2161 tgattgcgga acatattccc gacgagtcat cgctgtttgt cagtatcggc acgacggtgg
     2221 aagccgtggc atcggagctg gtgagacggc gcggcagcct gcggattatt accaacaata
     2281 tccacgtcgc ctccatcgtt tcggcgcgga cggattacac ggtcatcatc acttccggag
     2341 tcgtccgccc tttggacggc ggcattaccg gcgtggcaac cgtcgatttt atcaaccagt
     2401 tcaaagtcga ttatgccgtg atgagtacgc acggcgtgga aagcgacggt tcgcttttgg
     2461 acgacgacta caaagaagtc agcgtgatgc aggcgatgat tgccaacgcg cgcgtccgct
     2521 tcctcggcgt ggaccacagt aaattccgca gcaacgcgct ggtcaggctc ggcgacatta
     2581 cggcgtttga caaagtattt accgaccggc tgcccgatac cgcgatgcag aagatgctga
     2641 aagaggcggg ggtggaatgc ctgattgccg atgccgtctg aacgctatgt caaagcgcgc
     2701 aagtcgggta caataaacac atcatcaaac cgcttcagac ggcataagga accgccccaa
     2761 tgccgtctga agccatctgt tcaaagaaaa ctatgctcaa taaagaccaa tttgcggaca
     2821 accattttat ccgcaccttc atcgaagaag acctcaaaag cggcaaacac gaaaccatcc
     2881 aaacccgttt tccgccggag cccaacggct acctgcacat cggacacgcc aaatccatct
     2941 gcctgaactt cggtttggcg tatatttacg acggcttgtg caacctgcgt tttgacgata
     3001 ccaaccccga aaaagaaaac gacgaatacg tcaacgccat caaagaagac gttgagtggc
     3061 tcggtttcca ttgggcgggc gagccgcgtt tcgcttccaa ctatttcgac cagctttatg
     3121 actacgccgt cggtttggtt aaagacggca aagcgtatgt cgatgatttg acgccagaag
     3181 aaatgcgcga ataccgcggt acgctgaccg aagcaggcaa aaacagccct tatcgcgacc
     3241 gcagtatcga agaaaacctc gacctgttca cgcgcatgaa aaacggtgag ttccccgacg
     3301 gcagcaaaac cctgcgcctg aaaatcgaca tggcatccgg caacatcaat atgcgcgatc
     3361 cggtcatcta ccgcatccgc cgcgcccatc accacaacac cggcgacaaa tggtgcatct
     3421 atccgatgta cgactacacg cattgtattt ccgatgccat cgaaggcatc acgcattcct
     3481 tgtgtacgct tgagtttgaa gcccatcgtc cgctgtatga ctgggtgttg gacaacatcc
     3541 ccgcgccgca cgccacacgt ccgcgccaat acgagttttc acgcttggag cttttgtaca
     3601 ccattacctc caaacggaaa ttgaatcagt tggttgtgga aaaacacgtt tccggctggg
     3661 acgatccgcg tatgccgacc atttccggta tgcgccgacg cggctacacg cccgaagggc
     3721 tgcgcctgtt tgccaaacgc gccggtattt ccaaatctga aaacatcgtc gatatgagcg
     3781 tgttggaagg cgcgattcgc gaagagttgg aaaattccgc cccacgcctg atggcggtgt
     3841 tgaacccgct caaagtaacc ctgaccaact ttgaaaccgg cagaacccaa agccgccgtg
     3901 ccgcgttcca tccgaaccac gaagaaatgg gcgatcgcga agtacctgtt tcacaaacca
     3961 tttacatcga agccgacgac tttgccgaaa atccgcccaa aggcttcaaa cgcctgattc
     4021 ccggcggcga agtacgcttg cgccacggct atgtcatcaa gtgcgatgaa gtcgtcaaag
     4081 acgaagcagg caatgtgctt gaactcaaat gcagcatcga ccacgacacc ttgggcaaaa
     4141 atccagaagg ccgtaaagtt aaaggcgtga ttcattgggt ttccgccgaa cacgccgccg
     4201 aaatcaaagt ccgtctgtac gaccgcctct ttaccgtcga gcgtcccgat gccgtgcgcg
     4261 gcgaagacgg cgaatacctg ccgttcaccg atttcctcaa tccggaatcc gtcaaggaaa
     4321 tcaccgccta cgccgaacct gccgccaaag atttgccggc agaaagccgt tggcagttcg
     4381 agcgtatcgg ctacttcgta accgaccgta aagaccacgg caaagacacg ccggtgttta
     4441 accgcacggt cacgctgaaa gattcttggc agcctaagta aaaccccatc cttgccgtct
     4501 gaatattgtt cggacggcat ttcccctttg cccgcgaaat gcggcacatt cggcacaccg
     4561 gaaaggaaat atgatgaaag tcctctttat cgccgacccg atggcaagtt tcaaaaccta
     4621 caaagacacc acctacgcca tgatgcgcga gatggcaaaa cgcggctggc ggctgtttca
     4681 taccttgagc agcggattgt cggttaaaaa cggtctggtg gttgctgatg cgtctgcttt
     4741 tgagtttctc ggcgcacaag acgaccacga caaaaactgg tttgccgccg ccgacaaagt
     4801 tcagacggca ttgaaagcat ttgatgccgt gattatgcgt accgatccgc cgttcgatat
     4861 gcaatacctc tacgccacac agcttctgac gctggcggag cagcagggcg cgaaggtctt
     4921 taacagcgga cagtcgatgc gtgacttcaa tgaaaaactg gcgattttga acttcagccg
     4981 ctttaccgcg cccacgctgg taacgacccg ttccgccgat gtccgcgcat ttttgaaaga
     5041 acacggcgac atcatcatta aaccgctcga cggcatgggc ggtatgggca tcttccgcct
     5101 gaccgaaaaa gaccccaaca tcggcagcat cctcgaaacc ctgatgcagc ttgattcccg
     5161 caccattatg gcgcaacgct acattcccga aatcgtacac ggtgacaaac gcatcctgat
     5221 tatcggcggc gaagtcgtcc cctatgcttt ggcgcgtatt cctcaaaacg gcgaaacacg
     5281 cggcaacctt gcggcaggcg ggcgcggcgt ggcgcaggaa ttgagcgaac gcgaccgcga
     5341 aattgccgaa acgctcgccc ccgaactcaa acggcgcggc atcctgctgg ccggtttgga
     5401 cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc ccgaccggat tccaagaaat
     5461 tatgaaacaa aaaggcttcg atgtggcggc aatgtttgcc gatgccgttg ccgcgtggtc
     5521 ggtacgttaa accgatgccg tctgaaaggc ttttgcttca caaccgcctg gtttgatcgg
     5581 gcaggcaggg ttttccctca gtcggcagag atacgcttaa taccgtacgg acaccccgcc
     5641 gccccgtttt cagacggcat
//
LOCUS       DBBZYD010000117         5616 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.117, whole genome shotgun sequence.
ACCESSION   DBBZYD010000117 DBBZYD010000000
VERSION     DBBZYD010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5616
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.117"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(389..1189)
                     /locus_tag="ACJJDL_001871"
     CDS             complement(389..1189)
                     /locus_tag="ACJJDL_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HGG7574530.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTMAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(1325..1828)
                     /locus_tag="ACJJDL_001872"
     CDS             complement(1325..1828)
                     /locus_tag="ACJJDL_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574531.1"
                     /translation="MDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLM
                     KIIHTYTILYILIAVIGIINGFLLRSKVLSIVKNKQKFLSDMFPLEMPFFFVEYKIPI
                     LARFLNRGMKWLYLPSFFCLVAICFSIYILNEEGGWMPYFACYWFGLCYPVSTYYVFL
                     SRDYKHI"
     gene            complement(2165..2806)
                     /locus_tag="ACJJDL_001873"
     CDS             complement(2165..2806)
                     /locus_tag="ACJJDL_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HGG7574532.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMTMSEKSGVPLYFDRAL"
     gene            3134..5347
                     /locus_tag="ACJJDL_001874"
     CDS             3134..5347
                     /locus_tag="ACJJDL_001874"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG7574533.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKKLVLAARSLA
                     EAHYPADAVTPYGEPLSDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LTFDGLFDIRAVRILVDTIPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT         1680 a         1436 c         1142 g         1358 t
ORIGIN      
        1 ctcttttggg cttattcaaa ttagggacac gccctagaac caagttgcat gataatacct
       61 ttcattaact gaaacactga ttaagaaact ccagtctgtc taatgatgag gttttcacat
      121 cgccaaaact tgccaatcaa atgctggatt tattgccgtc tgagatttgg tcaaatccaa
      181 aggcgacatt cttagaccct gtgtgtaaat caggggtatt tttgcgtgaa atcgtcaaac
      241 gcttggatga aggcttgacc aatcaaatac cagataaaca aactcgcatt aaccacattt
      301 taaaaaatca agtttttgga agtactgcca cgtatgtagg tagctttgac cgatatttgc
      361 ataaaaactc ctttgctggt gaaaggaatt attttgccaa ttttaaaata tttctggcac
      421 caaatagtac aatgacaaag acaatcatgc caatgattaa atcaggatag ctagaatgag
      481 tcaataacgt caatgctccc gccgctatca caccgatatt gatgataatg tcattggatg
      541 taaaaatcat gctggctttg atatggattt ctttattttg atttttgctc agtagatata
      601 agcacagcca gtttgcaatc aatgccaaaa atgccgtgcc aatcatcagt tgataattgg
      661 gcagctgctc agcaccgata aaacgcctaa tcacttctat caccccaaat aacgccaata
      721 ttatctgcgt tatccccgcc aaaaatgcca cacgtttttt atacgccatc gtcataccaa
      781 tggctgatag cgccaatata tagacaaagc tgtccgccag catatctaga ctatcagcaa
      841 tcagccccat agaattagca aaaataccaa ccgaacactc tatgataaaa aacacaaagt
      901 taatcatgag cacttgatat aataatcttt tttctaagtg ctcatcaggc ttgttaaaca
      961 ctatcttatc aacaatcact tcggtggaaa tgatatgact atcaaaatta agcggttcaa
     1021 gtacttgtaa aatcgttgta tcttgattat cgtgatagac ggttaagcac cgcccagcaa
     1081 tatcaaactg taattcataa atatcagaca catcttttaa acgcatgcga atgagctgtt
     1141 cttcggacgg gcagtccatt ttggtaatgt taaaaatggt ctttttcatc tatttagttc
     1201 cttgttttga tcaggttggc tcaaataaat ctgtgtttat attgctgctt ggtaattttt
     1261 ggatggtttg agtaaattga ttaggttaaa atttaccttt ggaagtaccg ccacgcataa
     1321 tagtttagat atgtttataa tctctggata aaaaaacgta ataagtgctt actggataac
     1381 aaagtccaaa ccaatagcag gcaaaataag gcatccaccc cccttcttca ttaaggatat
     1441 atattgagaa acaaatcgca actaaacaga aaaaacttgg gagataaagc catttcattc
     1501 ccctattcaa gaatctagcc aagataggta ttttgtattc tacaaaaaag aaaggcattt
     1561 ccaagggaaa catgtcagat aaaaactttt gtttattttt tactatagat agaaccttgc
     1621 ttctcaagag aaagccatta ataataccga tgacagctat taatatatag agaatagtat
     1681 aagtatgaat aatcttcatt agacaaaaag aagaaatggc agataaatta catacgatat
     1741 attggaatat aaaatattta cggtctaaac cttgttcagt tgcaattttt ttaaaattgc
     1801 cttgcataaa aaaatcaaag gcgtccatta aactatcttt cacattagaa atttaaaagc
     1861 taaataatac gacaaacaat gtgaagtact attcatggtt tatttaaaaa ataatactat
     1921 tctgaacatt atttagatac agaaattaac aaattagaac taaacaagct tttaaatact
     1981 ttaattttat tggaaagcta taaaaggaac tataacttta cacactagtc acttcttttt
     2041 aagaggcaaa agggattggg aaggtcgtct tggagataag cactggtatt tcggccaatg
     2101 gtaaatagag tttacctcaa atagggtaga acctccttca tctgtcagtt aataacagcc
     2161 acttttacaa tgccctgtca aaataaagcg gcacgcccga tttttcactc atcgtcatca
     2221 aataacccat caccttttgg ggccattcga tgccgcgcac cacggtcaga ttcctcaaaa
     2281 cggggaaaac caaaatatcc tccataccga ttccgccgtt gatgccgtct gaagcaccgt
     2341 ccatcaaatt ttccaactct tgcaaatctg cgtttatgcg ttcgagatat tgggcggttt
     2401 tattcaaatt ggcggaaaag ctgccgatgc ttttctcttt tttgtctgta aaatatttta
     2461 ccgcttccgg cgttgcaaat tcgggcagcc cgattttgat cacgcgcggc tgcaccagtt
     2521 tgtcgttgta tccgcccacc ttgtccagcc acgcccgtat ctcggggcgg acttcgtctt
     2581 tcagacggtc ttcgcggtcg aaatgccgca caatgtccaa actctcgccc ataaacgaac
     2641 cgtcttcttt ttgcaggacg ggcacttgtt tcgcaccgat cataccgatc ggcgttgcct
     2701 cgtcgtcgtt tgccagcacg gcttcttcaa cgtccgcgcc aaacagcccg gcagccatcc
     2761 gcgcacgcac acaaaacggg caatggtcgt aaatatacag tttcatcaaa atattcctcg
     2821 tcaacctgtc ggtaccggct accttaacac cccgcgccac ccgaaacaag tttatcttcc
     2881 cgcctatgca ccgtaaataa ataagctgag acctttgcaa aaatagtctg ttaacgaaat
     2941 ttgacgcata aaaatgcgcc aaaaaatttt caattgccta aaaccttcct aatattgagc
     3001 aaaaagtagg aaaaatcaga aaagttttgc attttgaaaa tgagattgag cataaaattt
     3061 tagtaaccta tgttattgca aaggtctcaa gctgttacaa taaactcgtt tttatcggaa
     3121 cgaaagaccc atcatgaccg ccatcagccc gattcaagac acgcaaagcg cgactctgca
     3181 agaattgcgc gaatggttcg acagctactg cgccgcgctg ccggacaacg ataaaaaact
     3241 tgtcttagcc gcccgttcgc tggcggaagc acattacccc gccgatgccg tcacgccgta
     3301 tggcgagccg ttgtccgacc acttcctcgg cgcggcacaa atggtcgacg aactcgacct
     3361 gctgcccgat gccgtcgccg ccaccctgct tgccgacatc ggacgctacg tccccgattg
     3421 gaatctattg gtttccgaac gctgcaacag caccgtcgcc gagctggtca aaggtgtgga
     3481 cgaagtgcag aaactcaccc acttcgcccg ggtggacagc ctcgccacgc cggaagaacg
     3541 cgcccagcaa gcggaaacca tgcggaaaat gctgctggcg atggttaccg acatccgcgt
     3601 cgtgttaatc aaactggcga tgcgtacgcg caccctgcaa tttttaagca acgcccccga
     3661 cagccccgaa aaacgcgccg ttgccaaaga aaccctcgac atcttcgccc cgctcgccaa
     3721 ccgtttgggc gtgtggcagc tcaaatggca gctcgaagat ttgggcttcc gccatcaaga
     3781 acccgaaaaa taccgcgaaa ttgccctgct tttggacgaa aaacgcaccg aacgcctcga
     3841 atacatcgaa aacttcctca atatcctgcg tacggaactg aaaaaataca atattcattt
     3901 tgaagttgcc ggaagaccga agcacatcta ctccatttac aaaaaaatgg tgaagaaaaa
     3961 gctcactttc gacggcttgt tcgacatccg cgccgtacgg attttggtgg acaccattcc
     4021 cgagtgttat accacgctgg gcattgtcca cagcctctgg cagccgattc cgggcgagtt
     4081 cgacgactac atcgccaacc cgaaaggcaa cggctataaa agtttgcaca ccgttatcgt
     4141 cggcccggaa gacaaaggcg tggaagtgca aatccgcacc ttcgatatgc accaattcaa
     4201 cgaatttggt gttgccgccc actggcgtta taaagagggc ggcaaaggcg attccgccta
     4261 cgaacagaaa atcgcttggt tgcgccaact cttggactgg cgcgaaaaca tggcggaaag
     4321 cggcaaggaa gacctcgccg ccgccttcaa aaccgagctt ttcaacgaca cgatttatgt
     4381 cctgaccccg cacggcaaag tcctctccct gcccacgggc gcgaccccca tcgacttcgc
     4441 ctacgccctg cacagcagca tcggcgaccg ttgccgcggt gcgaaagtcg aagggcagat
     4501 tgtgccgctg tccaccccgc tcgaaaacgg acagcgcgtc gaaatcatta ccgccaaaga
     4561 agggcatcct tccgtcaact ggctttacga aggctgggtc aaatccaaca aggcaatcgg
     4621 caaaatccgc gcctacatcc gccagcaaaa cgccgacacc gtgcgcgaag aaggccgcgt
     4681 ccaactcgac aaacagcttg ccaaactcac gcccaaaccc aacctgcaag agcttgccga
     4741 aaatctcggc tacaaaaagc cagaagacct ctacaccgcc gtcggacaag gcgaaatttc
     4801 caaccgcgcc atccaaaaag cctgcggcac gctgaacgaa ccgccgcccg tacccgtcag
     4861 cgaaaccacc atcgtcaaac agtccaaaat caaaaaaggc ggcaaaaacg gcgtgctcat
     4921 cgacggcgaa gacggtctga tgaccacgct tgccaaatgc tgcaaacccg cgccgcccga
     4981 cgacattgtc ggcttcgtta cccgcgatcg cggcatttcg gtacaccgca aaacctgccc
     5041 ctctttccga cacctcgccg aacacgcgcc cgaaaaagta ctggacgcaa gttgggcggc
     5101 gttgcaggaa ggacaagtgt tcgccgtcga tatcgaaatc cgcgcccaag accgctccgg
     5161 gcttttgcgc gacgtatccg acgcgctcgc ccgccacaaa ctcaacgtta ccgccgtgca
     5221 aacccagtcc cgcgacttgg aagccagtat gcggttcacg ctcgaagtca aacaggtcaa
     5281 cgacctcccg cgcgtcctcg ccagcctcgg cgacgtcaaa ggcgtattga gcgttacccg
     5341 gctttaaata caaaaatgcc gtctgaaagc cgtataacgc ttcagacggc attttgattg
     5401 acggggtttg ctattttttg ttgcatagtc aattaaaaac aaaatagtac aatactcaac
     5461 tttgaaggtc taaccatggc atactctgcg gacttaagaa acaaagcttt aaactatagt
     5521 ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag
     5581 gcgaggcaac accgtactgg tttaaattta atccac
//
LOCUS       DBBZYD010000118         5553 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.118, whole genome shotgun sequence.
ACCESSION   DBBZYD010000118 DBBZYD010000000
VERSION     DBBZYD010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5553
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.118"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            70..543
                     /locus_tag="ACJJDL_001875"
     CDS             70..543
                     /locus_tag="ACJJDL_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HGG7574534.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVEGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMPAMNHGHHHGEAHQH"
     gene            669..1772
                     /gene="mnmA"
                     /locus_tag="ACJJDL_001876"
     CDS             669..1772
                     /gene="mnmA"
                     /locus_tag="ACJJDL_001876"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HGG7574535.1"
                     /translation="MNTTANTTNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQSTDKPVIITR"
     gene            1843..3513
                     /locus_tag="ACJJDL_001877"
     CDS             1843..3513
                     /locus_tag="ACJJDL_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HGG7574536.1"
                     /translation="MEKIWLDSYEQGVNAEIDITQYGSVSDVFCQSVKKFAGQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFVIRKIKKMVPEYRIRETISFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIVLITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITDTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVRGPQVMKGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLIVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVRKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            3625..5259
                     /locus_tag="ACJJDL_001878"
     CDS             3625..5259
                     /locus_tag="ACJJDL_001878"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HGG7574537.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGVHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     TGSLAAKIYGSGHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         1468 a         1513 c         1397 g         1175 t
ORIGIN      
        1 gtactggttt ttgttaatcc gctataagat taagcacatt ccccgtctga tattataagg
       61 agcagaaaga tgaaaaaatt attggcggcc gtgatgatgg caggtttggc aggcgcggtt
      121 tccgccgccg gagtccacgt tgaggacggc tgggcgcgca ccaccgtcga aggtatgaaa
      181 ataggcggcg cgttcatgaa aatccacaac gacgaagcca aacaagactt tttgctcggc
      241 ggaagcagcc ccgttgccga ccgcgtcgaa gtgcataccc acatcaacga caacggcgtg
      301 atgcggatgc gcgaagtcga aggcggcgtg cctttggagg cgaaatccgt taccgaactc
      361 aagcccggca gctatcacgt gatgtttatg ggtttgaaaa aacaattaaa agagggcgac
      421 aagattcccg ttaccctgaa atttaaaaac gccaaagcgc aaaccgtcca actggaagtc
      481 aaaatcgcgc cgatgccggc aatgaaccac ggtcatcacc acggcgaagc gcatcagcac
      541 taatctgctg aaaatgtttg aaatgccgtc tgaaaaagcc cgggctttca gacggcattt
      601 ttatgaccgc ctttaaaatg tgttaaaatc tgcctttaaa aaccgccgtt tccaaccata
      661 ttctacgcat gaatacgaca gcaaacacca ccaatatcat cgtcgggctc tccggcggtg
      721 tcgattcttc cgtaaccgcc gccctgctca agcagcaggg ttatcaagtg cgcggtgtgt
      781 tcatgcagaa ctgggaagac gacgacaacg acgaatattg cagcatcaaa caggattcgt
      841 tcgatgccat cgccgttgcc gatattatcg gcatcgatat cgacatcgtt aatttcgccg
      901 cgcaatataa agacaaagtc tttgcttatt ttcttcagga atacagtgcg gggcgcacgc
      961 cgaatccgga tgtgttgtgc aacgccgaaa tcaaattcaa atgctttttg gactacgccg
     1021 tagggcaggg cgcggatacc atcgccaccg gccactatgc gcgcaaagaa gttcgcaacg
     1081 gcgtgcatta cctgctcaaa ggtttggatc gaaacaaaga ccaaagctat ttcctctacc
     1141 gcctcaagcc tttccaactc gaacgcgcga tttttccgtt gggcggtttg gaaaaacccg
     1201 aagtgcgccg ccttgccgcc gagttcaaac tgccgaccgc cgccaaaaaa gacagcacgg
     1261 gcatctgctt catcggtgaa cgcccgtttc gcgagtttct gcaaaaatac ctgccgaccg
     1321 acaacggtaa aatggttacg cccgaaggga aaaccgtcgg cgaacacgtc gggctgatgt
     1381 tctacacgct cggacagcgc aaaggtttgg gcatcggcgg cgcgggcgaa ccgtggtttg
     1441 ttgcggctaa agatttgacg aaaaacgaac tgattgtcgt gcaaggacac gaccatccgc
     1501 tgctctatac ccgcagcctt gtgatgaacg atttgagttt cacgcttccc gaacgcccga
     1561 aggcaggacg ctatacctgc aaaacgcgtt accgtatggc ggacgcgcct tgtgagttgc
     1621 gctatttgga tgaagaaacc gccgagctgg tgtttgacga accgcaatgg gcggttacgc
     1681 cgggccagtc tgccgtgctg tacgacggcg acatctgttt gggcggcggc attatccaat
     1741 caaccgacaa acccgtcatc atcacacgat aaaggtaatg ccgtctgaaa cggttttcag
     1801 acggcattgt tccgctcaat tccactttaa agaccgatac ctatggaaaa aatctggtta
     1861 gacagttacg aacagggcgt gaatgccgaa atcgacatca cgcaatacgg ttccgtcagc
     1921 gatgtatttt gccaaagtgt caagaaattt gccggccaac ctgcttttca aaacatgggc
     1981 aagacgctga cttatgccga aaccggcaaa ctggcaacag attttgcttc ttatctgcaa
     2041 aacgtcctga agctgccgcg cggcgaacgt gttgccatta tgctgcccaa cgtattgcaa
     2101 tacccgattg cccttttcgg cattttgcag gcaggtttgg tagcggtgaa caccaatccg
     2161 ctctataccc cgcgcgagct ggagcatcag ttgaaagaca gcggcgcgac cgccatcatc
     2221 gttttggaaa atttcgccaa cacgctggag ctggtgctgc cgcgcacgca gatcaaacac
     2281 gtcatcgtag cctccgtcgg cgaaatgttc gggctgctta aaggttcgct gatcaatttc
     2341 gtcatccgga aaatcaagaa aatggtgccc gaataccgta ttcgggaaac catttccttt
     2401 cagacggcat tgaaagaggg ggcgaagcac gttttccaac ctgtcgcatt aaaccgcgaa
     2461 gataccgcgc tgttgcaata cacgggcggc acgacaggtg ttgccaaagg ggcggtgctg
     2521 agccacggca acatctgcgc caatatgctt caggcaaaag aatggattaa aaaccagttg
     2581 cgtgagggaa aagaaaccgt tatcgccgcc ttgccgctgt accatatttt tgccttaacc
     2641 gtgaatctga tgatttttgc caatgccggc tcgaaaattg tcctgattac caacccgcgc
     2701 gatatgaaag gctttatcgg agaactgaaa aaacagcggg ttaatgtatt tatcggcgtg
     2761 aacacgctgt ttaacgcgat ggttaaccgt cctgattttg ccgaagtcga tttttcagga
     2821 ttgcggctga ctttgggcgg cggtatggcg acccaaaaag ccgttgccga aaaatggaaa
     2881 aaaatcaccg acacgcccat cgtcgaagcc tacggtctga ccgaagccag ccccggcgtg
     2941 tgctgcaacc ccttaaacat cgaatcatac agcggcagca tcggtttgcc cgtctcgtcc
     3001 accgaagtcg aactgcgcga cgcaaacggc aaagaagtcc ccgtcgggca gccgggcgaa
     3061 ttgtgggtgc gcggcccgca agtcatgaaa ggctattgga accgtcccga agaaaccgct
     3121 aaagccatag acgcgcgcgg tttcttggaa accggcgata ttgccgtcat ggacgaaaaa
     3181 ggctggttga agctggttga ccgtaagaaa gacctcattg ttgtttctgg ttttaatgtt
     3241 tatccgaacg aaatcgagga agtcatcgcg catcacggca aagtgatgga agtcgcctgt
     3301 atcggcgttc ccgacgaaaa aaccggagaa gctctcaaag tgtttgtcgt cagaaaagat
     3361 ccgtctttga cgaaagaaga acttatcgcc ttttgccgca ccgaattaac cgcatataaa
     3421 gtaccgaaaa atatcgaatt ccgcgacgag ttgcccaagt ccaacgtcgg caaaatcctg
     3481 cgccgcgagt tgcggcaaag tactgggaaa taaagaaaag atgccgtctg aaaacagccg
     3541 tccaccgttc agacggcatc cgtccgtttg ccagaaccgc gcgcttcaag ttaaaatcgc
     3601 acattccaac atgggtattc catcatgacc aaattcattt tcgtaaccgg cggcgttgtc
     3661 tcctcactgg gtaaaggtat cgccgccgct tctattgccg ctatcctcga atcgcgcggc
     3721 ttgaacgtta ccatgctcaa gcttgatcct tatatcaacg tcgatcccgg cacgatgagc
     3781 ccgtttcaac acggcgaagt gttcgtaacc gacgacggcg cggaaaccga cctcgactta
     3841 ggacactacg aacggtttat cgattccacg atgacccgcc gcaacagctt cagcacgggg
     3901 caggtgtacg aaaacgtcat cgccaaagaa cgacggggcg actacctcgg cggcacggtt
     3961 caagtcatcc cgcacattac cgacgaaatc aaacgccgca tccacgaagg cgcggcaggt
     4021 tacgatgtgg cgattgtcga aatcggcggc acggtcggcg acatcgaatc gctgccgttt
     4081 ttggaagcca tccgccagat gcgaagccag ttgggacgca acaacaccct gttcgcccac
     4141 ttgagctacg tcccctacat cgccgctgca ggcgaaatca aaaccaagcc gacccagcac
     4201 accgttaaag aaatgttgag catcggtttg caacccgaca tcctgatttg ccgtatggac
     4261 aggacaatgc ctgcggacga acgccgcaaa atcgccttgt tctgcaacgt ggaagaacgc
     4321 gcgattgtcg gcagctacga tgtggacagc atctacgaat gccccgaaat gctgcacgac
     4381 caaggcatcg acaacatcat taccgagcag ttgcagctta atgtgcagca ggcggatttg
     4441 accgcgtgga aaaaaatcgt ccacgccatc caaaacccga aacacaccgt caaaatcgcc
     4501 atggtcggca aatacgtcga tttgaccgaa tcctacaaat cactgattga agccttgaaa
     4561 cacgcaggtg ttcacaccga aaccgacgta caaattacct ttgttgacag cgaaagcatc
     4621 gagaaaaaca acggcgacgt ttctatgctc aaagatatgg acgccatcct cgttcccggc
     4681 ggtttcggtt cgcgcggcgt ggaaggcaaa atcgccgctg tgcgctatgc ccgcgaaaac
     4741 aacgtgccat acttgggcat ctgcctcggt atgcagattg cgctgatcga atacgcccgc
     4801 gacgtggcag gtttgaaagg tgcgaattcc accgagttcg acctcaaatg cgccgccccc
     4861 gtcgttgccc tgattgacga atggcaaact gccgacggca gcgtcgaaac ccgcgacgaa
     4921 tccgccgatt tgggcggcac catgcgtttg ggcgcgcaag aagtcgaatt gaaaacaggc
     4981 agcctcgccg ccaaaatcta cggcagcgga cacatccgcg aacgccaccg ccaccgctac
     5041 gaagtcaaca acaactatgt tcctacgctg gaacaggcag gtttggtcat cggcggcgta
     5101 tccgccggac gcgaacgctt ggtcgaaacc atcgaactgc cgaaccatcc ttggttcttc
     5161 gcctgccagt tccaccccga gtttacctcc aatccgcgca aagggcatcc tttgttcacc
     5221 gcgtttgtca aagctgcgtt gaacaataaa aaagcctgat aaagcgttac ttgatgatca
     5281 aaatgccgtc tgaaagcctg aatgaagact ttcagacggc attttcgcaa atcggggatt
     5341 ataaaagcca tcaatttaat ttttatggtt ttatctaata tttaccaact gaatattgtt
     5401 aagcggggcg tgaaactcaa gttgagacct ttgcaaaatt ccccaaaatc ccctaaattc
     5461 ccaccaagac atttaggagc accttcttcc ggcaaaccgc ccaagccatg attgccaaac
     5521 acatcgaccg tttcccgcta ttgaagttgg acc
//
LOCUS       DBBZYD010000119         5429 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.119, whole genome shotgun sequence.
ACCESSION   DBBZYD010000119 DBBZYD010000000
VERSION     DBBZYD010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.119"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            198..2342
                     /locus_tag="ACJJDL_001879"
     CDS             198..2342
                     /locus_tag="ACJJDL_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7574538.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGGSFDLDSVDTEAPRPAPK
                     YQDVSSEKPKAQKDQGGYGFAMRLKRRNWYPQAKEDEVKLNESDWETTGLPTEPKKLP
                     LKQESVISKVQANNGDNNIYTSPYLTPSNHPNGNTGNGINQPKNEVKDYKDFKYVYSG
                     WFYKHARNEIIRENSSIKGAKNGDDGYIFYHGKEPSRQLPASGTVTYKGVWHFATDVK
                     KSQNFRDIIQPSKKQGDRYSGFSGDDGEEYSNKNEATLRSGQEGYGFTSNLEVDFNNK
                     KLTGKLIRNNANTGNNQATTQYYSLEAQVTGNRFNGKAMATDKPGNGETKQHPFVSDS
                     SSLSGGFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKDANGNTEAASGGTGAAASGGA
                     ADMPSENGKLTTVLDAVELTHGGTAIKNLDNFSNAAQLVVDGIMIPLLPKDSESGNNQ
                     ANQGTNGGTAFTRKFAHTPNSDEKDTQAGTAENGNPAASNTAGDTNGKTKTYEVEVCC
                     SNLNYLKYGLLTRKTAGNTGEGGNGSQTAAQTAQGAQSMFLQGERTDENKIPSEQNVV
                     YRGSWYGHIANSTSTSWSGNASNATSGNRADFTVNFGEKKITGTLTAENRQAATFTIE
                     GMIQGNGFEGTAKTGDGGFALDPKNTEASHKASINATVTGGFYGPKAEEMGGWFAYPG
                     DSQAQPSASGSGTSAANSATVVFGAKRQQLVQ"
     gene            2429..5176
                     /gene="tbpA"
                     /locus_tag="ACJJDL_001880"
     CDS             2429..5176
                     /gene="tbpA"
                     /locus_tag="ACJJDL_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HGG7574539.1"
                     /translation="MQQQHLFRLNILCLSLMTALPVYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKTGGLTQSIALAGRIGGAEA
                     LLIHTSRRAGEIRAHEAAGRGVQSFNRLVPVEDDHQYAHFVVEEECESRNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLSDPLSYESRSWLFRPGFRFENKRHYIGGILERT
                     QQTFDTRDMTVPAFLTKAVFDENKKQAGSLSGNGKYAGDHKYGGLFTNGENGALVGAE
                     YGTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADG
                     SDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGS
                     NLRHQDYYYQNANRAYSSKIPTQNGNQNISPNGSQDKPYWVSIGRGNVVTGQICRLGN
                     NTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTL
                     SWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRSGDKIKAVKIDPEKSFNKEAGI
                     VFKGDFGNLEASWFNNAYRDLIVRGYEAQIKNGKEEAKGDPAYLNAQSARITGINVLG
                     KIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGYD
                     QPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTI
                     KKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEMK
                     F"
BASE COUNT         1551 a         1389 c         1397 g         1092 t
ORIGIN      
        1 gatatacgtg ggaatgacgg gatatacgtg ggaatgacgg gatataggtt tccgtgcgga
       61 cgcgttcgga ttcacgactg cgcgggaatg acgggatttt ggtgtattcc ctaaaaaaaa
      121 ataaaaaagc atttgcaaat ttgttaaaaa taaataaaat aataatcttt atcattcttt
      181 aattgaattg ggtttatatg aacaatccat tggtaaatca ggctgctatg gtgctgccgg
      241 tgtttttgtt gagtgcttgt ctgggcggag gcggcggcag tttcgatctt gattctgtcg
      301 ataccgaagc cccgcgtccc gcgccaaaat atcaagatgt ttcttccgaa aagccgaaag
      361 cccaaaaaga ccaaggcgga tacggttttg cgatgaggtt gaaacggagg aattggtatc
      421 cgcaggcaaa agaagatgag gttaaactga acgagagtga ttgggagacg acaggattgc
      481 cgacagaacc caagaaactg ccattaaaac aagaatccgt catttcaaaa gtacaagcaa
      541 acaatggcga caacaatatt tacacttccc cctatctcac accatcaaac catccaaacg
      601 gcaacactgg caacggtata aaccaaccaa aaaatgaagt aaaagattat aaagatttca
      661 aatatgttta ttccggctgg ttttataaac atgctagaaa cgaaatcata agagaaaaca
      721 gctcaattaa gggtgcaaag aacggcgacg acggctatat cttttatcac ggcaaagaac
      781 cttcccgaca acttcccgct tctggaacag ttacctataa aggtgtgtgg cattttgcga
      841 ccgatgtcaa aaagtcccaa aattttcgcg atattatcca gccttcgaaa aaacaaggcg
      901 acaggtatag cggattttcg ggcgatgacg gcgaagaata ttccaataaa aatgaagcga
      961 ctttacgaag cggtcaagag ggttatggtt ttacctcaaa tttagaagtg gatttcaata
     1021 ataaaaaatt gacgggtaaa ttgatacgca acaatgcgaa taccggtaac aaccaagcca
     1081 ccacccaata ttacagcctt gaggctcaag taacaggcaa ccgcttcaac ggcaaggcga
     1141 tggcaaccga caaacccggc aacggcgaaa ccaaacaaca tccctttgtt tccgactcgt
     1201 cttctttgag cggcggcttt ttcggcccga agggtgagga attgggtttc cgctttttga
     1261 gcgacgataa aaaagttgcc gttgtcggca gcgcgaaaac caaagacaaa gacgcaaatg
     1321 gcaatactga ggcggcttca ggcggcacag gtgcggcagc atcgggcggt gcggcagata
     1381 tgccgtctga aaacggtaag ctgaccacgg ttttggatgc ggtcgagctg acgcacggcg
     1441 gcacagcaat caaaaatctc gacaacttca gcaacgccgc ccaactggtt gtcgacggca
     1501 ttatgattcc gctcctgccc aaggattccg aaagcgggaa caatcaagcc aatcaaggta
     1561 caaacggcgg aacagccttt acccgcaaat ttgcccacac gccgaacagc gatgaaaaag
     1621 acacccaagc aggtacggcg gagaatggca atccagccgc ttcaaatacg gcaggtgata
     1681 ccaatggcaa aacaaaaacc tatgaagtcg aagtctgctg ttccaacctc aattatctga
     1741 aatacgggtt gctgacacgc aaaaccgccg gcaacacggg ggaaggcggc aacggcagcc
     1801 aaaccgccgc ccaaacggca cagggtgcac aaagtatgtt cctccaaggc gagcgcaccg
     1861 atgaaaacaa gattccaagc gagcaaaacg tcgtttatcg ggggtcttgg tacgggcata
     1921 ttgccaacag cacaagcaca agctggagcg gcaatgcttc caatgcaacg agtggcaaca
     1981 gggcggactt taccgtgaat tttggcgaga aaaaaattac cggcacgtta accgctgaaa
     2041 acaggcaggc ggcaaccttt accattgagg gaatgattca gggcaacggc tttgaaggta
     2101 cggcgaaaac cggtgatggc ggctttgcgc tggatccgaa aaatacggaa gcctcccata
     2161 aagcgagcat caatgccact gtaaccggcg gtttttacgg gcctaaagcc gaagaaatgg
     2221 gcggatggtt tgcctatccg ggcgacagtc aggcgcagcc gtccgcttcg gggtcaggta
     2281 cgtcagccgc caacagcgcg accgtggtat tcggtgcgaa acgccaacag cttgtgcaat
     2341 aagcacggct gccgaacaat cgagaataag gcttcagacg gcatcgctcc ttccgatgcc
     2401 gtctgaaagc gaagagtagg gaaacactat gcaacagcaa catttgttcc gattaaatat
     2461 tttatgcctg tcgctgatga ctgcgctgcc cgtttatgca gaaaatgtgc aagccggaca
     2521 agcacaggaa aaacagttgg ataccataca ggtaaaagcc aaaaaacaga aaacccgccg
     2581 cgataacgaa gtaaccggtt tgggcaaatt ggtcaaaacc gccgacaccc tcagcaagga
     2641 acaggtactc gatatccgcg acctgacgcg ttacgacccc ggcatcgccg tggtcgaaca
     2701 ggggcgcggc gcaagctcgg gctattcgat acgcggtatg gacaaaaacc gcgtttcctt
     2761 gacggtagac ggcttggcgc aaatacagtc ctacaccgcg caggcggcat tgggcgggac
     2821 gaggacggcg ggcagcagcg gcgcaatcaa tgaaatcgag tatgaaaacg tcaaagctgt
     2881 cgaaatcagc aaaggctcaa actcggtcga acaaggcagc ggcgcattgg cgggctcggt
     2941 cgcatttcaa accaaaaccg ccgacgatgt tatcggggaa ggcaggcagt gggggattca
     3001 gagtaaaacc gcctattccg gcaaaaccgg ggggcttacc caatccatcg cgctggcggg
     3061 acgcatcggc ggtgcggagg ctttgctgat ccacacgagt cggcgcgcgg gggaaatccg
     3121 cgcacacgaa gccgccggac gcggcgttca gagctttaac aggctggtgc cggttgaaga
     3181 cgaccaccaa tacgctcatt tcgtggtcga agaagaatgc gaaagcagaa attacgaaac
     3241 gtgtaaagcg aatccgaaaa aagatgttgt cggcaaagac gaacgtcaaa cggtttctac
     3301 ccgagactac acgggtccca accgctttct ctccgatccg ctttcatacg aaagccggtc
     3361 gtggctgttc cgcccgggtt ttcgttttga aaacaaacgg cactacatcg gcggtatact
     3421 cgaacgcacg caacaaactt tcgacacgcg cgatatgacg gttccggcat tcctgaccaa
     3481 ggcggttttt gatgaaaata aaaaacaggc gggttctttg tccggcaacg gcaaatacgc
     3541 gggcgaccac aaatacggcg gactgtttac caacggcgaa aacggtgcgc tggtgggcgc
     3601 ggaatacggt acgggcgtgt tttacgacga gacgcacacc aaaagccgct acggtttgga
     3661 atatgtctat accaatgccg ataaagacac ttgggcggat tatgcccgcc tctcttacga
     3721 ccggcagggc atcggtttgg acaatcattt tcagcagacg cactgttctg ccgacggttc
     3781 ggacaaatat tgccgcccga gtgccgacaa gccgttttcc tattacaaat ccgaccgcgt
     3841 gatttacggg gaaagccaca ggctcttgca ggcggcattc aaaaaatcct tcgataccgc
     3901 caaaatccgc cacaacctga gcgtcaacct cggttttgac cgctttggct ctaatctccg
     3961 ccatcaggat tattattatc aaaatgccaa ccgcgcctat tcgtcgaaaa tacccactca
     4021 aaacggcaat caaaacatca gccccaacgg cagccaagac aaaccctatt gggtcagcat
     4081 aggcagggga aatgtggtta cggggcaaat ctgccgcttg ggcaataata cttatacgga
     4141 ctgcacgccg cgcagcatca acggcaaaag ctattatgcg gcagttcggg acaatgtccg
     4201 tttgggcagg tgggcggatg tcggcgcggg cttgcgctac gactaccgca gcacgcattc
     4261 ggacgacggc agcgtttcca ccggcacgca ccgcaccctg tcctggaacg ccggcatcgt
     4321 cctcaaacct gccgactggc tggatttgac ttaccgcact tcaaccggct tccgcctgcc
     4381 ttcgtttgcg gaaatgtacg gctggcggtc gggtgataaa ataaaagccg tcaaaatcga
     4441 tccggaaaaa tcgttcaaca aagaagccgg catcgtgttt aaaggcgatt tcggcaactt
     4501 ggaggcaagt tggttcaaca atgcctaccg cgatttgatt gtccggggtt atgaagcgca
     4561 aattaaaaac ggcaaagaag aagccaaagg cgacccggct tacctcaatg cccaaagcgc
     4621 gcggattacc ggcatcaatg ttttgggcaa aatcgattgg aacggcgtat gggataaatt
     4681 gcccgaaggt tggtattcta catttgccta taatcgtgtc cgtgtccgcg acatcaaaaa
     4741 acgcgcagac cgcaccgata ttcaatcaca cctgtttgat gccatccaac cctcgcgcta
     4801 tgtcgtcggc ttgggctatg accaaccgga aggcaaatgg ggtgtgaacg gtatgctgac
     4861 ttattccaaa gccaaggaaa tcacagagtt gttgggcagc cgtgctttgc tcaacggcaa
     4921 cagccgcaat acaaaagcca ccgcgcgccg tacccgccct tggtatattg tggatgtgtc
     4981 cggttattac acgattaaaa aacacttcac cctccgtgcg ggcgtgtaca acctcctcaa
     5041 ctaccgctat gttacttggg aaaatgtgcg gcaaactgcc ggcggcgcag tcaaccaaca
     5101 caaaaatgtc ggcgtttaca accgatatgc cgcccccggc cgaaactaca catttagctt
     5161 ggaaatgaag ttttaaacgt ccaaacgccg caaatgccgt ctgaaaggct tcagacggca
     5221 ttttttacac aattcccgcc attttccatc atccccgata caccgtaatc ctgaaacccg
     5281 tcattcccgc gcaggcggga atccagtccg ttcggtttcg gttttttgag gtttcgggta
     5341 acttctaaac cgtcattccc gcgaaggcgg aaaatcaaaa acagaaacct caaatcccgt
     5401 cattcccgcg caggcgggaa tctagacat
//
LOCUS       DBBZYD010000120         4814 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.120, whole genome shotgun sequence.
ACCESSION   DBBZYD010000120 DBBZYD010000000
VERSION     DBBZYD010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.120"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(456..800)
                     /locus_tag="ACJJDL_001881"
     CDS             complement(456..800)
                     /locus_tag="ACJJDL_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574540.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(838..1161)
                     /locus_tag="ACJJDL_001882"
     CDS             complement(838..1161)
                     /locus_tag="ACJJDL_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574541.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYETFDIL
                     KQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQEISQDIL
                     NEIFR"
     gene            complement(1164..1448)
                     /locus_tag="ACJJDL_001883"
     CDS             complement(1164..1448)
                     /locus_tag="ACJJDL_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574542.1"
                     /translation="MAGGNKSLKIGTQSVEKSTGRTIPNNLKEQLAMEEVKANPQGKT
                     PARIPPMSDTKNGWLAKDGWVKRVQNVNKIEIHYIENSRTGEKTDFKFKD"
     gene            complement(1431..1757)
                     /locus_tag="ACJJDL_001884"
                     /pseudo
     CDS             complement(1431..1757)
                     /locus_tag="ACJJDL_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257312.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(1863..2234)
                     /locus_tag="ACJJDL_001885"
     CDS             complement(1863..2234)
                     /locus_tag="ACJJDL_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7574543.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(2231..2586)
                     /locus_tag="ACJJDL_001886"
                     /pseudo
     CDS             complement(2231..2586)
                     /locus_tag="ACJJDL_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2614..2820)
                     /locus_tag="ACJJDL_001887"
     CDS             complement(2614..2820)
                     /locus_tag="ACJJDL_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574544.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(2830..3675)
                     /gene="mafB"
                     /locus_tag="ACJJDL_001888"
                     /pseudo
     CDS             complement(2830..3675)
                     /gene="mafB"
                     /locus_tag="ACJJDL_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(3772..3984)
                     /locus_tag="ACJJDL_001889"
     CDS             complement(3772..3984)
                     /locus_tag="ACJJDL_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574545.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(4061..4420)
                     /locus_tag="ACJJDL_001890"
     CDS             complement(4061..4420)
                     /locus_tag="ACJJDL_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HGG7574546.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(4425..>4814)
                     /locus_tag="ACJJDL_001891"
     CDS             complement(4425..>4814)
                     /locus_tag="ACJJDL_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574547.1"
                     /translation="PPKSITSGGKANAATYPQLVNQLTGQNLKNIAAQDPRLSLALHK
                     SEKNFPIGTATYEEADRLGKIWVGEGARQTSGGGWLSIDGTRQYRPPTEKNSQFATTG
                     IQANFETYTIDSNGKRNKIKNGHLNIR"
BASE COUNT         1340 a          935 c          762 g         1777 t
ORIGIN      
        1 attaatacct tgtaaagttt gctgcgcaga gatgtaggtc ggatatttgt atccgacaaa
       61 aatatttgac gcatctatcg tttccgaaat gccgctgttg gaaaatgtcg gattcgagaa
      121 tccgacctac ggctatttcg tttaagtcat aaatagccat tcatgttcct tctgaatttg
      181 cttttgctat ccttagaacc aatcatataa acattatcat cattaattaa tgttctaagt
      241 ttatgaagcg gtcaaatctg tcaaactacc agagatgaag catatcctcc tggaagtaat
      301 tctgttcgtg ctgtttccat atcttctttg ccatcatcag ttacttctct gtctaaataa
      361 aatcttacga taagtttttg tctaatttca tcaaattctg ccgtaattaa tcttatattg
      421 atatgaatac acggttcata cctgctatta gccagtcagg tgtagttgga tggggattca
      481 tttttaataa tatcttcaag caagtgaaat gtaagaaaag cgtagatact tgaaggccgg
      541 ctatctgatt ggcaaaaaga aatttcggag ataaagaatt tccgtttata tttttcataa
      601 attaaatcaa caccttgttt tacataaaaa ctaacttcct caggaaggat atttataaca
      661 ttctctcctt ttacttttat agttaatggt ttgattttta tgttttcatg aatatctgat
      721 aggattattt ctaaaaaatt atttttattt ccagtcattc tggctatttt atgtatattt
      781 ccattgtgtt cgattatcat tttatttttt ccaaggattt ccttctatat tgatagttta
      841 tctaaagatt tcatttaaaa tatcctgact aatttcttgt ttatataatt ctacaatttt
      901 ctgtttctgt gtatttgtat aaaatttttc gttggtatct gcttgatatt ttaattgtct
      961 caatatttcc atgatttcat attctgattt ttcatcatat tcttcaatca tgtaatcaac
     1021 aaattgtttt agaatatcaa aggtttcgta actttccaaa attttaatat gtttatcggc
     1081 aaaattggac atataccatt cgtcagtgat tggattagta tttaaatcat ctaaaaaaac
     1141 atttacatca tctaaaaaca tgactaatcc ttaaacttaa aatctgtttt ctcaccggtt
     1201 cttgagtttt caatgtaatg tatttcaatt ttgtttacgt tttgaacacg cttaacccaa
     1261 ccgtcttttg ctaaccaacc atttttagta tcggacatag gaggtattct cgcaggagtt
     1321 ttgccctgtg ggtttgcctt aacttcttcc attgctaatt gttcctttaa attattaggt
     1381 attgtacgac cggttgattt ttcaacagat tgtgtcccta tttttaatga tttgtttccc
     1441 ccagccattt ccccgtctac agtctgcata gggcgggcag caggtttttt atagccggta
     1501 tttttaaccc aatcccattt agtcgggtta agttctactt ttttaccgcg ccaaaccgta
     1561 cctgcggcct ctgctacgga aagggcagtt tgggctgttg cagttatatt cggatgggca
     1621 tcagcccatt gtctggcgga attaatgccg ttttttaccg caaaagcact gtcctgtaat
     1681 aggctcgcgg cagcaagttg tgcttccgga cttaaatttc ctaattcatt aatatcttgt
     1741 aaagtttgct gcgcagagat gtaggtcgga tatttgtatc cgacaaaaat atttgacgcg
     1801 tctatcgttt ccgaaatgcc gctgttggaa aatgtcggat tcgagaatcc gacctacggc
     1861 tgctaccaac catcattttc agcttctttt agccaagtat caaaattttc aaaagtctcg
     1921 taatattttg tattatctaa attaactact ataattttag gattacctga tttatctgaa
     1981 atatcaaaac aggcagccca ctcttggttt ctagcaaaag gtaataggtt tggaatgcca
     2041 gttatttcaa aataaatgtc aattacttct gatatattgc tttctgcatt ttcaaaccac
     2101 caaggaaaag aatattgttc atcgtagtta atggcatgag tggattgagc taattttaaa
     2161 taactttgcg gatatttaaa tcctttagga agcattgctt caggatacgg aacaaaacta
     2221 ttttgtttta tcatttccta agtaccttta catcataaat acttccgtta ggaaatcttt
     2281 tgctccaccc ttctggaact cctttttgtg tttcttgctt tctaattcgt agctggatag
     2341 cttctcccca agtttgaggc tcaataccat catgcttaaa cctgattctc tcttttgatg
     2401 ataatcggtc attaaaatta tgaacattcg cttccacttt tacccctgct tcatgtgctg
     2461 ccataatacg cgtgttatcc atactagtag gtgctccatc aggcatatta acaacatcaa
     2521 ccctgtcgcc aacccatgat ttttttcgtt cattgcagct acaagagaat catagttgta
     2581 atttgcacta ggctctgaca aaaatttggg ttgttaagtt gtcatttttt tataaattcc
     2641 agcaaactgt tgttgtaaat tatctacttc atgttttcta acaccagata cattttcaaa
     2701 ttctcttgaa tctacacata cgcccgcata tatctcattc aagatagctc gtaaaacaaa
     2761 aacttcatct tgagttagtg aaatagttga gttttgatta tttatggata gtatattcat
     2821 ggctttttcc tataaatcat cataatattt tttacctgat gttggtctaa atgctgtacc
     2881 tccatcgtca gaatttttat ctcggataac tattgtccct gttttatcat cccaatacgc
     2941 agttctaccg cgaggtaact ctttcatatt tgttggatgg ctaacaatat tttcaatatg
     3001 ccgagcaaaa tctgctggtg aattgatatt taaatccgta aattcttgtt gtcttatgac
     3061 atgcttgtta taagcatgcc cactactaat ttgttctcca attagttgcg cttgtaaaga
     3121 cggttgtgtg gaagcatctg ctttgctgtt ggacgttata gatttaggcg gtctattccc
     3181 ccctgccatc tccccatcta cagtctgcat atggcgggca gcaggttttt tatagccggt
     3241 atttttaacc caatcccatt tggtcgggtt aagttctact tttttaccgc cccaaaccgt
     3301 agttgcggcc tctgctacgg caagggcagt ttgggctgtt gcagttatat tcggatgggc
     3361 atcagcccat tgtttggcag agttgatacc gtcttttacc gcaaaagcac tgtcttgtaa
     3421 tgcggttgca gccgcaagtt gtgcttcggg acttaaattt cctaaatgat taataccttg
     3481 tagagtctgc tgcgcggctg tatctgtgac cgggcttact gcactgtctg taattgcccc
     3541 aatccctact ccttgaaaac ccattaaaaa aggattaacc gcaccttgga cgatgccgcg
     3601 aacatcatcc atacggttag cccaccaatt tttattgggg tcgttttccc atatcagttt
     3661 tcctgcttca tcagcacagt taggattggc attgatgccc acccagtttc aggcagcctg
     3721 aaaaggattt ttaatatacg gcaaaaggtg ggcaacaagt gcccacctta cctagctaac
     3781 atttatccca agtatcatat atttttttaa gttctttatc caaagaaaga actttatttt
     3841 ttcaacacca tgaattatct caaaatctct acaatccacg catacgcctg aataaatttc
     3901 tcctacaatt gcttgaataa tatacaactc atctttatcg agactaattt taactgaact
     3961 ctcttcaaaa ttaattaatt tcatgaataa ttccttttat tttaattcgt catcaaaata
     4021 ccgtttgcct gtttttggtc taaatgctgt cccaccatct ttagtcttgg atatttagat
     4081 tataatcgtc aaattcccag tcaaaatatt ttgccaaatt tgatatagac ttatcttcag
     4141 acgttgaatt acatatttcc aatatatcat ttatcaattt taatatgtgt tcaatattaa
     4201 aacggtttgt aacaattgag ttttttaatg acatcggtct atgtatattt gaaagtaacc
     4261 attcagtgct atatatataa acataaaaat aatcagcacc attactttca tcaaaaccta
     4321 ttgataatgt caaaagtata caaaaatttt ctaacttgtc ttgtgggaaa tcttccaaat
     4381 caaagtcaga acaatcataa ttttttaatt ttaatctcat ataattacct aatatttaaa
     4441 tgtccatttt taattttatt cctttttcca tttgaatcaa tagtataagt ttcaaaattt
     4501 gcttgaatac ctgtagttgc aaattgtgaa tttttttctg ttggtggccg atattgtcga
     4561 gtgccatcta tacttaacca tccgcctcca ctagtttgtc ttgcaccctc accaacccaa
     4621 attttaccta gcctatctgc ctcttcataa gttgcagttc ctattggaaa atttttttca
     4681 ctcttatgaa gagctagact caatcttgga tcttgagccg caatgttttt taagttttgc
     4741 ccagttaatt gattaactaa ttgaggataa gttgcagcat tggcttttcc tccagacgtt
     4801 atagatttag gcgg
//
LOCUS       DBBZYD010000121         4510 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.121, whole genome shotgun sequence.
ACCESSION   DBBZYD010000121 DBBZYD010000000
VERSION     DBBZYD010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.121"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..82
                     /locus_tag="ACJJDL_001892"
     CDS             <1..82
                     /locus_tag="ACJJDL_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7574548.1"
                     /translation="IGRDKLFIHPRLMELLRGEGNSFTSF"
     gene            complement(810..1622)
                     /gene="murI"
                     /locus_tag="ACJJDL_001893"
     CDS             complement(810..1622)
                     /gene="murI"
                     /locus_tag="ACJJDL_001893"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HGG7574549.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALSTTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAGNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            1817..2278
                     /gene="tsaE"
                     /locus_tag="ACJJDL_001894"
     CDS             1817..2278
                     /gene="tsaE"
                     /locus_tag="ACJJDL_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HGG7574550.1"
                     /translation="MFDFPPISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHLGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHGGGGRKCLLTAHTERGRESLPL"
     gene            2275..3525
                     /locus_tag="ACJJDL_001895"
     CDS             2275..3525
                     /locus_tag="ACJJDL_001895"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7574551.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFTLDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            3605..4423
                     /locus_tag="ACJJDL_001896"
     CDS             3605..4423
                     /locus_tag="ACJJDL_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7574552.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPEPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDISRNFSL"
BASE COUNT         1123 a         1303 c         1076 g         1008 t
ORIGIN      
        1 catcggcagg gacaaactat tcattcatcc gcgcctaatg gaactattgc ggggagaggg
       61 caacagcttt acttcattct aaccccctct tcccccccac atgactaaca cgaaacaggg
      121 attttgacac ccgaaccgag accccttgta tttcccccgc gaaaagccgg catccgcccg
      181 cgtatcatgg gagcaacaaa acccctgcct aaaattttga cttgtgcaaa ttgggggtat
      241 atttgggggt atattgaaaa atggctaaaa taaaatgttt aataaacaaa atgttgaaac
      301 ttaatttcga tagagcatct gcatatcgta ttgaggcgtt catggaattt gagaaagcta
      361 tttttaaata agaaaaggta actattaaat agctaccttt ctaaaattaa atatcaacac
      421 atcgttaaaa cacagccaaa aaaaaaaccg aaaccgaacg gtctggattc ccgcctgcgc
      481 gggaatgacg ggtttcgaga ttacagtgta tcgagaagga tgggaaacgg tgggaattgt
      541 gtaaaaaatg ccgtctgaag cctttcagac ggcatttgcg gcattcggac atttaaaaat
      601 cccatcattc ccgcgcagga gggaatccga atacatccgc acagaaacct gcatcccgtc
      661 attcccacga aagtgggaat ccaggacgca aaatctcaag aaaccgtttt acccgataag
      721 tttccgcacc gacaggtcta gattcccact ttcgtgggaa tgacgggatt ttaggtttct
      781 gtaatctcgg gcagctttcc gtcatcgttt taacccaaag acaccatttc aatctgctcc
      841 atcgtcctgc ccagaaaacg ctcgccgatg gttctgaatt tcaaaggaat atcgctgacg
      901 taaaaacggt agtcgggatt gttgttgtcg gtattgagca atccttcctg agcaaggacg
      961 cgtgcggttt cttcggccgt tgtaattgca gaatcaacca acgcgacatt gcccgcctcc
     1021 ctgccgatta agggcttgag caagggaaag tgcgtgcagc ccaacaccag cgtatcgatg
     1081 ccgtctgcaa gcaatggttt gaggtattcg catacggtca ggcgggtaac ttcgtgttcc
     1141 aaccagccct cttccaccaa agggacgagc agcggcgcgg cctgcgtgcg gacgagcgtg
     1201 tcggggttgt ccctgtggat ggcgcgcgca taagcattgc tgttgactgt ggtattggtg
     1261 gcgataatgc cgattttgtt gttgcgcgtg gttgacagcg cggctttcgc gccggcggaa
     1321 atcacgtcca acacaggcat attgcccgtc ttttgacgga ttttctgccc cgcaaccgcc
     1381 gcaatcgtgt tgcacgcgat aaccatcgcc ttaacatcgt gttccaataa aaaatcgaca
     1441 atctgcatcg agaaattttc gatggtcgcc ttagatttcg tcccgtaagg cacgcgcgcc
     1501 gtgtcgccga aataaatgat gttctccatc ggcagccgct ccatcagcgc gcgcacattg
     1561 gtcaaaccgc cgattcccga gtcaaaaacg ccgatgggtc gctgcctgcc gatattttcc
     1621 atcctttttc caatccgtcc caaacataca atccgcgtat tgtacacgcg ccgctttttc
     1681 ttgacagcca ttgccgtctg aaagcaggat gcggatttgg ctgttataat gtacggcaat
     1741 gccgcatccg gcccgccggg cgcacggttt gccggccgcc ctctccgatc cgccacataa
     1801 aagttttaaa gcccctatgt ttgatttccc ccccatttcc cgattccttg ccgacgaagc
     1861 cgccacactc gatttgggcg cggcgtggtc ttcccgttta aacgcaccgc tggtcattta
     1921 tctcgaaggg gatttgggtg cgggcaaaac cacgctgaca cgcggcatcc tacgcggatt
     1981 gggtcatctg ggcgcagtca aaagcccgac ctacgccatc gtcgaatctt atccgctgga
     2041 acgcttcacc ttgcaccatt tcgacctcta ccgcttctcg ttccccgaag aatgggaaga
     2101 cgcggggctt gacgaactgt ttgccgcaaa cagcgtctgc ctgatcgaat ggccgcaaca
     2161 gggcggggaa tttacgccgc ccgccgacat caccgcaaca ttgacacacg gcggcggcgg
     2221 cagaaaatgc ctgctgaccg cccataccga acgaggacgc gaaagcctgc cgctatgacc
     2281 aaactgacac gaagacaaat catccgccgc accgccggca cactgttcgc cctaagcccc
     2341 atcgcatccg ccgttgccaa aacggtacgc gccccgcaat tcaccgccgc acggatatgg
     2401 ccgtcgcaca cctacacccg cctgacgctg gaaagcaccg ccgcgctcaa ataccagcac
     2461 ttcacgctcg acaacccggg caggctggtc gtcgacatac aaaacgcgaa catcaatacc
     2521 gtattgcacg gactgtctca gaaggttatg gcggacgacc cttttatccg cagcatacgc
     2581 gcgggtcaga acacaccgac caccgtccgc ctcgtcatcg atttgaaaca gccttcctac
     2641 gcgcaagttt tttccctccc ccccgtcggc ggctttaaaa accgcctcgt cgtcgatctc
     2701 tatccgcaag ggatggatcc cgacgatccg atgatggcgc tgcttaacgg cagcctgaac
     2761 aaaacccgtc gcggctcccc tgaagccgac ctcgctcaaa acactcccgc acaaaccgaa
     2821 cgcggcaaaa acgggcgcag acccgtcatt atgatcgacc ccggacacgg cggcgaagac
     2881 cccggcgccg tcagcccggg cggcctacag gaaaaacacg tcgtcctctc catcgcccgc
     2941 gaaaccaaaa aacaattgga agccttgggt tacaacgtct ttatgacgcg caacgaagac
     3001 gtgttcatcc cattgggcgt gcgtgtcgcc aaagggcgag cacggcgggc ggacgtattc
     3061 gtctccatcc acgccgacgc tttcaccagc ccctccgcgc gcggcacagg ggtttatatg
     3121 ctgaacacca aaggcgcgac cagctccgcc gccaaattct tggaacaaac ccaaaataat
     3181 gccgacgcgg tcggcggcgt accgaccagc ggcaaccgca atgtcgatac cgccctgctc
     3241 gatatgaccc aaaccgccac gctgcgcgac agccgcaaac tcggcaaact ggtgcttgaa
     3301 gaattgggca ggctcaacca tctgcacaaa ggcagggtgg acgaagccaa tttcgccgtt
     3361 ttgcgcgcgc ccgatatgcc gtctatcctg gtcgaaaccg ccttcctgtc caatcctgcc
     3421 gaagagaagc tgctgggcag cgaatccttc cgtcggcagt gcgcccaatc cattgcctcg
     3481 ggtgtccaac gctacatcaa tacatccgta ttgaagcggg gttgattgaa aaggcggtgt
     3541 ttcaatatag ttgtcggatg aaggcaggca taaacctact tccgccccaa accgcgtttt
     3601 tatgatgaaa ggtatggata aattgagata ccaacaggat tttttaaata tccgccccat
     3661 ttttacagcc ggcgaacaag aatacctgac cgaattgtcc gatcggcttc ctttatctgt
     3721 tttaacggac tccgtgcgta atattgaaga aatcggtatc gattttgtgt acagttctgc
     3781 caaattggaa ggaaacactt ataatcaata cgatacgcag gcattgctta aactcgggca
     3841 aaccgcaggc gggaagttat attcggatgc cgtaatgtta atcaacctga gggaaagtta
     3901 ccggcacctg ctgtccggtt tggacagccc cgagccgttt gactggttgg atttcttaaa
     3961 aaccacccac agcctgattt ccgaaaactt actggaaaaa ggctccggcg gcgtagtccg
     4021 ccgcgacagc gttaccataa gcgggacaga ctacacccct ttatctaacc cgcaaagttt
     4081 ggatacggaa ttaaaatggt tgcttcaaga agctcccaaa atagaaaatc ctttcgaccg
     4141 cgccgtttat ctccataata atttggcgta tcttcaatat tttaaagatt gcaataaacg
     4201 tactgccaga aactgcatga ccttgtcgct gatgcgctcc ggtttttttc cttgcgtatt
     4261 ctcccccgac agttatcccg cctatgccga ggctgtcgta gcctattacg aaaccggcga
     4321 ttacggttta ttcaagaaat attttatttc ggcatacgaa aataccgtaa ataagtacgg
     4381 cccacagcct gatatggata tttcccgcaa cttctccctt taattccaag gggttgttat
     4441 ccgtatcttc cgcacgcggc aaatgcggcg gcacagtgga cacacccctc ccttaccttc
     4501 ggttatagtg
//
LOCUS       DBBZYD010000122         4156 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.122, whole genome shotgun sequence.
ACCESSION   DBBZYD010000122 DBBZYD010000000
VERSION     DBBZYD010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.122"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(196..267)
                     /locus_tag="ACJJDL_001897"
     tRNA            complement(196..267)
                     /locus_tag="ACJJDL_001897"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(232..234),aa:Arg,seq:cct)
     gene            complement(287..733)
                     /locus_tag="ACJJDL_001898"
     CDS             complement(287..733)
                     /locus_tag="ACJJDL_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HGG7574553.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(738..1712)
                     /gene="ispB"
                     /locus_tag="ACJJDL_001899"
     CDS             complement(738..1712)
                     /gene="ispB"
                     /locus_tag="ACJJDL_001899"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HGG7574554.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            1936..2244
                     /gene="rplU"
                     /locus_tag="ACJJDL_001900"
     CDS             1936..2244
                     /gene="rplU"
                     /locus_tag="ACJJDL_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HGG7574555.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2269..2541
                     /gene="rpmA"
                     /locus_tag="ACJJDL_001901"
     CDS             2269..2541
                     /gene="rpmA"
                     /locus_tag="ACJJDL_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HGG7574556.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            2929..4113
                     /gene="ubiM"
                     /locus_tag="ACJJDL_001902"
     CDS             2929..4113
                     /gene="ubiM"
                     /locus_tag="ACJJDL_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HGG7574557.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNITILTDTAVKEVKTSDNEAQVILENGKILT
                     ARLLLAADNRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGASSL
                     LEKYSNKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT         1192 a         1149 c          909 g          906 t
ORIGIN      
        1 cataaaacaa cagatttcca agccggaaca tcttttacgg agcctgaaaa tcatttcatg
       61 attctaccgt cctaaaggtc ggtttttcaa gcaggaagaa aaagttttca gatggcaaaa
      121 aagccctcca acactgaaag gccttatatc ggaaacttcc cgcaacacgg gaaacagaca
      181 aatgaaatcg tcaaacctcg ccaacaggaa tcgaacctgt attttacgct taggaggcat
      241 acgttctatc cgttgaacta tggcgagccg aaatgaaaag gagattttaa ccctttccga
      301 cgacaaaaga caagatgccg gccgcaatca gcggcccgac agggataccg cccataaatg
      361 ccaccccgat aaccgtcccg attaacagcc ctgtaattaa aacaggctgc tgtcccatca
      421 aaggcacgcc gcgtcccgcc agccaagcca cgaaaatacc gataaaaacg gcggatatca
      481 ttttaaaatt caaaaattcg gcaacgggag gaacctgcgc ctttcctgaa accaacggac
      541 tcaaaacccc tatggtcaaa agaatgatac cgagattcaa cccatgcttc tcgaccaacg
      601 ggacaaactg taccaatgcc gtctgctgca tcagcagcaa tatggttgcc gagatggtaa
      661 tcgaattgtt gttgctgacc acccccaaca gaatcagcgt aaccagaaac aggggaacaa
      721 aactgaaatt catcgcctca agacaccctg accaaagatt ccttcgccag ctgaatcatg
      781 gcatccttca cttcgctgtc gggcagggca tccaaggcgg taacggcaca atcgactgct
      841 ttgcgcgcct cgcctatcga atatgccaaa gcatccgaac ggacgacata atcgtggatt
      901 ttctcaaaat agctgcgatc tgcattttcc aaagcagtac gcacatcgtt cgcaacctgt
      961 tcggaaccct gacgcatcag ataaatcaaa ggcaaagtcg gttttccttc cgccaaatcg
     1021 tcgccgacgt ttttgccggt ttcttcggtt tcgccagaat agtccagcac atcgtcaata
     1081 atttggaatg ccgtaccgac atacataccg tagtctttca acgcccgttc gtgttcgggg
     1141 gaagccttgc ccaaaattgc gccgacctgc gccgccgctt caaacaattt tgccgtttta
     1201 tattggatga cttggatata ttgttcttcg gtaatgtccg tattgccgat gttcatcagc
     1261 tgcatgactt cgccctcggc aataatgttg gttgcatccg ccatcacttc caaaacgcgc
     1321 atactgcccg aggcaaccat cagttgaaag gcgcgcgtgt ataaaaagtc gccaaccaac
     1381 acagccgccg cattgccgaa cagattgttt gccgttgccc gcccacggcg caaatcgctt
     1441 tcatcgacga catcgtcgtg cagaagcgtc gaagtgtgga taaactcgac catcgccgcc
     1501 agcgaataca gtttctcgtc atcataaccg accgccttac ccgccaaaat cgtcataatc
     1561 ggacgcaggc gtttgccgcc cgcgctgatg atatatgtac cgatttgcga aatcagtgcg
     1621 acatcggatt gcaccgcacg gttgatgact tcattgactt tggcaaggtc ttcaggcaga
     1681 tgtcgctgga aatagggcag attctcgagc atggcagact ctcaggttta cgtttccgtc
     1741 aaacggcaga taccgcttga aagctgattc aaatagcggg caattatatc agcaaagcca
     1801 tcagggtaca tcttttcaga cggcatatgg ttatccgaac cgcgcaaact ttgacaaaac
     1861 aggcaaataa caatacaatg ccgagttccg cacaatggtg tgcggatatt aaccataacc
     1921 cttatggagt tgagtatgta cgcggtcgta aaaactggcg gcaaacagta taaagtttcc
     1981 gtcggcgaaa aattgaaagt agaacagata ccagccgaac tcgacagcca aatcgaactg
     2041 accgaagttt tgatgattgc tgacggcgaa tctgtaaaag ttggcgcacc ctttatcgaa
     2101 ggtgcaaaag taacggctaa agtagtggca cacggtcgtg gcgaaaaagt ccgcatcttc
     2161 aaaatgcgcc gccgcaaaca ctaccaaaaa cgccaaggcc accgccaaaa tttcacccaa
     2221 atcgaaatcg tggcaatcgc ctaaccttaa aacttaggag cattacaaat ggcaagtaaa
     2281 aaagcaggcg gcagcacccg caacggtcgc gattcagaag ccaaacgctt gggcgttaaa
     2341 gcctacggca acgagctgat tcccgcaggt tccatcatcg tccgccaacg cggcaccaaa
     2401 ttccacgcag gcgacaacgt aggtatgggc aaagaccaca ctttgttcgc caaagttgac
     2461 ggttatgtcg aattcaaaac caaaggcgcg ctgaaccgca aaaccgtaag catccgtcct
     2521 tacaccggtt ctgaagaata attcaaccga acaggaagcc gcatcttttc acgatgcggc
     2581 tttttatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacaaata
     2641 gtacggaacc gattcacttg gtgcttcagc accttagaga atcgttctct ttgagctaag
     2701 gcgaggcaac gccgtactgg tttaaattta atccactata cataccccac acccgatttg
     2761 atacacatta agctgaaagt aaaaatccgc atacaccctc ccctgcatat ttcttcaaca
     2821 gtgggttttg atataatcgc ctatctgtta cagatagttc aaacggcatt caaaccctta
     2881 caaataccgt ctgaaatcat cggcatccgt ctatgcaaag gatattttat gagtttacac
     2941 agcgacatcc tcgtcgtcgg cgcaggcccg gcgggtttaa gttttgcagc cgaacttgcc
     3001 ggcagcggtt tgaaagttac cctgatcgaa cgcagcccac tgactgttct gcaaaatcct
     3061 ccatatgacg gacgcgaaat cgccctgacc catttttccc gcgaaatcat gcagcgtttg
     3121 ggtatgtggg acaaaattcc cgaaaacgaa atctaccctt tgcgcgatgc caaagtgctg
     3181 aacggacgtt ccgactacca gctccacttt ccccaaccga ccgaggcgcg cggcgagcct
     3241 gccgactgtt tgggctatct gatttccaac cacaatatcc gccgcgctgc ctacgaagtc
     3301 gtatcccaac tcgacaacat taccattctg accgatacgg ccgttaaaga agtcaaaaca
     3361 tctgacaacg aagcacaagt cattttagaa aacggcaaaa tcctgaccgc ccgcctgctt
     3421 ttggcggcag acaaccgttt ttcgcaaacc cgccgacaac tcggcatttc ttcagatatg
     3481 cacgactaca gccgaaccat gttcgtctgc cgcatgaaac atactctttc caaccaacat
     3541 accgcttacg aatgcttcca ttacgggcgc accatcgcac tgctgccgct ggaagaacac
     3601 ctgaccaata ccgtcattac cgtcgatacc gataaaatca acagcgttca aaacctttcg
     3661 cccgaagaat tggcggcaag cgtaaaagaa cagctcaagg gcaggctcgg cgatatggaa
     3721 ttggtcagca gcatccacca ttaccccctt gtcggtatga ttgccaaacg tttctacggc
     3781 aaacgcagcg cgctgattgg cgatgcggcg gtcggtatgc accctgtaac ggcacacggc
     3841 ttcaacttgg gtctttccag cgcagatatt ctggcaaaac tgatactcga agccgaacaa
     3901 cgcggtcagg acatcggcgc atcttccttg ttggaaaaat acagcaacaa acatatgctg
     3961 cacgcccatc cgctttatca cggaaccaat atgatgctga aactgtttac caacgaaacc
     4021 gcgccggcaa aactgctgcg cggtttggta ttgcgtgccg gcaacaactt cccgccgctg
     4081 aaaaagctga ttaccaaaca actgaccggt tgaaaactgc cgaaatgccg tctgaaacgt
     4141 ttcagacggc attttt
//
LOCUS       DBBZYD010000123         4142 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.123, whole genome shotgun sequence.
ACCESSION   DBBZYD010000123 DBBZYD010000000
VERSION     DBBZYD010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4142
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.123"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(479..904)
                     /locus_tag="ACJJDL_001903"
                     /pseudo
     CDS             complement(479..904)
                     /locus_tag="ACJJDL_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
     gene            1046..1498
                     /gene="dut"
                     /locus_tag="ACJJDL_001904"
     CDS             1046..1498
                     /gene="dut"
                     /locus_tag="ACJJDL_001904"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HGG7574558.1"
                     /translation="MNIEVEMKVLDERMADFIPTYATAGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFAVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            1575..2762
                     /gene="dapC"
                     /locus_tag="ACJJDL_001905"
     CDS             1575..2762
                     /gene="dapC"
                     /locus_tag="ACJJDL_001905"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HGG7574559.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTLNSDTEILPVLGSREA
                     LFSFVQTVLNPVSDGIKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            2925..3704
                     /gene="yaaA"
                     /locus_tag="ACJJDL_001906"
     CDS             2925..3704
                     /gene="yaaA"
                     /locus_tag="ACJJDL_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HGG7574560.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESEILMQQLRELALQ
                     QIAELMHVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKTLRAQLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3787..3877
                     /locus_tag="ACJJDL_001907"
     tRNA            3787..3877
                     /locus_tag="ACJJDL_001907"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3821..3823,aa:Ser,seq:tga)
     gene            3955..4044
                     /locus_tag="ACJJDL_001908"
     tRNA            3955..4044
                     /locus_tag="ACJJDL_001908"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3989..3991,aa:Ser,seq:cga)
BASE COUNT         1072 a          995 c         1001 g         1074 t
ORIGIN      
        1 attgaatgtc tagattcccg cctgcgcggg aatgacgaat ccatccgtac ggaaacctgc
       61 accacgtcat tcccacgaac ctacattccg tcattcccac gaaagtggga atccagtttt
      121 ttgagtttca gtcattcccg ataaattgcc ttagcattga atgtctagat tcccgcctga
      181 gcgggaatga cgaatccatc catacggaaa cctgcaccac gtcattccca cgaaagtgga
      241 aatctaggat gcagggtttg ggaaaccgtg ttatccgata agtttccgca ccgacaggtc
      301 tagattcccg cctgcgcggg aatgacgatt catatagtgg attaacaaaa atcaggacaa
      361 ggcggcgaag ctgcagacag tacagatagt acggaaccga ttcacttggt gcttcagcac
      421 cttagagaat cgttctcttt gagctaaggc gaggcaacgc tgtactggtt tttgttaatc
      481 cactataaaa aggcatattg aatgcgggta aaccggttgc tttccgtttt tggatttcgg
      541 agaatgccat cgcccagctt tcatcacaca taaaaaacag tgcgggcacg gcttttttca
      601 gcggtatttc tttcaggtgc agggcaagtg ccgcccccat caggatatgc cgcgaattaa
      661 tcataaaggt tacggtggcg ataagcagta tcggcagagg ttccgcccac aggttgaccg
      721 tggcaaactc ggagccgccg gcgaagttca taccggtcat caacaacatt tccagccagc
      781 tcatgccttt ttgtccaccc tgcataccga gtattaatgc ccaaggcaga agtccgataa
      841 gtatgggcga actttctttg atggcgcgta taaattcgtt atgcggggaa ggtgtgtgca
      901 taatgttcgt cttcataacg ggaagggcgg gcattataca ctggcaacgg atttcaaaac
      961 aaaaccgatt tgccgtgttt cagcgtaaac acggcttgtg tataatctcc catctttgaa
     1021 accggccgta tgcaggagca agacgatgaa tattgaagta gaaatgaaag tgttggacga
     1081 gaggatggcg gattttatcc ctacctatgc gacagcgggt tctgccggtt tggacttgcg
     1141 cgcctgtttg gatgaggaag tcgtcttgca gccgggggaa acgtttcttg tgccgacagg
     1201 tttggcaatt tatttggcca atccttcata tgccgccgtt ttgctgcccc gttccggctt
     1261 ggggcataaa cacggcattg ttttgggcaa tttggtcggt ttgattgact ccgattatca
     1321 aggggaattg aaggtgtcgt tatggaacag aagcagcgaa ccgtttgccg tcaagccgtt
     1381 tgagcgtatc gcgcagatgg ttatcgttcc aatcgtgcag gcgcgtttca aacgtgtcga
     1441 agaatttgtc ggaagcagcc gtggagaagg cggtttcggc agtacgggtt tgcattgaat
     1501 ataaaatgcc gtctgatggg tgccgtcagg ttcagacggc atatcttccg atataccgac
     1561 aaccggagaa cattatgaat accttactca accaactcaa accctatccc tttgcccgac
     1621 tgcgtgaagc gatgcagggc atttccgccc ccgaaggtct ggaagccgtc ccactgcata
     1681 tcggcgaacc gaaacatcca acaccgaaag tcattacaga tgcgctgacc gcctcattgc
     1741 acgagttgga aaaatatccg ctgacggccg gtttgcctga actgcgtcag gcgtgtgcga
     1801 actggttaaa acgccgttat gatgggttga cgctgaattc cgacaccgaa attctgccgg
     1861 ttttgggcag tagggaggcg ttgttttctt ttgtccaaac cgtgttgaac cctgtttcag
     1921 acggcatcaa acccgtaatc gtcagcccga atccctttta tcagatttat gaaggtgcga
     1981 cacttttggg cggcggtgaa atccattttg ccaattgccc cgcgccgtct ttcaaccccg
     2041 attggcgtag tatttccgaa gaggtttgga aacgcaccaa actggtgttc gtctgctcgc
     2101 ccaacaaccc cagcggcagc gtgctggatt tggatggatg gaaagaagtt tttgatttac
     2161 aggataaata tggtttcatt attgcctcgg atgaatgcta ttccgaaatc tatttcgacg
     2221 gcaacaaacc tttaggctgc ctgcaggccg ctgcacagtt gggtcgaagc aggcaaaaac
     2281 tgcttatgtt caccagtttg tccaagcgtt ccaacgttcc gggcctgcgt tccggttttg
     2341 tcgccggcga tgccgaactg cttaaaaact ttctgcttta cagaacctat cacggcagtg
     2401 caatgagcat tcccgtgcag cgcgcaagca ttgccgcttg ggatgacgaa cagcacgtta
     2461 tcgacaaccg ccgcctgtat caggaaaaat ttgagcgcgt tattcccatt ttgcaacagg
     2521 tatttgatgt taaattacca gatgcctcgt tttacatttg gttgaaagtc cccgatggcg
     2581 acgatttggc atttgcacgc aatttatggc aaaaagccgc tatccaagta ttgcctggac
     2641 gttttttggc acgggatacc gaacagggca atcccgggga aggttatgtg cgtattgctt
     2701 tggttgccga tgtcgcaact tgtgtcaaag ctgcggaaac cattgtttcc ctatatcggt
     2761 aaagaataaa aaataccgtc tgaacttttg ttcagacggc atttttcaat attttacggt
     2821 tgaatttgct ataacggtat ttacttcact tttaatctaa tcggcttgcc cgcaaacacg
     2881 tttaaactta aaatccccgt gtttgacaca ataccgagca gattatgttt tttgtccttt
     2941 cccctgcgaa aaaccttaac gaaaaagacc ctgcccctgt cagcgagttt acccaacccg
     3001 acctgctggc agagtccgaa attctaatgc agcagctgcg cgagcttgcg ttgcaacaga
     3061 ttgccgaact gatgcacgtt tccgacaaaa ttgccctctt aaacgcgcag cgcaatgcag
     3121 aatggcacac gccgtttacg ccggaaaacg ccaaacaggc ggtctttatg ttcaacggcg
     3181 atgtttacga aggtatggat gcaaacacat tggatattgg acagatacgc tatctgcaaa
     3241 accatgtccg cctgctgtcc ggtctatacg gtcttcttcg cccgttagac ctgatacagc
     3301 cctatcgttt ggaaatgggg acggcatttg ccaatttgcg cggcaagaat ttgtatgagt
     3361 tttggggcga catcattacc aaccttttaa atgacacgct tgcccaagca ggcagcaata
     3421 cgcttgtcaa ccttgcctca caggaatatt tcaagtccgt caacacgaaa acacttcggg
     3481 cgcagctgat taccccgata tttaaagacg aaaaaaacgg taaatataaa atcatcagtt
     3541 tctatgccaa gcgtgcgcgc ggattaatgg tgcgctatgc ggcagaacat catattaccg
     3601 accctgaaat gctgaaaaat tttaattacg aaggctacgc attcaatgac gcggcttcaa
     3661 atgaaagcga atgggttttt atgcgttcgg aacaaataaa gtgaaaacaa taaattaagt
     3721 attttccgaa aaaagtgctt ggcaaaatgt ataaacttca ttattattct tcttcttcaa
     3781 gaagacggaa gcgtggcaga gcggtttaat gcaacggtct tgaaaaccgt cgagggttga
     3841 tagccctccg tgagttcgaa tctcaccgct tccgccaatc cttggggtca aaaaccaaat
     3901 aaaaatgaag tagcataaag catcggcatt tttatttggt tttacttcat tatcggaaac
     3961 gtggcagaga ggctgaatgc agcggactcg aaatccgctg agggtgcaaa tcctccgtgg
     4021 gttcgaatcc caccgtttcc gccacaaaac aaaaccgccc tgattcgggg cggttctttt
     4081 ttgttcaagt tgagaccttt gcaaaattcc cttccctccc gacagccgaa acccaaacac
     4141 ag
//
LOCUS       DBBZYD010000124         4133 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.124, whole genome shotgun sequence.
ACCESSION   DBBZYD010000124 DBBZYD010000000
VERSION     DBBZYD010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4133)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4133)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4133
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.124"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            43..675
                     /locus_tag="ACJJDL_001909"
     CDS             43..675
                     /locus_tag="ACJJDL_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HGG7574561.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAASLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="ACJJDL_001910"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="ACJJDL_001910"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HGG7574562.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGLLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2198..4067
                     /locus_tag="ACJJDL_001911"
                     /pseudo
     CDS             2198..4067
                     /locus_tag="ACJJDL_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
BASE COUNT          943 a         1122 c         1072 g          996 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcagcc
      601 tctttgttcg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaagcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gccgaccact ttgggcaaag aaaccgccaa tgtcgtgtac cgcctgcaac
     1321 gccagtttaa aaacctgcaa gcgcaagagt tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtc gcctatcctg atgtagattg ggaaacccac tgccgcaact
     1441 tcgtcgaaat cagcctcggt ctgaccttca acccctacac catccaaatc gagccgcacg
     1501 actatatggc ggaattcttc caaaccctca gccgcatcaa cacgattctg atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggctc atcgaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgagg
     1681 gcaacctcgg tatggccaat gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gctggcagcg cgacctgacc gacagcaccg tattgcgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgctgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat cacgcccgaa gtgctgaaag gctttatcgg attgctggaa atccccgccg
     2041 aagccaaagc caaattgctt gagctgaccc ccgcgctgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacgggggc gatatttatg caagctgtcc gatacagacc
     2221 ggaaattgac ggattgcggg ccgtcgccgt gctatccgtc atgattttcc acctgaataa
     2281 ccgctggctg cccggaggat tcctgggggg tggacatttt ctttgtcatc tcaggattcc
     2341 tcattaccgg catcattctt tctgaaatac agaacggttc tttttctttc cgggattttt
     2401 atacccgcag gattaagcgg atttatcctg cttttattgc ggccgtgtcg ctggcttcgg
     2461 tgattgcctc tcaaatcttc ctttacgaag atttcaacca aatgcggaaa accgtggagc
     2521 tttctgcggt tttcttgtcc aatatttatc tggggtttca gcaggggtat ttcgatttga
     2581 gtgccgacga gaaccccgta ctgcatatct ggtctttggc agtagaggaa cagtattacc
     2641 tcctgtatcc tcttttgctg atattttgct gcaaaaaaac aaaatcgcta cgggtgctgc
     2701 gtaacatcag catcatccta tttctgattt tgactgccac atcgtttttg ccaagcgggt
     2761 tttataccga tattctcaac caacccaata cttattacct ttcgacactg aggtttcccg
     2821 agctgttggc aggttcgctg ctggcggttt acgggcaaac gcaaaacggc agacggcaaa
     2881 cagcaaatgg aaaacggcag ttgctttcat cactctgctt cggcgcattg cttgcctgcc
     2941 tgttcgtgat tgacaaacac aatccgttta tcccgggaat gaccctgctc cttccctgcc
     3001 tgctgacggc actgcttatc cggagtatgc aatacgggac acttccgacc cgcatcctgt
     3061 cggcaagccc catcgtattt gtcggcaaaa tctcttattc cctatacctg taccattgga
     3121 tttttattgc tttcgcccat tacattacag gcgacaaaca gctcggactg cctgccgtat
     3181 cggcggttgc cgcgttgacg gccggatttt ccctgttgag ttattatttg attgaacagc
     3241 cgcttagaaa acggaagatg accttcaaaa aggcattttt ctgcctctat ctcgccccgt
     3301 ccctgatact tgtcggttac aacctgtacg caagggggat attgaaacag gaacacctcc
     3361 gcccgttgcc cggcgcgccc cttgctgcgg aaaatcattt tccggaaacc gtcctgaccc
     3421 tcggcgactc gcacgccgga cacctgcggg ggtttctgga ttatgtcggc agccgggaag
     3481 ggtggaaagc caaaatcctg tccctcgatt cggagtgttt ggtttgggta gatgagaagc
     3541 tggcagacaa cccgttatgt cgaaaatacc gggatgaagt tgaaaaagcc gaagccgttt
     3601 tcattgccca attctatgat ttgaggatgg gcggccagcc cgtgccgaga tttgaagcgc
     3661 aatccttcct aatacccggg ttccaagccc gattcaggga aaccgtcaaa aggatagccg
     3721 ccgtcaaacc cgtctatgtt tttgcaaaca acacatcaat cagccgttcg cccctgaggg
     3781 aggaaaaatt gaaaagattt gccgcaaacc aatatctccg ccccattcag gctatgggcg
     3841 acatcggcaa gagcaatcag gcggtttttg atttggttaa agatatcccc aatgtgcatt
     3901 gggtggacgc acaaaaatac ctgcccaaaa acacggtcga aatacacgga cgctatcttt
     3961 acggcgacca agaccacctg acctatttcg gttcttatta tatggggcgg gaattccaca
     4021 aacacgaacg cctgcttaaa tcttcccacg gcggcgcatt gcagtagcct gccttcttgt
     4081 cggatattgc ctttggcagc ctatgccgct gtttgccgtt cggggcggcg gct
//
LOCUS       DBBZYD010000125         4113 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.125, whole genome shotgun sequence.
ACCESSION   DBBZYD010000125 DBBZYD010000000
VERSION     DBBZYD010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.125"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..144
                     /locus_tag="ACJJDL_001912"
     CDS             <1..144
                     /locus_tag="ACJJDL_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HGG7574563.1"
                     /translation="NVGIGSGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRH
                     IRT"
     gene            272..1708
                     /locus_tag="ACJJDL_001913"
     CDS             272..1708
                     /locus_tag="ACJJDL_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HGG7574564.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFSWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLGGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RALNIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRDALCRLKYLAPLSWFVTFHFVCLSFVVFNTANPD
                     DAGAVFSALFANASGWNAPQQADMLLLASFASVMLLYPYLQRAFDGVVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1719..2702
                     /gene="patB"
                     /locus_tag="ACJJDL_001914"
     CDS             1719..2702
                     /gene="patB"
                     /locus_tag="ACJJDL_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HGG7574565.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGVALQENAYALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGET
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2699..3892
                     /locus_tag="ACJJDL_001915"
     CDS             2699..3892
                     /locus_tag="ACJJDL_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HGG7574566.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKIRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQIQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
BASE COUNT          878 a         1342 c         1051 g          842 t
ORIGIN      
        1 aacgtcggta tcggcagcgg cgcactgttg ggacattggg taacgcaata tgtcggtatt
       61 tcccgtatcg gcatcgccgg tatgcttgcg gcggcggccg ggctgtggct gtgcctgaac
      121 ttgaaccgcc atatccgaac ctgacccgcg atgccgtctg aagcctctcc cgcccttcag
      181 acggcatttt gattgaagaa atatccaccc ctgcttaaaa taacgggctt tgccgtgttt
      241 taacgcctat tttttgttcc aaggatggtt tatgccgctg ctgtctgtcg agttcgcact
      301 gttctttctc gccttcctgc cgatttactg gggcttggcg aaatacccgt ccgtccaaaa
      361 cctgctgctt ttggctgccg gtatgggctg gctctaccat atcggccccg tatttgcggc
      421 aatcgtcgtc ctttattcct cctgcgtgta ccttttgggc gaactgctcc gttccgatcg
      481 cgaaaatacg cgccgctttt ggctggggtg cggcattgcc gtctcgctga ccgtcttggg
      541 ctttttcaaa tatttcgact ttttccgccc gctgattgcc caatatgccg gaaaaggcgg
      601 cgcaatcgac atcctgatgc cgctggggct ttcgtattac accttccagt cgctcgccta
      661 tctggtttac tgcttccgcg ccccgcacgc tgcgcgtttc agctggcacg agctgctact
      721 acacctgagt ttctttccca ccgttacctc tggcccgatt atccgcgccg ccgcattcaa
      781 aagcgcggac ggcgagcagg cgggcgcatt ggcgcaaatc cgtacccgcc aaccgcgctc
      841 acccgtccgc cccgcactcg ccgtttccct gattctgctg ggtattgcca aaaaatggtg
      901 gctggcgggg atgctggcgg aaaactgggt gtcgcccgta tttgaaaatc ccgcccaatt
      961 cgacggctgg ggcgtattgg gcggcgtgta cggctatacc ttccaactct ttttagactt
     1021 ttccggatat tccgatttgg ttatcggcat ggcgatgctg ctgggtttcc ggctgcccaa
     1081 aaacttctcc gcaccgcttc gtgctttaaa catccgcgca ttttgggaca aatggcacat
     1141 cagcctttcc acctggatac gcgactacat ctacatcccc ttgggcggca gcaaaaaagg
     1201 ctttttacgg acacagctca acctgatggc ggcaatggta ctctccggca tatggcacgg
     1261 ctacggctgg aacttcctca tttggggcgc gctgcacggc acggcgctgg tgctgctcaa
     1321 cacgggcgac cgttatttcg gacgcgacgc gctatgccgt ctgaaatacc ttgcgccgct
     1381 ctcgtggttt gttaccttcc attttgtctg ccttagcttt gtcgtcttca ataccgcaaa
     1441 ccccgacgat gccggcgcgg ttttcagcgc gctctttgcc aatgccagcg gctggaatgc
     1501 gccgcaacag gcagacatgc tgctgcttgc ctcgtttgca tccgtgatgc tgctctaccc
     1561 ttacctgcaa cgcgctttcg acggcgtggt caaaggtttg gaaaaaatcc cgatgtggct
     1621 gtggtttatc cccgtttccg ccgtcctgct gctgattatc gtcctcgccc cctcggggat
     1681 acccggcttt atttatgcca atttttaagg gtttggacat gaaaaacttt ctttcccttt
     1741 tcgcctccat attgatgtct gccctgattg ccgtgtggtt cagccaaaac cccatcaacg
     1801 cctactggca gcagacctac caccgcaaca gcccgctcga accgctcgcc gcctacggat
     1861 ggtggcggag cggtgtggcg ttgcaagaaa acgcctacgc cctttcagac ggcatcaaag
     1921 ccttcctgtc cggcgaaacg ccgccgacgg ctcaagacgg cggttcggca gatatgccgt
     1981 ctgaagccgc cgcatcagaa gccgtccctc aaaccggtga aacagaatgg aaacaagaca
     2041 ccgaagccgc cgccgtccgc agcggcgaca aagtcttttt tgccggcgac tcgctgatgc
     2101 agggcgttgc acccttcgtg caaaaaagcc tgaaacagca atacggcatc gaatccgtca
     2161 acctcagcaa acaaagcacg gggctgtcct acccctcatt cttcgactgg ccgaaaacga
     2221 ttgaagaaac cctgaaaaaa catcccgaaa tcagcgtgct cgccgtcttc ctcggcccga
     2281 acgacccgtg ggatttcccc gtcggcaaac gatacctcaa attcgcttcc gacgaatggg
     2341 cgcaagaata cctgaaacgc gtcgaccgca tccttgaagc cgcacacacg caccgcgtcc
     2401 aagtcgtctg gctcggcatc ccctatatga aaaaagccaa gctcgacggg cagatgcgct
     2461 acctcgacaa actgctttcg gaacacctgg aaggcaaaat catcctgatt cccaccgcgc
     2521 acaccctgag cggcggggaa gaccgctaca ccgactccgt caacgtcaac ggcaaacccg
     2581 tccgctaccg cagcaaggac ggcatacact ttaccgccga aggacaaaaa ctgctggcgg
     2641 caaaaataat ggaaaaaatc gtttttgaac caagtacgca accatcaagt acacagccat
     2701 gaaccccaaa cacctcatcg cattttccgc cctgttcgcc gccacgcagg cagaagccct
     2761 gcccgtcgcc tccgtcagcc tcgacaccgt taccgtttcc ccgtccgccc cctacaccga
     2821 tacaaacggg ctcttgaccg actacggcaa cgccgccgcc tcgccttgga tgaaaaaaat
     2881 ccgatccgtc gcacaaggca gcggcgagac cttccgcatc ctgcaaatcg gcgactcgca
     2941 taccgccggc gacttcttta ccgacagcct gcgcaaacgc ctgcaaaaaa cttggggcga
     3001 cggcggcata ggctgggttt accccgccaa cgtcaaaggg cagcgcatgg cggcagtccg
     3061 gcacaacggc aactggcaaa gcctcaccag caggaacaat agcggagact tcccgctcgg
     3121 cggcatcctc gcccacaccg gcagcggcgg cagcatgacc ctgaccgcat cggacggcaa
     3181 gaccggcaaa cagcgcattt ccctgtttgc caaacccctg ctcgccgaac aaaccctgac
     3241 cgtcaacggc aacaccgtct ccgccaacgg cggcggctgg caggtactgg atacccgcgc
     3301 ggcactgccc ttgaccatac agaccgaaat gccgtgggac atcggcttca tcaacatcga
     3361 aaatcccgcc ggcggcatta ccgtttccgc catgggcatc aacggcgcac aattgaccca
     3421 ttggtcgaaa tggcgtgccg accgtatgaa cgaccttgcc caaaccggcg ccgatttggt
     3481 tatcctttcc tacggcacca acgaagcctt cggcgacaac atcgacattg ccgacaccga
     3541 acaaaaatgg ctggataccg tccgccaaat ccgcgacagc ctgcctgccg ccggcatcct
     3601 catcatcggc gcacccgaat ccctgaaaaa cacgctcggc gtatgcggca cacgccccgt
     3661 ccgcctgacc gaagtccaac agatacagcg gcgcgtcgcc cggcagggac aaaccatgtt
     3721 ctggtcttgg caaaacgcca tgggcggcat atgcagcatg aaaaactggc tcaaccaagg
     3781 atgggccgcc aaagacggcg tacacttctc cgccaaaggc taccggcgcg cggcggaaat
     3841 gctcgccgac agcctcgaag aactcgtccg cgccgctgca atcaggcaat aatcggacag
     3901 gaggcggacg gtatttccgc aacaggggga tgccgtctga aacgcatacc ttcatattgc
     3961 ttcagacggc atagccaccc cgcgcacggt ttgccggacg caaccggcat tcgcctcaag
     4021 catcggaagg acgggggcga acctccggca tacggcgcaa aggcggcgtt tgatatgccg
     4081 tctgaaggca aagatgataa actgccgcct tcc
//
LOCUS       DBBZYD010000126         4000 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.126, whole genome shotgun sequence.
ACCESSION   DBBZYD010000126 DBBZYD010000000
VERSION     DBBZYD010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.126"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(64..1314)
                     /gene="glyA"
                     /locus_tag="ACJJDL_001916"
     CDS             complement(64..1314)
                     /gene="glyA"
                     /locus_tag="ACJJDL_001916"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HGG7574567.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSAIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLENVRKQITALCDKYTVYGA"
     gene            complement(1469..1732)
                     /locus_tag="ACJJDL_001917"
     CDS             complement(1469..1732)
                     /locus_tag="ACJJDL_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574568.1"
                     /translation="MSNQTKIQAIKQASEQIFAICETPNTALQAIHLILRHGGAGELS
                     WQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDVLPLGSLVLT"
     gene            complement(1795..3570)
                     /gene="ggt"
                     /locus_tag="ACJJDL_001918"
     CDS             complement(1795..3570)
                     /gene="ggt"
                     /locus_tag="ACJJDL_001918"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036374 - glutathione hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HGG7574569.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGNYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(3738..4000)
                     /locus_tag="ACJJDL_001919"
                     /pseudo
     CDS             complement(3738..4000)
                     /locus_tag="ACJJDL_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
BASE COUNT          997 a          951 c          943 g         1109 t
ORIGIN      
        1 gcctgaaaca ttgtgagatt tcaggcggca ttggattgct tggcggaata tttttaaaaa
       61 ggcttacgcg ccgtaaacgg tgtatttgtc gcagagggcg gtaatctgtt tgcggacgtt
      121 ttccagattc gcttcgtctt cggggttaga caatacgtcg gcaaccaagt tcgccaatac
      181 gcgcgcgtcg gcttcgttaa aaccgcgtgt ggtcatggca gcggagccga tgcggatgcc
      241 ggaggtaacg aagggttttt ccggatcgtt cgggatggcg tttttgttga cggtgatgtg
      301 cgctttgccc aaagcggctt cggcggcttt accggtgatt ttcatcggtt gcaggtcgac
      361 gaggaaaacg tggctttcgg tgcggccgga aacgatgcgc aaaccgcgtt taaccaactc
      421 ttctgccatg gcggcagcat tgattttcac ttgttttgcg tattgtttga actcgggttg
      481 caacgcttct ttaaacgcta cggctttggc ggcgatgacg tgcatcagtg gaccgccttg
      541 taggcttggg aagatggcgg agtttaacgc tttttcgtgg gtattgtcgc ggcacaaaat
      601 cacgccgccg cgagggccgc gtagggtttt gtgggtggtg gtggtcacga agtcgcagaa
      661 tggcacgggg ttgggatatt cgccaccggc aatcagtccg gcatagtgcg ccatgtcgac
      721 aaagaggtat gcgccgactt tatcggcgat ctcgcggaat tttgcccagt cgatttgcaa
      781 cgcgtaggca gacgcaccgg ccacaatcat tttaggtttg tgttcgagag ccaagcgttc
      841 cacttcggca taatcgagca cttcgttttc atccaaacca taagtaacgg cattgtagag
      901 tttgccggaa atattaacgc tcgcgccgtg ggtcaggtgg ccgccgtgcg ccaaagacat
      961 acccaaaatg gtgtcgcccg gttttaaaac ggaagcgtac acggcttggt tggcttgcga
     1021 gccggagtgc ggttgaacgt tggcgtattg cgcgccgaac agttttttga cgcggtcgat
     1081 tgccaattgt tcgacaatat cgacgtattc gcagccgccg tagtagcgtt tgccggggta
     1141 gccttcggcg tatttgttgg tcagctggga accttgcgct tccattacgg cgcagctgac
     1201 gtagttttca gaggcaatca gctcgacgtg gtcttgctgg cgttggtctt cttgggcaat
     1261 ggctgctgcc aaatcggggt catattgtgc gagggtaacg ctttttgaaa acatgttctc
     1321 ggctcctttg tgtaatcagg gtatcatgag tgttttttgt ataaaaaaat acttcaaaac
     1381 ctaaggcaga tagtccataa tgcgtaaatt ttctttggca ttatcaggta atttatttaa
     1441 catgctggtt tttagcgtct cattaccttt atgttagtac aaggctaccc aaaggcaata
     1501 catcaaatgg taaattttcg gcagtttgtg caaaatcaat caaataacca gcaccaacca
     1561 catctttatc agccataacc cgctgataca ccacttgcca agacaactct cctgccccac
     1621 catgtcttaa aatcagatga atggcttgta atgctgtgtt tggcgtctca caaattgcga
     1681 agatctgctc agaagcttgc ttgatggctt gtatttttgt ttgattactc acaatttccc
     1741 cctattttaa tattaactta atgcggtcaa attcacaaaa tacaagcttc acctctaatc
     1801 acccatcact cgaccttctc ggcgtggatc ggcaccacca accagcctgc ttggctcgat
     1861 aataatggct tgaacacctg aatttagctc acgcacgtca gtcttatagc ccaaatcatt
     1921 taatgcttgt tgccactgga gggcggttgt acccgtttct agttcatagt taccaaagcg
     1981 atttaataaa ttgggtgcac tgatggcatc ttggatatcc atattccagt cactatgtgc
     2041 cacaatcgtc ttagcgacat agccaatgat acggctacca cctggggagc cgattgccat
     2101 ataaggcttg cctgctttaa atacgatggt tggtgccatt gaggagcgtg gtctcttgcc
     2161 gggctcgaca cgattggcga cctgtttgcc ctgctttatt ggctcaaaac taaagtctgt
     2221 cagctcatta ttcagcaggt agccatttgc catcaaagtt gagccaaacg cattttcaat
     2281 ggaagtcgtc attgatagca cattgcccgc cttatccaca attgatatat gactggtaga
     2341 aggtaactca atcgcttgtg aggacaccca ctcatgaata aaatcgcctg cagatacgct
     2401 aggcaatgcc ttatccgact gctcaagcag ctggctgcga tgttttaggt agtctttaga
     2461 aatcaactgg cgaatgggta ctggtacaaa atcagggtcg cccaaatata catcacgatc
     2521 cgcaaacgca agcctagaag cgtcgcccaa gagacgtaaa ccttcagcat cataccccac
     2581 ctgattgggt gaaaattcat ttaaaatccc caaaatttga cccacagcaa tcccacctga
     2641 gcttggtgca cccataccgc atacttcata aatacgataa gtcacacaaa caggcgggcg
     2701 ttccaccact tgataatcag ataaatcttg taaggataat tgaccggggt tatccttagc
     2761 attttggaca actgaaacga tattttgggc atatttacca gtatgcagag cttttgcacc
     2821 ttgagctgct aacgcctgaa cactgtcagc aaattctaaa tttttcagca agctgcctgc
     2881 ttgtagcggc acaccattcg gcaaaaaata agcggctgtt tttggatagc gtgccaaatg
     2941 ctgctgattt tgctcaaccg agatggcaag ccttggcgac acctcaaagc cttgttttgc
     3001 caagcggatc ggtgtatcaa ataattttcc ccaaggcaat acaccgtatc gctgatgtat
     3061 tgtctccatc agtttaggga tagcaggcgt acccaccgag cgaccaccga ccaccgcttc
     3121 cataaatttc aatggttgac catctttatc caaaaataat tccggcgtcg cacgcatcgg
     3181 tgccgtctca cgcccatcaa atgtggtcaa tgttttggcg gtattatccc aatacaacac
     3241 aaatgcacca ccgcccaagc ctgacgactg tggctctacc aagcttagtg tcgtctgcac
     3301 cgccaccatc gcatctgcag cgctaccgcc ttgctttaag atatcatagc cagcttgtgt
     3361 tgctaatgga ttggctgacg ctaccataaa atcacttgca atcacctgct tttgttcgat
     3421 cagtcccgtt gcatgttcag gcgtgtgagc gtctgcacct gtgatgacag cagaatgagt
     3481 attaacctta ccttgattgg catggatgac ttgacatcca gagattgtca tagacattat
     3541 caatgcagtc aataaatatg ttttagccac aagcactcct tcgcctgagt ttgattgatg
     3601 attcatacaa ggcatgctga ttattgtatt taatatggct aaataattca atccaaacta
     3661 tcaatcttga ccatcaaaaa aagaccgcta atgtcatcag cagtcttttt tgatatttat
     3721 tttaagatat taagtaatca gacctttggg ctatgctctt caatgagtgg ttttagctca
     3781 cctgattggt acatttgtag gataatatca ctaccaccga ttaactcacc attaacccaa
     3841 agctgtggaa aggttggccg attggcgatg agtggtagag tactgcgaat ttctgggttt
     3901 tctaggatat taacaaaagc aaagggtctg ccaattgggt cagcacctct actgcacgcg
     3961 ctgaaaatcc acattgggga aactggggcg tgcctttcat
//
LOCUS       DBBZYD010000127         3812 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.127, whole genome shotgun sequence.
ACCESSION   DBBZYD010000127 DBBZYD010000000
VERSION     DBBZYD010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3812
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.127"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            362..3568
                     /gene="nalP"
                     /locus_tag="ACJJDL_001920"
     CDS             362..3568
                     /gene="nalP"
                     /locus_tag="ACJJDL_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HGG7574570.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGGTSAPDFNAG
                     GTGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLH
                     TGDFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYN
                     ENYKNYTAYMRKEAPEDGDGKDIEASFDDEVVIETEAKPTDIRHVKEIGHIDVVSHII
                     GGRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGT
                     TSRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLF
                     IFSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSA
                     PYEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGA
                     VGVDSKFGWGLLDTGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGG
                     SQLQLHGNNTYTGKTVIEGGSLVLYGNNKSDMHVETKGALIYNGAASGGSLNSDGIVY
                     LADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAGY
                     LNRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGN
                     AARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPG
                     IRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDH
                     NATGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTWS
                     ENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTL
                     MQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLA
                     GLKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAG
                     LGADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1031 a         1033 c         1015 g          733 t
ORIGIN      
        1 agccgcagac agtacggaac cgattcactt gttaaagaat cgttctcttt gagctaaggc
       61 gaggcaacgc cgtactggtt tttgttcatc cactataact agggaaattc aaattaagtt
      121 agaattatcc ctatgagaaa aagccgtcta agccggtata aacaaaataa actcattgag
      181 ctatttgtcg aaagttcaaa tttccatttt aaaacaatta gtaaaatcga gtttatccta
      241 gttgtccaag acaaccccta taataatata attcaaaata taaaaacggg ttacatctaa
      301 acattacgga atttttattc cctcgcctga attctattgt cagattcaag gagacctcat
      361 catgcgaacg accccaacct tccctacaaa aactttcaaa ccggctgcca tggcgttagc
      421 tgttgcaaca acactttctg cctgcttagg cggcggcgga ggcggcactt ctgcgcccga
      481 cttcaatgca ggcggtaccg gtatcggcag caacagcagg gcaacaacag cgaaatcagc
      541 agcagtatct tacgccggta tcaagaacga aatgtgcaaa gacagaagca tgctctgtgc
      601 cggtcgggat gacgttgcgg ttacagacag ggatgccaaa atcaatgccc cccccccgaa
      661 tctgcatacc ggagacttta caaacccaaa tgacgcatac aagaatttga tcaacctcaa
      721 acctgcaatt gaagcaggct atacaggacg cggggtagag gtaggtatcg tcgacacagg
      781 cgaatccgtc ggcagcatat cctttcccga actgtatggc agaaaagaac acggctataa
      841 cgaaaattac aaaaactata cggcgtatat gcggaaggaa gcgcctgaag acggagacgg
      901 taaagacatt gaagcttctt tcgacgatga ggtcgttata gagactgaag caaagccgac
      961 ggatatccgc cacgtaaaag aaatcggaca catcgatgtg gtctcccata ttattggcgg
     1021 gcgttccgtg gacggcagac ctgcaggcgg tattgcgccc gatgcgacgc tacacataat
     1081 gaatacgcat gatggaacca agaacgaaat aatgtctgca gccatccgca atgcatgggt
     1141 caagctgggc gaacgtggcg tgcgcatcgt caataacagt tttggaacaa catcgagggc
     1201 aggcactgcc gaccatttcc aaatagccaa ttcggaggag cagtaccgcc aagcgttgct
     1261 cgcctattcc ggcggtgata aaacagacga gggtatccgc ctgatgcaac agagcgatta
     1321 cggcaacttg tcctaccaca tccgtaataa aaacatgctt ttcatttttt cggcaagcaa
     1381 tgacgcacaa gctcagccca acacactgac cctattgcca ttttatgaaa aagacgctca
     1441 aaaaggcatt atcacagttg caggcgtaga ccgcagtgga gaaaagttca atggctccaa
     1501 ccattgcgga attactgcca tgtggtgcct gtcggcaccc tatgaagcaa gcgtccgttt
     1561 cacccgtaca aacccgattc aaattgccgg aacatccttt tccgcaccca tcgtaaccgg
     1621 cacggcggct ctgctgctgc agaaataccc gtggatgagc aacgacaacc tgcgtaccac
     1681 gctgctgaca acggctcagg acatcggtgc agtcggcgtg gacagcaagt tcggctgggg
     1741 actgctggat acgggtaagg ccatgaacgg acccgcgtcc tttccgttcg gcgactttac
     1801 cgccgatacg aaaggtacat ccgatattgc ctactccttc cgtaacgaca tttcaggcac
     1861 gggcggcctg atcaaaaaag gcggcagcca actgcaactg cacggcaaca acacctatac
     1921 gggcaaaacc gttatcgaag gcggttcgct ggtgttgtac ggcaacaaca aatcggatat
     1981 gcacgtcgaa accaaaggtg cgctgattta taacggggcg gcatccggcg gtagcctgaa
     2041 cagcgacggc attgtctatc tggcagatac cgaccgatcc ggcgcaaacg aaaccgtgca
     2101 catcaaaggc gatctgcagc tgggcggcga aggtacgctg tacacacgtt tgggcaaact
     2161 gctgaaagtg gacggtacgg cgatgaccgg cggcaagctg tacatgtcgg cacgcggcaa
     2221 aggggcaggc tatctcaacc gtaccggaca acgtgttccc ttcctgagtg ccgccaaaat
     2281 cgggcgggat tattctttct tcacaaacat cgaaaccgac ggtggtctgc tggcttccct
     2341 cgacagcgtc gaaaaaacag cgggcagtga aggcgacacg ctgtcctatt atgtccgtcg
     2401 cggcaatgcg gcacggactg cttcggcagc ggcacattcc gcgcccgccg gtctgaaaca
     2461 cgccgtagaa cagggcggca gcaatctgga aaacctgatg gtcgaactgg atgcctccga
     2521 atcatccgca acacccgaga cggttgaaac tgcggccgcc gaccgcacag atatgccggg
     2581 catccgcccc tacggcgcaa ctttccgcgc agcggcagcc gtacagcatg cgaatgccgc
     2641 cgacggtgta cgcatcttca acagtctcgc cgctaccgtc tatgccgaca gtaccgccgc
     2701 ccatgccgat atgcagggac gccggctgaa agccgtatcg gacgggttgg accacaacgc
     2761 tacgggtctg cgcgtcatcg cgcaaaccca acaggacggt ggaacgtggg aacagggcgg
     2821 tgttgaaggc aaaatgcgcg gcagtaccca aaccgtcggc attgccgcga aaaccggcga
     2881 aaatacgaca gcagccgcca cactgggcat gggacacagc acatggagcg aaaacagtgc
     2941 aaatgcaaaa accgacagca ttagtctgtt tgcaggcata cggcacgatg cgggcgatat
     3001 cggctatctc aaaggcctgt tctcctacgg acgctacaaa aacagcatca gccgcagcac
     3061 cggtgcggac gaacatgcgg aaggcagcgt caacggcacg ctgatgcagc tgggcgcact
     3121 gggcggtgtc aacgttccgt ttgccgcaac gggagatttg acggtcgaag gcggtctgcg
     3181 ctacgacctg ctcaaacagg atgcattcgc cgaaaaaggc agtgctttgg gctggagcgg
     3241 caacagcctc actgaaggca cactggtcgg actcgcgggt ctgaagctgt cgcaaccctt
     3301 gagcgataaa gccgtcctgt ttgcaacggc gggcgtggaa cgcgacctga acggacgcga
     3361 ctacacggta acgggcggct ttaccggcgc gactgcagca accggcaaga cgggggcacg
     3421 caatatgccg cacacccgcc tggttgccgg tctgggcgcg gatgtcgaat tcggcaacgg
     3481 ctggaacggc ttggcacgtt acagctacgc cggttccaaa cagtacggca accacagcgg
     3541 acgagtcggc gtaggctacc ggttctgacg gacaggaagc agacagccgc aaagatcacg
     3601 gtctttgcgg ctgtttctta tgaaaagaaa accctattcc aattgcctgc ttctattgtt
     3661 tcaagacttc ttccaaagat tcggcattaa tcagatgtat agcggattaa caaaaatcag
     3721 gacaaggcgg cgaagccgcg gacagtacaa atagtacgga accgattcac tcggtgcttg
     3781 agcaccttag agaatcgttt ctttgagcta ag
//
LOCUS       DBBZYD010000128         3711 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.128, whole genome shotgun sequence.
ACCESSION   DBBZYD010000128 DBBZYD010000000
VERSION     DBBZYD010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.128"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(850..1239)
                     /locus_tag="ACJJDL_001921"
     CDS             complement(850..1239)
                     /locus_tag="ACJJDL_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HGG7574571.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSEAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(1812..1937)
                     /locus_tag="ACJJDL_001922"
                     /pseudo
     CDS             complement(1812..1937)
                     /locus_tag="ACJJDL_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(1983..3116)
                     /gene="carA"
                     /locus_tag="ACJJDL_001923"
     CDS             complement(1983..3116)
                     /gene="carA"
                     /locus_tag="ACJJDL_001923"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HGG7574572.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAEDVLALNPDGVFLSNGPGDPEPCTYAIKAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT          800 a          972 c         1001 g          938 t
ORIGIN      
        1 atttatcaat atcttccatt tggtttatat attgtctcat aataagcaag ccgtagctcg
       61 catgcagggt gtgtgcggta cgcacgcgtt ctccattttc cctgcaaccc caacccaccg
      121 tgtgcgtgcc ttgcggcaca caccctaccg atgggttcaa aggtcgtctg aaaaaacgct
      181 cgcggcgttt gttccatctg ccttgcgata aaggctgcct gaaaaattcc cgctgttgat
      241 atttcgggca ttctttctca aaccgcctgc aaccgcaaaa tccgctgcaa cctgccccct
      301 cccccgtggg ggagggttgg ggagagggca ttccccgaat ttcggcaacc tttcccaaca
      361 actcaaccac cgaaatacaa gccttgtggc ttgttgccct ctctctagct ctctcccacg
      421 ggagagagga cggagtggct gtagggctaa gggttctgca aggaaacagg ttgtgcaggt
      481 tgctttttgc ttttcagacg acctgaaatc aacggtaaat ccaagtcgct tttcaaaccg
      541 cctgcaaccg caaaatctgc tgaaacctac tccctccccc gtgggggagg gctggggaga
      601 gggcattctc cgaatttcgg caacctttcc taacactcta accgccaaga cacaagcctt
      661 gcggcttgtt gccctctctc tagctctctc ccacgggaga gaggatgggg tggctgttgg
      721 ggctaaggtt tctgtaaact aatcaggtta tgcaggctgc tttttgtttt tcagacggcc
      781 tttataaatg ctcaattcag tcggctttat cctattattt tcaataatcc aatcaaaatc
      841 agccatctgc tatcgtgcag cttgcttttc caattcttgc aacacgagca ggatttctgt
      901 cagcacatcg tttgtctgct gtaaaatctc gtgattccaa aaccgcagta cggtaaagcc
      961 caagctgttg agatatgccg tccgcgcgtg gtcgtatgcg gcttgttctg tgtgctgccc
     1021 tccgtctgct tcgacaatca acttgggcgt tacgcacata aaatcaacaa tatagtttcc
     1081 catcggctgc tggcggcgga atttatagcc gttcagacgg cctgcccgca ggtgctgcca
     1141 caattttgct tccgcctcgc tcatttcttg gcgcatggct ttggcgcgtt ggcgcaagat
     1201 ggggttgtcg gtggtcaaga gtttctcgtg cgggttcatt ttgttgtcgt gctgtttgct
     1261 gccctctctc taactctctc ccacggggag agaggacggg gcggttgttg gggttaaagg
     1321 ggctgtaagg aaaacaagtc gttcaggcca ctttttactt ttcagacgac ctgcaatcaa
     1381 cggttgtaaa tccaagttgc ttttcaaacc gcctgtaacc gcaaaacttg ctgcaaccta
     1441 ccccctcccc cgtgggggag ggctggggag agggcattct ccgaatcgcg gcaatctttc
     1501 cctaattccc taactgcctc aatacaagcc tttcggcttg ttgccctctc tctaacgctt
     1561 tcccacggga gagaggacgg tgcggctgta gtgattaagg gttttgcaag gaaaacaagg
     1621 aaaacaagtt gtacaggctg ttttttattt ttcaagcgac ctgaaatcaa cgcttgtaaa
     1681 tccaagtcgc ttttcaaact gcctgcaacc gcaaaatctg ctgcaaccta ccccctcccc
     1741 cgtgggggag ggctggggag agggcatttt ccaagttgcg gcaatctttc ccaaatccct
     1801 tagtcttcta aaatacaagc cttacggttg ttgccaaatg aaacttcttc catacccaaa
     1861 acttgcgtgt aaaacgcaat ggttcggtca atgtcggcaa cggtcagtac cagatggtcg
     1921 agtgcgctaa tcttcatttc ccgctttctt tttcaggcgg cggcagtgcc gtctgaaagc
     1981 cattatgccc gttttgccgc tttcatattg ccaatgaatt tgtcaaacaa atagccgaca
     2041 tcttgcggac cggggctggc ttcggggtgg ccttggaagc agaacacagg tttgtcggtc
     2101 agctcgatgc cttgcaaagt gttgtcaaac aaggatttgt gggtaatgcg tgcgttagcg
     2161 ggcagggtgt cggcatcaac ggcaaaaccg tggttttggc tggtgatgac gactttgccg
     2221 ctgtccaaat cttgcacagg gtggttcgca ccgtggtggc tgaagcgcat tttcagggtt
     2281 ttcgcgccga tggcgaggct gatgagctgg tgtcccaagc aaatgccgaa aatcggtttg
     2341 ccgctttcca tcagtttttg tacggctttg atggcgtagg tgcaaggctc ggggtcgccg
     2401 gggccgttgg ataggaatac gccgtcaggg ttgagtgcca acacgtcttc cgcgctcgtt
     2461 tgggcgggga cgacggtcag gcggcagccg cgcgaggcga gcatacgcag gatgttggtt
     2521 ttcacgccga aatcgtaggc gacgacgtgg taaggctgtt cgtcaggggt aacgaaaccc
     2581 ttgcccaatg cccattcgcc ttccgtccat tcgtaagttt ccgtgcagga aacttctttt
     2641 gccaagtctt tgccgaccat actgccgaac gcggcgatga gttcttgcgc tttttcgatt
     2701 gtggcatccg caccggtcag aatcgcgccg ccttgcgcgc ctttttcgcg caacagcgtg
     2761 gtcaggcggc gggtatcgat gtcggcgatg gcgacggttt tgttgcgtac cagatagtcg
     2821 tgcaggcttt cggaggcgcg gaagttgctg tgcaagagcg gcaggtcgcg gataatcagg
     2881 ccggcggcat aaacgctgcg gctttcttca tcttcggcgt tggtgccggt gttgccgatg
     2941 tgtgggtagg tgagggtaac gatttgtttg cagtaggacg ggtcggtcag gatttcctga
     3001 tagccagtca tcgaagtatt gaacacgact tcgccggaag tcgaaccttc gtaaccgatt
     3061 gatgtgccgt ggaatacgct gccgtcagcg aggacgagga gggcgggggt gctcatgatg
     3121 ggaatcctgt ttttaataaa attcttgaca atgccgtctg aagggacttc ggcagggggc
     3181 atccggtcgg aaaaatccgg tcaaaaaaaa acacgccgcg caagatagac gcgtaacgtg
     3241 cttttcgggc aagtgcctat accctgaaag cagcatattt taagacgaaa catacccgat
     3301 ttcaagcgca aacgcggcag gcgggctgat atgttcgcgc gaaaacggaa atccgtggcg
     3361 taaaaccgcc cgctccgcgc ccactatgcc cgttacgcat ttccccacgt ccgtccggcg
     3421 aaactatggg aatacccgaa tcgtcaggaa tacctgaatc gtcaggaata cctgaatcgt
     3481 caggaatacc tgaatcgtca ggaatacccg aaccgtcatt cccgcgcagg cgggaatcca
     3541 gacctgtcgg cacggaaact tatcgggtac aacggtttct tgagatttta cgtcctagat
     3601 tcccgcctgc gcgggaatga cgcgtttcat ttgccgcccc tcccgaaaaa cgcaaaaaat
     3661 gccgtccgaa aacctttcgg acggcatttt cgcgtgcaaa tcagtagaag a
//
LOCUS       DBBZYD010000129         3677 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.129, whole genome shotgun sequence.
ACCESSION   DBBZYD010000129 DBBZYD010000000
VERSION     DBBZYD010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.129"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..329
                     /locus_tag="ACJJDL_001924"
     CDS             <1..329
                     /locus_tag="ACJJDL_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HGG7574573.1"
                     /translation="TEEGIAQTVVKGKTTRAEVEARFGKRNPFGCYAYHEVSLPIYNF
                     LPTNFIYMKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVIRKEAGKS
                     LSQPEK"
     gene            393..1676
                     /gene="hemL"
                     /locus_tag="ACJJDL_001925"
     CDS             393..1676
                     /gene="hemL"
                     /locus_tag="ACJJDL_001925"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HGG7574574.1"
                     /translation="MNRNEILFDRAKAVIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIVIAEQIAEI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPTEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FQTAADAAGIEFTADSVGGMFGLYFASHTPQNYGDMARSNIEGFKQFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1892..2164)
                     /locus_tag="ACJJDL_001926"
     CDS             complement(1892..2164)
                     /locus_tag="ACJJDL_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HGG7574575.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2175..2738)
                     /gene="orn"
                     /locus_tag="ACJJDL_001927"
     CDS             complement(2175..2738)
                     /gene="orn"
                     /locus_tag="ACJJDL_001927"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HGG7574576.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2756..3643)
                     /gene="prmA"
                     /locus_tag="ACJJDL_001928"
     CDS             complement(2756..3643)
                     /gene="prmA"
                     /locus_tag="ACJJDL_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HGG7574577.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQIAAQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQIEELSGIYSQWF
                     DLDPAETEEGWARLSGTKR"
BASE COUNT          775 a          943 c         1060 g          899 t
ORIGIN      
        1 agacggaaga gggaatcgca caaacggttg ttaaaggcaa aacgacccgg gcggaggtag
       61 aggcacgttt cgggaagcgc aaccctttcg gttgttatgc ctatcacgag gtcagcctgc
      121 cgatttataa ttttttgccg accaatttca tttatatgaa atcagaacgc cgacattggg
      181 agtggtgtgt ggattacgac tgggaaggag ttgtccggga ctaccgcttt acacataaag
      241 tggaaaaaga cgagcgttcc gtcatccggg atgcggttgg cgtcatccgc aaagaagcag
      301 gcaaatcctt gtcgcaacct gaaaaatgat aaaatgggac tttctgcttc taagcccgaa
      361 acctgccgtt cagacggcat ttgaggataa atatgaaccg taacgaaatt ttattcgacc
      421 gcgccaaggc ggtcatcccc ggcggcgtga attcccccgt gcgcgcattc ggcagcgtcg
      481 gcggcgtacc gcgcttcatc aaaaaagccg aaggcgcgta tgtttgggat gaaaacggca
      541 cgcgctacac cgactatgtc ggctcttggg gccctgcgat tgtcggacac gcgcaccccg
      601 aagtcgtcga agccgtgcgc gaagccgcgt tgggcggttt gtcattcggt gcgcccaccg
      661 agggcgaaat cgtcatcgcc gaacaaatcg ccgaaattat gccgtctgtc gaacggctgc
      721 gcctcgtcag ctccggcacg gaagcgacga tgaccgccat ccgtctggca cgcggtttta
      781 ccggccgcga caaaatcatc aagtttgaag gctgctacca cgggcattcc gacagcctgc
      841 tggtgaaagc cggcagcggc ctgctgacgt tcggcaatcc ttcttccgcc ggtgtgcctg
      901 ccgactttac caaacacacc ttagtcctcg aatacaacaa catcgcccaa ttggaagaag
      961 cctttgctca aagcggcaat gacattgcct gtgtgatttt ggagcctttt gtcggcaata
     1021 tgaaccttgt ccgcccgacc gaagccttcg tcaaagccct gcgcgaattg actgaaaaac
     1081 acggcgcggt gttgatttac gacgaagtga tgacaggttt ccgcgtcgca ctcggtggcg
     1141 cacaatcgct gcacggcatc acgcccgacc tgaccacgat gggcaaagtc atcggcggcg
     1201 gtatgccgct tgccgcgttc ggcggacgca aagacattat ggaatgtatt tccccactgg
     1261 gcggcgtgta tcaggcaggt acattatcag gcaacccgat tgccgtcgcc gccggtttga
     1321 aaacgctgga aatcatccgc cgcgaagggt tttatgaaaa cctgacggcg cgtaccgaac
     1381 agttggttca aggttttcag acggcagcgg atgcggcggg catcgagttc accgccgaca
     1441 gcgtgggcgg tatgtttggt ttgtattttg ccagccatac gccgcaaaac tacggcgaca
     1501 tggcgcgttc caatattgaa ggcttcaaac agtttttcca cggcatgctc gaccgcggca
     1561 ttgccttcgg cccgtccgct tatgaagcag gtttcgtttc tgccgcgcat acgcccgagc
     1621 tgattgatga aacggttgcg gttgcggttg aagtgttcaa ggcgatggct gcatgatgtt
     1681 ttgacggaca gggtttccct gttcaatttg tttggcagat tgaagtaaga atgcacaccg
     1741 ccgtcattcc cgcgcaggcg ggaatccaga cctttcagtt tctgtaatga ttgaaaataa
     1801 cgtgccgaaa tcagccgcac ccggcaggaa gccgccgcca cctgaaacaa tgccgtctga
     1861 agccttcaga cggcatttta tcggaagcgc atcagaaaaa acggatagcg acatatgcgg
     1921 taaaagcaag ggcaattaca tagataaacc cctttataaa ttcaaaagtc tcatctatat
     1981 cgctatattt ttctttcagt tcgtcagatt ttcgataacg tttcattttc aagaccactt
     2041 catgaccaac aagcccgacc ttccggattc ccgcctgcgc gggaatgacg ggcgtgtata
     2101 tttttgattt caatctgctg taaaaatgcc gtctgaaatg caggatttgc gcttcagacg
     2161 gcattgtttg tttcttattg cgcttcggct ctcggggcgg aaatcagaaa gtgttcgcgg
     2221 tagtggcgca tttcttcgat gctctccaaa atgtcgtcca atgccttgtg cgaaccgcgt
     2281 ttgaccacgc ttttggcaac gggcggattc cagcgtttgg caagctcttt gagcgtggaa
     2341 acgtcgaggt tgcggtagtg gaagtagttt tccagtttcg gcatatattt gaccataaaa
     2401 cgccggtctt ggtggatgga gttgccgcac atcggcgtgg cgcgttcggg tacccattcc
     2461 gacataaagt ccagcagttt ctgttcgact tcggcttcgg tatgcgacga ttcgcgtacg
     2521 cgctgcgtca gccccgtcct accgtgtgtg gcggtgttcc actcgtccat attgtcgagc
     2581 agctcgtcgc tttggtggat ggcgtaaact tcggattgcg ccaatacatt caaatccgag
     2641 tcggtaataa tcatcgcgac ttcgataatg cggtcggttt cgggattaag ccccgtcatt
     2701 tccatatcga gccagcatag gttgttttta tcctgcatga tgtttccttt gcttgtcagc
     2761 gttttgtccc gcttaatcgc gcccatcctt cttcggtttc cgcaggatcg agatcgaacc
     2821 attggctgta aatgccgctg agttcttcga tttgttcgtc caacaaaccg gataacacga
     2881 tgcggccgcc ttgtttggtg cgggcggcaa gcatttcgcc gagcatacgt aaagggttgg
     2941 cgaggatgtt ggcaacaact acgtcgaatt gcccttgagg caggccgtcg ggcaggaaga
     3001 attgtgcatc gacgttgttc tgttcggcgt tgtccttgcc ggcgcggacg gcttgttcgt
     3061 caatatcgac gccgacggca gaacctgcgc cgagtttgag ggcagcgatg gtcaggatgc
     3121 ccgaaccgca gccgtagtcg aggacgcttt cgccgttttt gagttgcgta tccagccatt
     3181 tgaggcagag gcgcgtggtt gggtggctgc cagtgccgaa ggcgaggccg ggatcgaggc
     3241 gtaggttgac ggcagtgcct tcgggggctt cgtgccaaga gggggtaatc cacaggcggt
     3301 cggaaattcg gatggggtcg aattgcgatt gcgtgagacg cacccagtct tggtcttcga
     3361 tggtttcgcc ggtgtatgcc aagtctttta acccgcattc ttgtgcggcg atttggatga
     3421 tggcggcggc ttcgtcgtgt tcgccgaaca gggcgatgac tttgctctgc tgccagattt
     3481 gttcggcggg cataccgggt tcgccgaaaa tcgcctgttc gttttgcgtg ccggcgtagg
     3541 catcttcgat ggcggcggag agtgcgccgt gttccatcag cgcgtcggcg aggcgttcgg
     3601 cgacggcatc gttgacgttg acggtgattt gttggtaggg cataacgggc tttcttggaa
     3661 atatagtgga ttgaatt
//
LOCUS       DBBZYD010000130         3589 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.130, whole genome shotgun sequence.
ACCESSION   DBBZYD010000130 DBBZYD010000000
VERSION     DBBZYD010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.130"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            310..1782
                     /gene="pyk"
                     /locus_tag="ACJJDL_001929"
     CDS             310..1782
                     /gene="pyk"
                     /locus_tag="ACJJDL_001929"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HGG7574578.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQAEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            2090..3490
                     /locus_tag="ACJJDL_001930"
     CDS             2090..3490
                     /locus_tag="ACJJDL_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
                     /protein_id="HGG7574579.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNDRHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMN
                     SLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARF
                     KNHADIIGLQYTYKFK"
BASE COUNT          930 a         1068 c          905 g          686 t
ORIGIN      
        1 agctcaatga gtttattttg tttatactgg cttagacgac tttttctcat agggataatt
       61 ctaacttaat ttgaatttcc ctagttatct aggacagccc caaaataaat ttagcctaag
      121 tcataaaacc gtgtaatttt gcgccaaaaa aggcggtttg caggtaaaat atcaaactat
      181 taatttaaat catattttta cagaatattc cgccgcgttc atcaaatgga catcaaaccg
      241 gttccaaatt tctgtaattt tgtaacaaaa taccgcaaaa cacccgattg agaccaaaag
      301 gactttcata tgaaccagac aagccgcgat ctgacccgca tcagccacaa cactaaaatc
      361 gtcgccaccc ttgggccggg cagcaacaac gtagaactgt tggaagatat gatccgcgtc
      421 ggcggcctga acgtcgtccg cttcaacttc agccacggca cgcccgaatt ccatcaggaa
      481 aacgcccgca tcgtgcgcga ggcggcaaaa cgcgccggac aggaaatcgc catcattgcc
      541 gacctgcaag ggccgaaaat ccgcgtgggc aaaatcgccg gcggcggcat tgaattgaac
      601 aaaggcgaaa cgctggtact ggatgccgcg ctcgaaggcg aaggcacgcg cgaggcggtc
      661 ggtttggact accgcgacct gcccgacgac gttgccgcag gcgacgtatt gtggctggac
      721 gacggcctgc tgaccctgac cgtggaatcc gtcgaaggca gcaggattat cacaagggtg
      781 gaaaacagcc atgtcctgaa aagcaacaaa ggcatcaaca aacgcggcgg cgggctgtcc
      841 gcaggcgcgt tgaccgaaaa agacttccgc gacctgaaaa ccgcgattgc catcggttgc
      901 gactacctcg ccatcagctt tgtgaaatct gccgaagatt tgcacatcgc gcgcgccaaa
      961 gtcgaagaag aaatgaaggg cagcactgcc gtgcgccccg gtttggtttc caaaatcgaa
     1021 cgcgtagaag cgattgaaaa ccttgatgaa atcatcctcg ccggcgacgg cattatggtt
     1081 gcgcgcggcg acttggcggt cgaagtcgga cacgccgccg tccccgccct gcaaaaacgg
     1141 atgatccgcc gcgcccgcga gttgcgccgc ttcagcatta cggcgacgca aatgatggaa
     1201 tcgatgatta ccaaccccgt gccgacccgc gcggaagtca gcgatgtggc aaacgcggta
     1261 ttggacggta ccgatgcggt gatgtgttcc gccgaaaccg ccgtcggcgc gtatccgttt
     1321 gaaaccgtca gccaaatggc aattatctgc gcggctgcgg aaaaagagca ggattcgctc
     1381 aacggcgttg ccgaacaggc ggagtatccc gaagcggtca gcaccaacct ggcggttgcc
     1441 ggcggcgcgg tcagcgtggc gcgcgcggtt cacgccaaag cgattgtcgc cctgaccgaa
     1501 agcggttcga ccgcctttga aatcagccgc cacaacatca ccctgccgat tttcgcgctg
     1561 accccgagcg tttccgccca acgccgtatg gcgatgtacc gcggcgtgcg cccgctgatt
     1621 ttggcaacca gtaccgacca cgacacggcg ttgaacgaag tcgaaaccat gctggtggaa
     1681 cacaacatcc tgcattccgg cgaccagtac atcatcacca gcggttcgca aatgcgcgaa
     1741 tccggttcga ccaacacact ggaagtgctg cgcgtcaaat aatccgccct gagtggaaaa
     1801 tgccgtctga agccgatgcc cgaggcttca gacggcattt tttgcggcgg cgcggcggtt
     1861 cgggcaaact gaaaaaattg tgcaaatccg gcaacatcgg ataaaattga gtacctatac
     1921 taaagcgaaa caaggcattt ccgactgcct tttttatagt ggattaaatt taaaccagta
     1981 cggcgttgcc ttgccgtact atctgtactg tctgcggctt cgtcgccttg tcctgatttt
     2041 tgttaatcca ctatatttat ccaccgtccg cctttttacg gaaaccgaaa tgaccccttc
     2101 cgcactgaaa aaaaccgtcc tactgctcgg cactgccttt gccgccgcat ccgcacaagc
     2161 ctccggctac cacttcggca cacagtcggt caacgcgcaa agcacggcaa atgccgccgc
     2221 cgcagaagcc gccgacgcat cgaccatctt ctacaaccct gccggcctga ccaaactcga
     2281 cagcagccag atttccgtca acgccaacat cgtgctgccc agcattcatt atgaggcgga
     2341 ttccgccacc gactttaccg ggcttcccgt ccaaggttcg aaaagcggca aaatcaccaa
     2401 aaccacggtc gcgccccaca tctacggcgc atacaaagtc aacgacaatc tgaccgtggg
     2461 cttgggcgtg tacgtcccct tcggctctgc caccgaatac gaaaaagatt ccgtgttgcg
     2521 ccacaacatc aacaaactcg gtctgaccag catcgccgtc gaacctgtcg ccgcatggaa
     2581 actcaacgac cgccattcct tcggcgcagg catcatcgcc caacatactt ccgccgaact
     2641 gcgcaaatat gccgactggg ggattaagag taaagcagag atattgacgg caaaaccgcc
     2701 caaacctaac ggtgtagccg aagctgcaaa aattcaggcc gacggacacg ccgatgtcaa
     2761 aggcagcgat tggggcttcg gctaccaact ggcgtggatg tgggacatca acgaccgcgc
     2821 gcgcgtgggc gtgaactacc gttccaaagt ctcgcacacg ctcaaaggcg atgccgaatg
     2881 ggcggcagac ggcgcggcgg cgaaagcaat gtggagtacg atgcttgcag caaacggcta
     2941 cacggcgaat gaaaaagccc gcgttaaaat cgttacgcct gagtctttgt ccgtacacgg
     3001 tatgtacaaa gtgtccgata aagccgacct gttcggcgac gtaacttgga cgcgccacag
     3061 ccgcttcgat aaggcggaac tggtttttga aaaagaaaaa accatcgtca acggcaaatc
     3121 cgaccgcacc accatcaccc ccaactggcg caacacctac aaagtcggct tcggcggttc
     3181 ttatcaaatc agcgaaccgc tgcaactgcg cgccggcatc gcttttgaca aatcgcccgt
     3241 ccgcaacgcc gactaccgca tgaacagcct gcccgacggc aaccgcatct ggttctccgc
     3301 cggcatgaaa taccatatcg gcaaaaacca cgtcgtcgat gccgcctaca cccacatcca
     3361 catcaacgac accagctacc gcacggcgaa ggcaagcggc aacgatgtgg acagcaaagg
     3421 cgcgtcttcc gcacgtttca aaaaccacgc cgacatcatc ggcctgcaat acacctacaa
     3481 attcaaataa acggcccgcc gtttgattgt agaaatgccg tctgaaacag atttccgttt
     3541 cagacggcat tgttttaggc gcgatttata gtggattaac aaaaatcag
//
LOCUS       DBBZYD010000131         3437 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.131, whole genome shotgun sequence.
ACCESSION   DBBZYD010000131 DBBZYD010000000
VERSION     DBBZYD010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.131"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(79..2244)
                     /gene="fetA"
                     /locus_tag="ACJJDL_001931"
                     /gene_synonym="frpB"
     CDS             complement(79..2244)
                     /gene="fetA"
                     /locus_tag="ACJJDL_001931"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HGG7574580.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNVNGGKT
                     VPYSALDKRSYLAKIGTTFGDDDHRIVLSHMKDQHRGIRTVREEFTVGDKSSRINIDR
                     QAPAYRETTQSNTNLAYTGKNLGFVEKLDANAYVLEKERYSADDSGTGYAGNVKGPNH
                     TRITTRGANFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSKFEISDKKKGADGKEVD
                     VDDAQKEKNRANEKIVHAYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKTH
                     DGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGT
                     KAERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYIKNH
                     GYELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFK
                     NPNLEIGWRGRYVQKAVGSILVAGQKDRSGKLENVVRQGFGVNDVFANWKPLGKDTLN
                     VNLSVNNVFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          776 a          799 c          944 g          918 t
ORIGIN      
        1 taatccacta tatatcaaat tatcagaaca gatgccgtct gaaaggcttt cagacggcat
       61 tttttcggga tgtgcgtttt agaacttgta gttcacgccc aagcgtacat cgcggcccac
      121 gcccggcagg gtattggtcc agcgttggct gtgcggatag tagaacgtgt tgaacacgtt
      181 gttaaccgaa agattaacat tgagcgtgtc tttgcccagc ggtttccagt tggcgaagac
      241 atcgttcaca ccgaaacctt ggcgtacaac gttttccaat ttgccgctgc ggtctttttg
      301 acctgccacc aatatcgaac ccacggcttt ttgaacatag cgtccgcgcc agccgatttc
      361 cagattcggg tttttgaagc ggtaggcaag ggaggctgtc caagtgcggc cgacttgtgc
      421 gccaaattca ggattcgcgc tcaacagctt gtctttgtgc gtatcgtaaa agcgcggttt
      481 gctgtggctt acgccgactt tggcagtcag gccgccggtg cggtaggacg cgcccaattc
      541 gtaaccgtgg tttttgatgt aaccggcatt gacggcttca cggacagcgg cagagacgtg
      601 gcggttttgc ggattggcaa gcgcgtcttt gatggtttgc cagaagtagc tgccgttggc
      661 ggcaaacgtg ccgtcgttgt agttgaagcc gatttcggta ttgcgcgcgc gttcggcttt
      721 cgtgccgtcg gcaatcgaga tgatgccgcg tttaccgtgg gtttgcagcg cgtcatacag
      781 gcgcgggctg cggctggcgt agttgtggct cgcgctgaag ctccagtgtt cgtgcggctg
      841 ccaaatcaca ccgaaactcg ggttaaggtt gctgcttgaa acggttttgc cgtcatgggt
      901 tttcaccttg aagcggtcgt aacgcagccc gccggtcagg gtaaagccgt caatctcgtg
      961 aatggcttcg atatacgcgc cggtatcggt tttggtcggg ttagacagtt tgtaggcgtg
     1021 aacaattttt tcattggcac gatttttttc tttttgtgca tcatctacgt cgacttcttt
     1081 tccgtcggct ccttttttct tatcggagat ctcaaatttc gagttcaaaa acgcttgcgg
     1141 tttgatttcc tgatggcggt agttgatacc gtatttcagc agggtttgtt cggcaaggcg
     1201 gctgtcgaag ttgaagttcg caccacgagt ggtgattcgg gtatggttgg ggccttttac
     1261 attgcctgcg tagccggtgc cgctgtcatc ggcggaatag cgttcttttt ccaacacata
     1321 ggcgttggca tccagttttt cgacaaagcc caggttttta cccgtgtacg ccaagttggt
     1381 gttggattgg gtagtttcgc ggtaagcagg ggcttggcgg tcaatattta tccgtgaact
     1441 tttgtcgccg acggtaaatt cttcacgcac agtgcggatg ccccggtgtt ggtctttcat
     1501 gtggctcaac acgatgcggt ggtcgtcgtc gccgaaagtt gttccgattt tggcgaggta
     1561 gctgcgtttg tccagcgcgc tgtacggtac ggttttgccg ccgttgacat tgcggaaacc
     1621 tttgccggct tcgtaatctt tttcatcgtt gcggttgtaa gagaacaaac cgtcgaagtt
     1681 gccctctttt ccgaatacgc tggcgccgta gcttacgcct tcgttgctgg caaagccgct
     1741 gttgaggcgc acgccccagt ttttatccaa gcctttgagc aggtcttggg catcgacggt
     1801 tttggcgata atcgcgccgt tggtcgcgcc gataccggca gaggcggaac ccgcgccttt
     1861 ttgtacggaa acgactttaa ccaaagcggg atcgacaata aatctgcctt ggtggtaaag
     1921 gatttggctg tcggaatagg cgttgtccac cttgatgtcg acagagttct gacccatacc
     1981 gcgcagcgtc aggaattggg acgtgccgtt gccgccgccg aaatcgatgg acggctcttc
     2041 ttttaagagt tcgcgcatat cggttgcggt gctttcgtct ttttgttgaa gcgtaacgat
     2101 gttggtacgg attttgctgc cttggcggtc gccttttacg gtaacggtat ccaatgcgac
     2161 attggcatta ttttctgccg catgggcaaa acctgccgcc agggtaagcg agagcaggct
     2221 gaggcggaaa aacggggcgt tcatttgttc gtccttttga gtgtatgaag ggaagtaaat
     2281 ccaaaccgtt aaggtttggc aggataagaa aaataattaa taattatttt tatttatatt
     2341 aacagggggg ggatttttgc aaagctgatt atcgttttta tttgcgaagt gttgtttttt
     2401 gttgacaagt tttgtcggaa atgtaaaaaa cggcggaaat atagtggatt aacaaatgcg
     2461 ggaatgacga aaagcaacct ttccgcgtcc ttcccgcgaa agcgggaatc tagaacccct
     2521 aacgcggcag gaatctatcg gaaaaaaccg aaaccgaacg aacctagatt cccgcctgcg
     2581 cgggaatgac gaggcctgcg cgggaatgac gaaaagcaac ctttccgcgt ccttcccgcg
     2641 aaagcgggaa tctagaaccc ctaacgggca ggaatctatc ggaaaaaacc gaaaccgaac
     2701 agactggatt cccgcctgcg cgggaatgac gaagcctgcg cgggaatgac gaaaagcaac
     2761 ctttccgcgt ccttcccgcg aaagcgggaa tctaggaact caaagctgca agaatttatc
     2821 agaaacaact ggaactcaaa aaaactagat tcccgcctgc gcgggaatga cgaagggtta
     2881 aagaaatgat gagaaacggc ggtaatttat cgggaataac cgaaaacgaa cggaaatcag
     2941 gacaaggcgg cgaagccgca gacagtacgg ataggacgga accgattcac ttggtgcttg
     3001 agcaccttag agaatcgttc tctttgagct aaggcgaggc aacgacgtac tggtttttgt
     3061 tcatccacta taacagcaac cctgtcgccg tcattcccgc gaaagcggga atccagtccg
     3121 ttcagtttcg gtcatttccg ataaattcct gctgcttttc atttctagat tcccactttt
     3181 gcgggaatga cggcggaagg gttttggttt tttccgataa attcttgagg cattgaaatt
     3241 ctagattccc gcctgcgcgg gaatgacggc ggagcggttt ctgttttttc cgataaattc
     3301 ctaaaactta aaatttcatc attcccgcaa ggacagaaaa ccaaaaacag aaacctaaaa
     3361 ttcgtcattc ccacgaaagt gggaatctag aatcccggac tttcagataa tctttgaata
     3421 ttgctgttgt tctaagg
//
LOCUS       DBBZYD010000132         3428 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.132, whole genome shotgun sequence.
ACCESSION   DBBZYD010000132 DBBZYD010000000
VERSION     DBBZYD010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.132"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..380)
                     /locus_tag="ACJJDL_001932"
     CDS             complement(<1..380)
                     /locus_tag="ACJJDL_001932"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574581.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMY"
     gene            complement(438..803)
                     /locus_tag="ACJJDL_001933"
     CDS             complement(438..803)
                     /locus_tag="ACJJDL_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574582.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(785..1330)
                     /locus_tag="ACJJDL_001934"
     CDS             complement(785..1330)
                     /locus_tag="ACJJDL_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574583.1"
                     /translation="MKKQITAAVMMLSMIAPAMANSMDNQIFENQVFHTRADAPMQLA
                     ELSQKEMKETERAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
     gene            complement(1493..1765)
                     /locus_tag="ACJJDL_001935"
     CDS             complement(1493..1765)
                     /locus_tag="ACJJDL_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574584.1"
                     /translation="MFAVIFFSTLGCILAWIRDIPKIKSKKILARSLYIIGIINVIIS
                     YVLIKNILVSVSDGGGIKYVAIYLSNLFFWTVLMYVLVKRLSKKPS"
     gene            complement(2641..2889)
                     /locus_tag="ACJJDL_001936"
     CDS             complement(2641..2889)
                     /locus_tag="ACJJDL_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574585.1"
                     /translation="MNIKNEIVALISKKIDGGQYSSLENFALSVLREKIIKNTVSSDE
                     KLLIINDFLSGFLEFDPETGKPVGETLKIEQMIDFFLV"
     gene            3196..>3428
                     /locus_tag="ACJJDL_001937"
     CDS             3196..>3428
                     /locus_tag="ACJJDL_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7574586.1"
                     /translation="MRKSRLSQYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHR
                     LRLLIYQNSPHLEMFDGEVEADESYFGGQRKGKR"
BASE COUNT         1115 a          729 c          512 g         1072 t
ORIGIN      
        1 ctatacatct caatacgata aatatttctt aagtcaaaat gcaagcctga ccgtacctta
       61 actgtcaaaa ttttattatt ttttattgat tttaaaacaa tttctgcaaa attctcttcg
      121 ctttctctct tttttagaag cacataagaa aaaataaaac ttccccgatt aaattcataa
      181 atatgtttca accatttgcc tcctctttct gtaagacaag attcagtttc attcttcctt
      241 attgtataaa tatttccttc acaaaatctg aaataaatcc ataaatccat cttatccata
      301 attaaagaaa aagtttcacc tcgagatttt gtcaacaatt cgcaaggttg cgatgttgca
      361 atcaaatagc cgaaagacat tttttacctc atacatggtc gaaatcagtt tctgttagtt
      421 cagaatccat tttttcgtca acaactgaat ccgcattttt gaattaacgt tttcatcagc
      481 tgccgtttat ctaaaccggc aggttcagtt tcaaaataag ccttatatga agactgtaag
      541 catttcagaa aaagatcatc agaagacata tctgccgaat caaatacaac tgttttgatt
      601 ttggtactta cccaaaaccc tttttgctct ttttctacta tacggaaatt cagaatattt
      661 ccaaccgaat caaaagcacg gtaaacatca tccatcaaat cctgcggctc tattttcttt
      721 tccaattccg acaatccttg aaatatatcc aaagacacat cttcaaatag aaaaaaagga
      781 ggagttagaa gcggtttttc catgatctgt ccgtagattt tgattcccaa gggcgatgac
      841 gaccaattcc ctgtccaggc aaagtcttgc ccgtattatc cgtaactcga cgatgataat
      901 ggggaaattt tccaatagga tgacctgttc tattaccgaa aggggctatc cgcatattat
      961 tgccgatttt aatctcacgt ccatatttag caaaggaaac aacctttcct gcggcgccta
     1021 caccaccagg aattgcgcct aatccgccag caatagcaac atctctaaca gaagctggtc
     1081 tgcctgtcgt tgcataacta aaaccatgct gtgtccacat accaatggca gcaccaccca
     1141 agatagccaa tggaagaaac gccctctcag tctccttcat ctccttttga gaaagttccg
     1201 ccaactgcat cggcgcatct gcccgcgtat ggaatacttg gttttcaaat atctgattgt
     1261 ccatgctgtt tgccattgcg ggggcaatca tagacagcat cattacggct gcggtaattt
     1321 gttttttcat aataactcct ttggattaca aggttggaaa atcaaagccc tgcttagaac
     1381 gtatgttgca cacccaattt caataggtaa atcagattgc aaatccagca atttgaatat
     1441 tgtcattgtt ccgtgcaaaa gggattttta ttgatgagtt gtgtactggg tttcagcttg
     1501 gctttttaga taatcttttc acaagaacat acatcaatac tgtccaaaaa aaaagatttg
     1561 ataaatatat tgcaacatat tttattccac ctccatccga aacagaaacc aatatatttt
     1621 taattaatac atagctgatt attacattta ttattcctat aatatataag gatcttgcca
     1681 aaattttttt tgattttatt ttaggaatat ctcttatcca tgctaaaata cagcccaatg
     1741 tcgaaaagaa aataacagca aacactacct tacctcctct cacttccaac caaaccgata
     1801 gcaggtttgg ttggaagttg gtttatttat tatttaacgg cgaatgtcag tgttcttacc
     1861 cgtagaacct gcataaccat ttatgccacc agcaacagtc cccactgcta cacctcgcat
     1921 accattaatc agaattcttc ctattttttc gaatccacta tttcttccaa agatgcagca
     1981 aacgcaggtt aagcctagac ccaatctacg tttgctgccg catctgatcc ctattgtttc
     2041 ttatccttac atcttcctgc cttgtcaatc aaataaagac agaagactat acaaaaactg
     2101 accgacatac tgaaaatacc tatccccttc catgcaatct ccgcaccatt gacccaatag
     2161 atcagactga gaaacaacaa agccacagta taaatcaacg taaaaaatat tgcgtaaagc
     2221 acaataaagg gaacttttat ctcacggttg ttttttataa tacattcagc aacttgattt
     2281 ccgaatatac ctgataaaaa atatagtatt agatcatcca tttcgtttat cttctatgtt
     2341 ttcccattgc ggcgctagaa gactgattta atgctgcacc atgcaatata gtgaattaac
     2401 aaaaaccagt acggcgttgc ttcgccttag ctcaaagaga acgattctct aaggtgttga
     2461 agcaccgagt gaatcggttc cgtactatct gtactgtctg cggcttcgtc gccttgtcct
     2521 gatttttgtt aatctactag agtttaaaca actttatttt tgattttatc ccaagtataa
     2581 acctgacaat cgtatttaaa agccggatat aagcctagct tgttcactgg tatgtatgat
     2641 ttagactaaa aagaaatcaa tcatttgctc aattttaagc gtctccccga caggtttccc
     2701 ggtctcagga tcaaactcaa gaaaacctga taaaaaatca ttaataatca ataatttttc
     2761 atcactggaa acagtatttt ttataatttt ttcccttagt acggataaag caaaattttc
     2821 taaagaacta tattgccccc catcaatttt tttagaaatt aaagcaacta tttcattttt
     2881 aatattcata aattaccctt aaatgataaa gggagcgaag cccgcttaaa acgtataact
     2941 gtatacccaa tttcagcaag cacaggttga gttgccaagc ctaacagagc ctgaatgatt
     3001 ggttataact caaccttata tctacactta ccgaaaacct caaataactt aataaaaatc
     3061 acacctaata cttactgaaa cgataaacta cattttcttt aaataaggtt ttatctgtta
     3121 tctcatttaa agacaataaa ctttggggct gtcctagata actagggaaa ttcaaattaa
     3181 gttagaatta tccctatgag aaaaagtcgt ctaagccagt ataaacaaaa taaactcatt
     3241 gagctatttg tcgcaggtgt aactgcaaga acggcagcag agttagtagg cgttaataaa
     3301 aataccgcag cctattattt tcatcgttta cgattactta tttatcaaaa cagcccacat
     3361 ttagaaatgt ttgatggcga agtagaagca gatgaaagtt attttggcgg acaacgcaaa
     3421 ggcaaacg
//
LOCUS       DBBZYD010000133         3387 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.133, whole genome shotgun sequence.
ACCESSION   DBBZYD010000133 DBBZYD010000000
VERSION     DBBZYD010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.133"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(97..735)
                     /locus_tag="ACJJDL_001938"
     CDS             complement(97..735)
                     /locus_tag="ACJJDL_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HGG7574587.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            990..1832
                     /locus_tag="ACJJDL_001939"
     CDS             990..1832
                     /locus_tag="ACJJDL_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HGG7574588.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            1898..2560
                     /gene="exbB"
                     /locus_tag="ACJJDL_001940"
     CDS             1898..2560
                     /gene="exbB"
                     /locus_tag="ACJJDL_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HGG7574589.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            2563..2997
                     /locus_tag="ACJJDL_001941"
     CDS             2563..2997
                     /locus_tag="ACJJDL_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HGG7574590.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
BASE COUNT          889 a          798 c          953 g          747 t
ORIGIN      
        1 taatgatgaa aaaaataaga ttacactaca ggaaaacgcg gcagggcaat atgtcctgcc
       61 gcgttttctg gagcgtttat gccgtctgaa agccagtcag acgaacatct gcacaaacgc
      121 aatcaccagc cgcacaatcg gtgcaataaa cgcacccaaa accccggtca gcatcagcag
      181 taggataatc cacgtcccat aaggttcgat tttgcggaac gcttgcgaat atttcgccga
      241 caggaaggtg tcgatgaaaa tgccgccgtc ccaaggcagg atggggatga tgttgagcgc
      301 gaacagaatc gcattgatca gaataccgta gtttgccatt tgagccaacg gcatctgata
      361 cgccccaccg acatacggag tcagcaccaa aaccacgccc cacagaacag ccatcgctag
      421 attcgacagc gggccggacg cggcaacgca acgccaggca aggcgcgggt tgcggaagtt
      481 gcgcgaatcg ataggaatcg gacgcgccca gccgaacagg aagggcgtga acatcaaagt
      541 aagcagcggt acgatgattg tgccgaccaa atcgatatgg ggcagggggt tcagtgtcag
      601 cctgccgtat tgttcggcag tgttgtctcc ccagtagcgc gccgtatagc cgcgcgccac
      661 ctccctgacg gtaatggcga gcagcacggg caggacggca agcagaaaca cgcccaaatc
      721 aaaattttga aacatggttt tcctttgaac agatgtggtg tgcagcccga aacggctgac
      781 agacagaagc ggcaatatat catctaacct gattttattg gaataagaaa tcagacggaa
      841 tcattttttc tgccggcccg ttatctgatg atttgctgta atacagcgtt taaacacggt
      901 ttgcctgtga acggaacaga cattcatatg accaaaaatt gtaaaaatag gttgcaaata
      961 ggaattgttg ctattattat gcccgaatta tggataaaga acgaatttta acccccgcag
     1021 tcgtgttttc cgtcgcactg ctgcatttgg caatggtggc attgctctgg caggcgcaca
     1081 agctgcccgt gatagagtca ggaaatgtta tcgaatttgt cgatttgggt gattttggcg
     1141 gaggggacgg tgcacccgaa ggcgcaggtg cgcctgctgc gcctgagccg caacctgagc
     1201 ctgagccgcc caaacctgtc gagccgccca agccggtttt gaagccggtg gttacgaaaa
     1261 aggcggatgc ggatattcag cagcctaagg aagagccgaa acctgaagaa aagccgaaac
     1321 ccgaagaaaa accgaaacca gagcctaagc cggaagcgaa gcctgtcccg aaaccggcgg
     1381 aaaaaccggt cgagaagccg tctgaaaaac ctgccgaaca tcccagcaat gcttctgcca
     1441 aagcagacag cgagcagggt aatggggaag ataagggaac cggtaccaaa ggagacggaa
     1501 cggggcgcgg agaaggcagc ggtaaaggta gcggcggtgt caaaggcgaa cacggggaag
     1561 gagccggcag cagcaaaggc aatcctttac gcgccaacgg cagcattccg cgcccggctt
     1621 atcccacgct ttctatggag aatgacgagc agggtacggt tgttttgagc gttttggttt
     1681 ctccgggcgg tcatgtcgag tccgttaaaa tcgtgaaaag cagtggtttt tctcggttgg
     1741 acaatgcggc acgcaaggcg gcgcaaaacg ggcattttca agccaatgcc tggacggagt
     1801 ttaaagtccc cgtcaagttt gaattgaatt aggcggttgc cgcagcggtt tgcggcagct
     1861 tggatgtttg attggttttt tcagtgttgg aatcattatg aatttgaaat tagtatttga
     1921 atcgggcgat cccgtcctga tcggtgtgtt tgtgttgatg ctgttgatga gtatcgtaac
     1981 gtggtgtttg gttgtcttgc gctgcatcaa gctgtatcgg gcgcgcaaag ggaatgccgc
     2041 cgtcaaacgg catatgcgcg atactttgtc gctgaacgac gcggtcgaaa aagtgcgcgc
     2101 cgtcgatgcg cctttgtcca aactggcgca agaggcattg cagtcttacc gcaactaccg
     2161 ccgaaacgaa gcgtccgaac tggcgcaggc tttgccgttg aacgagtatt tggtcattca
     2221 aatccgcaac agtatggcgc agattatgcg ccggtttgat tacgggatga ccgcgcttgc
     2281 ctccatcggc gcgaccgcgc cgtttatcgg gctgttcggc acggtttggg ggatttacca
     2341 cgccctgatc aatatcgggc aaagcgggca gatgagtatt gcggcggttg ccggcccgat
     2401 tggcgaggca ctggtggcga cggcggcggg tttgttcgtg gcgattccgg cggtgttggc
     2461 atacaacttc ctcaatcgcg gcacaaaaat actgacccag gatttggatg cgatggcgca
     2521 cgatttgcac gtccgcctgc ttaatcaaaa ggatagctga ttatggcatt tggttcgatg
     2581 aattccggcg acgattctcc gatgtccgac atcaacgtta cgccgttggt ggacgtgatg
     2641 ctggtgttgc tgattgtgtt tatgattact atgccggtgc tgacgcattc catccctttg
     2701 gaactgccga ccgcgtccga gcagacaaac aagcaggaca aacagcctaa agaccccctg
     2761 cgcctgacga ttgatgcgaa cggcggctat tatgtcggcg gggattctgc aagcaaagtg
     2821 gaaatcgggg aagtggaaag ccgtctgaaa gccgccaagg agcagaatga aaacgtgatt
     2881 gtggcgattg cggcagacaa ggcggtggaa tacgattatg taaacaaagc tttagaagcc
     2941 gcccgtcagg caggaatcac caaaatcggt tttgtaaccg aaaccaaggc gcaataaagt
     3001 tcgacgcttg aacgaatgcc gtctgaaagt ctttcagacg gcatttctta tgtttaatca
     3061 gctatatata gttgattaaa acaaaaatga gacgacagag caccgtctcc atttctgcgc
     3121 aggcgggaat acaaacatct gatttttctt ttattttcaa acattactga aatgggtaag
     3181 tctggagtcc tgcctgcgcg agaataatga aaatgtgcat ttctaatttt tatagtggat
     3241 taacaaaaat caggacaagg caacgaagcc gtagacagta caaatagtac ggaaccgatt
     3301 cacttggtgc ttcagcacct tagagaatcg ttctctttga gttaaggcga ggcaacgccg
     3361 tactggtttt tgttaatccg ctatacc
//
LOCUS       DBBZYD010000134         3323 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.134, whole genome shotgun sequence.
ACCESSION   DBBZYD010000134 DBBZYD010000000
VERSION     DBBZYD010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.134"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(1..593)
                     /locus_tag="ACJJDL_001942"
                     /pseudo
     CDS             complement(1..593)
                     /locus_tag="ACJJDL_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
     gene            complement(602..1396)
                     /locus_tag="ACJJDL_001943"
     CDS             complement(602..1396)
                     /locus_tag="ACJJDL_001943"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HGG7574591.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIYELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV"
     gene            1780..3114
                     /gene="gdhA"
                     /locus_tag="ACJJDL_001944"
     CDS             1780..3114
                     /gene="gdhA"
                     /locus_tag="ACJJDL_001944"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HGG7574592.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
BASE COUNT          880 a          923 c          794 g          726 t
ORIGIN      
        1 cttgcgcgat gccgttcaag gacaaaccca tacccttttc ggcaaaacgg atttcacggt
       61 cgtcaaacga gactttgccg aagccgaccc gtttcagggc ttccttcacg ctgttttgag
      121 gaggcggcgt ttccgcatcg ggacgggcgg caaaataatc ggcatacagt ttccacaacg
      181 cctgcactgt cggatcgaac gcgccgtccg tcagcgcgtg aatatcgcgg cacaggctca
      241 acagttccaa aaaatccgcc gacggcgaag tcagataacc gtccctgttc aggcggctga
      301 tcaggctgtc ttcacggtaa aggctgaaca attttttcca aacgcgccac ttccgccaaa
      361 accttgttga ccaaatccgc cgcctgtctg tcgtccacac cgaacaggcg cagctccgca
      421 ccggaaccca gcgcgacacc tttccagaag aacacatttt cattgcgttt ttcatcttta
      481 ttgcgttttt catcatcggc ggcaaaagga ttcggcagga aagaaaccgc cgcgcccgcc
      541 gccgcaacgg cggcaactgt caaaaaacgc ctgcgcccga aatgcctgcc cataccgcct
      601 cctaaaccga cactgccgcc ttgatgtgcg gatgggggtc gtaaccttcc aactcgaaat
      661 cttcaaactt gaaggaaaac aaatctttga cttcaggatt gattttcatc actggcaagg
      721 cgcgcggttc gcgttccaac tgcaatgcgg cctgctcgaa atggttgcgg tacaaatgcg
      781 cgtcgccaaa cgtatggaca aactcgcccg cctccaatcc gcacacttgc gccatcatca
      841 tggtcaacaa tgcgtagctg gcaatattaa acggcacacc aaggaaaata tctgcactac
      901 gctggtaaag ctggcaggac agtttgccgt cggcaacgta aaactgaaac agcgcgtggc
      961 agggcggcaa ggccatttcg tcgaccaaag ccggattcca cgccgataca atcaggcggc
     1021 gcgagtcggg gtttttctta atttgttcca ccacattggc gatttggtcg atatgcctgc
     1081 cgtcgggcgc gggccagtta cgccactggt agccgtaaac cgggcctaag tcgccgtttt
     1141 cgtccgccca ctcgtcccaa atggaaacat tgttgtcctt taggtatttg atattggtat
     1201 cgcctttgag aaaccaaagc agctcgtaga taatcgaacg cagatgcagc tttttggtcg
     1261 tcagcagcgg aaaacctttg cccaagtcaa aacgcatctg ataaccgaat acggagcgcg
     1321 tgcccgtacc ggtgcggtct gatttgtccg taccgttgtc gaggacgtgg cgcatcaagt
     1381 ccaaataggc tttcatagca gtctttcatc aaattaaacg gcgcatattg taacatttcc
     1441 ggataatgcc caaaacacgg atacagacag gcaggattgt tggcaatttc agtccttttc
     1501 cacagtaaaa cccggtggga aaacaaaatt accttgattg gaatcaaaaa atctagttta
     1561 attacttaga ataaaatttc aataatattt ttatttacga aattaattta tgattattga
     1621 ttaattatcg gcaacaaaca tcaaacatcg aaaacatgga aaaaataatg tcaacaattt
     1681 ttgccaaatc gggcttggca tcagaaaaaa ataggtttat attcccacct acaaatttgt
     1741 tttcccatta gtacactatc aaccaaaagg agtatccgaa tgactgacct gaacaccctg
     1801 tttgccaacc tcaaacaacg caatcccaat caggagccgt tccatcaggc ggttgaagaa
     1861 gtcttcatga gtctcgatcc gtttttggca aaaaatccga aatacaccca gcaaagcctg
     1921 ctggaacgca tcgtcgaacc cgaacgcgtc gtcatgttcc gcgtaacctg gcaggacgat
     1981 aaagggcaag tccaagtcaa ccggggctac cgcgtgcaaa tgagttccgc catcggtcct
     2041 tacaaaggcg gcctgcgctt ccatccgacc gtcgatttgg gcgtattgaa attcctcgct
     2101 tttgaacaag tgttcaaaaa cgccttgacc accctgccta tgggcggcgg caaaggcggt
     2161 tccgacttcg accccaaagg caaatccgat gccgaagtaa tgcgcttctg ccaagccttt
     2221 atgaccgaac tctaccgcca catcggcgcg gacaccgacg ttccggccgg cgacatcggc
     2281 gtaggcggac gcgaaatcgg ctatctgttc ggacaataca aaaaaatccg caacgagttt
     2341 tcttccgtcc tgaccggcaa aggtttggaa tggggcggca gcctcatccg tcccgaagcg
     2401 accggctacg gctgcgtcta tttcgcccaa gcgatgctgc aaacccgcaa cgatagtttt
     2461 gaaggcaaac gcgtcctgat ttccggttcc ggcaacgtgg cgcaatacgc cgccgaaaaa
     2521 gccatccaac tgggcgcgaa agtgctgacc gtttccgact ccaacggctt cgtcctcttc
     2581 cccgacagcg gtatgaccga agcgcaactc gccgccttga tcgaattgaa agaagtccgc
     2641 cgcgaacgcg ttgccaccta cgccaaagag caaggtctgc aatactttga aaaccaaaaa
     2701 ccgtggggcg tcgccgccga aatcgccctg ccctgcgcga cccagaacga attggacgaa
     2761 gaagccgcca aaaccctgtt ggcaaacggc tgctacgtcg ttgccgaagg tgcgaatatg
     2821 ccgtcgactt tgggcgcggt cgagcaattt atcaaagccg gcatcctcta cgccccggga
     2881 aaagcctcca atgccggcgg cgtagcaact tcaggtttgg aaatgagcca aaacgccatc
     2941 cgcctgtctt ggactcgtga agaagtcgac caacgcctgt tcggcatcat gcaaagcatc
     3001 cacgaatcct gtctgaaata cggcaaagtc ggcgacacag taaactacgt caatggtgcg
     3061 aacattgccg gtttcgtcaa agttgccgat gcgatgctgg cgcaaggctt ctaagcaaac
     3121 gccgccgctc cgcaaacaaa atgccgtccg aaccgcaaat gctgttcaga cggcatttca
     3181 ttatccgccc gttcgaatcg ggtgatacta tttgtatcca gaattgttgg atagtttggg
     3241 agtggagagg aagaaatgat tatggaccaa tactatatgg agttaaagaa taagttatct
     3301 aacagaccaa tcctactgga taa
//
LOCUS       DBBZYD010000135         3322 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.135, whole genome shotgun sequence.
ACCESSION   DBBZYD010000135 DBBZYD010000000
VERSION     DBBZYD010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.135"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(180..413)
                     /locus_tag="ACJJDL_001945"
     CDS             complement(180..413)
                     /locus_tag="ACJJDL_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574593.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPRRRESRPFGFGFFG"
     gene            complement(443..3211)
                     /gene="tdfH"
                     /locus_tag="ACJJDL_001946"
     CDS             complement(443..3211)
                     /gene="tdfH"
                     /locus_tag="ACJJDL_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HGG7574594.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQQYFVQTGGLKFNSDSGKWER
                     DLQRQFWKTKWYKQYEDPQELQKYIEGQDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYKKHCNRSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEEVTCNDDKTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
BASE COUNT          762 a          803 c          825 g          932 t
ORIGIN      
        1 gggaatccag ttttttgagt ttcagtcatt tccgataaat tgccttagcg ttgaatgtct
       61 agattcccgc ctgcgcggga atgacggatt ttaggttggg gtcatttatt ggaaaaagca
      121 gaaaccgctc cgccgtcatt cccacgaaag tgggaatcta gaaatttaat gttgcggcac
      181 taaccaaaaa aaccgaaacc gaacggtcta gattcccgcc tgcgcgggaa tgacgactca
      241 taaattaccc gaaacaacca aaaataaccg aaatcaaaaa ccggcttccc tgcgtgggaa
      301 tgaaatggat ttttctttga gttgccgatg cgataaaacg gattggcata ggcttgcggc
      361 aggatgatgc gtttggggaa acaaatgccg tctgaagggc tttcagacgg cattgcggtt
      421 ttctacaaaa cgcgggctgc ctttaaaact tgtagctcat cgtcatcaaa aaggtgcgtc
      481 cgcgtgcaaa attggtcaat acgcttttgc ttgtgccgcc gtatttgccg ttgcacaacg
      541 ttttatcatc attacacgtt acttcttcgt ccttgtcttt cgggtcgaac gagctgtaat
      601 aacgctgcgt tgccgcatca ttgcccgcat cgagcggatc gatataacgc ctgtcgaaca
      661 gatttttgac ttcggcgcgg aaaataaggt ttttcttcgg ctcgtaagcg gcgtaaaaat
      721 caaaaatcaa aggctggcgg gcaagggttt cggtttgttt gatggaacgc ttgcccagtt
      781 gccggacatt gctggtattt cccccgttgg tgccgtcgat atagcgttct tcagccgtcg
      841 cgcggatgct cttgccgaaa tagcgcatcg cgccgcccaa agtcagtttg ttgcccaacc
      901 agcgcgtacc gacttccaaa cgtccgtaat ctcgcggcag ggcggaaacc ctgctcaacc
      961 cataaccttg tttgagttgg tcttctttgg acgcattgtt gggcgattcg ctcgcatcgc
     1021 tgaagttggt cggttgcgtg cttttttgat aggcgtaaga aaggttggtg aaaaaacgcc
     1081 cataatcgta attcagctcc aactcaaaac cgtgtttgtg cactttgtct ttgaaattgc
     1141 gatgttggat ggtgtaggca agcccggtgc tgctgaccca gctcggaata tccccgttca
     1201 aatcccacca tttcccgtaa acgttgtgga tgtagttgtc gatgcggctg cggtagccga
     1261 ccagttttaa tcctaatgta tcatcttgtt ttaacagtcc ttttttatag gtattgaagc
     1321 caaattgcca agtgtttgcg cgctctggtt ttaaggcggt gtgaacgccg gagtcgccga
     1381 tttgggaaaa atacatttct tggatgttgg gcatacggtg tgtgcgcgaa tagctggcga
     1441 acggcatgaa ataatcgccg aagtccgcac taatgctgac cgaatggttg ttggcgcgct
     1501 ttttgccgta ttttttcaat acgggttcat aaatcccgca gctccggttg caatgtttct
     1561 tgtatgtcgg cgagttttct ccgaatgccc gcttaaattc gtcatccgag ccgtaatagc
     1621 ccgtatattc gccgccgaaa cggtagccga cggtattggt gctgtagttt aagcggtaaa
     1681 tgtctttttt gagcgcggca tcgaagtaga acgtgttgaa atattggctg ccggccggtt
     1741 ggacgatggt tgatttttgg ggcagcagcc ctttatcgcc cttaaaccgc cccaaatagg
     1801 aataaagccc gttgtcctga tccggaccgt cgaaaaacag ccccaattct tcaggaaagc
     1861 ggtttttgcc gtattcgttg tggaaataat tgaagcccaa agtggtttgc aactcggttt
     1921 cgcggggcag ccggaaggtg gcggtgttgt tgaggtcgag gattttcgcg ttgttgtagg
     1981 tttcaaaatc ttttaaaagc ccccagcctg taaacttcga ccctttcgga tatttctgcc
     2041 tgcccgaatt gtaggctgcg gtcagattga ggttggcata tgagtttaaa gataaaccgt
     2101 aattgaattg ataattgcgg ttgatgattt tgcggctgcc gattttggtg tttaaatcgc
     2161 gaaattgcgc cgtgtattta ttgaatacgc cgtcgtattc caatttaaac agattgcctg
     2221 ccgactgctg cttcaggctg gacggatcga tgggggtaat gtcgtattgc ggcgccaggt
     2281 tttcccgcca gcttttatct tgaccttcga tgtatttttg cagttcttgg gggtcttcgt
     2341 attgtttata ccacttggtt ttccagaatt gcctttgcaa atcgcgttcc cactttccgc
     2401 tgtcggaatt gaatttcaac ccgcctgttt gtacaaaata ttgctgcttg cgccgttcta
     2461 gatattccgc gccaaaattt ccgatgtgct gcccgccgcc gcccacgcgg taattttgcg
     2521 ccacgctgcg cctgctgtgc ccgtaaagca caccgacaga tgctccgctt tccagccatt
     2581 tgcgcgcacc tatcgccgcc atcgcattac ctttggttga attggtgccg gtcagacctt
     2641 ttagcagcag gccgtaggta ttattgccct gaacgacgtc atccacgcct aaagtccgca
     2701 gattcgccga accggcaagg ctgttgatgc ctgccgagcc gctgaagctg cctttgacga
     2761 catccagtcc ggcaataaaa ttgctgtcga cagatgcacc gaattgagat gaaccgcctg
     2821 ccctgcccgc atcggtagaa gtcgaataaa aggtctgcgt gatgccgtcc accatcgtat
     2881 tgacccgccc gaacccgctg tcgccgcgaa tattcaaaga cacaatgccc gagcttttat
     2941 cttgctgtgt aaacgcaccg ggtatgctgc gtacgatgtt gtcgaggttt tcgctggatt
     3001 tgaatatatc ctgacgggtc gatacggcac gcgcatcggt aaacactttt ttgtctttcg
     3061 gtacgcgctt cgccttgacg tgcacatctt ccaaaacctg tatctgcgcc tcgctgcccg
     3121 cgcgccctgc atcttcggca taactatgat gatatagcat aacacccata aggtaaaaac
     3181 aaatcggctt caaccggaaa gaagatctca tattttcctc aacaataaac agtcagacaa
     3241 ttaggaaata tactagcatt tttttcaggc ggcataaaca ttaaaaaagt gtaaatttga
     3301 tataccgtct gaagatttca at
//
LOCUS       DBBZYD010000136         3274 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.136, whole genome shotgun sequence.
ACCESSION   DBBZYD010000136 DBBZYD010000000
VERSION     DBBZYD010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.136"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(483..959)
                     /gene="greA"
                     /locus_tag="ACJJDL_001947"
     CDS             complement(483..959)
                     /gene="greA"
                     /locus_tag="ACJJDL_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HGG7574595.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            1351..2652
                     /gene="aroA"
                     /locus_tag="ACJJDL_001948"
     CDS             1351..2652
                     /gene="aroA"
                     /locus_tag="ACJJDL_001948"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HGG7574596.1"
                     /translation="MTESLRLPAASLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYRLHGVARMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGERQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVIN
                     EGYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIATTPVRVTGIGANSIQGDVA
                     FACELEKIGADVVWGENFVEVSRPKERAVQAFDLDANHIPDAAMTLAVVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVAEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLVSLLDVPVVINDPKCTHKTFPTYFEVFSSLTETAE"
     gene            complement(2695..3228)
                     /locus_tag="ACJJDL_001949"
     CDS             complement(2695..3228)
                     /locus_tag="ACJJDL_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HGG7574597.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          700 a          873 c          877 g          824 t
ORIGIN      
        1 caggcgggaa tttggaattt caatgcctca agaatttatc ggaaaaaaca gaaaccgttc
       61 tgccgtcatt cccgcgcagg cgggaatcta gaacgtggaa tctaagaaac cgttttatcc
      121 gataagtttc cgtgcggaca agtttggatt cccgcttttg cgggaatgac gggattttag
      181 gtttctgatt ttggttttct gtttttgagg aatgacggga tgcaggtttt cttaaccctg
      241 cgtcctagat tcccgctttt gcgggaatga cggcgacagg gttgctgtta tagtggatta
      301 acaaaaacca gtacggcgtt gcctcgcctt agctcaaaga gaacgattct ctaaggtgct
      361 gaagcaccaa gtgaatcggt ttcgtactat ctgtactgtc tgcggcttcg tcgccttgtc
      421 ctgattttta ttaatccact ataatttcct gcgtgtgtcg ggtgtatcga aatcaagccg
      481 aatcaaatat atcggacttc gataatgtcg tattcgcgca cgccgcccgg ggcttggact
      541 tccgccgtat cgccctcttc cttgccgatt aaggcgcggg caatcggtga gccgacatag
      601 attttgccct gtttgatatc cgcttcgtct tcgccgacaa tttggtaggt aacgtgttct
      661 tccgtttcca aatcttccag cgtaaccgtc gtaccgaaca cgattttgcc ttcggcgtgg
      721 atttcggtcg gattgatgat gtgggcaacg gaaagtttgt gttccagctc ggaaatgcgg
      781 ccttcgataa agccttggcg ttctttggcg gcttcatatt cggcgttttc ggacaaatcg
      841 ccgtgcgatc tggcttcagc aatcgcttcg atcacttcgg ggcgcgccac gcttttaagc
      901 tgctgcaatt cctgtttcag caattccgca ccgcgtacgg tcagggggat tttttgcatc
      961 ggtctttttt ctccatattc cggcacaccg gtttgcggca gcaaacatac cgcataccgt
     1021 cttgttttgt gcgtccggat attaaaataa aaacacaagc cgcccggaaa atcggcggct
     1081 tgtctgtcgt tgaacagcgg ctattctacc aaattctatg aaattggcaa tcgtgccgtg
     1141 ccgtccgcaa acacgctatg tccgcaacaa aagccgaaaa tatgccggca aaaaaatttt
     1201 agaaacaaaa aatttaaaaa taatcaattt tcggcacaaa aaaccatatt cacggacttt
     1261 aaaaccgaaa atgccaaacc tgagattttt cagacggcat ttgcaccagt ataatgcagg
     1321 ctgtttttat ctttatattt acgttttgcc atgaccgaat ccctccgcct ccctgccgcc
     1381 tcgctcaaac cttccactgt cgccctgccc ggctccaaaa gcatcagcaa ccgcaccctg
     1441 ctgcttgccg ccttgtccga caatgcttgc gaaatccatt ccctgctcaa atccgacgat
     1501 accgaccgta tgctcgaagc actcgataaa ctcggcgttg aaatcgaata tcttgccgaa
     1561 gaccgtctga aagtgcacgg cacaggcgga cgcttcccca accgcactgc cgatttgttt
     1621 ttgggcaacg cgggcacggc gttccgcccg ctgaccgccg cgcttgccgt tttgggcggc
     1681 gattatcgcc tgcacggcgt tgcgcgtatg cacgaacgcc ccatcggcga tttggccgat
     1741 gcactgcgga ttgccggcgc cgatgtcgaa tatctcggca aggaacacta tccgccgctt
     1801 catatcggcg aacgccaaga caacggcgag cgcgtgattc cgattaaagg caatgtatcc
     1861 agccagtttc tgaccgccct tttaatggcg ttgccgctga ccgggcaggc gtttgaaatc
     1921 cgtatggtcg gcgagttaat ttccaagccc tatatcgaca ttactttaaa actgatggcg
     1981 caattcggcg tacaggttat caatgaaggc taccgcgtct tcaaaattcc cgccgatgcg
     2041 cactatcacg cgcccgaaca cttgcacgtc gaaggcgatg cctccagcgc gtcctacttc
     2101 ctcgcagccg gtttgattgc caccacgccc gtccgcgtta ccggtatcgg cgcaaacagc
     2161 atacagggcg atgtcgcctt tgcctgcgag ctggaaaaaa tcggtgcgga cgtggtttgg
     2221 ggcgaaaact tcgtcgaagt ctcgcgcccg aaagaacgtg ccgtccaagc ctttgatttg
     2281 gatgcaaacc atatccccga tgccgccatg accctcgccg tcgtcgcgct tgctacaggg
     2341 caaacctgca cgcttcgcaa catcggttcg tggcgcgtca aagagaccga ccgcattgcc
     2401 gcaatggcga acgagttgcg caaactcggt gcaaaagtcg ccgaagaagc cgaagcaatt
     2461 cacatcaccc cgcccgaaac gccgacaccc gacgccgtca tcgacactta cgacgaccac
     2521 cgcatggcaa tgtgtttctc gctggtttcg ctgttggacg tacccgtcgt catcaacgat
     2581 ccgaaatgca cccacaaaac cttcccgact tattttgaag tgttctcatc gctgaccgaa
     2641 acagcggaat aaggcggcat tttgccgtga ttccggcgca gcgcggcggg cggctcattc
     2701 tgtaaaaaaa gtatgtgcgc cgaggtagtt tttggcgtaa aacggtgtgg agagtttttc
     2761 ggttttgatg gttttgccgc tgctgggggc atggatgaat tcgccgttgc cgatatagag
     2821 tccgacgtgt gagtagcggt gtgtgccgcc ggtgttgaag aatacgaggt cgccggcctt
     2881 aaggcggctg tcggggattt tgcggcttgc cgccgccatg tcgcgggcgg tgcgcggcag
     2941 cttgacgttg agggcgtttt tgtaaacgaa ttgaatcatg ccgctgcaat cgaagccggt
     3001 tgcggtgctg ctgccgcccc atttgtaggg cgtgccgatg agtccgaggc tgtggagcat
     3061 gagttcctgc gagccttgtg tgcggtcgat gtggctgatg cggacggctt ggatttgccg
     3121 gactgtctgt ttgggtttcg gttggcggtg tttgccggag gtcgtgccgc atgaggcgag
     3181 gagcagtgcg ctgagacaga ggaaaagggt tttgtcgggg ggaaacatgg tttttccttt
     3241 gcgggttcgg atatccgtct gaaggcgttt caga
//
LOCUS       DBBZYD010000137         3118 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.137, whole genome shotgun sequence.
ACCESSION   DBBZYD010000137 DBBZYD010000000
VERSION     DBBZYD010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.137"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(125..976)
                     /locus_tag="ACJJDL_001950"
     CDS             complement(125..976)
                     /locus_tag="ACJJDL_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HGG7574598.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1324..2838
                     /gene="katA"
                     /locus_tag="ACJJDL_001951"
     CDS             1324..2838
                     /gene="katA"
                     /locus_tag="ACJJDL_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HGG7574599.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            2914..>3118
                     /locus_tag="ACJJDL_001952"
     CDS             2914..>3118
                     /locus_tag="ACJJDL_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574600.1"
                     /translation="MPSETSFDRFRRHFPIPPPPFQWAFFIKRKISRHSRPTAHFSAV
                     IPAPSPPVQTGTKTFPRHSRESGN"
BASE COUNT          746 a          882 c          810 g          680 t
ORIGIN      
        1 gtttctagat tccctctttc gcgggaatga cgggatgcag gtttccgcgc ggacggattc
       61 ggcattcccg ctttcgcaga aatgccggct tttggtttgt tgtctttata agattattcg
      121 gcaattattc tgcggttttg cgtttgtgtg ctgccggaat ctcaaaggat tctctgtatt
      181 tggcaatggt gcggcgagaa acctccatgc cgcggaaagc cagcaggttg gcgagcgcct
      241 cgtcagaata cggcgtgggt gtggacgagg caaaaccggc ggcgggaaag ggattgagcg
      301 aagcaatgag gtcgagtgcg gcttcgagtg tgccgctgtc ggtttggggc aggcgttttt
      361 ttattcgcgc gagggtttgg ctgcggttgc cgtcaatgct gtcgagggcg tttcggacga
      421 tatgcagggc ggagggtttg gcagcacatt cgcccgatct ttctatctgc agtatcagcg
      481 attcgttcaa atcggcggcg gccacgcctg ccgggtcgaa ttttttcaat gcggtcaggg
      541 cttgtttcag cattgcttca tccaacatcc actccaaggg cgtatggtcg aggatgtctt
      601 cgatgctgtc ggtcagataa ccttgctcgt caaggaaatc gatgaggatg tggacacagg
      661 cggattcttg gtcggaaagc gggtgttcgc atacttgcgc gtgcaggtat tgcttgaaat
      721 cctgctcgcc ggcgatgttg gacagcatat cttcgccttc gtctccgccg atttgacggg
      781 caggcgcagt gtaatggctg aactcggcat cggaaaattc atccgtgtct ttgcgttcga
      841 gcagggggtt gtccgacagc cagttttcga cctcgcgttc aagttcgata cccgacatct
      901 gcaatacgcg caaagattgt tgcagccgct ggttgagctg ctgggtctgt ttgagcttta
      961 ttccgagtaa ggtcatgata atgtggggaa aattgttatt ttcagcctgt cggcgcaaaa
     1021 aatgccgcaa agcgtcattg cattataaat ggttttaatg agcgggttcg gattccgttc
     1081 gataacaaaa aacaaacgaa aatcaagaac cgattgctta taataatatt aaatcgattt
     1141 catagtttta atagcgaaaa tcttggcgta tagtcgcatc catagttttt acaaaaggga
     1201 aataaaatgt cgattcaaga aatttattgc aatcaagaaa ccggttacga atacgctttc
     1261 cgccaaatcg tactgtaagc cgtttacccc catttgacca acctgagaaa aggaacaaga
     1321 gcgatgacta cctccaaatg ccctgtaacc catctgacca tgaacaacgg cgcgcctgtt
     1381 gccgacaatc aaaacagcct gaccgccggt cctcgcggcc ctctgctggc gcaggatttg
     1441 tggctgaatg aaaaactcgc cgacttcgtg cgcgaagtca tccccgaacg ccgtatgcac
     1501 gccaaaggtt cgggcgcgtt cggtacgttt accgtaacgc acgacatcac caaatacacc
     1561 cgcgccaaaa tcttcagcga agtcggcaaa aaaaccgaga tgttcgcccg tttcaccacc
     1621 gtggcaggcg aacgcggcgc agccgatgca gaacgcgaca tccgcggttt tgcgttgaag
     1681 ttctataccg aagaaggcaa ctgggatgtg gtcggcaaca acacgcccgt gttcttcctg
     1741 cgcgacccgc gtaagttccc cgacctgaac aaagccgtca aacgcgaccc gcgcaccaat
     1801 atgcgctctg ccacaaacaa ctgggacttc tggacgctgc tgcccgaagc actgcaccaa
     1861 gttaccatcg tgatgagcga ccgcggcatc cccgccggct accgccatat gcacggcttc
     1921 ggttcgcata cctacagctt ctggaacgaa gcaggcgagc gtttttgggt gaaattccat
     1981 ttccgcaccc aacaaggcat taaaaacctg accaacgaag aagccgccaa aatcatcgcc
     2041 gacgaccgcg aaagccatca gcgcgactta tacgaagcca tcgaacgcgg cgagtttccg
     2101 aaatggacga tgtacatcca agtcatgcct gaagcagacg cggaaaaagt accttatcat
     2161 ccgtttgact tgaccaaagt ttggccgaaa aaagactatc cgctgattga agtgggcgaa
     2221 ttcgagttga accgcaatcc cgaaaacttc ttcgccgatg tggaacaatc cgccttcgca
     2281 ccgagcaacc tcgttcccgg tatcggcgcg agcccagata aaatgttgca agcccgtttg
     2341 ttcaattacg ccgacgcgca acgctaccgc ttgggcgtga acttccgcca aatccctgtc
     2401 aaccgtccgc gttgccctgt tcacagcaac cagcgcgacg gacaaggacg cgccgacggc
     2461 aactacggca gcctgccgca ctacgaaccc aatagcttcg gccaatggca gcaacaaccc
     2521 gacttcgccg aaccgccttt gaaaatcaac ggcgacgcgg cgcactggga ctaccgccaa
     2581 gacgatgacg actatttcag ccaaccgcgc gccctgttca acctgatgaa cgacgcgcag
     2641 aaacaggcat tgttcggcaa caccgccgcc gcaatgggcg acgcgcccga cttcatcaaa
     2701 taccgccata tccgcaactg ctaccgttgc gatccggcat acggcgaagg cgtggcaaaa
     2761 gccctcggac tgactgtcga agacgcacaa gccgcccgcg cgaccgaccc cgcactcggc
     2821 cagcccggtt tgctgtaagg gggcattatg tggatggaaa ttgaagaaat cctgtcccgc
     2881 gccgtccgct accggaaata accgggcata aaaatgccgt ctgaaacgtc gtttgaccgc
     2941 ttcagacggc atttccccat cccgcccccg ccgtttcagt gggcgttttt tattaaacgc
     3001 aaaatatccc gtcattcccg ccccacagcc cacttttccg ccgtcattcc cgcaccatcc
     3061 ccaccggttc aaaccggcac gaaaactttt ccgcgtcatt cccgcgaaag cgggaatc
//
LOCUS       DBBZYD010000138         2995 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.138, whole genome shotgun sequence.
ACCESSION   DBBZYD010000138 DBBZYD010000000
VERSION     DBBZYD010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.138"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            82..243
                     /locus_tag="ACJJDL_001953"
     CDS             82..243
                     /locus_tag="ACJJDL_001953"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574601.1"
                     /translation="MRWLNLKNSTSVHNTQGIRTKEAVEQGLRGNNRPEKGIGNRWNY
                     DGFIKELAK"
     gene            293..577
                     /locus_tag="ACJJDL_001954"
     CDS             293..577
                     /locus_tag="ACJJDL_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574602.1"
                     /translation="MKVITITLFTSCILSGCYGLEYGMSGGIPHDDWAIGSHVSQAKA
                     DAAWKECSDKYMRNGGSGLVEQCMNDKGLIRLSEIRRRQKRAETQRAVIK"
     gene            complement(702..1418)
                     /gene="trmB"
                     /locus_tag="ACJJDL_001955"
     CDS             complement(702..1418)
                     /gene="trmB"
                     /locus_tag="ACJJDL_001955"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HGG7574603.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDANFGSNRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1540..2943)
                     /locus_tag="ACJJDL_001956"
     CDS             complement(1540..2943)
                     /locus_tag="ACJJDL_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7574604.1"
                     /translation="MNNPDLPYRQALERLSQKQYNFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGAPPETLISLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDKAVYRFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHP
                     EGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLTAYQKLISDSALNHPDQYGGIK
                     DSAIRRQRAEQLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDKEKACRYLQEAINNGY
                     GQKSVLQELLQQWQNAV"
BASE COUNT          627 a          622 c          902 g          844 t
ORIGIN      
        1 atacgattaa agtaatgtcg gattcaagaa tccgacctac ggaaaactaa agattttata
       61 cgggctacgg cttgctggct tatgcgttgg cttaatttga aaaacagcac atcggttcat
      121 aatacacaag gtattagaac aaaagaagca gttgaacagg gattgcgtgg taataataga
      181 cctgaaaaag gaataggtaa tagatggaat tatgatggat ttataaagga attagcgaag
      241 taacaggtat tccaaatatt tctgataaat ataaagaaca aggagtaaaa aaatgaaagt
      301 aatcactatt acattgttta ctagctgcat actatctgga tgctatgggc ttgaatatgg
      361 aatgagtggc ggcattcctc atgatgactg ggcaataggt agccatgtta gtcaagccaa
      421 agcagatgct gcgtggaaag aatgttctga caaatatatg agaaatggtg gttcaggatt
      481 agtagaacaa tgtatgaatg ataaaggatt aatacgttta tctgaaatac gtcgtaggca
      541 aaagagagca gaaacacaaa gagcagtaat taagtaacaa taatgaaata ctactgttcc
      601 cgaacaaagc ggcatttacg caggtgatga cggctatatt ttgaaaaatg ccgtctgtaa
      661 gcaaacgtgc ttcagacggc atttttttat ccggcggtct gttatccgat ccgtttgaat
      721 accaagtccc aaacgccgtg tccgaggcgt ttgccgcgcg cttcgaattt ggtttcgggg
      781 cggtagtccg gggtgggggc gtagtctgcc gccgtatttt gcaggctgtc gaagctgctg
      841 aggacttcaa gcatctgctg tgcatattct tcccagtctg tcgccaggtg gatatagccg
      901 ccggttttga gtttgggcag cagtttggcg atgaaggggg cttgtatcag acggcgtttg
      961 tggtggcgtt ttttgtgcca cgggtcgggg aagaatatgt ggatgccgtc gagcgagccg
     1021 tcttgcagca tattttcgac aacttctacg gcgtcgtgcc gcatcacgcg gatgttttcc
     1081 aaatggtttt cttctatgag tttgagcagg ttgcctacgc cgggaccgtg tacgtcgatg
     1141 gcgagaaagt cggtttcggg cagcctgcgg gcgatttctg cggttgctgt ccccataccg
     1201 aagcctattt cgaggatttt ggggcggttg cttccgaaat tggcatcaag atcggccggt
     1261 gttgcttggt aatcgatgcc gaagctgtcc cataaggtat cgatggcgcg ttgctgcgcg
     1321 gcggtcatat ggctttggcg gaggacgaaa ctgcggatgc tgcggggatg tccggcttga
     1381 cggtcgtttg gtgtttggtt ttcggcggtg tctgtcataa tgcttccgtg cgcttgtgca
     1441 atcaggatgc cgtctgaatg tgaaaggcct gttcggacgg cgggaaggga aaggggcgat
     1501 tatacctgtt tcgtttcggc agggtaggtg taacgctgtt cagacggcat tttgccattg
     1561 ttgcagcagt tcttgcagga cgcttttttg cccgtatccg ttgtttatgg cttcttgcag
     1621 gtagcggcag gctttttctt tgtccggccc gacaccgtgt ccgctgtaat ggatgcaggc
     1681 gaggttgtag aacgccatac tgtctttttt tgcggcggct ttttcaaacc atttgcgtgc
     1741 ttcattgtag tcggcggtca taccctgtcc gaagtaatac atgctgccca gattggtttg
     1801 ggctttgctg tgtccgagtt ctgcggcttc tgtgtagagt ttgagcgcgg ctgcgtattc
     1861 gggcgcgcat tgtaatccgt aatgcagggc ttgggctttt tgataaagct gttctgccct
     1921 ttgccgccta atggcggaat ctttaatgcc gccgtattgg tcaggatggt ttaacgcgct
     1981 gtcggatatg agtttctgat aggcggtaag gctgccggct tcggctgcct gccggtaata
     2041 atgccgggct ttttccgtat cgggggctat gcccaaaccg tagcggcaga tgtcgcccag
     2101 tatccgcaaa ccttcgggat ggcgttcggc ggcggctgct tcggcgtgat gcagggcaag
     2161 tttgtagttt ctttccggat gcttgccttg caggtagatg tcggcaagtg cggcatgggc
     2221 atcggggtca ttttcctgtg cggcctgttg aaaccggtaa acggctttat cgggagccgt
     2281 aggtaggatg agctcggcaa gcggggtgta ggcgggaatg tatccttgtt gtgcggcggc
     2341 gcgcaaatga ttgatagctt gggtcgtgtc ggttggtgta ccttgtccga aacggtattg
     2401 aaggccgagc tgccattgtg ccgccgccaa gccttgtgct gcagcctcgc ggtagagcag
     2461 gtgtgccgtt tcaaaatccg gcggcgtgcc gtaccggcag tattgggcaa gcaggtattg
     2521 cccgtggggg ttgttgtttt ttgcgcttgt ttttgcccat ttcagggctt cttcaaaatg
     2581 tcgggacgca tacagcaggt acatcaggcg gacttgtgct tcaggcagcc cttcctctgc
     2641 taatggtctg taaagcgata tcagggtttc cgggggtgcg ccttccaatt cttggatata
     2701 tgccagattg taacgcgcgt agggatgtcc ctgttcggcg gcgatgcgga gcatttccat
     2761 accttgttcg cggtcttggt aggggctgtc cgcgtccatc aggtgttttg ccaactcgaa
     2821 tgcggcggcg ggatgacctg ccgaggccgc ttctgtcagc agtcggcgga cttcggtaaa
     2881 gttatattgt ttttgagaca ggcgttctaa ggcctgccga tagggtaagt cgggattgtt
     2941 catatcagat cgttttccgt tttgtcgaat catcgttatt gtgttatgaa gttag
//
LOCUS       DBBZYD010000139         2990 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.139, whole genome shotgun sequence.
ACCESSION   DBBZYD010000139 DBBZYD010000000
VERSION     DBBZYD010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.139"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            378..701
                     /locus_tag="ACJJDL_001957"
     CDS             378..701
                     /locus_tag="ACJJDL_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG7574605.1"
                     /translation="MQNETINPKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSVVLIELSD
                     PSEAV"
     gene            815..>2990
                     /locus_tag="ACJJDL_001958"
     CDS             815..>2990
                     /locus_tag="ACJJDL_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HGG7574606.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     HTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLAGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT          719 a         1059 c          750 g          462 t
ORIGIN      
        1 ctttaagctt caggcgattt ttaactcttg ttgaagctgc gatttcagaa gctccgtttt
       61 agcttcgcag aaactccgct tccttcgaaa gctccgtttt cagacgacct tttggaacac
      121 cacaggcaca cgcatcgaac ggctgaatca aagttcagac cgatggcagc ccgcacccga
      181 gtttatgcgg caaacagcga ggctacggca acccgtcccc tctccctgtg ggagagggtt
      241 agggagaggg cggtaagccg caggcttaca tcaaagccga taacgcttcc gttacaactc
      301 cgcccactga aagcagcctg caacgaagcc aaaacgacaa accgcatcgt aaaccaccca
      361 acccatagga gaaccccatg caaaacgaaa ccatcaaccc gaaacagcac cttgccgcca
      421 tcaaagaata ctggcagccc gaaatcatca accgccacgg gttccaattc cgcttggtca
      481 aacttttggg cgattacggc tggcatacgc acggatacag cgacaaagtg ctgtttgccg
      541 tggagggcga catggcggtg gacttcgccg acggcggcag catgacgata cgcgagggcg
      601 agatggcggt cgtgccgaag tcggtgtcgc accgcccgcg ttcggaaaac ggctgctcgg
      661 tggtgctgat tgagttgtcc gacccgtccg aggccgtctg aaaacgaagt ttccgaagga
      721 agctgagttt ctgcgaagct aaaagcagcc tgcaccttca atcaatatgc cgaaaataca
      781 accccaccgc acaccaacac acaaaggaaa tcccatgaca cgcttcaaat attccctgct
      841 gtttgccgcc ctgttgcccg tgtacgcgca ggccgatgtt tctgtttcag acgaccccaa
      901 accgcaggaa agcactgaat tgccgaccat caccgttacc gccgaccaca ccgcgagttc
      961 caacgacggc tacactgttt ccggcacgca caccccgctc gggctgccca tgaccctgcg
     1021 cgaaatcccg cagagcgtca gcgtcatcac atcgcaacaa atgcgcgacc aaaacatcaa
     1081 aacgctcgac cgcgccctgt tgcaggcgac cggcaccagc cgccagattt acggctccga
     1141 ccgcgcgggc tacaactacc tgttcgcgcg cggcagccgc atcgccaact accaaatcaa
     1201 cggcatcccc gttgccgacg cgctggccga tacgggcaat gccaacaccg ccgcctatga
     1261 gcgcgtagaa gtcgtgcgcg gcgtggcggg gctgctggac ggcacgggcg agccttccgc
     1321 caccgtcaat ctggtgcgca aacgcccgac ccgcaagcca ttgtttgaag tccgcgccga
     1381 agcgggcaac cgcaaacatt tcgggctggg cgcggacgta tcgggcagcc tgaacaccga
     1441 aggcacgctg cgcggccgcc tggtttccac cttcggacgc ggcgactcgt ggcggcagcg
     1501 cgaacgtagc cgcgatgccg aactctacgg cattttggaa tacgacatcg caccgcaaac
     1561 ccgcgtccac gcaggcatgg actaccagca ggcgaaagaa accgccgacg cgccgctcag
     1621 ctacgccgtg tacgacagcc aaggttatgc caccgccttc ggcccgaaag acaaccccgc
     1681 cacaaattgg gcgaacagcc gccaccgtgc gctcaacctg ttcgccggca tcgaacaccg
     1741 cttcaaccaa gactggaaac tcaaagccga atacgactac acccgcagcc gcttccgcca
     1801 gccctacggc gtagcaggcg tgctttccat cgaccacaac accgccgcca ccgacctgat
     1861 tcccggttat tggcacgccg acccgcgcac ccacagcgcc agcgtgtcat tgatcggcaa
     1921 ataccgcctg ttcggccgcg aacacgattt aatcgcgggt atcaacggtt acaaatacgc
     1981 cagcaacaaa tacggcgaac gcagcatcat ccccaacgcc attcccaacg cctacgaatt
     2041 ttcccgcacg ggtgcctacc cgcagcctgc atcgtttgcc caaaccatcc cgcaatacgg
     2101 caccaggcgg caaatcggcg gctatctcgc cacccgtttc cgcgccgccg acaacctttc
     2161 gctgatactc ggcggcagat acagccgtta ccgcaccggc agctacgaca gccgcacaca
     2221 aggcatgacc tatgtgtccg ccaaccgttt caccccctac acaggcatcg tgttcgacct
     2281 gaccggcaac ctgtctcttt acggctcgta cagcagcctg ttcgtcccgc aatcgcaaaa
     2341 agacgaacac ggcagctacc tgaaacccgt aaccggcaac aatctggaag ccggcatcaa
     2401 aggcgaatgg cttgcaggcc gtctgaacgc atccgccgcc gtgtaccgcg cccgtaaaaa
     2461 caacctcgcc accgcagcag gacgcgaccc gagcggcaac acctactacc gcgccgccaa
     2521 ccaagccaaa acccacggct gggaaatcga agtcggcggc cgcatcacgc ccgaatggca
     2581 gatacaggca ggttacagcc aaagcaaaac ccgcgaccaa gacggcagcc gcctgaaccc
     2641 cgacagcgta cccgaacgca gcttcaaact cttcactgcc taccactttg cccccgaagc
     2701 ccccagcggc tggaccatcg gcgcaggcgt gcgctggcag agcgaaaccc acaccgaccc
     2761 tgccacgctc cgcatcccca accccgccgc caaagcccgc gccgccgaca acagccgcca
     2821 aaaagcctac gccgtcgccg acatcatggc gcgttaccgc ttcaatccgc gcgccgaact
     2881 gtcgctgaac gtggacaatc tgttcaacaa acactaccgc acccagcccg accgccacag
     2941 ctacggcgca ctgcggacag tgaacgcggc gtttacctat cggtttaaat
//
LOCUS       DBBZYD010000140         2989 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.140, whole genome shotgun sequence.
ACCESSION   DBBZYD010000140 DBBZYD010000000
VERSION     DBBZYD010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.140"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..682
                     /locus_tag="ACJJDL_001959"
     CDS             <1..682
                     /locus_tag="ACJJDL_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HGG7574607.1"
                     /translation="EQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATK
                     WLSDTPGQDAYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVI
                     RKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPA
                     IITHRNYHRYGENDYSTSVGSCINGFTVRYYPFIREKQQLTQQELVGYHQQVEQLVQS
                     FVNNPSKK"
     gene            699..>2989
                     /locus_tag="ACJJDL_001960"
     CDS             699..>2989
                     /locus_tag="ACJJDL_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7574608.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLEKFDRVALQHFSQYVDLINENNGR
                     LPNTSEIERSYYKAVTENGVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNAQA
                     VNNPNGSEWDNRKQLISALDKGFDGSFKEKHFTFLQSVIMDVTKLGVEYTIDGWQKIG
                     GWGNGIINDLYKSVAKREWTGIFEIVNNNIKQFRDLFPNPEGWIDDGHQCFAPWVKET
                     KKRNGKYHVYDPLALDLDGDGIETVATKGFAGSLFDHTNNGIRTATGWVSADDGLLVR
                     DLNGNGIIDNGAELFGDNTKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVW
                     QDLNQDGISQANELRTLEELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTDGTTAKM
                     GDLLLAADNLHSRFKDKVELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSA
                     AETKEAQLALLDNLIHKWAETDSNWGKKSPMRLSIDWTQTANEGIALTPSQVAQLKKN
                     ALVSLSDKAKAAIDAARDRIAVLDAYTGQDSSTLYYMSEEDALNIVKVTNDTYDHLAK
                     NIYQNLLFQTRLQPYLNQISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEML
                     AYGELRSWYEGRRLMADYVEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNV
                     GFGHNKNVSLYGNDGNDTLIGGAG"
BASE COUNT          939 a          593 c          683 g          774 t
ORIGIN      
        1 agaacaaacc agtttcaaca atcccgagcc aatgacagga tttgaacata cggttacatt
       61 tgattttcag ggcaccaaaa tggttatccc ctatggctat cttgcacggt atacgcaaga
      121 caatgccaca aaatggcttt ctgacacgcc cgggcaggat gcttactcca ttaatttgat
      181 agagattagc gtctattaca aaaaaaccga ccaaggctgg gttcttgagc catacaacca
      241 gcaaaacaaa gcacacttta tccaatttct acgcgacggt ttggatagcg tggacgatat
      301 tgttatccga aaagatgcgt gtagtttaag cacgactatg ggagaaagat tgcttactta
      361 cggggttaaa aaaatgccat ctgcctatcc tgaatatgaa gcttatgaag ataaaagaca
      421 tattcctgaa aatccatatt ttcatgaatt ttactatatt aaaaaaggag aaaatccggc
      481 gattattact catcggaact atcataggta tggagagaac gattacagca ctagcgtagg
      541 ttcctgtatt aacggtttca cggtacggta ttacccgttt attcgggaaa agcagcagct
      601 cacacagcag gagttggtag gttatcacca acaagtagag caattggtac agagttttgt
      661 aaacaatcca agtaaaaaat aatttaaagg atcttattat gaatgagggt gaagttgttt
      721 taacaccaga acaaatccaa accttgcgtg gttatgcttt ccgtggcgat acctatggcg
      781 gttggcgtta tttggctaat ttgggtgacc gttatgcgga tgatgctgct gcaattgtcg
      841 gtaaggatgc aaacttaaat ggtttgaatt tatggatgaa aaaaggtgtg gaaaacctat
      901 gggatgatac ggtcggtaaa aagacccgtt tagagaaatt tgatcgggtt gcattgcaac
      961 atttcagcca atatgtagat ctaattaatg aaaataatgg tagattacct aacactagtg
     1021 aaattgagag aagttactat aaagccgtta ccgaaaatgg tgtttcttct agtgcagcta
     1081 ttgatttagt tattaatcgc tcacttccgg atatggcaga tggttattgg gcattaggtt
     1141 tggggataga agccgaacgt atccacaatg cgcaagcagt aaataatccg aacggtagcg
     1201 aatgggataa tagaaagcag ttaatatctg ctttagataa aggatttgat ggatctttta
     1261 aagagaagca ttttactttt ttacaatctg tgataatgga tgtaacaaag ttaggtgttg
     1321 aatatacaat agatggttgg caaaaaattg gaggttgggg taatgggata atcaatgatt
     1381 tatataaaag tgttgcaaaa agagagtgga ctggaatatt tgagatcgtt aataataaca
     1441 tcaagcaatt tagagatctg ttcccaaatc cggaaggctg gatcgatgat ggtcaccaat
     1501 gtttcgctcc ttgggttaaa gaaactaaaa aacgcaatgg caaatatcat gtctacgacc
     1561 ccctcgccct agatttggac ggagacggta tagaaaccgt tgccaccaaa ggctttgcag
     1621 gcagcttatt tgatcacacc aacaacggta tccgcaccgc caccggttgg gtttctgccg
     1681 atgacggttt actcgtccgc gatttgaacg gcaacggcat catcgacaac ggtgcggaac
     1741 tcttcggcga caacaccaaa ctggcagacg gttcttttgc caaacacggc tacgcggctt
     1801 tggccgaatt ggattcaaac ggcgacaaca tcatcaacgc ggcagacgcc gcattccaaa
     1861 ccctgcgtgt atggcaggat ctcaatcagg acggcatttc ccaagctaat gaattgcgta
     1921 cccttgaaga attgggtatt caatctttgg atctcgccta taaagatgta aataaaaatc
     1981 tcggtaacgg taacactttg gctcagcaag gcagctatac caaaacagac ggtacaaccg
     2041 caaaaatggg ggatttactt ttagcagccg acaatctgca cagccgcttc aaagacaaag
     2101 tggaactcac tgccgaacag gcaaaagccg ccaatcttgc gggcattggt cgtctgcgcg
     2161 atttgcgcga agctgccgca ttgtccggcg atttggccaa tatgctgaaa gcttattctg
     2221 ccgccgaaac taaagaagca cagttggcat tgttagataa tttgattcac aaatgggcgg
     2281 aaaccgattc gaactggggc aaaaaatcgc caatgcgact ttcaatcgat tggacgcaaa
     2341 cggctaatga aggtattgca ctgacaccat cccaagtagc acaactaaaa aagaacgctt
     2401 tagtttccct ttctgataaa gctaaagcag ctattgacgc cgcccgcgac cgcattgccg
     2461 tgcttgatgc ctacacgggg caggattcca gcacactcta ttacatgagc gaagaagacg
     2521 cgcttaatat cgtcaaagta accaacgata catacgacca tctcgccaaa aacatctacc
     2581 aaaacctgtt gttccaaacc cgtttgcagc catatttgaa tcaaatcagt ttcaaaatgg
     2641 aaaatgatac gttcactttg gattttagtg gtcttgttca agcatttaac catgtcaaag
     2701 aaactaatcc gcaaaaagct tttgtggatt tggccgagat gcttgcatat ggcgaacttc
     2761 gttcttggta tgaaggccga agactaatgg ccgattatgt ggaggaggca aaaaaagcag
     2821 gtaaatttga agattaccag aaagtgttgg gtcaggagac cgttgcatta ttagctaaaa
     2881 catcgggtac gcaagcagat gatatcctgc aaaatgtagg ctttggtcat aataaaaatg
     2941 tttctttata tggtaatgac ggcaacgaca ctctgatcgg cggtgccgg
//
LOCUS       DBBZYD010000141         2926 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.141, whole genome shotgun sequence.
ACCESSION   DBBZYD010000141 DBBZYD010000000
VERSION     DBBZYD010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.141"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            98..655
                     /locus_tag="ACJJDL_001961"
     CDS             98..655
                     /locus_tag="ACJJDL_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HGG7574609.1"
                     /translation="MGFGCREGREFCKGLSLPEIIRDLLEMPSETAIADITRTYSAHY
                     LNPNNRNMSLFPQALPCLDKLKAQGYWLAVATGKGRAGLDNAISQTATGGYWLATACA
                     GEYPSKPSPEMVFGICGKLGLDPKEALVVGDTAHDLHMAANAGAAAVGVATGAHSREQ
                     LRTAPHLAVLDGLSELPGFLAQHYA"
     gene            complement(742..1710)
                     /gene="ispH"
                     /locus_tag="ACJJDL_001962"
                     /gene_synonym="lytB"
     CDS             complement(742..1710)
                     /gene="ispH"
                     /locus_tag="ACJJDL_001962"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HGG7574610.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAAGIGTDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1739..2236)
                     /gene="lspA"
                     /locus_tag="ACJJDL_001963"
     CDS             complement(1739..2236)
                     /gene="lspA"
                     /locus_tag="ACJJDL_001963"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HGG7574611.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKY"
BASE COUNT          683 a          871 c          728 g          644 t
ORIGIN      
        1 gcccggatgc ctgattatca ggtatccggg caggattaag ggggtatttg ggtagaatta
       61 ggagatattt ggggcgaaaa cagctgaaaa tctgtgtttg ggtttcggct gtcgggaggg
      121 aagggaattt tgcaaaggtc tcagcctgcc cgaaatcatc cgcgacctgc tcgaaatgcc
      181 gtctgaaacc gccattgccg acatcacacg cacttattcc gcacattacc tcaatcccaa
      241 caaccgcaat atgtccttat ttcctcaggc actgccctgt ctggacaagc tcaaagcaca
      301 aggatactgg cttgccgtcg ccacgggcaa agggcgggcg ggtttggaca acgccatcag
      361 ccaaaccgcc accggcggct attggctcgc caccgcctgc gcgggggaat atccctccaa
      421 accctcgccc gaaatggtat tcggaatctg cggcaaactg ggacttgacc cgaaagaggc
      481 attggtcgtc ggcgatacgg cgcacgacct gcatatggcg gcaaacgcag gcgcggcggc
      541 agtcggcgtg gccaccggcg cacattcgcg cgaacagctc cgcaccgcac cgcatctcgc
      601 cgtattggac ggtttgtccg aactgcccgg ttttcttgca cagcattacg cctgattggt
      661 ttccgcatca gacactcaaa acaaatgccg tctgaagcct gttcagacgg catttgtgtt
      721 gcccaaacat tcaacgcttg ctcaacgttt gcacaaatcg ggtttggttt cgccctcgcg
      781 gcgcagctct ttgggcagga cgaacacaat gctttcttcc gcaccctcgc cttcgcgtac
      841 ggtttcgtgc ccccatccgc gtatggttgc cagtacttcc cgcaccaaca cttcgggcgc
      901 ggacgcgcct gccgttacgc cgactttgtt cttgccctca aaccacgcgc gttgcaggta
      961 gcctgcattg tccaccatat acgcatcggt tccgatgcct gccgccactt cgcgcaggcg
     1021 gttgctgttg gacgaattgg gcgaaccgac cacaatcacg atgtcgcact gttctgccaa
     1081 ctctttgacg gcggtttgcc ggttggtcgt cgcatagcag atatcttcct tgtgcggatt
     1141 gcggatattg gggaaacgcg cgttcagcgc ggcgatgatg tctttggttt catcgaccga
     1201 gagcgtggtt tggctgacat aggcgagttt gtcggggttt ctgacttcga gttttgccac
     1261 atctccgacc gtttcgacca aaagcatttt gcccggcgca agctgcccca tcgttccttc
     1321 aacctcgacg tgccccttat gcccgatcat gatgatttca cagtcttggg catccagtcg
     1381 ggcgacttcc ttatgcactt tcgtcaccag cgggcaagtc gcatcaaata cgcggaaacc
     1441 gcgctccgcc gcttcttgcc gcaccgcctt cgatacgccg tgtgccgaat aaaccagtgt
     1501 cgcgcccggc ggcacttccg ccaagtcttc aataaacacc gcaccttttt cacgcaggtt
     1561 gtccacgacg aatttgttgt gaacgacttc gtggcgcaca taaatcggcg cgccgaattc
     1621 ttccaaagca cgttcgacaa tactgattgc ccgatccacg ccggcgcaga agccgcgcgg
     1681 attggcaaga atgatggttt tctcgttcat aagcccggta tttcgttttc agacggcatc
     1741 aatatttttc ttcttgggtt ttacggtgga cgatgttgtc caacactgcc aacaccgcac
     1801 cgacgcagat aaagctgtcg gcaatattaa aggcgggata aaaccaattt tgccaataaa
     1861 acaataagaa atcgacgaca tgaccgtgta tcaggcggtc gatgacattg cctaacgcac
     1921 cgccgataat catcgccgca cccgttttgc cgagggttgc aaactcatcg cgcaagatgg
     1981 cgcgtaccaa atacgcgctc accgccaccg ccagcaccaa aaaaaagtat ttttgccagc
     2041 cgccctgatc ggcaaggaag ctgaacgccg cacccgggtt gtacaccaag gtcaaatcga
     2101 aaaaggaagg aatgacattg acgcgttccc gatactgaaa cgacgacagc accgcccact
     2161 tcgaccactg gtccagcacg atggcggcaa gtgccaatac ccaatagcgc gttttacttg
     2221 aaacagatga agacatattt ttcaacagcc ggtaaaagag taccatttta cccgaaaacc
     2281 ccctgcctgt acccgaaacg gcaaatgccg taatcttgaa acccgtcatt cccgcgcagg
     2341 cgggaatcta gacctgtccg cacagaaact tatcggataa aaacagttgc tcaaaccccg
     2401 cgttctagat tcccactttc gtgggaatga cggttcagtt gcgttccaac aacaccgcaa
     2461 tctcgaaatc cgtcattccc gcgcaggcgg gaatccagac ctccgacgcg gcgggaatct
     2521 atcggaaatg actgaaaccc cgagattcta gattcccact ttcgtgggaa tgacggttca
     2581 gttgcgttcc gacaacaccg taatctcgaa atccgtcatt cccgcacagg cgggaatcca
     2641 gacccctgac gcggcgggaa tctatcggaa atgactgaaa ccccgagatt ctagattccc
     2701 actttcgtgg gaatgacggt tcagttgcgt tccgacaaca ccgcaatctc gaaatccgtc
     2761 attcccgcac aggcgggaat ccagacccac gacgcggcgg gaatctatcg gaaatgactg
     2821 aaacctcgag attctagatt cccactttcg tgggaatggc ggttcagttg cattccgaca
     2881 acaccgtaat cttgaaaccc gtccgacaac accgtaatct taaaac
//
LOCUS       DBBZYD010000142         2910 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.142, whole genome shotgun sequence.
ACCESSION   DBBZYD010000142 DBBZYD010000000
VERSION     DBBZYD010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.142"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            43..1260
                     /locus_tag="ACJJDL_001964"
     CDS             43..1260
                     /locus_tag="ACJJDL_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7574612.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTSIAIIGLANIAGCIF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            1257..1388
                     /locus_tag="ACJJDL_001965"
     CDS             1257..1388
                     /locus_tag="ACJJDL_001965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574613.1"
                     /translation="MKECRLKTLRRHFPNTPPVSGLHDTQISLIKPQTTAAIKPPFK"
     gene            complement(1463..1603)
                     /locus_tag="ACJJDL_001966"
     CDS             complement(1463..1603)
                     /locus_tag="ACJJDL_001966"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574614.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1616..2740
                     /locus_tag="ACJJDL_001967"
     CDS             1616..2740
                     /locus_tag="ACJJDL_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HGG7574615.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYHIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDSRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGDLERLAARDIIRFPGFVNNVSEVIKAHH
                     IFVLPSYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKM
                     IYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          684 a          869 c          683 g          674 t
ORIGIN      
        1 cactataaaa tccgcaaact taaccgactc aaaatacaca ttatgacgca caccgcatcg
       61 aaaacaccca aattttggct gaccatcacc gccgccgcat tcatcctgct gattaccatc
      121 ggcatgagga tgacgctcgg actgttcgtc caacccgtcg tcaacaccac cgaattgagc
      181 attgcccaat tcagcctcat catcgccgtt ttccaactga tgtggggcat atcgcaacca
      241 ttgtccggcg cgcttgccga ccgtttcggc gcgttcaggg tattaagcgg cggcgccgtc
      301 ctgctcgtct gcgcctgcct gattgccccc aacatcccga cttattgggg gctgatgatt
      361 gccgtcgggc tgctgctcgc attcggcacc ggttccggcg gtttctccat cattatgggg
      421 caggtcgccg cccaagtccc cgcacacaaa cgcggcttgg catccggact ggtcaacgcc
      481 ggcggttcgg caggacaatt cctgttcgca ccgctggttc aaggactcgt cgtcctgccc
      541 gaagtcggct ggacgggcac attttacgtt tggggcgcaa tcgccctgct gattctgcct
      601 gtctcatggt ggcttgccgg cggcaacaac gccgcccaca cccaacacgc ccaagccaca
      661 cacggacaaa gcctcggaga agcagtcaaa accgccttca aaaccccaag ctacatcctg
      721 ctgcacctaa gcttttttgc ctgcggcttc cacatcgcct ttctcgtaac ccacctaccc
      781 acggaagtcg ccctgtgcgg actgcccgcc accgtcgcct cgacatccat cgccatcatc
      841 ggactggcaa acatcgccgg ctgcattttt tccggctggt gcacaagccg cgttcggggc
      901 aaatacgtcc tgttcggact gtacgcctcg cgcgccgcga tgatactcat ctacattttt
      961 tcgcccaaga ccgacctcaa cttctacatt ttcgccgccg cactcggatt tacctggctc
     1021 gccaccgtca cgccgaccgc ctccattacc ggcaaactct tcggcacacg ctacctcgcc
     1081 accctgttcg gactgacgat gctcagccac caaatcggcg gattcctcgg ctcgtacatc
     1141 ggcggcatcg tgattacaca attcggcgac tacggctgga tgtggtacgc cgacgcactg
     1201 ctggcgggaa ccgccgccct cctcaacctc cccatccgcg aaccccgaac cgccgcatga
     1261 aagaatgccg tctgaaaacc ctcagacggc attttccaaa caccccgccc gtttccggac
     1321 tgcacgacac gcaaatcagc cttatcaaac cgcaaacaac cgccgcgatt aaaccgccat
     1381 tcaaataagt ccgttttccc ttcgggtgta aaatcatcac aaaacgcgat actgtatatc
     1441 gccgggcgtt atgcagcgga tttcaggata aaatgccgtc tgaagccgcc cctgcccggg
     1501 cgggcgaagc gtcggatgcg gtgcgcttgg caaaggtttg cccgccgcgc cccgtatccg
     1561 gcatttcatc aatgcagacc gcatttccaa tcctataatt caaggtgtcc gccttatgaa
     1621 aatcgttttt atcacaacag tcgcatccag catttacggt ttccgcgccc ccgtcattaa
     1681 aaaattaatc ggcaaaaacc atcaggtgta tgcctttgta tcggagtttt ccgataatga
     1741 attggatatt atcagggaaa tgggggtaac acccgttacc taccgttcaa accgcagcgg
     1801 gctgaacccg ttttccgata taaaatccac cttcctcatc tttaaagaac tcaaaaaaat
     1861 atcgccggat ttggttttcc cttatttcgc aaaacccgtg attttcggca cttttgccgc
     1921 aaaactggca ggcgtgccca gaatcgtcgg gatgctggaa ggtttgggat tcgcatttac
     1981 cccgcagccg gaaggcatac cgttaaaaac aaaaatcata aaggggattt tgattgcctt
     2041 gtaccacatt gccctgccga tgttggaaag cctgattgta ttaaaccccg acgacaaaga
     2101 cgaactgacg gacaaatacg gcatcaaaat aaaaaacatc catattttgg gcggaatcgg
     2161 tctggattcg cggcaatatc cttattccga ggcggatatt cccgatgaaa aagaacccgt
     2221 aaaattcctc tttatcggca gatttctgaa agaaaagggg attgatgatt ttattcgggc
     2281 ggcggaacag gttaaggaca aataccccga tacggttttt accgctttgg gcgcaatcga
     2341 caaatcacgc ggggggggcg atttggaacg gcttgccgcc cgcgatatta tccgtttccc
     2401 cggttttgtg aacaatgttt ccgaagtgat aaaggcgcat catatattcg tattgccgtc
     2461 ttatagggaa ggcgttcccc gaagcactca ggaggcaatg gccgtcggca gggcagtgat
     2521 tacgacggat gtccccggat gcagggaaac ggtcgccgac aaggtcaacg gcttcctgat
     2581 cgagccttgg aatccccgca tcttagccga aaaaatgatt tattttatcg aaaacaggga
     2641 agccgtccgc ctgatgggga atgcaagtta tgcgattgcc aaagataaat tcgatgccga
     2701 aaaagtcgat ttgaaattgc tcgatatttt gaaggcgtaa acaaggctgc ccgcttttga
     2761 gtttcggtca tttctgataa acccccgtca ttcccgccac acccccgtca ttccctcgaa
     2821 agcgggaatt caggttcgtt tagtttcggt catttccgat aaattcttgc aactttgcgt
     2881 ttctagattc ccactttcgt gggaatgacg
//
LOCUS       DBBZYD010000143         2789 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.143, whole genome shotgun sequence.
ACCESSION   DBBZYD010000143 DBBZYD010000000
VERSION     DBBZYD010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.143"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            1..478
                     /locus_tag="ACJJDL_001968"
                     /pseudo
     CDS             1..478
                     /locus_tag="ACJJDL_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(525..1934)
                     /gene="dacB"
                     /locus_tag="ACJJDL_001969"
     CDS             complement(525..1934)
                     /gene="dacB"
                     /locus_tag="ACJJDL_001969"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HGG7574616.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGISDTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDIADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            2099..2665
                     /locus_tag="ACJJDL_001970"
     CDS             2099..2665
                     /locus_tag="ACJJDL_001970"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HGG7574617.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          669 a          648 c          772 g          700 t
ORIGIN      
        1 agatgaaagt tattttggcg gacaacgcaa aggcaaacgc ggtcgcggtg ctgccggtaa
       61 agtcgccgta ttcggtcttt tgaagcgaaa tggtaaggtt tatacggtta cagtaccgaa
      121 tactcgaacc gctactttat ttcctattat ccgtgaacaa gtgaaacctg acagcattgt
      181 ttatacggat tgttatcgta gctatgatgt attagatgtg agcgaattta gccattttag
      241 cttcgctgaa acttcgtttt cgtatcaatc acagcacaca ttttgctgaa cgacaaaacc
      301 atattaatgg aattgagaac ttttggaacc aggcaaaacg tcatttacgc aagtttaacg
      361 gcattcccaa agcgcatttt gagctgtatt taaaggagtg cgaatggcgt tttaacaaca
      421 gtgagataaa agttcttgtt ccattttaaa acaattagta aaatcgagtt tgtcctagtt
      481 atctaggaca gccccttaaa tttaatccac tatattttcc tgtttcaggc tcggcgttct
      541 ttgcacatca gtttcgcatc cagccagcca tcgccgccgg agatgatgtt gttggcaacg
      601 aagttgtcca agtcgggcag cagggaaacg gcgcggccgc tgttgatgat gacgaccacc
      661 gccatcggtt tgtcgcccag ccaataacct gcaagggcgc ggacattgtt gagcgtgccg
      721 gtttttaagc gcaacagccc gccgctttgt ttgaagcggt tgcgtaaagt cccgtctgtg
      781 ccggcgatgg gtagcgtatc gatgaaatct tgtgcaaacg ggctgaaata agccgtttcc
      841 aacatttgcg ccatcattct cgccgttacc ctttcttttc tggacaggcc tgaaccgttt
      901 tccaaaacca aatccgcaat atcgatgccc gacacggcaa gttcgcgccg gacggcagat
      961 gccgcctgtt cggaaacggc gggcagtttg ccgtcgccgc cgagtttgag gaagacggaa
     1021 cgcgcaatta gattgtccga acgcttgttc atgtccgtca aaatttcctt catcggcttt
     1081 gagtgtgcaa cggcaagcgt ctgcgcgcct tccggcgtgt cggatatgcc gatgccgtct
     1141 gaaatccgtc cgccgccgag cagccagtgg ttggtaaaac tttgccggat cagttcgtca
     1201 agcgcgaaca tccggacacc gacaggcttg cccaaacagc tctcgggaat attgccgcgc
     1261 aatttcagcg tattgtccga aaaagatgca cgcatcagtt ttttgatcga agggcaggca
     1321 gcttgggagg cggtaatttt caagttgttt tgggcgaaaa tatgcggcaa aggcggatcg
     1381 gtgaggatgt cggtactgtc ggcggcattg cgttcggcgc gcaccataac cataccggca
     1441 gacagcatag ttggattggg gggcgtcata aacggcgaac cgctgtcggc ttcgaaatcg
     1501 tcggggctgc cgacttcgcc ccacaggctg tggtcgagca tcaggtgtcc cgtgatattg
     1561 cgtatgcctt gttcgcgcaa ctggcgttgg acggcaagca ggttttcctg attgaaaacg
     1621 gggtcgccgc tgcccgccca atacaggttt ccgtcaagcg tgccgtcgtt taccgtaccg
     1681 ttgcttttaa actcggtcgc ccagcggtaa ttgctgccga aggttttgaa ggcggcaaac
     1741 gcggtaacga gtttcattgt ggaggcgggg ttgacgggga catccgagcg gtggtcaatg
     1801 atgacttttc cgctgtcaag ctcttggaca tatacggcga tttcgttttg cggaatgcgg
     1861 ccggtatcga gcgcgtgtgc ggcgagggag gcgagaagca gcagcaggga ggccgctgtt
     1921 ttggggaaat tcataggtaa atctgttaca taaaaaaagc aattataagg caaagccgga
     1981 taagtgggaa cgctgtggcg gcgggccggc ttgtttgcag gggaaatcac atatataata
     2041 atcgctatca ttatgaaatg attgagacgc acaaacttaa tattcaggag gaatgattat
     2101 ggctaagaaa atcagtattt tggtgggcag cctgcgccgt gcttcttttg cgcgcaaagt
     2161 ggcattgaat gcggcggaga tgttccccga aggctggcag gcggaaatcg tcgaaatcgg
     2221 acatctgccg ctttacaatt tcgattatga cgaccctgcg gtggaagatg tgccgctgcc
     2281 cgaaagctac acggctttcc gcgaaacgat taaggcttcg gacggcattt tgttcgttac
     2341 gtccgaaaat aaccgcacca ttcccgcctg tttgaaaaat gcggtggaca tcggctcgaa
     2401 accgaatgcc gacgtggcgt ggaaaaacaa accggccggt atcatcagcc attccgtcgg
     2461 caagatgggc ggttacagtt cgcaaaaaaa cctgcgcctt gcgctgtctt atttcgatat
     2521 gcccgtaacc ggacagccgg aagtgttttt gggcaattcg ccgacgctgt ttgatgaaaa
     2581 cggcaaattg atcgactcgg caagggattt tgttcagtca tatattaatc agtttgttgg
     2641 tttgattgaa agaaatgcca aataaacaaa ccaagtcgaa aggccgcaaa accggttcgg
     2701 gttttgcggc ttttttatat gggctgggca gcgtcaaggt ttgccgtttg ccggataatg
     2761 cgcggcaaat gaccggcgtg tttatagcg
//
LOCUS       DBBZYD010000144         2711 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.144, whole genome shotgun sequence.
ACCESSION   DBBZYD010000144 DBBZYD010000000
VERSION     DBBZYD010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.144"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            63..1436
                     /locus_tag="ACJJDL_001971"
     CDS             63..1436
                     /locus_tag="ACJJDL_001971"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG7574618.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGY
                     IKNLPLRHTVLFGGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKPEMREPRQRNRYESAKAQREKNTRPENAANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
     gene            1673..>2711
                     /locus_tag="ACJJDL_001972"
     CDS             1673..>2711
                     /locus_tag="ACJJDL_001972"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HGG7574619.1"
                     /translation="MVLFELRRGNAVLVFVNPLYQVCVLEKQHFPRFVIGESLLPHCM
                     EMLEEAGFADAVRAEPGFQLKNGAAFSWGSRYTEFDFTDKFSDGLGTTYQVRRAVFDK
                     ILIEEAAKQGVEVRFGHGVTAFDNSGDFVRLNIETDTGKRYELTAKFVLDASGYGRVL
                     PRLLNLETPSHLPPRQAHFTHIDDNITNPKFDRNKILITTYPQHRDVWIWLIPFGDNR
                     CSVGVVGTPDKLAGESETVLKKFVYECPMLNEILDKAVWENDFPFRSIQGYSANVKSL
                     HGRHFALLGNAAEFLDPVFSSGVTIALHSAKLAADLLAKQLKGEAADWQTEFAEPLMI
                     GVDAFRTYSGLN"
BASE COUNT          689 a          842 c          672 g          508 t
ORIGIN      
        1 tttccccatc ctatcagttt cccgtttcag acggcataag gtctgaaaga aagactacaa
       61 tcatgagtaa tccattttcc tctttaggtt tgggtacgga actggtttcc gcactgaccg
      121 cgcaaggtta cgaaaacccg acgcccatcc aagccgccgc cattcccaaa gcactcgccg
      181 gtcatgattt actagccgcc gcccaaaccg gcacaggcaa aaccgccgcc tttatgctgc
      241 ccagtctgga acgcctcaaa cgttacgcca ccgccagcac ctcgcccgcg atgcaccccg
      301 tgcgtatgct cgtgttgacc ccgacgcgcg aactcgccga ccaaatcgac caaaacgtgc
      361 agggctacat taaaaacctg ccgctgcggc ataccgtcct cttcggcggt gtcaacatgg
      421 acaaacaaac cgccgacctg cgtgccggct gcgaaatcgt cgtcgccacc gtcggacggc
      481 tgctcgacca cgtcaaacaa aaaaacatca gtttaaacaa agtcgaaatc gtcgttttgg
      541 acgaagcaga ccgcatgttg gatatggggt ttatcgacga catccgcaaa atcatgcaga
      601 tgctgccccg ccaacgccaa accctgctct tttccgccac cttctccgca ccgatacgca
      661 aactggcgca agacttcatg aacgcgcccg aaaccgtcga ggttgccgcg caaaacacca
      721 ccaacgccaa cgtcgagcag cacatcatcg ccgtcgatac cattcagaag cgcaacctgc
      781 tcgaacggct gattgtcgat ttgcatatga accaggtcat cgtgttctgc aaaaccaaac
      841 aaagcgtcga ccgcgtaacg cgcgaactgg tgcgccgcaa cctgtccgca caggcgatac
      901 acggcgaccg ttcccaacaa agcaggctcg aaacactcaa cgccttcaaa gacggcagcc
      961 tgcgcgtcct cgtcgccacc gacatcgccg cgcgcgggct ggacattgcc gaactgccct
     1021 tcgtcatcaa ttacgaaatg cccgcccagc ccgaagacta cgtccaccgc atcgggcgca
     1081 cggggcgcgc gggcgcggac ggcgtggcga tttccctgat ggacgaatcc gaacagaaaa
     1141 tgtttgaatc cattaaagag ctgaccggca acaagctgct catcgagcgc atcgagggct
     1201 tcgagccgca atggtgggaa cagggcggcg caaaaccgga aaaacccgaa atgcgcgaac
     1261 caagacaacg caaccgctac gaatccgcca aagcgcaacg cgaaaaaaac acccggccgg
     1321 aaaatgcggc aaacgatgcg ggcgcggctt gcggaaaaat cgccggacgc agccgccgaa
     1381 gccgccggga acaccggacg tgcgccctgc tccaaccgcg ttacggcgta aaataaccct
     1441 gaaaatcaaa tgccgtctga acatttcccg tttcagacgg catttttcaa accagactaa
     1501 cgcattgggc gcaaccgccc ataccggata aatttctgcc gcaaacagtt tcagacggca
     1561 tttgctgcct gtacaatata gtggattaac aaaaatcagg acaaggcgac gaagccgcag
     1621 acagtacaaa tagtacggaa ccgattcact tggtgcttca gcaccctaga gaatcgttct
     1681 ctttgagcta aggcgaggca acgccgtact ggtttttgtt aatccactat atcaagtctg
     1741 cgtgttggaa aaacagcact ttccgcgctt cgtcatcggc gaaagcctgc tgccgcactg
     1801 tatggaaatg ctggaagaag ccggatttgc cgatgccgtg cgcgccgagc ccggctttca
     1861 gttgaaaaac ggcgcggcgt tttcgtgggg cagccgttat accgaattcg atttcaccga
     1921 taaattttca gacggcctcg gcacgactta tcaagtgcgc cgcgccgtgt tcgataaaat
     1981 cctgattgaa gaagccgcca aacaaggcgt tgaagtacgt ttcgggcacg gcgtaaccgc
     2041 gttcgacaac agcggcgatt ttgtccgcct gaacatcgaa accgacaccg gcaagcgcta
     2101 tgaactgacc gcgaaattcg tcttggacgc aagcggttac ggacgcgtgc tgccgcgcct
     2161 gctaaacttg gaaacgccct cgcacctgcc gccgcgccaa gcgcatttca cgcacatcga
     2221 cgacaacatc accaacccga aattcgaccg caacaaaatc ctgattacca cctatccgca
     2281 acaccgcgac gtgtggattt ggctgattcc cttcggcgac aaccgctgtt ccgtcggcgt
     2341 ggtcggcacg cccgacaaac ttgccggcga atcggaaaca gtgttgaaaa aatttgttta
     2401 cgaatgcccg atgctgaacg aaattttgga caaagccgtt tgggaaaacg attttccgtt
     2461 ccgctccatc caaggctatt ccgccaatgt gaaatcgctg cacggcaggc atttcgcgct
     2521 attgggcaat gccgccgagt tcctcgatcc cgtgttctcg tcgggcgtaa ccatcgcgct
     2581 gcactccgcc aaacttgccg ccgatctgtt ggcaaaacaa ctcaaaggcg aagccgccga
     2641 ttggcaaacc gaatttgccg aacccttgat gatcggcgtg gacgcgttcc gcacctatag
     2701 tggattaaat t
//
LOCUS       DBBZYD010000145         2690 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.145, whole genome shotgun sequence.
ACCESSION   DBBZYD010000145 DBBZYD010000000
VERSION     DBBZYD010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.145"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(27..689)
                     /locus_tag="ACJJDL_001973"
     CDS             complement(27..689)
                     /locus_tag="ACJJDL_001973"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7574620.1"
                     /translation="MIQAVLFDLDGTLADTALDLGGALNTLLARHGLPPKSMDEIRNQ
                     ASHGAAGLLKLGAGITPDHTDYARWRTEYLDEYDSRYAQDTTLFGGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(750..1715)
                     /locus_tag="ACJJDL_001974"
     CDS             complement(750..1715)
                     /locus_tag="ACJJDL_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HGG7574621.1"
                     /translation="MSHHHEHHHHDHSHAHTHTANKKVLRVSFIIIAAFMLLEAFGGW
                     LTHSLALLSDAGHMFSDAFSLGVALWAFKLGEKETTLQKTFGYKRFEILTAMFNGLSL
                     VVIAVLIFYEAVKRLLYPPEIATLGMLVISVVGLLVNIGVAVYMLKNSDTEANVNMRG
                     AYLHVLSDLVGSVGAIAAAVLMMAFGWQWADPLASVFVAALVGRSGWSLLKQTLHILM
                     EGAPENIHTDDLLAVIRNTDGVKSVHDLHVWTITSNINVLSCHIVVDGSMTVAESEQI
                     AYRIEHELSHKNIGHCTIQIESERHPHPDSVLCANETDGAHHHHH"
     gene            complement(1761..2588)
                     /locus_tag="ACJJDL_001975"
     CDS             complement(1761..2588)
                     /locus_tag="ACJJDL_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HGG7574622.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNTPP
                     LDFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRERLRAFGFDYGDFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPVALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQSKKVV"
BASE COUNT          528 a          686 c          841 g          635 t
ORIGIN      
        1 ctatatgttt gtggggcgga tatttttcag ggctgtattt tgtccagaca ttcgagcaga
       61 tcgagtggcg tgcggatgtg gaaatccgcc tgccatgagc cggtatcgtc ttcgggagcg
      121 atgtagcccc attcggcgag gacggttttc atgccggcgt tgcggcctgc ttggatgtcg
      181 cgttcggcat caccgacgta gagtgtgtgt tgcgggtcgg cgtggatttg tccgcacgca
      241 tacagcatgg gtttgatgct gggcttgggt tcgccgcagg tgtcgccgct gacgacgacg
      301 gcgggtggga tgatgaagcc gagtttgggg acgagtttgt cggtgaagcg cataggtttg
      361 ttggtgatga tgccccattt gatgccgcgt ctgtcgagtt cggcgatgag ttcgtttacg
      421 ccgccgaaga gggtggtgtc ttgggcgtag cggctgtcgt attcgtcaag gtattcggtg
      481 cgccatcggg catagtcggt gtggtcgggg gtgatgcctg cgccgagttt gagcagacct
      541 gccgcgccgt ggctggcttg gttgcggatt tcgtccatgc ttttgggcgg cagtccgtgg
      601 cgggcgagca gggtattgag tgcgccgccg aggtctaggg cggtgtcggc gagcgtgcca
      661 tcgaggtcga acaatacggc ttgtatcatg tgttttcctt tggtttttcg atggggtcgt
      721 ctgaaaaggg tttcagacga cctctgggtt tagtggtggt gatggtgtgc gccgtcggtt
      781 tcgttggcac ataagacgct gtcgggatgc gggtggcgtt cgctttcgat ttggatggtg
      841 cagtgtccga tgtttttgtg ggacaactcg tgttcgatgc ggtaggcgat ttgttcggat
      901 tcggcaacgg tcatgctgcc gtccacgacg atgtggcagg ataatacgtt gatattgctg
      961 gtaatcgtcc aaacgtgtaa gtcgtggacg gatttgacgc cgtcggtgtt gcggataacg
     1021 gcgagcaggt cgtcggtgtg gatgttttcg ggtgcgcctt ccatcaggat gtgcagcgtt
     1081 tgtttgagca ggctccagcc gctgcgtccg accaacgcgg caacgaacac gctggcgagc
     1141 gggtccgccc attgccagcc gaacgccatc atgagtacgg cggcggcaat cgcgccgacc
     1201 gagccgacaa ggtcgcttaa aacgtgcaga tacgcgccgc gcatgttgac gttggcttcg
     1261 gtgtcgctgt ttttcagcat ataaaccgcc acgccaatgt tgaccagcag cccgacgacg
     1321 ctaatcacga gcatgcccag cgtagcgatt tcgggcggat aaagcaggcg tttgacggct
     1381 tcgtagaaaa tcagcacggc gatgaccacc agcgacaagc cgttgaacat ggcggtgagg
     1441 atttcgaaac gtttgtagcc gaaggtcttt tgcagcgtgg tttctttttc gccgagtttg
     1501 aacgcccaca acgccacgcc caaggaaaat gcgtcgctga acatatgccc cgcgtcggaa
     1561 agcagcgcga gcgagtgggt cagccagccg ccgaacgctt ccagcagcat aaaggcggcg
     1621 atgatgatga acgacacgcg caatactttt ttgttggcgg tatgcgtgtg ggcgtgggaa
     1681 tgatcgtgat gatggtgttc gtggtggtga gacataatgt tcctcaacag aggtcgtctg
     1741 aaaatccgga ttcggggttt tcagacgacc tttttgcttt gtttcaaacc ctgctcgaaa
     1801 tcttccaaca tatccaattc gaagcggctg aagcccgctt tttcgcgcgc ttcgatgttc
     1861 acatagccgc ggaagataaa catatcgtaa cgggcaatca gactgcggaa cagggcgaca
     1921 ggttccaaac cgcgttcgcg gcagaggtgt tgataccaat ggttgccgat ggcgacatga
     1981 cccacttcgt cgcggtaaat gatgtccaat acgccgcagg tttccgaatc gccgcgctgc
     2041 gccaccttcg cgcgtatccc cggcgtaacg tccagcccgc gcgcttccaa cacgcgcggc
     2101 actaaagcca tacgcaacaa aggatcgtag gcggttttgt atgccatatc ccataaatga
     2161 ttgtgcgcct cgaaatcgcc gtaatcgaag ccgaaagcgc gcagcctttc gcgcatcagg
     2221 cggaagtggt acacctcttc cttcgccact ttcacccagt cgcggacaaa ctgaaacggc
     2281 agcgtgcgga aacggtatgc cgcgtccaaa gccagattga cggcgttgaa ttcgatatgc
     2341 gcaatcgcgt gcagcatcgc cgcatagcct tctgccgtgt tcattttgcg cggggtcagt
     2401 tgcgacggcg cgaccaaaac aggcttgtcc ggccgccctg cgcgggggaa atccagcggc
     2461 ggcgtgtttg tttcagcacc gtccatgttc tgaacggcgg caaacgcctc atccgtcagc
     2521 cgtccttttt catctgggtc gcccgaaagc agggcgcgtt ccagcaaagc ataaatatca
     2581 agtttcatct caagtccgcc gtgttcggaa aacaaatatt atagcgtttt aaaaaaacaa
     2641 gatgaggcat ataatctccg cgattcggca ttccgcgccc aaaccgtcaa
//
LOCUS       DBBZYD010000146         2617 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.146, whole genome shotgun sequence.
ACCESSION   DBBZYD010000146 DBBZYD010000000
VERSION     DBBZYD010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.146"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..554
                     /locus_tag="ACJJDL_001976"
     CDS             <1..554
                     /locus_tag="ACJJDL_001976"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574623.1"
                     /translation="SIEKSQESIRKNRNPHRVIPAQAGIQKRNATGIYRKKQKPPPRH
                     SRAGGNPETQRGRTLSEKTETLTTVIPAQAGIQKRNATGIYQKKQKPHRPSFPRRRES
                     RNTTRQDFIGKNRNPTDRHSRKSGNPATEKPQESISKNRNPTAVIPAKAGIQTRRHGN
                     LPNKTVSLDSTSQIPAFAGMTRF"
     gene            666..2468
                     /locus_tag="ACJJDL_001977"
     CDS             666..2468
                     /locus_tag="ACJJDL_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR-type extended signal peptide-containing
                     protein"
                     /protein_id="HGG7574624.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLS
                     ATVQANTTDEEDDEELEPVVRTAPVLSFHSDKEGTGEKEEVGASSNLTVYFDKKGVLK
                     AGTITLKAGDNLKIKQNTNENTNENTNASSFTYSLKKDLTDLTSVGTEKLSFSANGNK
                     VNITSDTKGLNFAKETAGTNGDTTVHLNGIGSTLTDTLLNTGATTNVTNDNVTDDEKK
                     RAASVKDVLNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGK
                     KTEVKIGAKTSVIKEKDGKLVTGKDKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKT
                     TTANGQTGQADKFETVTSGTKVTFASGNGTTATVSKDDQGNITVKYDVNVGDALNVNQ
                     LQNSGWNLDSKAVAGSSGKVISGNVSPSKGKMDETININAGNNIEITRNGKNIDIATS
                     MTPQFSSVSLGAGADAPTLSVDDEGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQL
                     KGVAQNLNNRIDNVDGNARAGIAQAIATAGLAQAYLPGKSMMAIGGGTYRGEAGYAIG
                     YSSISDTGNWVIKGTASGNSRGHFGTSASVGYQW"
BASE COUNT          843 a          670 c          624 g          480 t
ORIGIN      
        1 aatccataga aaaatcacag gaatctatca gaaaaaacag aaacccccac cgcgtcattc
       61 ccgcgcaggc gggaatccag aaacgcaacg caacaggaat ttatcggaaa aaacagaaac
      121 ccccaccgcg tcattcccgc gcaggcggga atccagaaac acaacgcggc aggactttat
      181 cggaaaaaac agaaaccctc accaccgtca ttcccgcgca ggcgggaatc caaaaacgca
      241 acgcaacagg aatttatcag aaaaaacaga aaccccaccg accgtcattc ccgcgcaggc
      301 gggaatccag aaacacaacg cggcaggact ttatcggaaa aaaccgaaac cccaccgacc
      361 gtcattcccg caaaagcggg aatccagcaa ccgaaaaacc acaggaatct atcagcaaaa
      421 acagaaaccc caccgccgtc attcccgcaa aagcgggaat ccagacccgt cggcacggaa
      481 acttaccgaa taaaacagtt tccttagatt ccacgtccca gattcccgcc ttcgcgggaa
      541 tgacgagatt ttaagttggg ggaatttatc agaaaacccc caaccccaaa aaaccgggcg
      601 gatgccgcac catccgcccc caaaccccga tttaaccatt caaacaaacc aaaagaaaaa
      661 acaaaatgaa caaaatatac cgcatcattt ggaatagtgc cctcaatgcc tgggtcgtcg
      721 tatccgagct cacacgcaac cacaccaaac gcgcctccgc aaccgtggcg accgccgtat
      781 tggcgacact gctgtccgca acggttcagg cgaatactac cgatgaagaa gacgatgaag
      841 agttagaacc cgtagtacgc actgctcccg tgttgagctt ccattccgat aaagaaggca
      901 cgggagaaaa agaagaagta ggagcaagtt caaatttgac agtatatttc gacaagaaag
      961 gagtactaaa agccggaaca atcaccctca aagcaggcga caacctgaaa atcaaacaaa
     1021 acaccaatga aaacaccaat gaaaacacca atgccagtag cttcacctac tcgctgaaaa
     1081 aagacctcac agatctgacc agtgttggaa ctgaaaaatt atcgtttagc gcaaacggca
     1141 ataaagtcaa catcacaagc gacaccaaag gcttgaattt tgcgaaagaa acggctggga
     1201 cgaacggcga caccacggtt catctgaacg gtattggttc gactttgacc gatacgctgc
     1261 tgaataccgg agcgaccaca aacgtaacca acgacaacgt taccgatgac gagaaaaaac
     1321 gtgcggcaag cgttaaagac gtattaaacg caggctggaa cattaaaggc gttaaacccg
     1381 gtacaacagc ttccgataac gttgatttcg tccgcactta cgacacagtc gagttcttga
     1441 gcgcagatac gaaaacaacg actgttaatg tggaaagcaa agacaacggc aagaaaaccg
     1501 aagttaaaat cggtgcgaag acttctgtta ttaaagaaaa agacggtaag ttggttactg
     1561 gtaaagacaa aggcgagaat ggttcttcta cagacgaagg cgaaggctta gtgactgcaa
     1621 aagaagtgat tgatgcagta aacaaggctg gttggagaat gaaaacaaca accgctaatg
     1681 gtcaaacagg tcaagctgac aagtttgaaa ccgttacatc aggcacaaaa gtaacctttg
     1741 ctagtggtaa tggtacaact gcgactgtaa gtaaagatga tcaaggcaac atcactgtta
     1801 agtatgatgt aaatgtcggc gatgccctaa acgtcaatca gctgcaaaac agcggttgga
     1861 atttggattc caaagcggtt gcaggttctt cgggcaaagt catcagcggc aatgtttcgc
     1921 cgagcaaggg aaagatggat gaaaccatca acattaatgc cggcaacaac attgagatta
     1981 cccgcaacgg taaaaatatc gacatcgcca cttcgatgac cccgcagttt tccagcgttt
     2041 cgctcggtgc gggggcggat gcgcccactt taagcgtgga tgacgagggc gcgttgaatg
     2101 tcggcagcaa ggatgccaac aaacccgtcc gcattaccaa tgtcgccccg ggcgttaaag
     2161 agggggatgt tacaaacgtc gcacaactta aaggtgtggc gcaaaacttg aacaaccgca
     2221 tcgacaatgt ggacggcaac gcgcgtgcgg gcatcgccca agcgattgca accgcaggtt
     2281 tggctcaggc gtatttgccc ggcaagagta tgatggcgat cggcggcggt acttatcgcg
     2341 gcgaagccgg ttacgccatc ggctactcga gcatttctga cactgggaat tgggttatca
     2401 agggcacggc ttccggcaat tcgcgcggtc atttcggtac ttccgcatct gtcggttatc
     2461 agtggtaagg gctttttcgc ctgtctgctg ttggggcagg cggaaggttt gaagggaagg
     2521 gtggcgattt gccgcctgag acctttgcaa aattccccaa aatcccctaa attcccacca
     2581 agacatttag gggattttcc atgagcacct tcttcca
//
LOCUS       DBBZYD010000147         2558 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.147, whole genome shotgun sequence.
ACCESSION   DBBZYD010000147 DBBZYD010000000
VERSION     DBBZYD010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.147"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            108..671
                     /gene="gmhB"
                     /locus_tag="ACJJDL_001978"
     CDS             108..671
                     /gene="gmhB"
                     /locus_tag="ACJJDL_001978"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HGG7574625.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGC
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENTAPQAD"
     gene            700..1443
                     /locus_tag="ACJJDL_001979"
     CDS             700..1443
                     /locus_tag="ACJJDL_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG7574626.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLVRKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPYASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            1440..2132
                     /locus_tag="ACJJDL_001980"
     CDS             1440..2132
                     /locus_tag="ACJJDL_001980"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HGG7574627.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHSRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGV
                     CRKTTGIRLNWRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPKAKQW
                     LKIHGRELFALG"
BASE COUNT          611 a          854 c          614 g          479 t
ORIGIN      
        1 accgtactgg tttttgttaa tccactatat cacgcggcac aggcgcatca ctgccgatat
       61 ttcagtataa tgccaccccc gacctgcccc aacccaaagg aaacgcgatg aaactcatca
      121 ttctcgaccg cgacggcgtc atcaatcagg accgcgatga cttcgtcaaa tccgttgacg
      181 agtggatacc tgtcgaaggc agcatggatg cggtggcatt tctgacgcag gcaggctgca
      241 ccgtcgccgt tgccaccaac caatccggca tcgggcgcaa atattttacc gttcaaaacc
      301 ttaccgaaat gcacgccaaa atgcaccgcc tcgtccgtca ggcaggcggc gaaatcaacg
      361 gcatctggtt ctgcccgcac accgatgccg acaactgcaa ctgccgcaag cccaaaccgg
      421 gtatgattga agacatcatc ggacgcttca acgcccaagc ctcggaaacc tggctggtcg
      481 gcgacagcct gcgcgatttg caggcaatcg atgccgtcgg cggcaaaccc gcgctggttc
      541 tgaccggaaa aggcaaaaaa acgctctccc aacacggaca cgaattgccc gaacacacac
      601 aggttttcga taccctgctc gatttctcac aatacatcat gcaggaaaac accgcaccgc
      661 aagccgactg aacataccgc attccgacaa ggcaaaacca tgctcatcat ccgcaacctg
      721 atttactggc tgatactctg ttccaccctg attttcctct ttccctttat gctgctcgcc
      781 tcgcctttcc gagacggggc gcacaagatg gcgcgggtct gggtcaaaat cctcaacctc
      841 tcgctcaaac acatcgtcgg gctcaaatac cgcatcatcg gcgcggaaaa catccccgac
      901 cgccccgccg tcatctgcgc caaacaccaa agcggctggg aaacgctcgc ccttcaggac
      961 atttttccgc cgcaggttta cgttgccaaa cgcgagttgt tcaaaatccc ctttttcggc
     1021 tggggcttga aactggtcaa aaccataggc atagaccgca acaaccgccg cgaagccaac
     1081 gagcagctca taaaacaggg gttggtgcgc aaaaacgaag gctattggat taccattttc
     1141 cccgaaggca cgcgccttgc gcccggaaaa cgcggcaaat acaaactcgg cggcgcgcgc
     1201 atggcgaaaa tgtttgagat ggacatcgtc cccgtcgccc tcaacagcgg cgaattttgg
     1261 ccgaaaaact cctttctgaa atatccgggg gaaatcaccg tcgtcatctg tccgaccatc
     1321 ccgtacgcaa gcggcagcga agccgaattg atgggaaaat gcgaacacct catcgaaacg
     1381 cagcagccgc tcatttccgg cgcaggcccg tttgccgcca aaatgccgtc tgaaaccgca
     1441 tgaccgcctt tgtccacacc ctttcagacg gcatggaact gaccgtcgaa atcaagcgcc
     1501 gtgccaagaa aaacctgatt atccgccccg ccggcacaca taccgtccgc atcagcgtcc
     1561 caccctgctt ctccgtctcc gctctaaacc gctggctgta tgaaaacgaa gccgtcctgc
     1621 ggcaaacact ggcgaaaaca ccgccgccgc aaactgccga aaaccggctg cccgaatcca
     1681 tcctcttcca cagcagacag cttgccctca ccgcccatca agacacgcaa atcctgctga
     1741 tgccgtctga aatccgtgtt cccgaaggcg cacccgaaaa acagcttgcg ctgctgcggg
     1801 actttttgga acggcaggcg cacagttacc tgattccccg cctcgaacgc cacgcccgca
     1861 ccacacaact gttccccgcc tcctcctcgc tgacctctgc caaaaccttc tggggcgtgt
     1921 gccgcaaaac cacaggcata cgcctcaact ggcggctggt cggcgcaccg gaatacgttg
     1981 ccgactatgt ctgcatacac gaactctgcc acctcgccca tcccgaccac agccccgcct
     2041 tttgggaact gacccgccgc ttcgccccct acacgcccaa agcgaaacag tggctcaaaa
     2101 tccacggcag ggaacttttc gccttaggct gacgcggacc ggaccgaccc gccgctttca
     2161 gacggcatcc gtgccggaac aggcacgcgc ccgcccgatt caaaccgcga tgacgctttg
     2221 ccgccggttc ggggcaggat ggcggcacac acgccgtctg ccgcgtttca tttcacacca
     2281 ctcttccgaa acccgaaacc cgcccggtcc gacgtgcggt atgaaacgct taagctgacg
     2341 cgaagtcttt tactgatttg cccgcgaaaa tgccgtctga aaggttttcg gacggcattt
     2401 ttttgcgttt cccaggatgg cggcggattc gtaaaaggcg gtcagggtgg attgtaggat
     2461 gggttgagac ctgccgaatc cgccgcatct gccaaatcta ccgccgtcat tcctacgaaa
     2521 gtgggaatct agaacgcggg gttaagaaaa cctgcatc
//
LOCUS       DBBZYD010000148         2493 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.148, whole genome shotgun sequence.
ACCESSION   DBBZYD010000148 DBBZYD010000000
VERSION     DBBZYD010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.148"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            168..791
                     /gene="lolA"
                     /locus_tag="ACJJDL_001981"
     CDS             168..791
                     /gene="lolA"
                     /locus_tag="ACJJDL_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HGG7574628.1"
                     /translation="MMKPHNLFKFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1064..2200
                     /locus_tag="ACJJDL_001982"
     CDS             1064..2200
                     /locus_tag="ACJJDL_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7574629.1"
                     /translation="MKKTLVAAILSLALTACGGGSDTAAQAPSAKPEAEQSGKLNIYN
                     WSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQIK
                     AGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKALG
                     TDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKAA
                     VDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVLT
                     PKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLLPEVAAKNGSFVTYAPASRPARELMD
                     EKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2332..>2493
                     /locus_tag="ACJJDL_001983"
     CDS             2332..>2493
                     /locus_tag="ACJJDL_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7574630.1"
                     /translation="MDLSIVVPIYNVESYLEACLNSIEPILSNENVELILVNDGSKDG
                     SEDICYKYID"
BASE COUNT          677 a          731 c          614 g          471 t
ORIGIN      
        1 ggcacacatt aaagggcagc gtggcgcgcc tgccttttcc gagcggtcaa aaaaatcagc
       61 cctcggaaaa cgcggtttgt aaaatgcaaa ccgcccgtaa cgccgcccgt atgattgttt
      121 tgccgcgccg atactttacg ccacacccat cccaacaagg aaaaataatg atgaaaccgc
      181 acaacctgtt caaattcctc gccgtttgct ccctgaccgt ctccgtcgct tccgcacagg
      241 cgggcgcggt ggacgcgctc aagcaattca acaacgatgc cgacggtatc agcggcagct
      301 tcacccaaac cgtccaaagc aaaaagaaaa cccaaaccgc gcacggcacg tttaaaatcc
      361 tgcgcccggg cctcttcaaa tgggaataca cttcgcccta caaacagact attgtcggcg
      421 acggtcaaac cgtttggctc tacgatgtcg atttggcaca agtgaccaag tcgtcccaag
      481 accaggccat aggcggcagc cccgccgcca tcctgtcgaa caaaaccgcc ctcgaaagca
      541 gctacacgct gaaagaggac ggttcgtcca acggcatcga ttatgtgctg gcaacgccca
      601 aacgcaacaa cgccggctac caatacatcc gcatcggctt caaaggcggc aacctcgccg
      661 ccatgcagct taaagacagc ttcggcaacc aaacctccat cagtttcggc ggtttgaata
      721 ccaatcccca actctcgcgc ggcgcgttca agtttacccc gcccaaaggc gtggacgtgt
      781 tgagcaactg atgccgtccg ccccgatgcc gtctgaaagc cgccgaggct tcagacggca
      841 ttttcacgca ggcggaacaa tgtcccgcat taccgcccga tcgggcatcg gaacggcaaa
      901 cccgtgaaaa ttaacggttg cgccccggtt gtttttgccg tttaatgcaa accttgctgc
      961 accaagggcc aagaaagccg accggccgcc cccacagctt ccgatgcagg cggccaggcc
     1021 gtccctgcaa tgttttttat ttttgaacga aaggtcgaaa accatgaaaa aaacactggt
     1081 ggcggcaatc ctgagcctcg ccttgactgc gtgcggcggc ggaagcgata ccgccgccca
     1141 agccccctcc gccaagcccg aagccgaaca atcgggcaaa ctcaatatct acaactggtc
     1201 ggattatgtc gatcccgaaa ccgtcgccgc ctttgaaaaa gaaaccggca tcaagacgcg
     1261 ttccgattat tacgacagca acgaaacact ggaggcaaaa gtcctgaccg gcaaatccgg
     1321 ctacgacctg accgcgccgt ccatcgccaa cgtcggccgg caaatcaaag cgggcgcgta
     1381 tcagaaaatc gacaaggcgc aaatccccca ttacggcaac atcgataaag atttgctgaa
     1441 aatgatggaa gccgtcgatc cgggcaacga atacgccgtc ccctatttct ggggcatcaa
     1501 caccttggca atcaacacgc ggcaggtgca aaaggcattg ggtacggaca agctgcccga
     1561 aaacgaatgg gatttggtgt tcaaccccga atacaccgcc aaactcaaat cctgcggcat
     1621 cagctatttc gacagcgcaa tcgaacagat tcccttggcg ttgcactatt tgggcaaaga
     1681 ccccaacagt gaaaatcccg aagacatcaa agccgccgtc gatatgatga aagccgtccg
     1741 aggcgacgtg aaacgcttca gctcttccgg ctatatcgac gatatggcgg cgggcaacct
     1801 gtgtgccgcc atcggttacg gcggcgattt gaacattgcc aaaacccgtg ccgaagaagc
     1861 cgcaaacggc gtggaaatca aagtattgac cccgaaaacc ggcgtgggcg tgtgggtgga
     1921 ttcctttatg attccgcgcg acgcgcaaaa cgttgccaac gcccaccgct atatcgacta
     1981 cacgctcctg cccgaggtgg cggcgaaaaa cggcagcttc gttacctacg cacccgccag
     2041 ccgccccgcg cgcgagctga tggatgaaaa atacacctcc gatgcatcga ttttcccgaa
     2101 caaagaactg atggaaaaaa gtttcatcgt atcgcccaaa tccgcagaat ccgccaaact
     2161 gggcgtgaag ctgtggcaag ggctcaaagc gggcaaataa ccggaatccc tgccgtctga
     2221 aacctttcgg gcggcaggaa acggcgcgtc cgttatcaaa cagggggcgt ttccccgccc
     2281 gcctgttatg attgggttaa gattaaaatg atttagtaaa atgagaaaga tatggattta
     2341 agtatcgtag ttcccattta taatgtcgag agttatttgg aagcgtgtct aaattccata
     2401 gaacctatat taagtaatga aaatgtcgaa cttatccttg tgaatgacgg gtcaaaagac
     2461 ggaagtgaag atatatgtta taaatatata gat
//
LOCUS       DBBZYD010000149         2462 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.149, whole genome shotgun sequence.
ACCESSION   DBBZYD010000149 DBBZYD010000000
VERSION     DBBZYD010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.149"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..300
                     /locus_tag="ACJJDL_001984"
     CDS             <1..300
                     /locus_tag="ACJJDL_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574631.1"
                     /translation="DFLFVLVNTVKAMIENTDKSQLSELDKILDGVTSQELKLAYDFC
                     QGKFGQAGFSYRRHPNYFYLSSLIATFPEFELSKADRDYLKGIINFDNYLLYELD"
     gene            344..601
                     /locus_tag="ACJJDL_001985"
     CDS             344..601
                     /locus_tag="ACJJDL_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HGG7574632.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQQ"
     gene            complement(787..1566)
                     /locus_tag="ACJJDL_001986"
     CDS             complement(787..1566)
                     /locus_tag="ACJJDL_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HGG7574633.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
     gene            2069..2462
                     /locus_tag="ACJJDL_001987"
                     /pseudo
     CDS             2069..2462
                     /locus_tag="ACJJDL_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
BASE COUNT          667 a          641 c          514 g          640 t
ORIGIN      
        1 gattttcttt ttgttttagt aaatacagtg aaagctatga tagaaaatac tgataaaagt
       61 cagctttcag agttagataa aattttagac ggtgtcacaa gtcaagaatt gaaacttgcc
      121 tatgattttt gtcaagggaa attcggtcaa gcaggttttt cttatcgtag gcacccgaat
      181 tatttttatt tgtccagttt aattgcgact tttccagaat ttgagttgtc taaagcagac
      241 cgagattacc tcaaaggaat cataaatttt gataactacc ttttatatga gttagattag
      301 tctttaatca cctcaaaacc ctatttattc aaaaggagaa aaaatgattg agctgaaatt
      361 agtagatgag agcagttttc aggcagtgct ggatttgaaa atatctgaag ctgatgaacg
      421 agcacgtttt gtggctccaa atgtacgctc tttagctgac gcatggctct accgggaaaa
      481 tgaagatgtg tttccgaggg caatctattg ggataagcaa gtggttggct ttctcctgct
      541 ggaaatagac aaggatgaag cagaatactt tatctggcgg ataatgattg gtcagcagtg
      601 aattaacaaa aatcaggaca aggcggcgag ccgcagacag tacaaatagt acggaaccga
      661 ttcacttggt gcttcagcac cttagagaat cgttctcttt gagctaaggc gagccaacgc
      721 cgtactggtt taaatttagt tcactatacc gatacatccg aatatgccag accgtctaaa
      781 cggtattcat acctcccaat cctgcacgcg cttcaaatcg ttttgcgcca aagtatccgc
      841 gtggcggtta cggctctgat attccctgtc tttcatgatg ctgcttgcca cataattcaa
      901 atgtgccttt gccgcctccg aagcctcgcc cggccgacgg ttcgatatcg cctcatacag
      961 cacgcggtgc tgcgccatca gtttcggacg cggatcttct tcctgattca gataaataag
     1021 gctgctgcgc gtctgccggt acagcatttt caacaaaccg cccgacaaat ggctgaacaa
     1081 caaattgtgc gccgcatccg caatcgtctg atggaagctg acatcggctt cgctctgatg
     1141 ttctagattg ccgctttcgc acgcctcctc aaacttttca agccaaaacc caatccgctt
     1201 caaatcggca tccgtccggc gttctgccgc caatgccgcc atacagccct cgatgtggca
     1261 gctgaaatca aaaacatcct gttcccaatt ggaatgcttg cccaaaagct cctgccaact
     1321 ttgcaaaaaa tcctgctgcg gcttgaccga aacataataa ccgtctccct gcctcgcttc
     1381 caaaacctga cgggcgacca aaacattcaa tgccgacctg accgacgggc gcgaaacgcc
     1441 gaactcttcc gccaaaacgc gttcgggcgg aatcttgccc ccttccgcgt aaaccccttc
     1501 cgcaatgcgc tcctccaata ccgacaatac ctgatcgctg attttctgag gccttaccag
     1561 tttcatcact cctcctttat aaagattccc tgcagaaccc ttccgaaata tagtggatta
     1621 acaaaaatca ggacaaggtg acgaagccgc agacagtaca aatagtacag aaccgattca
     1681 cttggtgctt cagcacctta aagaatcgtt ctctttgagc taaggcgagg caacgccgta
     1741 ctggtttttg ttcatccact atacatcaaa catcaaattg gactgaccaa tcagggcgga
     1801 ttctaatgac acgccgttcc cgccgtcaac ggcatttacc tcgcaccgcc cccgaaacac
     1861 aagaaaaaac tacaccaaac tacaattttt gttcatgcaa atatttgttt tgacaggatt
     1921 taaacgaaag ctccgattca aatctgccga accgcccaaa aatatattga cctaaatatt
     1981 aaagtttcgt aaagtaatgc aacgttgctt taattggttt gaccactatt gccgacgatt
     2041 agaaaaatat tttcggagat gttcaattat ggaaacttgg gttcaaaact acacggcaat
     2101 cggcggcagc ctgtatctga ctgccgccgc cgcactctta cccatcgtct ttttctttgc
     2161 cgcgctgacc gtcctgaagc tgaaaggcta tcaggcgggg ctttatacgc tgctgattgc
     2221 gcttgccgtt gccgtattcg gcttcgggat gccggcggta tggcggtttc ttccctgccg
     2281 cagcagccgc actgacccaa cgcccctacg ccacgctgga tttgaccgcg cattacaaaa
     2341 tcggcaaatc cacccgcatc ggtttggact ttgaaaacgt gttcaacaaa cgctaccgcc
     2401 ctatgcccga cattcacgtt tacggcacgc cgcgcagcct gaccgcaacc gtcaaacata
     2461 ta
//
LOCUS       DBBZYD010000150         2265 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.150, whole genome shotgun sequence.
ACCESSION   DBBZYD010000150 DBBZYD010000000
VERSION     DBBZYD010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.150"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(441..725)
                     /locus_tag="ACJJDL_001988"
     CDS             complement(441..725)
                     /locus_tag="ACJJDL_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7574634.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMLVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII"
     gene            complement(1100..>2265)
                     /gene="pilC"
                     /locus_tag="ACJJDL_001989"
     CDS             complement(1100..>2265)
                     /gene="pilC"
                     /locus_tag="ACJJDL_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7574635.1"
                     /translation="VELGYTVGTPQIGKTHNGKYAAFLASGYATKEITSGENKTALYV
                     YDLENNNGTPIAKIEVPNGKGGLSSPTLVDKDLDGTIDIAYAGDRGGKMYRFDLSSQS
                     PDQWTVRPIFEGTKPITSAPAISQLKDKRVVIFGTGSDLSEDDVDKMDEQYIYGIFDD
                     DTETTGNVKVDLKGLGGGLLEQHLTQEDKTLFLTDYKRSDGSGNKGWVVKLKDGQRVT
                     VKPTVVLRTAFVTIHKYTGNDKCGAETAILGINTADGGKLTKKSARPIVPDANTKVAQ
                     YSGDKKTSSGKSIPIGCMQKGNEIVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAG
                     GSGIDPAGKRSGKNNRCFSQKGVRTLLMNDLDSLDITGPTCGMKRISWREVFF"
BASE COUNT          541 a          590 c          497 g          637 t
ORIGIN      
        1 caccacgtca ttcccacgaa cctacatccc gtcattccca cgaaagtggg aatccaaaat
       61 ctcggacttt cagataatct ttgaatatta ctgttgttct aaggtctaga ttcccgcctg
      121 cgcgggaatg acggcggagc ggttgctgtt ttttccgata aatgccgcaa tctcaaatcc
      181 cgtcattccc acgaaagtgg gaatctagaa tctctaaagc ttcagctaac ctttgaatat
      241 tactgttgtt ctaaggtctg gattcccgcc tgcgcgggaa tgacgggtct tttataatct
      301 ttgaatatta ctgttgttct aaggtctaga ttcccgcctg cgcgggaatg acggtttaga
      361 agttgcccga aacctcaaaa aaaaaaaaaa aaaaaccgaa accgaacaag ccggattccc
      421 gcctgcgcgg gaatgacggg ctaaataata tcaaaccata aatcctgcca agaaacatta
      481 ttttcttcaa tcagttgcaa tttccaagcc ctgttccatt tcttcaactg tttttcccga
      541 gtaattgcac tctccatcgt aggatgcagt tcataccaaa ccagcatagt aacgttgtac
      601 cgtgatgtaa atccctcaat caaatgctcc ctatgttggt aaatacgttg caccaaatca
      661 gatgtaacgc caatgtataa cgtgccatta cgttggcttg ctaaaatata aaccgcaggc
      721 tgcatataat acccttttga attatttcaa tttatattcc cgcgaacacc atcccgtgat
      781 tactttaacc cttcgttatt cccatagctt tccatcattc ccgcaactct tcgtcattcc
      841 cacgaaagtg ggaatccaga atctctaaag cttcagctaa cctttgaata ttactgttat
      901 cccaaggtct agattcccgc ctgcgcggga atgacggcat cggtttgacg gtatttaatt
      961 gaattgtgga aattgatgga ttcagtgaga ttggcgagat gaagcctacc ctatagcccg
     1021 ccttttacga acccgcccct cccgaaaaac gcaaaaaatg ccgtccgaaa acctttcgga
     1081 cggcattttc gcgtgcaaat cagaagaaga cttcacgcca gctgattcgt ttcataccgc
     1141 acgtcgggcc ggtaatgtcc aagctgtcca aatcgttcat cagcagggtg cgcacccctt
     1201 tttgggagaa gcagcggttg tttttgccgg aacgcttgcc ggcggggtct ataccgctgc
     1261 cgcccgcatc gccgtctgcc gttgttgaaa atccgtctgt tttcttttca tccagataac
     1321 gcacattaac cggtttgtcg taaacatatc cgttcgggca gacgatttca ttgccttttt
     1381 gcatacaacc tatagggatg gatttgccgc tggaagtttt cttatcgccg gaatattgcg
     1441 cgaccttcgt attggcgtcc ggcacaatcg ggcgcgcgct tttcttggtc agcttgccgc
     1501 cgtcggcggt attgatgccc aaaatggcgg tttccgcgcc gcatttgtca ttacccgtat
     1561 atttatggat ggttacaaag gcggtacgca ataccacggt cggtttgacg gtaacgcgct
     1621 gtccgtcctt caatttcact acccagccct tattgcccga gccgtcggat cgcttataat
     1681 cggtcaggaa taaggtttta tcttcctgag taaggtgttg ctcgagcagc ccgcctccca
     1741 aacctttaag gtctaccttt acattacccg tcgtctccgt atcgtcgtcg aagataccgt
     1801 aaatatattg ttcgtccatt ttatcaacat catcctcact caaatcgctg cccgtgccga
     1861 agatgaccac gcgtttgtct ttcagttggg aaatggcggg cgcggaagta atcggttttg
     1921 tgccttcaaa aatagggcgt acagtccatt gatcaggact ttgactgctc aaatcaaagc
     1981 ggtacatttt cccgccgcga tcgccggcat aggcgatatc gattgtgccg tccaaatctt
     2041 tatccaccag cgtgggggac gaaagcccgc ccttgccgtt gggtacttcg atttttgcaa
     2101 tcggcgtacc gttgttgttt tccaaatcat acacatacag cgcggtttta ttctcgccgc
     2161 tggtaatttc tttagtcgca taaccggagg cgaggaaagc ggcgtatttg ccgttgtggg
     2221 ttttgccgat ttgcggcgtg ccgacggtgt agcctaattc cacgc
//
LOCUS       DBBZYD010000151         2216 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.151, whole genome shotgun sequence.
ACCESSION   DBBZYD010000151 DBBZYD010000000
VERSION     DBBZYD010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.151"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            136..2016
                     /locus_tag="ACJJDL_001990"
     CDS             136..2016
                     /locus_tag="ACJJDL_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HGG7574636.1"
                     /translation="MNIFYEESGQFKIAAIVQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLALPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLDNGTKRVGIHIAAPS
                     LAIKQGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSG
                     FNAGEPTCKIEAVNIAKNLRIQAIEPHFNAETGLDEAGEMMFVHHQDLIWFHQFAVAL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVRHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          601 a          671 c          523 g          421 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataacgc aagcaccgca aagacgcgcc aaccctctcc
       61 caaccttttt tcagacggca ttttcggtaa tctgctaaaa tcgcccgctt gagtttccac
      121 agaaaaatcc gaaaaatgaa tattttttac gaagagtccg gccaattcaa aatcgccgcc
      181 atcgtccaaa aaaacgacgc cacctaccaa gtcgataccc cacacggcaa acgcaccaaa
      241 gtgaaggcga acaacgtctt tgccgagttt gacggcgata tggcggcgtt tttggaaaac
      301 gcgcaggcac aggcggcgga catcgacacc gatttattgt gggaagtatg cggcgaagag
      361 gaatttaccg ccgaagccat cgccgaagaa tattacggcc atgcgccgac caaaaccgag
      421 ctggcggcaa ctttgattgc gctttacgcc gcgccgatgt atttctacaa aaaagccaaa
      481 ggcgtgttca aagccgcgcc cgaagaaact ttaaaacaag cacttgccgc catcgaacgc
      541 aaaaaacagc aagacgcgca aatcgacgct tgggcggaag ccttgaaacg cggcgagatg
      601 ccgtctgaaa tcgcggcgga tttgaaaacc atcctgcacg cgcccgacaa gcagtcgctg
      661 acctacaaag cctttaccaa agccgccgac gcgctgaaaa cctctgccta cgaattggcg
      721 aaaaaaacgg gcggcattac gtccattccc caatacctgc aagacggatt tgaaatcaaa
      781 tacttcccca aaggaacagg cttccccgac cttgcccttc ctgaaatgcc cgacctgccc
      841 aaggctgacg ttaccgcctt ttccattgac gacgaatcga ccaccgaagt ggacgacgct
      901 ttaagcctga ccgacttgga caacggcacg aagcgcgtcg gcatccacat cgccgcgccg
      961 tcgcttgcca ttaaacaagg cgacaaaatg gaaaaaaaca tcatggaacg cttgagcacg
     1021 gtttatttcc ccggcggcaa aatcacgatg ctgcccgaaa actggatagc cgcgttcagc
     1081 cttgatgcag gcgcgtaccg tcctgccgtc agcatttatt ttgatgtgga cagcgggttc
     1141 aacgccggcg aaccgacctg caaaatcgaa gcggtcaaca tcgccaaaaa cctgcgcatc
     1201 caagccatcg agccgcattt caacgccgaa accggcttgg acgaagcagg cgaaatgatg
     1261 ttcgtccacc atcaagacct gatttggttc caccaatttg ccgtcgccct gcaaaaagca
     1321 cgcggcaaat acgagcccaa ccgtgcgccg caatacgatt acagcatcga attggataaa
     1381 gaagacaacg tatccgtcgt ccgccgcgaa cgcggttcgc ccatcgatac gctggtcagc
     1441 gagatgatga ttcttgccaa cagcacttgg gcgcaaatgc tccatgacaa cgacctgccc
     1501 ggcctcttcc gcgtccaacc caccggaaaa gtacgcatga gcaccaaatc cgagccgcat
     1561 atcggcatgg gcgtgcggca ttacggctgg tttacctcgc cgctgcgccg cgccgccgac
     1621 tacatcaacc aaaagcagct gatcagcctg atagacgaca ctgccgagcc gctgtatcaa
     1681 aacagcgatg ccgagctttt cgccgcactg cgcgactttg atgccgccta taccgcctac
     1741 gccgacttcc aacgccaaat ggaagcctac tggagcctgg tttacctgca acagcaaggc
     1801 acgagcgagc tgacggcgac gattctgaaa gaagacctcg tccgcatcga aggtctgccg
     1861 ctagtaacac gcgcgaccgg tattccgttt gacgcgctgc ccaaatcgca ggcattgttc
     1921 aaaatcaccg aattagatgc cgagaagcag tttgtctcgc tcaactacat caaggcagtc
     1981 gcacccgcgg gtacaacggc aggcaatgcc gtctgaagcc cgatacggca aactccggca
     2041 aaaacagaaa cctgaatctc atcattccca cagtcgggaa tccggttttt tgggtttccg
     2101 ttgtttttcc gtttcaatga acttccaagc cgccgttccc gataaatacc cgcaatctaa
     2161 aatcccgtca ttcccacgca gatgggaatc taggtttatc cgcacagaaa ctgata
//
LOCUS       DBBZYD010000152         2130 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.152, whole genome shotgun sequence.
ACCESSION   DBBZYD010000152 DBBZYD010000000
VERSION     DBBZYD010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.152"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            752..2056
                     /locus_tag="ACJJDL_001991"
     CDS             752..2056
                     /locus_tag="ACJJDL_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HGG7574637.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          464 a          519 c          610 g          537 t
ORIGIN      
        1 accgtcgggc atctgcagcc gtcattcccg cgcaggcggg aatctagacc ttagaacaac
       61 agcaatattc aaagattatc tgaaagtccg agattctaga ttcccgcttt cgcgggaatg
      121 acgaaaggtt gcgggaatga cgaaaagtgg tgggaatgac gaaaagtgat gggaatgacg
      181 gttcgggcat tccttaaatt acccgtgtat cgctgtaaat cttagagatg gcggaatata
      241 gcggattaac aaaaaccagt acggcgttgc ctcgccttag ctcaaagaga acgattctct
      301 aaggtgctga agcaccaagt gaatcggttc cgtactattt gtactgtctg cggcttcgtc
      361 gccttgtcct gatttttgtt aatccactat atttccaatt aaaaattttt aatatattaa
      421 tcaataaatt aattttataa aataaaaata ttgtcaacaa tattttgcct tatcgcccaa
      481 acctctgtat attttcctac agtaaattgt tgacaatcca tacgcccaca tatgcgccgc
      541 ctaaggataa atcctcccgc cggacaacgg gtgcaaggga ttggatgcga tatttccata
      601 ttcaaacaag ggatttgttt cacgcacagg gcggcacatc ggcaaaatcc ccgcgccgcc
      661 ccggtccggc agggcttgcg tccctcccgg acaagccccg accccgcctt tccgaaagac
      721 gggctcaacc attaaggaaa ctttaatcaa aatgaaaaaa cacatatggg cggcatcttt
      781 gctgccggca tccctatcgg cagaaccttt aaactggtgg aagccttatt ccgccgtcaa
      841 ttcgggcgat accgcctggg tgatgactgc ggctgccttg gtactgttga tgacgcttcc
      901 cgggctggct ttattctacg gcggtatggt gcggaaaaaa aacctgctct cgacgatgat
      961 gcacagcttt tccatcgcga cattggtggg aatcctttgg gtcgccgtcg gctattcttt
     1021 agcgttcacg ccgggaaatg cctttatcgg cggtttgggg cgcgtatttt taagcgggat
     1081 gcagatagac gctgccgcac agatgctgac cgtgtcgccc aatgcgccga ctgttcccga
     1141 accggtattt atgttttttc agatgacgtt tgccattatt tcgaccgcca ttattaccgg
     1201 cgcgtttgcc gaacggatga aatattcggc aatgatgctg ttttcgggca tatggttttt
     1261 attggtttat gtgccgggcg cgcattgggt ctggggcggc ggctttatga gcaagggcgg
     1321 cgtattggat tatgccggcg gtacggtggt gcacatcaat gccggtatcg cgggactcgt
     1381 cgccgccttg gttttgggca ggcgcatagg ctacgggcgc gaggcgatgc ctccgcacaa
     1441 tatggcgatg acactgatcg gcgcggcaat gttgtggttc ggctggttcg gctttaacgc
     1501 cggatcggcg cttgcggcag acgcggcggc gggtatggcg atggcggtaa cgcaggtgtc
     1561 ggccgtattc ggcgcggcag gctggcttgc ctgcgaaaaa atagcgggac acaaaccttc
     1621 cgctttgggg ctggcttccg gcgcggtttc cggtctggtc ggcatcaccc ctgccgccgg
     1681 ctttaccggc ccgtctggag cggccgccat cggtatattg actgccgccg cgtgctttgt
     1741 gtccgtcacc gtcgtcaaac acaaattgcg ttacgatgat tctttggacg ctttcggcat
     1801 acacggattc ggcgggctgg tgggcggaat attgaccggc atctttttcg acaaccgcat
     1861 tttcggcggg gatgcggcag tttggcagca gttgtggata caggtaaaag acgggttcgt
     1921 tatggcggca tacagcgggc tgatgagttg ggcgattttg aaggtcgtgg ggaaaatctg
     1981 cggcggcctg cgcgtcggca aggatgtcga acgcgaaggt ttggatctga atatccacgg
     2041 agaacgcgtg gaataagggc ggctatgccg tctgaagcct gaaaatcggg tttcagacgg
     2101 catttttcac gtttgccgcc gatggataaa
//
LOCUS       DBBZYD010000153         2074 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.153, whole genome shotgun sequence.
ACCESSION   DBBZYD010000153 DBBZYD010000000
VERSION     DBBZYD010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.153"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(5..1900)
                     /gene="mnmG"
                     /locus_tag="ACJJDL_001992"
     CDS             complement(5..1900)
                     /gene="mnmG"
                     /locus_tag="ACJJDL_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HGG7574638.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
BASE COUNT          343 a          531 c          651 g          549 t
ORIGIN      
        1 gtgtttattt cgcgtcttta aacccgcgct tcaaatgcac catcagcaat gccactgccg
       61 caggggttac gccggaaatg cggcttgcct gcccgacggt ttcgggtttg tgctggttga
      121 gcttttgctg cacttctgcc gacaaacctt taactttgct gtaatcgata tcctcgggca
      181 gctttaaggt ttcgatgtcg cggcggctgt cgatttcttc gttttggcgg tcgatatagc
      241 cttggtattt gacttggatt tcgacttgtt cgaccacttc ggcggagagg cgttcagacg
      301 gcatcgcgcc ttcgagcgtc atcagcgcgg cgtagtcgag gttcgggcgg cgcaggaggt
      361 cgtgcaggtt ggcttcgcgg ctgagctttt gcccgaatac gcggatttgt tcgtcttcgg
      421 cgagtttttg cggcgtgtac cacgttgttt tcaaacgttg gatttcgcgt tcgatggctt
      481 cgcgtttttc gttgaacatg cgccattgcg cttcacccac caagccgatt ttgtagccgt
      541 cttcggtcag gcgcatatcg gcgttgtctt ccctgagttg caggcggtat tcggcacggc
      601 tggtgaacat tcggtagggt tcgttcacgc ctttggtgat gaggtcgtcc accaatacgc
      661 cgagataggc ttgttcgcgg cgcagcagga gcgggtcttg ttcgcggacg tattgcacgg
      721 cgttcgcgcc tgccagcagt ccttgcgcgg cggcttcttc ataacctgtc gtaccgttga
      781 tttgcccggc gaaaaacaat ccggcaatgg ttttggtttc gaggcttgct ttgaggttgc
      841 gcggatcgaa gtagtcgtat tcgatggcgt agccggggcg caggatatgg gcgttttcca
      901 aacctttcat actgcggacg agcgcgattt ggatgtcgaa cggcaggctg gtggagatac
      961 cgttggggta gtattcgtgc gtagtcaggc cttcgggttc taggaaaatc tggtggctgt
     1021 ctttgtcggc gaagcggttg attttgtctt cgatagacgg acaataacgc gggcccacgc
     1081 cttcgatttt gccggtaaac atcgggctgc ggtcgaagcc tgagcggatg atgtcgtggg
     1141 tttgcgtgtt ggtatgcgta atccagcagg acacttggcg cgggtgcatt tcggcgttgc
     1201 cgcgtacgga catgacggga acgggcgtgt cgccgggctg ttcggtcagt tgggagaagt
     1261 caatcgtgcg tccgtcgatg cgcggcggcg tgccggtttt cagacggcct tgcggcaggt
     1321 tcaattcgcg caaacgtccg cccagcgatt tggcggcggg gtcgccggcg cgtccgccct
     1381 cgtagttttc caaaccgatg tggattttgc cggacaaaaa cgtgcctgcg gtcaacacca
     1441 cggcgcgtgc tttaaactcc acgcccatcg cggtgattac gcctgaaatg cggtcgccat
     1501 cgagcgttac gtcttcgacg gcttgttgga aaaggtcgag gttttcttgg ttttccaaca
     1561 tttcgcggat ggcggcttta tataggatac gatccgcctg cgcgcgcgtg gcccgtactg
     1621 ccgcgccttt gctggcgttc agacggcgga actggatgcc ggatttgtcg gttgccaacg
     1681 ccatcgcgcc gccgagcgcg tcgagttcgc gcaccaaatg ccctttgccg atgccgccga
     1741 tggaagggtt gcacgacatt tgtccgagcg tttcaatatt gtgtgtgagc aaaagcgtct
     1801 gcgcgcccat acgggcggcg gcgagcgcgg cttctgtgcc ggcgtgtccg ccgccgacga
     1861 cgataacgtc gtaggttttg gggtaaatca tgtgggtcat gtgtgtattg cctgacggtg
     1921 tttcagacgg catttatagt ggattaacaa aaaccagtac agcgttgcct cgccttagct
     1981 caaagagaac gattctctaa ggtgctgaag taccaagtga atcggttctg tactatctgt
     2041 actgtctgcg gcttcgccgc cttgtcccga tttt
//
LOCUS       DBBZYD010000154         1881 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.154, whole genome shotgun sequence.
ACCESSION   DBBZYD010000154 DBBZYD010000000
VERSION     DBBZYD010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.154"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(1..1370)
                     /gene="pilC"
                     /locus_tag="ACJJDL_001993"
                     /pseudo
     CDS             complement(1..1370)
                     /gene="pilC"
                     /locus_tag="ACJJDL_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582253.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
BASE COUNT          393 a          489 c          496 g          503 t
ORIGIN      
        1 tggcatcagg catgaagctc ccttcactaa caatgccgaa agtgtcgttg ccgttgtttc
       61 ccttaaaacc ttcgacctca ttgcctttaa gtttgatctg atgtacgcct ttatccaatc
      121 ggatgacggt ttgccgccct gtgaaagtcg gctctcgact ttcaatatcc gacttattca
      181 aggttgcgag ggaatagcgg ccgggtctgc cggggtcgtc ttttcttttc agattttgaa
      241 ggtagatgcg gctgctcgaa ctgtcggggt aggtggaaac cgaagcggaa tacatctgca
      301 ccttaccatt ttgcacaggt ccgaaccaca gcgcgggggc agtcagggcg ggggaagggg
      361 ctttggtact cttattgggg ttatttgcgt tgacgcagcg gcctgctttg acttgctgca
      421 ggccgagctt gactggaatc tgcccggtat ctttaatgtc ccaactagcc caaaaagata
      481 gaatgccgcc aaaccccgtc ctttgtgtct tcacatcgat gctcggcttc aagacaccca
      541 actgcactgt tttgtcggtg atattttgaa tctgtttttt attcagcagg tgcagcttgg
      601 cgttcagata atagaccacg gcggtatgtt cgcgctgccc gtcgccaagg gaaatagggt
      661 ggctttctgt cgtagagacg atggtttgat tattattgtt ttcactaaaa gaagatatca
      721 atctgttgga tgattggcta tttttgacgg tattctcgct gcccaaattg aaagatacgc
      781 ccaaccatgg ataatctttc aatttgtaaa tgggcgaatt ttcgcggctt gggtccgggt
      841 gactatccag catgcccgca ttttttgcca aaccggtgtt gtcgaaggaa aatcgggttt
      901 tatagacaag ttggggacag cctgtgctgt ttctgcatac gacaccggcg tagctgtagc
      961 ctatcaaccc tgggtgggtc gtatgaatcc aattaacggc attgccgcgc tctttcagcc
     1021 ttttgtcatc aaaaccggaa accttgccgt agggcggcag gtaggtggct gtgccaaaaa
     1081 cggcagtacc gttttgtcga gaaacaagct catcgctatt gttgaatgag acagagcctc
     1141 cacccccgtt gttcgcatta aagtcaaatt tgcgtttcct gtctttttcc cttaaggttg
     1201 aatatgaacc ctcccgcttt acctccggct gattttgttt gttcatgaca atagcgtagt
     1261 tacgggtttc cgcctgcgcg cgcccccccc ccgccggtat gggaaaacat caagatggcg
     1321 gcataaagcg cggtatggcg gaaaacctgc ctttttaaag ttttattcat cgtatttcct
     1381 tttcggtcaa accccccgcc cttcgggcat ccgtccttcg gggcggcagg atcaggcttt
     1441 gtccgggagg ggtgcaagcc cttccgaatc agggcggcgc cttatgtgcc gccctgcgtg
     1501 ttggaacata ttttatccct taaatcttgc ttcgcgggat accgtcggcg gcaggcgcgc
     1561 cgcaaacggc gggattcggc aaaccgcccg attccgcgcc cgccgaattg ctggttggaa
     1621 aacccctttg gcccggctgc caaaggggga tgttcggaaa agtaacacgc ccctttggcc
     1681 ggatgcaatg tatagggtta ccgcattatt ctacccttgc gcgctgatca tggtaaagcg
     1741 gttttcggca atccgcaacc gcctccttgg cccgccattg ccgcgaaagc gggaatccgg
     1801 aacgtaaaat ctcaaaaaaa ccgttttatc cggcaagttt gcccgccggc aggcccgcca
     1861 ttgccgcctg cgcggcaatg g
//
LOCUS       DBBZYD010000155         1861 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.155, whole genome shotgun sequence.
ACCESSION   DBBZYD010000155 DBBZYD010000000
VERSION     DBBZYD010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.155"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(195..1361)
                     /locus_tag="ACJJDL_001994"
     CDS             complement(195..1361)
                     /locus_tag="ACJJDL_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HGG7574639.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQLQLTEPL
                     PNIQPQVTKRKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGGASQWG
                     NRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDMSVSVR
                     YDSPEFSGFSGSVQFVPAQNSKSAYTPAHFVQNKQNKQNQPPTLVPAVVGKPGSDVYY
                     AGLNYKNGGFAGNYAFKYAKHANVGRDAFELFLLGSGSDEAKGTDPLKNHQVHRLTGG
                     YEEGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERGK
                     KGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          469 a          471 c          445 g          476 t
ORIGIN      
        1 tatatgtgca aaccaagccg aaaatgcgaa ataccgtctg aaaatctttc agacggtatt
       61 tgctgtcttt attgccgttt ttcttccgta tccggatttt tgtttggggc tgaagcagat
      121 tggcagtcag attgcaatca aagaatgaag gcgagccgtc aaaaacaaag ctatccgctt
      181 caccgccccg atatttagaa tttgtggcgc aaaccgacgg aggcggcatt aatttgagtg
      241 tagttgccga tgccggtatt gcgtttcagc caagcgccag acacgatggc ggaagtgcgt
      301 ttggaaaaat cataatcaac gccggcgatg atttgatcgt agctggtatt ttcgcctttt
      361 ttaccgcgtt cgataaagtc gaaaccatgg gcatagctga tgcgtggaac tgcattaccg
      421 aagcggtagg aagcagtggc ggcaatttcg gtcgtactgt ttttggtttt gtcggcattt
      481 tcagacaaat ccaactgagc cgccaaggcg agattcaagc cgccttcctc atagccgccc
      541 gtcaggcggt gtacctgatg gtttttcaag ggatcggtac ctttggcttc atcactcccg
      601 ctgccgagca agaacaactc aaaagcatca cggcccacat tggcgtgttt cgcgtattta
      661 aaggcatagt tcccggcaaa accgccattt ttgtaattca gaccggcata atacacatcc
      721 gaccccggct tgccgacaac agccggaacg agagtaggcg gctgattttg cttattttgc
      781 ttattctgaa caaaatgagc cggcgtatag gcggacttgc tgttttgggc cggaacgaat
      841 tggacgctgc cgctaaaacc ggaaaattcg ggggaatcgt agcgtacgga aaccgacata
      901 tcgtcgtggc gtttgaaaat acccaattgc gaagccacat cattgttgct gtcccaagga
      961 tcaatggctt ggctggcatc gtcaaactga ttcgcaacgc gaccggcgcg cagcgtgccg
     1021 aattcgcctg ccaagccgat aaaggattcc ctgttgcccc actgggacgc gccgccgccg
     1081 gcaacggata cgtcttgctc aagctgccaa acagccttca gcccttcgcc caaatcctca
     1141 ctccccttaa agccgataaa cgagccgaaa tcgctgattt tcgtcctgat gcggcttttg
     1201 cgcttagtaa cctgaggttg aatatttggg agcggttcgg tcaactgcag ctggatgttc
     1261 ctgccttcca cgccggcttt gatttcgccg tacaggctga catcggcaac ggccgcaagc
     1321 ggcagtgcgg acaatacgag ggcggtaagt ttttttcgca tatcggcttc cttttgtaaa
     1381 tttgataaaa acctaaaaac atcgggcaaa cacccgatat gtcatcaatt ataccccccc
     1441 ccccgcaaaa aaccattttt cagaacaaat atctgataaa tgccgcaacc tttattttaa
     1501 aaatgattat attttgatat aaaacaatag cttatttttc aaaaaacgtt gtgtttctac
     1561 aacacaattc aagcgcagac ctcgtgcggg ccgatgcgct gctgcccgga tgcagtctcg
     1621 gctttttaaa acgccataaa aaaacacacg cggcacttta tagtggatta acaaaaacaa
     1681 gtacggcgtt gcctcgcctt agctcaaaga gaacgattct ctaaggtgct gaagcaccaa
     1741 gtgaatcggt tccgtactat ttgtactgtc tgcggcttcg tcgtcttgtc ctgatttttg
     1801 ttaatccgct ataaagaccg tcgggcatct gcagccgtca ttcccgcgta ggcgggaatc
     1861 t
//
LOCUS       DBBZYD010000156         1792 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.156, whole genome shotgun sequence.
ACCESSION   DBBZYD010000156 DBBZYD010000000
VERSION     DBBZYD010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.156"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..1417)
                     /gene="pilC"
                     /locus_tag="ACJJDL_001995"
     CDS             complement(<1..1417)
                     /gene="pilC"
                     /locus_tag="ACJJDL_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7574640.1"
                     /translation="MNKTWKRQVFRHTALYTAILMFSHTGGGGGQAQAQTQTHKYAIV
                     MNNQKLPEVKWGNDYSSLTDKSNEREVTHTSKFVVAKKHISFSFNNTDEVVAEKKDAV
                     VFGAATYLPPYGKVSGFDTAKLAERKNALDQIGTTHPGLIGYNYQDVTCASGNCPELS
                     YRTQFTFNNGLKRNGNGGRLDIYEDKSRDSSPIYKLKDYPWLGVSFNLGGESSFKPKR
                     QGSLVSSFSEDVTQQNGTQDQYKSKNLVYTTDDYNSKGNKNHQDKHHAVAFYLNAKLH
                     LLDKKQIKNIAQGVTVDLGTLKTRIEPTDAWKNRQGSYFNNGTWTYEEKGSVSVKLKL
                     PEVKAGRCITTPNPNPKSKAPSPALTAPALWFGAGQDGKAEMYSASVSTYPDSSSSRI
                     YLQNLKRKTDSNRPGRYSLADLSASDIQSKEPTFTSRQTIIRLDGGVRHIQLDRNNEV
                     TSFNGDNGTFGIVNEGSVVPES"
     gene            1382..1540
                     /locus_tag="ACJJDL_001996"
     CDS             1382..1540
                     /locus_tag="ACJJDL_001996"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574641.1"
                     /translation="MAENLPFPSFIHLLFLEFAFTGRGGAPRTPGFGKPPDSAPAELL
                     IEKLTSPF"
BASE COUNT          408 a          444 c          421 g          519 t
ORIGIN      
        1 tgctttcagg aacgacgctc ccttcattaa caatgccgaa agttccgttg tcgccattaa
       61 aactagtgac ctcattgttt ctatccagtt ggatatgccg tacgccacca tccaagcgga
      121 tgattgtttg ccgacttgtg aaagtcggct ctttactttg aatatccgac gcactcaagt
      181 ctgcgaggga atagcggccg ggtctgttgg agtcggtttt tcttttcaga ttttgaaggt
      241 agatgcggct gctcgaactg tcggggtagg tggaaaccga agcggaatac atctccgcct
      301 taccatcttg cccagctccg aaccacagcg cgggggcggt cagtgccggc gaaggggctt
      361 tggatttggg attggggttc ggtgtggtga tgcagcggcc tgctttgact tccggcaatt
      421 tgagtttgac gctgactgat cctttctctt catacgtcca agtaccatta ttaaaatagc
      481 tcccctgcct gtttttccac gcgtccgtcg gctcgatgcg tgttttcaag gtacccaaat
      541 caactgttac gccttgcgcg atatttttga tttgtttttt atccagcaaa tgcagcttgg
      601 cgttcagata aaaggcgacg gcgtggtgtt tgtcctgatg gtttttatta cccttactat
      661 tgtaatcgtc tgtcgtataa acgaggtttt tgcttttgta ttggtcttgt gtaccatttt
      721 gctgcgtcac atcctcgcta aaagaagata ccaaagaacc ttgtctcttt ggtttgaagg
      781 agctctcgcc gcccaaattg aaagacacgc ccaaccaagg ataatccttc aatttgtaaa
      841 tgggcgaact gtcgcggctt ttgtcttcgt atatatccag cctgccgccg tttccatttc
      901 ttttcaaccc gttattgaag gtaaattggg ttctatagct aagttcagga cagtttccgc
      961 tggcgcaagt gacatcttgg tagttgtagc ctatcaaccc agggtgggtc gtaccaatct
     1021 gatcaagggc atttttgcgc tcggccagct tagcggtatc aaaaccggaa accttgccgt
     1081 agggcggcag ataagtcgcc gcgccgaaaa cgacagcatc ttttttttca gcaacaactt
     1141 catcggtatt attgaatgag aaactaatgt gcttttttgc tacaacaaat ttactcgtat
     1201 gggtaacttc gcgttcattg cttttgtccg tcaatgagct atagtcgttc ccccacttta
     1261 cctcaggcag cttttgattg ttcattacaa tagcgtattt atgcgtttgc gtttgcgctt
     1321 gcgcctgccc cccccccccg ccggtatggg aaaacatcaa tatggcggta taaagcgcgg
     1381 tatggcggaa aacctgccgt ttccaagttt tattcatctt ttattccttg agtttgcctt
     1441 cacgggacgg ggcggcgcgc cgcgaacgcc ggggttcggt aaaccgcccg attccgcgcc
     1501 cgccgaattg ctgattgaaa agcttacttc cccattttaa ctttgcacac tgatcacggt
     1561 aaagcgtttt ttagcaaacc gctgcagatg cccaacggtc tggattcccg cctgcgcggg
     1621 aatgacggtt tagaagttgc ccgaaacctc aaaaaaaacc gaaaccgaac aagccggatt
     1681 cccgcctgcg cgggaatgac ggcggagcgg tttctgtttt ttccgataaa ttcctaaaac
     1741 tcaaaatttc atcattccta caaaaacaga aaaccaaaat cagaaaccta aa
//
LOCUS       DBBZYD010000157         1791 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.157, whole genome shotgun sequence.
ACCESSION   DBBZYD010000157 DBBZYD010000000
VERSION     DBBZYD010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.157"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(148..804)
                     /locus_tag="ACJJDL_001997"
     CDS             complement(148..804)
                     /locus_tag="ACJJDL_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HGG7574642.1"
                     /translation="MKNKSKVWDLPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIRDYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQIGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFNLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALAAAAILLLS
                     "
     gene            869..1759
                     /locus_tag="ACJJDL_001998"
     CDS             869..1759
                     /locus_tag="ACJJDL_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HGG7574643.1"
                     /translation="MFPVFHLSGESRRRMLQAALRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLTKRQG
                     INAWVVGCGLGTDKAAVGTLAGILTEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIRAIFGATVVLKGHKTLVASPDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
BASE COUNT          406 a          425 c          583 g          377 t
ORIGIN      
        1 ccttgtcctg atttttgtta atccactata aaacggtttg ggacggaaaa acggcctgaa
       61 gccgtttcgg gcattcagac cgtttgcgcg gagaggggat gccgtccgaa gggcgaaaag
      121 ggcttcagac ggcattgatg tcgggtttca ggacaggagc aggatggcgg ctgcggcaag
      181 cgcggcaacc gataatgcgg cggcaagcgc ggttttaccg gcaaagcgga ttgaggtttt
      241 gccttcgatg tatttgaagc cggttatcat cgggaggacg aggtttttct ttttgaacac
      301 gcggtatgcg gcgacggcgg cgatatgaat ggcggaaaaa acggcgagca ggttgaaaaa
      361 gttgaggtgg attttccgca taaggctgcc tgtatgttcg gaaaccaaat ggttgaggta
      421 gccgttggtg ctgaaggtgt tttcatcggc ggcaaaaagc cccgtgccga tttgaaatga
      481 gacggcggcc aaaagcgcga cgaccatcag tgcgcccaag gggttgtgtc cgggctggat
      541 atgttcggga ataccgtttt tcagataatc cctgataccc gaccatccgc ggacgaaacg
      601 ggagaaacgg gcggtatcgc tgccccaaat gccccagcag aggcggaata cgagcaggaa
      661 aaggataaac agcccgacgc gcgtgtgcca ttgaagcata tcgccgccgg cttttgcgct
      721 ataccacata aagggcaagg acgcggcaag cagccagtgg aaaaggcggg tggggaggtc
      781 ccagactttg cttttgtttt tcataatcgg tttccggcgg tagaatcggt ttgttttcga
      841 gccttaattt taaccgattg gaggggaaat gtttcccgtt ttccatcttt caggcgaaag
      901 ccgccgccgg atgcttcagg cggcattgcg ttttccctat gttttcaaag cccgtgcgga
      961 agattcgcac aaagggactt tcggcacgct cgccgtagtc ggcggatcgg cagggatgag
     1021 cggtgcgccc gtattggcgg catcggcggc gatgtatctc ggctgcggca aggtgtgggc
     1081 gggtttcaat caggatgcgc ttccgtttgc cgtcattgcc ggtttccccg aaattatgtt
     1141 ggacacggca gacggtttga ccaagcgtca aggcataaac gcctgggttg tcggttgcgg
     1201 cttgggtacg gataaggcgg cggtcggaac gcttgccgga attttgacgg aacacacgga
     1261 caagcccgtc cttttggatg cggacgcgct gaacatatta tcaaccgatg ccgaaacccg
     1321 aaatctggca cgcgggtgta aaaacctgat tttaacgcca caccccgccg aagccgcgcg
     1381 cctgcttgga acgacggttg cacaggttca ggcggatcgg acggcggcag tgaggaagat
     1441 aagggcaatt ttcggcgcaa ccgtggtttt aaaggggcac aaaacattgg ttgcctcacc
     1501 cgatacggaa atctatgtca acgaaagcgg caacgcggga ttggcaacgg cgggcagtgg
     1561 cgacgtattg ggcggcatca tcggcagtct gctcgcacag ggcgtgccgg tttttgaagc
     1621 cgcctgcgcg ggcgcgtggc tgcacggcgc ggcggcggat gtcataaaag aatcggcagg
     1681 cattgcggca gggctgttgg ctggcgaaat cgccccggcg gcaaggtggc tgcgcaaccg
     1741 gataactgaa agtatgtaag aagatatagt ggattaacaa aaaccagtac a
//
LOCUS       DBBZYD010000158         1756 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.158, whole genome shotgun sequence.
ACCESSION   DBBZYD010000158 DBBZYD010000000
VERSION     DBBZYD010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.158"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(42..365)
                     /locus_tag="ACJJDL_001999"
     CDS             complement(42..365)
                     /locus_tag="ACJJDL_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7574644.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IIPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(353..592)
                     /locus_tag="ACJJDL_002000"
     CDS             complement(353..592)
                     /locus_tag="ACJJDL_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HGG7574645.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(715..1512)
                     /gene="truA"
                     /locus_tag="ACJJDL_002001"
     CDS             complement(715..1512)
                     /gene="truA"
                     /locus_tag="ACJJDL_002001"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HGG7574646.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALETALAQI
                     AGEAVSTTVAGRTDTGVHATAQVVHFDTTAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIGPMRRAAALLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          387 a          415 c          513 g          441 t
ORIGIN      
        1 ttaatccact ataatgaaca caatccattc agactattca atcaggcaaa catctcctgc
       61 aatactgcaa acagtttttc agccgtactg ttgtctaaat ttccaagatg tttgaccaat
      121 ccggctttat ccacagccct aatctgttcg ggcaaaagca aaccgtcttt atcctgaaag
      181 cggacattga cgcggaacgg ggcaggacgg cttccgctcg tcatgggaat gatcagcaca
      241 gtcttgagat agttgtgtat ttcaggagga gagactacga cacaaggacg tgtctttttg
      301 atttcgcttc ctacggtcgg gtctaaggag accagataga ttccgccgcg tactaccata
      361 tccattcttt atccgcttcg ttttcaattt cggaaaaaaa atgctcctgc tcggtttcga
      421 caagcattgc ggcagcttct gcccatcccc tgcgaacggt aggacagctt aaaatgatat
      481 tgcccttttc aactgtaaca gccaagctgt ctactgcccc tatttgaccc aataatgatt
      541 tgggcagaat cacgccttgc gagtttccca ttttgcgtat gttgagaatc atatacgtac
      601 cctatttacc agtttatgta ataacaatgt tattaccttg atgaggtagt gtcaatattg
      661 aaaaagattg cctgacagtt tgtccgattt caaaatctcc gcgacaagaa tgttttaaag
      721 ccattcgggg atttgggggc ggatgatgcc gtatgcctcg ggatagtcga cgccggtcag
      781 gtaaagtccg tcgggcatga aggtcggcgg ggctttgagg cggctgcgtt cttgaatcag
      841 tgcggcgaag ccttcgacgc tgagtctgcc gctgccgaca tagacgagcg cgcccatgat
      901 gttgcgtacc atgtggtgca aaaaggcgtt gccgtgcaaa tcgaggcgga cgagtcctgc
      961 gctttgggta aggtcggcgc ggtagatggt tttgacgggg gattttgcct ggcattcggc
     1021 ggcgcggaag ctggagaagt cttgttcgcc gatcaataag gcggcagccc ggcgcatcgg
     1081 cccgatgtcg agtttgaggt gtgtccagcc tgccctgttt ttgagcaggg gggaacggac
     1141 gggggcggat tcgagcaggt agcggtaatg ccgtccgtat gcgtcgaagc gggcgtgaaa
     1201 ttcgggggcg acctgtcggg cgtgcaaaac ggcaatgcct tcgggcaggt gggcatttac
     1261 gccgcgcacc catgcctgtt ggggacgggc ggcagttgtg tcgaagtgga cgacttgggc
     1321 ggtggcatgc acgccggtgt cggtcctgcc ggcaacggtg gtggaaaccg cttcccctgc
     1381 tatttgggcg agcgcggttt ccaatgccgc ctgaacggtc ggtacgccgt cagcctgttt
     1441 ctgccagccg taaaagcggc tgccgtcata ggatagggtt attgcccagc gttgtttttg
     1501 tgcggtatcc atcggatttg ggattcggat aaatgttcag actgcattgt atcgcagatt
     1561 ttgcagggaa acggcaaatg cccggggcgc gcggcgttgt ttggggagtt gggggggggt
     1621 ggatgcagtt gctacgaatc gctatcctgt gaattcaccc tgtcaggagt gcccgaatcg
     1681 tcattcccgc gcaggcggga atctaggacg taaaatctaa agaaaccatt ttatagtgga
     1741 ttaacaaaaa ccagta
//
LOCUS       DBBZYD010000159         1739 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.159, whole genome shotgun sequence.
ACCESSION   DBBZYD010000159 DBBZYD010000000
VERSION     DBBZYD010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.159"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            177..1151
                     /locus_tag="ACJJDL_002002"
     CDS             177..1151
                     /locus_tag="ACJJDL_002002"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HGG7574647.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALCGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPAKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(1310..1528)
                     /locus_tag="ACJJDL_002003"
     CDS             complement(1310..1528)
                     /locus_tag="ACJJDL_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HGG7574648.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT          478 a          483 c          372 g          406 t
ORIGIN      
        1 aatttatcca ctataagaat aaatatcccc tcatccgcct gccgcgttcc gacttgcccc
       61 gcgccgtttt tttccactac aatcccacgc gatatctggc ggaacgcacc aaaggaacgc
      121 cccgcagcaa tctgccgcct ttcagacggc acaaacattt ccgaaacgag caaactatgg
      181 acacactgac ccgattcctc cccgaacacc tgcaacaaaa ccagctgccc gaagcactct
      241 gcggcgtttt actgtccgtt gtttccgcct gcaccgaaat caacgccaaa gtccgcctcg
      301 gcgcactggc cggcgtattg ggtatggcgg gcacgggcaa tattcagggc gaagaccaaa
      361 aaaaactgga tgttatcgcc aacaacatca tgattgacac actcaaagcc aaccctgccg
      421 ttgccggttt ggcaagcgag gaagaagact ctttcgtaag tgccggtgaa aacggacgct
      481 atctcgtcct attcgatcct ttagacggat cgtccaatat tgatgtcaac atttccgtcg
      541 gtacgatttt ctccatcctt gaaaaacccg aaggcgcatt ggcaaccgaa tcattccttc
      601 aaacgggcag acagcagctt gccgctggtt acgttcttta cgggcctcaa acccagctcg
      661 tattcacatt cggacacggc gtatatatgt tcacgctcaa tgccgaaaac gaatttgtgc
      721 tgacaaaaga aaaaccgaaa gtacccgaaa gtaccaaaga atttgccatc aatatgtcca
      781 accgccgcca ctggctgccc cccgtccaac aatacatcga cgagctcttg gcgggcgaaa
      841 ccggcacgcg cggcaaaaac tacaatatgc gctgggtagc cagcatggtt gccgaaatcc
      901 accgcatcct gatgcgcggc ggcgtgttca tgtatccgca agacaaacgc gaccccgcca
      961 agcccggcaa actgcgcctg atgtacgaag ccaaccctat gagcctgata ctcgaacagg
     1021 cgggcgcatc ggcaagcaac gcatatcaag ccatgctcga catacagccc gaaaacctgc
     1081 accaacgcgt cgccgtcatt atgggcagca gcgaagaagt ggattacctc aaccgcctgc
     1141 attcaaaata aaaggcagcc tgaccgataa agaaaggcgg cagcgcgcat ccgacgctgc
     1201 cgccgatatt tcgtttatag ccttaaaaag atagaaaacc acctttccga acggcaaaaa
     1261 tgccgtctga aaagttttca gacggcattt taaaaattaa agcccgaatt tatttgcccg
     1321 ctgctttttg caggatggcg tacaactcgt ctttcagttt caatttggct tttttcagct
     1381 catcgatggt ttccgcaccg ctggtaaccg gattgttgac cagaccggta attttatcgt
     1441 ccagctcgtt gtgttcgtcg aacagacggg cgaagcggga attttcctgt ttcaatttgg
     1501 aaatcaaatc acggtattct gggaacatat cgctttcctc tcttggttta cggttaaaaa
     1561 gtcaaattga atctttacat taattataac aaagataata tttttatcca gtgttttatc
     1621 ggatacggca aaattttctt ttaacaccgc cgtccggttg ataaaaacgt tgacaatatc
     1681 acgctttacg cataaatttt cagcctttcc tactgtatag tggattaaca aaaatcagg
//
LOCUS       DBBZYD010000160         1716 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.160, whole genome shotgun sequence.
ACCESSION   DBBZYD010000160 DBBZYD010000000
VERSION     DBBZYD010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.160"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(539..1191)
                     /locus_tag="ACJJDL_002004"
                     /pseudo
     CDS             complement(539..1191)
                     /locus_tag="ACJJDL_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          489 a          382 c          382 g          463 t
ORIGIN      
        1 gggacggcgg caatattcaa aggttgtctg aaaattcaga ggttctagat tcccactttc
       61 gtgggaatga cgggatatag gtttccctac ggacgtgttc agattcccgc tttcgcggga
      121 atgacggcgg agcgatttct gcttttccga taaatgaccg caacctaaaa cccatccttc
      181 ccgcaaaaac agaaaaacaa aaacctaaaa tcccgtcatc cccacgataa cagttgcgta
      241 attgcgtaga gtgggcttca gcccaacgtt ttttcttttt cggtcgttga ttggtgggct
      301 gaagcccacc cttgtatatc ggaactcccg tatcatagca acaaaccgcc cggccgccac
      361 ccgcgcccac ccaaggcaca caaccgttgc gtagcacagg gagcggcagg gcaacccatc
      421 gacacaaccg gacagttgcc ggacaacaca accgaatgca aggcaggttg atgatgagta
      481 cccgatacca ttacgcaggt atagtgaatt aaatctaagg ggctgtacta gattagccct
      541 aaattccaca ccaatcccgc aggattttaa gctgttgaga cggtgtgccg aagttaaatc
      601 gaaattcgca ttctttcaag aacagcggga aagatttgca atcgattccg ttgtattttc
      661 gcaagacgcg ttttgcctga ttccaaaagt tctcaatgcc gttaatgtgg ttttgacggt
      721 ctgcaaactc cttggaatgg ttgatgcggt aatggataaa accgctcacg tccaacttgt
      781 cgcagctgct cagactatcg gtataaacaa tactgtccgg catgattttc tttttgatga
      841 cagggagtaa cgtttcagac ttggcattgt ttacgacaac ggtatagacc cgtccgttgc
      901 gtttcagaat gccgaagaca accacttttc ctgccgcccg cgaccacgtc tgcctttacg
      961 ccgtccgccg aaatcgcttt cgtccggctc gacagggccc tcaaaaacct catcggcagc
     1021 caaggccaaa tgatggttga taaccgtgcg gattttacgg tagaacagtg ctgccgaatt
     1081 gggatggata cccaaaatat cggcggcaga acgggcggta atttccagcg caaaaaaacg
     1141 gagcagttct ttctgtactt ttttctttaa tttgcagtgt gttatcttca tatttcgagg
     1201 gtaacatatc tgctaatcta gtacagcccc aaaaatatac caaaaacagc aaaacaaatt
     1261 gtaaggatag gtataggctt tgtaaaggta aattgtgaaa aaagcagttt tttaaacgaa
     1321 tgaaacggct tcgggctgaa atatatgctg atgccctgtc cttcccgtat atcttgtgtg
     1381 ttgtcaaagt gcaggctgct ttgaaattgg cattacagtc gatgaaccac cattttgctt
     1441 tatttcagcg ggcttgagat gtgtataaga atattgtttt gaataaattt aaagaaaatg
     1501 ataatcgtta ttgacgattt ttaaaggaaa gcgtagagtg ccaattctat gaagcaatac
     1561 ggtaagtaac aatgaaaata tctactgctt gggtatagag catatttcac aacccgtaac
     1621 tattcttgcg gaaacagaga aaaaagtttc tcttctatct tggataaata tatttaccct
     1681 cagtttagtt aagtattgga atttatacct aagtag
//
LOCUS       DBBZYD010000161         1707 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.161, whole genome shotgun sequence.
ACCESSION   DBBZYD010000161 DBBZYD010000000
VERSION     DBBZYD010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.161"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(348..1337)
                     /gene="porB"
                     /locus_tag="ACJJDL_002005"
     CDS             complement(348..1337)
                     /gene="porB"
                     /locus_tag="ACJJDL_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HGG7574649.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSVAHNGAQA
                     ASVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFMQYGGAYKRHQNVDNVKIEKYQIHRLVSG
                     YDNDALYASVAVQQQDAKLVKDNSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFDD
                     ADYTNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGESKFVSTAGGVGLRHKF"
BASE COUNT          426 a          379 c          442 g          460 t
ORIGIN      
        1 atgtaggttc gtaggaatga cgtgatgcag gtttccgtat ggatggattc gtcattcccg
       61 cgcaggcggg aatctagaca ttcaatgcta aggcaattta tcgggaatga ctgaaactca
      121 aaaaactgga ttcccacttt cgtgggaatg acgggatgta ggttttctta accctgagtc
      181 ctagattccc gcctgcgcgg gaatgacggc atattttgac attgaataaa aaagactaaa
      241 aacaggaaaa agccaaacag aaaacagcga aacagaaaac aggaaaaagc caaacagaaa
      301 aaagcctgtc tggcgacagg ctttttgttg ataccaatct ttgcagatta gaatttgtgg
      361 cgcagaccga caccgccggc agtcgatacg aatttgcttt cgcctttgcc ttcttgcaac
      421 caaccggcag aaaccaaggc agaagtgcgt ttggagaagt cgtattccgc accgacaacc
      481 acttggtcgt aatcgttggt gtagtctgca tcatcaaacg agcctttgaa gccgtgggcg
      541 taagaaacgc ggggcgttac gttgccgaag cggtatgcca aggtagcggc aacttcggtt
      601 tgagagttgt gcgaattgtc tttaaccagt ttcgcgtctt gttgctgtac ggctacggaa
      661 gcgtacaggg catcattgtc gtaaccgctg accaaacggt gaatctggta tttctcaatc
      721 ttcacgttat ccacattctg atgtctttta taggcaccgc catattgcat gaagaagccg
      781 ccgtttttgt agttgaagcc ggcgtggtaa gattcgctgt tatgtctgcc tgcattgtcg
      841 ttaagcgcgt attgtacgct gccgctgagg ccggcaaatt cgggagaatc gtagcgtacg
      901 gaaatgaggc gtgcttcggg ttcggcaatt ttgtttacac ccaaatagtc gcttttgcta
      961 tcccaaggat tgatgtcgcc ggtgtctttc aggacgctgt tcaaacggcc gacgcgcaat
     1021 ttaccgaagc cacctttcaa accgatgaag gattggcggt tgccccaacc ggagtcagta
     1081 ccggcgatag atgccttttg ctcaacctgc caaatggctt tcagaccgtt accgaggtct
     1141 tcttggcctt tgaagccgat tttcgaaccc aaatcaacga tgccggtacc ggtttcaacg
     1201 ctagccgcct gagctccatt gtgagctacg gagcgggaag tttctacgcc ggctttgatg
     1261 gtgccgtaca gggtaacgtc agccattgct gcaacaggaa gggctgccaa agtcagggca
     1321 atcagggatt ttttcattgc tgtattcctt ttttggttaa gaaatttaag ccggccgggc
     1381 tttccaagcc gcttagcttt gcatttaccg ccgacgtttt cggcgattcc atgtctgaaa
     1441 ctatagatgt tcctgtctga aaaaacaaac ttctgcctgt ttttgtgtgg aattcgatgt
     1501 gtattttgaa gggcggatag agatattatg ggtatttttt gttttataac atatggttat
     1561 ttaaattttt taagatttgc atttttacaa cacttactcg ggagggtatt ggagggcatt
     1621 gcaaaccggg ggttataaag acagcaaaaa acgcgcacgt ggtttctttc ggaacgggcg
     1681 gatgcaaaac ccgcccctgc ggcagga
//
LOCUS       DBBZYD010000162         1444 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.162, whole genome shotgun sequence.
ACCESSION   DBBZYD010000162 DBBZYD010000000
VERSION     DBBZYD010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.162"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            27..1364
                     /locus_tag="ACJJDL_002006"
     CDS             27..1364
                     /locus_tag="ACJJDL_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG7574650.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRALRPSTQWLWVGRMGVSACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIAATIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYLISAVIMPVGALSVA
                     VFTAWIQDRQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLDIL"
BASE COUNT          263 a          340 c          389 g          452 t
ORIGIN      
        1 tatcttcaca tttcttaata aattttatga gtaaccatac ttcttggtcg tccaaaatcg
       61 gtttcgtgct tgctgcggca ggttcggcca tcggtttggg cgcgatttgg aaatttcctt
      121 atacggcagg caccaacggc ggcgcggtgt ttttcctgct gtttttgata tttaccgtct
      181 tggtcgccct gcccgtccag cttgccgagt tttatatcgg gcgcacaggc ggtaaaaatg
      241 ccgtcgattc cttcagggct ctgcgtccga gtacgcaatg gctttgggtc gggcgcatgg
      301 gcgtttccgc ctgctttatt ttgctgtcgt tttacagcgt ggtcggcgga tgggtattaa
      361 attatgtcgt ccacagtttc acgggggcgg ttcataccgg cgcggacttt gaagccttgt
      421 tcggcgcgac gatttccaat ccggcaggtt cgctgtccta tcaggcactg tttatgctga
      481 ttacggtttg ggtggtcaaa ggcggcattt cagacggcat tgaaaaggca aaccgttatc
      541 tgatgccggg gctgtttatc ctctttattg cgctggcaat ccgttcgctg acgctgccgg
      601 gtgcaatgga gggcgtgtct ttcctgctca aaccgaattg gtcgtacttt aaagccgata
      661 cgatgattac ggctttaggt caggcgtttt ttgccttgag catcggcgtt tccgctatga
      721 ttacctatgc ttcgtatttg ggaaaagatc aggatatgtt ccgctcgggg catacgatta
      781 tgtggatgaa cctcttggtt tcgctgttgg caggtttggt gatttttccg gcggtgttcg
      841 ccttcggttt tgaaccgagc caggggccgg gattgatttt tatcgtattg ccggcggtgt
      901 ttatgaaaat gccgttcggt acggttttgt ttgcggtatt tatgctgctg gtcgttttcg
      961 ccacgctgac ttcggcattt tcgatgttgg aaacggtcat cgccgcaacc atccgccaag
     1021 acgagcgcaa acgcaaaaaa catacttggc ttatcggcac ggctattttt attgtcggca
     1081 tcccgtccgc gctgtctttc ggcgtatggg gtgagtttaa ggttttcggc aaaaccattt
     1141 ttgatttgtg ggactacctt atttctgcag tcatcatgcc tgtcggcgca ttgagcgttg
     1201 ccgtatttac cgcttggatt caggacaggc agtctgtgtt aaaagatgcc ggcgcgggca
     1261 gcaccgtacc acgggcagtg ttgctgctgt ggctgaatac cttgcgctac ctcgccccga
     1321 ttgccattat tattgttttc atcaattctt tggacatcct ttaaaagcca tccaaacagc
     1381 aaaaatgccg tctgaaagcc tttcagacgg catttttgct tcaggttcag cctatttcgt
     1441 tcaa
//
LOCUS       DBBZYD010000163         1421 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.163, whole genome shotgun sequence.
ACCESSION   DBBZYD010000163 DBBZYD010000000
VERSION     DBBZYD010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.163"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..138)
                     /locus_tag="ACJJDL_002007"
     CDS             complement(<1..138)
                     /locus_tag="ACJJDL_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7574651.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNR
                     YL"
     gene            202..456
                     /locus_tag="ACJJDL_002008"
                     /pseudo
     CDS             202..456
                     /locus_tag="ACJJDL_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216136.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            671..982
                     /locus_tag="ACJJDL_002009"
                     /pseudo
     CDS             671..982
                     /locus_tag="ACJJDL_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349130.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0009289 - pilus [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            1001..1372
                     /locus_tag="ACJJDL_002010"
                     /pseudo
     CDS             1001..1372
                     /locus_tag="ACJJDL_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          404 a          395 c          349 g          273 t
ORIGIN      
        1 aaggtaacgg tttttttgac ggttcaggta ttgttcgatc ggctgccaat caatcacctg
       61 gtccaacttc aatagcggga aacggtcgat gtgtttggca atcatggctt gggcggtttg
      121 ttggaagaag gtgctcatga gaaatcccct aaatgtcttg gtgggaattt aggggatttt
      181 ggggaatttt gcaaaggtct cggaaaatat gttaaggaag ttacagtcgc aaacggcgtc
      241 gttaccgcca caatgctttc aagcggcgta aacaaagaaa tccaaggcaa aaaactctcc
      301 ctgtgggcca agcgtcaaaa cggttcggta aaatggttct gcggacagcc ggttacgcgc
      361 gacaaagccg acaaagccga cgacggcgtt accgccgcca acgacaagca gatcgacacc
      421 aagcacctgc cgtcaacctg ccgcgatgat tcatctaccg gttgcataga aacaccacgc
      481 gccgacttca aacacttcca aaaaatcagc cgttaccgag tattgcccga atcacggcac
      541 atggccgaaa aacttcgtca ttcccgcgca ggcgggaatc caggtctgtc ggtacggaaa
      601 cttatcgggt aaaacggttt cttgagattt tgcgttctgg attcccactt tcgtgggaat
      661 gacgggattt aatgatgccg ccggcgtggc atcctccccc tccgacatca aaggcaaata
      721 tgttcaaagc gttacagtcg caaacggcgt cattaccgcc caaatggctt caagcaacgt
      781 aaacaacgaa atcaaagaca aaaaactctc cctgtgggcc aagcgtcaag acggttcggt
      841 aaaatggttc tgcggacagc cggttcagcg cgccaacgcc aacggcgcca acaacgacga
      901 agtcaccgcc gccaccggca agggcaccga caaaatcgac accaagcacc tgccgtcaac
      961 ctgccgcgac gcatcatctg ccgtttgcac aaaaacaccc gagtattacc tgaatcacgg
     1021 cgaatggccc gccaacaaca gttctgccgg cgtggcaacc tccgccaaca tcaaaggcaa
     1081 atatgttcaa agcgttgaag tcaaaaacgg cgtcgttacc gccacaatgc tttcaagcgg
     1141 cgtaaacaac gaaatcaaag gcaaaaaact ctccctgtgg gccaagcgtc aagacggttc
     1201 ggtaaaatgg ttctgcggac agccggttac gcgcgacgac gccaaagcca ccaacgacga
     1261 cgttaccgcc gacaacggca ccgacaagaa aatcgacacc aaactagaga aaccttttta
     1321 cccgataagt ttccgcaccg acgaggctgg attcccgcct gcgcgggaat gacgaatcca
     1381 tccttttggc tgaaggtcaa aaatcagccg tcaccgagta t
//
LOCUS       DBBZYD010000164         1341 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.164, whole genome shotgun sequence.
ACCESSION   DBBZYD010000164 DBBZYD010000000
VERSION     DBBZYD010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.164"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..137)
                     /locus_tag="ACJJDL_002011"
     CDS             complement(<1..137)
                     /locus_tag="ACJJDL_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HGG7574652.1"
                     /translation="MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKA
                     RR"
     gene            complement(195..385)
                     /locus_tag="ACJJDL_002012"
                     /pseudo
     CDS             complement(195..385)
                     /locus_tag="ACJJDL_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          449 a          293 c          184 g          415 t
ORIGIN      
        1 cgccgcgctt tccaactctg cactttgatt tttccgtaaa caacaggatt atcgttaaac
       61 atcggtgcag cattcagacg ataagataaa gaaacgacaa cacacgccaa cagaaaaaca
      121 tatttgaact tcatcatatt gtccacataa agggcagcct gaaaatcttt caggctgccc
      181 ttgtcaaatt attcctagct ttcggctttt ttggcaaacc aaacaatccg attacccgca
      241 taatactttc catttattga aatccgacaa gccgcgccca aaaatgccat gcactgtcga
      301 tttccgcagc aatctttgta ccgttttctt caaattccaa atattcaccc aataataaac
      361 ttgaaacaga acgcgtgggc agcaagtgcc caccctacgc ttattcaaat aatttgatta
      421 aataaagaat aaagaaaatg catcaggaac aaaattataa tctgccacct gactcacacc
      481 gcttttaaag taaggggcat caaaatcaaa accgcaaaaa aaataatttt tgcattgatt
      541 tttaatagat ttaaaattcg aatatagtgt ttctccagat ttaaaaagtt tatctttatc
      601 tatatatttg atgctttccc tatccaaaat aaatattcaa acattaaaaa atcattacat
      661 gaccaagcca aatcataaat ttgattcaaa tgggtatcat aaagataaaa ataataaggt
      721 ttgggaacag gtaaaatatt taatggaaaa ggaggactaa ttttcttaat atctgatgac
      781 tgatatccat atctttctat attcttaaaa atttcatctt tcttaagata acaagacatt
      841 ctgaagataa caagacattc tgacaatcac aacctgttca tcggatatat tatctatttg
      901 catggcgcgt ataacacgcc atgcctgatt aaaattagtc tcccttacct tagaatctat
      961 tatcttttcc aaagatgaaa atgcccctta tcttgaactc tccagttaga acctggaagt
     1021 ttcgtacctc ttaaatgtgt attaatattt cttatagttt cattaaaatg ccacgcgctg
     1081 ccgatttcaa cggtaatttt cgtaccgctt tcttcaaatt ccaggtattc ccccattagc
     1141 taacgcaaag aagcagacgc catttcggct tcgttatgat aaacccgcct tccgttgata
     1201 tagacttccg cccctgtccg ctccaaattc caaaaattcc gtactgaaat ttccatatcc
     1261 cgatattgtg cagaccatgt tttttcgaag gttttcataa aatttcctat acctgtccaa
     1321 tcggcacata tcaattgcat t
//
LOCUS       DBBZYD010000165         1273 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.165, whole genome shotgun sequence.
ACCESSION   DBBZYD010000165 DBBZYD010000000
VERSION     DBBZYD010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.165"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            588..1273
                     /locus_tag="ACJJDL_002013"
                     /pseudo
     CDS             588..1273
                     /locus_tag="ACJJDL_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581361.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
BASE COUNT          365 a          335 c          259 g          314 t
ORIGIN      
        1 actttcagat aatctttgaa tattgctgtt gttctaaagt ctagattccc gcctgcgcgg
       61 gaatgacgat tcataagttt cccgaaattc caacataacc gaaacctgac agtagccgta
      121 gcaactgaac cgtcattccc gcaaaagcgg gaatctagaa atgaaaagca acaggcattt
      181 atcggaaata actgaaaccg aacagactag attcccgcct gcgcgggaat gacggctgca
      241 gatgcccgac ggtctttata gtggattaac aaaaatcagg acaaggcgac gaagcctcag
      301 acagtacaga tagtacggaa ccgattcact tggtgcttca gcaccttaga gaatcgttct
      361 ctttgagcta aggcgaggca acgctgtact ggtttttgtt aatccactat agtacggaac
      421 cgattcactt ggtgcttcag caccttagag aatcgttctc ttttttgttc atccgctata
      481 ttgtgttgaa acatcgcccc aaacctgata tagtccgctc ctgcaacatc attgaaaatc
      541 gttcttttta atcagttaaa accgaatacg gagccgaaaa tgaatccagc cccaaaaaac
      601 cttctcttct cttctcttct cttctcttct cttctcttct cttctcttcc gcagcgcagg
      661 cggcaagtga agacaatggc cgcggcccgt atgtgcaggc agatttaacc tacgccgccg
      721 aacgcattac ccacaattat ccggaagcaa ccggtgcaga caaaggcaaa ataagcacag
      781 taagcgatta tttcaaaaac atccgtaccc actctgttca acctcgactt tctcttggct
      841 acgatttcgg caactggcgc atcgccgcag attacacgcg ctacagaaag tggaatgaaa
      901 gcaattcttc tactaaaaaa gttactgaac gtataaacga caacaacaaa gaaaccaaaa
      961 cagaacatca ggaaaacggc agcttccacg ccgcttcttc tctcggctta tcagccattt
     1021 acgatttcca aataagcgat aaattcaaac cctatatcgg cgcgcgcgtc gcctacggac
     1081 acgttaggca tcaagttaat tcggtcaata aagaaactat tactgttact cctgtggcga
     1141 gtggcggccc tgttataaca gggccgacca gcaaacctgc ctatcacgaa agccacagca
     1201 tccgccgctt gggtcttggt gtcatcgccg gtgtcggttt cgacatcacg tccaatctga
     1261 ctttagatgc tgg
//
LOCUS       DBBZYD010000166         1262 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.166, whole genome shotgun sequence.
ACCESSION   DBBZYD010000166 DBBZYD010000000
VERSION     DBBZYD010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.166"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..242
                     /locus_tag="ACJJDL_002014"
     CDS             <1..242
                     /locus_tag="ACJJDL_002014"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574653.1"
                     /translation="GETTTYRFLLIRYTTMNPSQYLFIDLNFDKIPDTRLCCFSIFQP
                     TVNLKQPVHAMLQFLFLSADCFDKELKIHFMHLKI"
     gene            350..910
                     /locus_tag="ACJJDL_002015"
     CDS             350..910
                     /locus_tag="ACJJDL_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA large subunit pseudouridine synthase E"
                     /protein_id="HGG7574654.1"
                     /translation="MKNLIAFNKPYGVICQFSPHEKHKSLKDFINFPGFYPAGRLDTD
                     SEGLLLLTDDGRLQAQITDPKFKHPKTYWAQLEGVPDESRLESLRKGIDLGGFVTRPA
                     SIRILKHGEADSLWERIPPIRVRKTVPDFWIEITISEGKNRQVRRMTAKAGYPCLRLI
                     RVASGRLKLFDLDLKPGEWAYAPFKP"
BASE COUNT          352 a          341 c          258 g          311 t
ORIGIN      
        1 aaggcgagac aacgacgtac cggtttttgt taatccgcta taccacgatg aatccttcgc
       61 aatatctgtt tatcgacctc aattttgaca aaataccgga tacgcgcctt tgttgctttt
      121 ccatcttcca accaactgta aatctcaaac agccggtaca cgccatgctt cagtttcttt
      181 tcctgtcggc ggattgtttc gacaaagaat tgaaaatcca tttcatgcac cttaaaattt
      241 aatctgcatt caaacctttt cactttggaa gcaccattta tcggatgtcc cttcgcaata
      301 aacaaatttt cccgataccg ccgcccattt caacccaaac ccaaaagcta tgaaaaacct
      361 catcgccttc aacaaaccct atggcgttat ctgccaattt tcaccgcacg aaaaacacaa
      421 aagcctcaaa gactttatca attttcccgg cttctacccc gccggacggc tcgacaccga
      481 cagcgagggg ctgctgctgc tgaccgacga cggcaggctt caggcacaaa ttaccgaccc
      541 caaattcaaa caccctaaaa cctactgggc gcaactggag ggcgtacccg acgaaagccg
      601 attggaaagc ctaagaaaag ggatagactt aggcggtttc gttacccgtc cggcaagcat
      661 ccgcatcttg aaacacggag aagcagattc gttatgggag cgcatcccgc cgatacgcgt
      721 ccgcaaaacc gttcccgatt tttggattga aattaccatt tctgagggca aaaaccgcca
      781 agtcaggcga atgaccgcca aggcgggcta tccctgcctg cgtctgatca gagtggcaag
      841 cggcaggctg aaactgtttg atttggattt aaaacccggg gaatgggcat acgccccgtt
      901 taaaccataa tcacgtttat ctcatcattt ccacaaaagt gggaatccgg aattttatag
      961 tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtacgaaac
     1021 cgattcactc ggtgcttcag caccttagac aatcgttctc tttgagccaa ggcgaggcaa
     1081 cgccgtactg gtttttgtta atccgctata ttccgccatc tctaagattt acagcgatac
     1141 acgggtaatt taaggaatgc ccgaaccgtc attcccgcca cttttcgtca ttcccgcgaa
     1201 cgcgggaatc tgaatctcgg actttcagat aatctttgaa tattgctgtt gttctaaggt
     1261 ct
//
LOCUS       DBBZYD010000167         1209 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.167, whole genome shotgun sequence.
ACCESSION   DBBZYD010000167 DBBZYD010000000
VERSION     DBBZYD010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.167"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(367..777)
                     /locus_tag="ACJJDL_002016"
     CDS             complement(367..777)
                     /locus_tag="ACJJDL_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574655.1"
                     /translation="MKIYNLDNIITSSALSLYKSTWVKLDLISCAKFIIKGTDFTFDW
                     DEGIENWIVFFHKNKVIGYLCAKLPFAILDNEQLKNQLYHKYPHVLTLQIKNIETEKI
                     SLNVNICRLTLCPSFHDEHDTLVCSVQDFYVNTV"
     gene            complement(781..>1209)
                     /locus_tag="ACJJDL_002017"
     CDS             complement(781..>1209)
                     /locus_tag="ACJJDL_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HGG7574656.1"
                     /translation="PAKQATPNGKAGVSTQQSLQNSLVPQKNYTHTTYNGGSAITDGK
                     YITDPLSMVRHKPDASSLDKIDSKSLFKSDVDAEKATLDAARYADKHNLWDSQNKAKV
                     PTNDVVGYTDGKPTHIINIYRRKPNKDGFRPVHGTPGKER"
BASE COUNT          363 a          216 c          197 g          433 t
ORIGIN      
        1 gagttacccg tatgattgcc gtatggtcgg atacttgtat ccgacaaaaa tatttgacgc
       61 gtctatcgtt tccgaaatgc cgctgttgaa aaacgtcgga ttcgagaatc cgacctacgg
      121 ttgctgaaca atgttttgta gaacttgctc aaaatccatg tttcgccatt ttcctttata
      181 tatacctaat gcagcacggg ttacgatttc gtttaagtca taaatagcca tttacgtcct
      241 ctgctaattt tcagcgagta gattgggtta ccaaacccaa caaaaaagca gcctgaaaaa
      301 tttcaggatg cttgttttat gttttttatc aatgaattag gttttaatcc agcctgcgct
      361 tgctagttaa acagtattta cataaaaatc ttgcactgaa caaacaagcg tatcatgttc
      421 atcatgaaat gatgggcata acgttaatct acaaatgttt acatttaaag atattttttc
      481 agtttcaata tttttaattt gtaaggttaa tacatgagga tatttgtgat atagctgatt
      541 ttttaattgt tcgttgtcta atatagcaaa aggtaatttt gcacacaaat aaccaataac
      601 tttgttttta tgaaaaaaaa ctatccaatt ttcaattcct tcatcccaat caaaagtaaa
      661 atccgttcct tttatgataa atttagcaca agatattaaa tctaacttaa cccaagtgga
      721 tttatacaga ctcaatgctg atgaagttat aatattatct aaattataaa ttttcataaa
      781 tcaacgttcc ttacctggtg ttccatgcac aggtctaaac ccatctttat tcggctttct
      841 acgataaatg ttaattatat gtgtcggttt tccgtctgta tagccaacta cgtcgttcgt
      901 tggaactttt gccttatttt gactatccca taaattatgt ttatctgcat atctagcagc
      961 atctaatgta gctttttccg catcaacatc tgatttaaat aaacttttgc tatctatctt
     1021 gtctagacta gatgcatcag gtttgtgtcg taccatactg agagggtcag taatatattt
     1081 accatctgta atagctgatc caccattata ggtagtatgc gtataatttt tttgtggaac
     1141 gagactattt tgcaaagatt gttgtgtaga aacgccagct ttgccattag gagtagcttg
     1201 cttcgctgg
//
LOCUS       DBBZYD010000168         1158 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.168, whole genome shotgun sequence.
ACCESSION   DBBZYD010000168 DBBZYD010000000
VERSION     DBBZYD010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.168"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..124)
                     /locus_tag="ACJJDL_002018"
     CDS             complement(<1..124)
                     /locus_tag="ACJJDL_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7574657.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQ"
     gene            409..1080
                     /locus_tag="ACJJDL_002019"
     CDS             409..1080
                     /locus_tag="ACJJDL_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7574658.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          322 a          253 c          268 g          315 t
ORIGIN      
        1 tttgacggtt caggtattgt tcgatcggct gccaatcaat tacctgatcc aacttcaata
       61 gcgggaaacg gtcgatgtgt ttggcaatca tggcttgggc ggtttgctgg aagaaggtgc
      121 tcatgagaaa tcccctaaat gtcttggtgg gaatttaggg gattttgggg aattttgcaa
      181 aggtctcaaa cggatgaaat caaccgatat tcaaacacag tcatttttag cgcattttca
      241 gcgtatcgtt aatgcggaaa atttcgtgaa caggtttttt gcacaggtct ccgcctcgtt
      301 tcgcgggatg ggaaaccgta ttagaaaacg gacgcacgca acataaaccc cgaaagtgat
      361 gataagatga tgatttaacg tactgcttta attatttaag gaattatcgt gtttcccgac
      421 aaatacaagt tgagtttgga agaaaatatt tttctggcaa agaaagtatt ggttgcccaa
      481 attcacaacc tcagccgttt tgagaattgt cagacgacct tgttgcagac cgaacaaatt
      541 atccatggca aaaatgtagc ctccgcgtca ctggaagaca tccaaaccat cttgaacctg
      601 aaacgtgcct atcaatatgt gatttcgcat atttcaaacg gcgaaccggt cgatatttca
      661 ctccttaaaa aaatcaacaa cattgttgcc aaggacgatt ctttggcacc cggtgatttc
      721 cgtaccggtt cggtcggcgt aacgctattg gacggttccc gtcatgcccc aaatccggtg
      781 aaggaaattg aagtggctcg cgtgttacaa aatatcggac tgcaaagcgg ttcgacgacg
      841 gaggcagccg tccgttttat gctttattgt atgcggcagc aggttttttg ggacggcaac
      901 aaacgaacgg caaccttatt tgccaacggt ctgatgatgg cggggggctg cggcatcttg
      961 gaaatctccg aaatgcagat gccgcaattc aatgaaaaac tgtccgcatt ctatcgctcc
     1021 ggcgacgata ccgatatttc caagtttgtg tatcaaaatt gtatatcggg catagactga
     1081 gacctttgca aaattcccca aaatccccta aattcccacc aagacattta ggggatttct
     1141 catgagcacc ttcttcca
//
LOCUS       DBBZYD010000169         1144 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.169, whole genome shotgun sequence.
ACCESSION   DBBZYD010000169 DBBZYD010000000
VERSION     DBBZYD010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.169"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..>1144
                     /gene="tuf"
                     /locus_tag="ACJJDL_002020"
     CDS             <1..>1144
                     /gene="tuf"
                     /locus_tag="ACJJDL_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012081251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HGG7574659.1"
                     /translation="RSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQID
                     NAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAA
                     DGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDD
                     CPIVQGSALKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRG
                     TVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTK
                     REDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGA
                     VTLEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGV"
BASE COUNT          297 a          320 c          301 g          226 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttggc taaaaaattc ggtggtgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtggaatac gaaaccgaaa cccgccacta cgcacacgta gactgcccgg ggcacgccga
      241 ctacgttaaa aacatgatta ccggcgccgc acaaatggac ggtgcaatcc tggtatgttc
      301 cgcagccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gtcaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatt gtacaaggtt ctgcactgaa agccttggaa ggcgatgccg cttatgaaga
      541 gaaaatcttc gaactggctg ccgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaaccg ttcctgctgc ctatcgaaga cgtgttctcc atttccggcc gaggtacagt
      661 agtaaccggc cgtgtagagc gcggtatcat ccacgttggt gacgagatcg aaatcgtcgg
      721 tctgaaagaa acccaaaaaa ccacctgtac cggtgttgaa atgttccgca aactgctgga
      781 cgaaggtcag gcgggcgaca acgtaggcgt attgctgcgc ggtaccaaac gtgaagacgt
      841 ggaacgcggt caggtattgg ccaaaccggg tactatcact cctcacacca aattcaaagc
      901 agaagtgtac gtactgagca aagaagaggg cggccgccat actccgttct tcgccaacta
      961 ccgtccgcaa ttctacttcc gtaccaccga cgtaaccggc gcggttactt tggaagaagg
     1021 tgtggaaatg gtaatgccgg gtgagaacgt aaccattacc gtagaactga ttgcgcctat
     1081 cgctatggaa gaaggcctgc gctttgcgat tcgcgaaggc ggtcgtaccg tgggtgccgg
     1141 cgtg
//
LOCUS       DBBZYD010000170         1099 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.170, whole genome shotgun sequence.
ACCESSION   DBBZYD010000170 DBBZYD010000000
VERSION     DBBZYD010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.170"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            94..>1099
                     /gene="fic"
                     /locus_tag="ACJJDL_002021"
     CDS             94..>1099
                     /gene="fic"
                     /locus_tag="ACJJDL_002021"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HGG7574660.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVSKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     D"
BASE COUNT          334 a          292 c          246 g          227 t
ORIGIN      
        1 ttacaaaagc caaattttta aacatatatc cttgatatat acacggcgta aatatatact
       61 ggaaacatct ttaaattttc cgaaatttta aacatgagca actggaaacc cgatattccc
      121 tataacgatt taccacccct gccgccaaaa caggatattg aaagcaaaac catcctgaaa
      181 cgttgtatag ccgcccgtgc atcccttgcc cgtttaaagc aggcggcaga attgataccg
      241 aatcaagcca tgctgattaa cacccttcct gttatggaag cccgtgcaag ttcggaaatt
      301 gaaaacatcg taaccaccac ggacaagctg tttcaatccc tgcaaatgga tacggaacgg
      361 caagaccctg ccacgaaaga agccctgcaa taccgcaccg ccctgtttgc aggctatgaa
      421 tcactgacga gccgcccttt atgcacacaa accgccatca tggtctgcaa cgccatcaag
      481 cacccctacg aaatggccat ccgcaaaaca ggcggcacag ccctaaaagg aggcaacagc
      541 ggaaatgttg tctatacccc gcccgaagga gaagaaacca tacgcggcaa gctggcaaat
      601 tgggagcggt ttattcacga aagcggcgat ttagacccgc ttatcatcat ggcggcggca
      661 cattaccaat ttgaagccat ccatccgttt acggacggca acgggcggac ggggcgcata
      721 ttgaacagcc tgctattgat tgaaaaaggg cttttggatt tgcctatttt gtatttgagc
      781 cgctacatca tcgaaaacag ggcggactat taccgcctgc ttttaggcgt aaccgaacgg
      841 caggactggg aaagctggat aatctacatc ttagacggcg tagctgacac cgccgattgg
      901 acggtatcga aaatagatgc gatacgccgc ctgttcgagc agacacggca acacatacgg
      961 acacacgcac aaggaatcta cacgcacgaa ctggtaaatc ttctgtttga gcagccatat
     1021 acacgcattg ccaacctaga agcggcaggg atagccaaac ggcagacggc ctctaagtac
     1081 ctgaaagagc tttcagaca
//
LOCUS       DBBZYD010000171         1050 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.171, whole genome shotgun sequence.
ACCESSION   DBBZYD010000171 DBBZYD010000000
VERSION     DBBZYD010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.171"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            18..602
                     /gene="rnhB"
                     /locus_tag="ACJJDL_002022"
     CDS             18..602
                     /gene="rnhB"
                     /locus_tag="ACJJDL_002022"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HGG7574661.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
     gene            complement(863..>1050)
                     /locus_tag="ACJJDL_002023"
     CDS             complement(863..>1050)
                     /locus_tag="ACJJDL_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574662.1"
                     /translation="IFVNPLYRHSRKNKKIKNTKLKYRHSRAGGNLGLSVRKLIGKNG
                     FSNPETPDSCFRGNPVF"
BASE COUNT          302 a          301 c          236 g          211 t
ORIGIN      
        1 tcccgacagg aaacatcatg cacatactga ccgccggcgt ggacgaggca gggcgcgggc
       61 ctttagtcgg cagcgtgttt gccgccgccg tcatccttcc ggaaatattc gacctgcccg
      121 gactgaccga ctccaaaaaa ctcagcgaga aaaaacgcga cgcgcttgcc gaaatgataa
      181 aaaatcaggc ggttgcgtgg cacgttgccg ccgcctcgcc cgaagaaatc gccagcctca
      241 acatcctgca cgccaccatg ctcgcgatga aacgcgccgt tgacggtttg gctgtgcgtc
      301 ccgaaagaat attcatcgac ggcaaccgca ttcccgaaca tttgaacatc cctgccgaag
      361 ccgtcgtcaa aggcgacagc aaaatcatcg aaatctccgc cgcatccgtt ttggcaaaga
      421 ccgcacgcga tgcagaaatg tacgcactgg cgcaacgcca tccccaatac ggtttcgaca
      481 aacacaaagg ttacggcacg aagcagcatc tggaagccct caaacaatac ggcgtgctgc
      541 ccgaacaccg ccgagacttc gcccccgtca gaaacctgct cgcgcagcag gccttgtttt
      601 aaaccggcac aaaaatgccg tctgaacttc agacggcatt ttcagcatcg caacttcaaa
      661 gagaaagaac ccaaaccgtc attcccgcga aaaatagaaa atcaaaaaaa aacctaaaat
      721 ccgtcattcc cgcgcaggcg ggaatccaat ccgtccggtt tccgtttttt ttgaatttca
      781 ggtaacttcc aaaccgccat tcccgcaaaa gcgggaatct agaaactcaa agctgcaaga
      841 atttatcaaa aatgactgaa actcaaaaaa ccggattccc gcgaaaacag gaatccggag
      901 tctcagggtt ggaaaaaccg tttttcccga taagtttccg taccgacaga cctagattcc
      961 cgcctgcacg ggaatgacga tatttcagtt ttgtgttttt gatttttttg tttttgcggg
     1021 aatgacgata tagtggatta acaaaaatca
//
LOCUS       DBBZYD010000172         1038 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.172, whole genome shotgun sequence.
ACCESSION   DBBZYD010000172 DBBZYD010000000
VERSION     DBBZYD010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.172"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            68..1033
                     /locus_tag="ACJJDL_002024"
     CDS             68..1033
                     /locus_tag="ACJJDL_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element IS1655 family transposase"
                     /protein_id="HGG7574663.1"
                     /translation="MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRH
                     RTQGQQYSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCKHH
                     QITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPA
                     IVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICRLDSLKAEDTARAAVRALK
                     AHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPK
                     QTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLIH"
BASE COUNT          332 a          315 c          216 g          175 t
ORIGIN      
        1 caactttccc taacagaaaa aggccagtat gcggtagcat acggcctttc ctgcaagaaa
       61 gattgccatg agctacacgc aactgaccca aggcgaacga taccacatcc aatacctgtc
      121 ccgccactgc accgtcaccg aaatcgccaa acagctgaac cgccacaaaa gcaccatcag
      181 ccgcgaaatc agacggcacc gcacccaagg gcagcaatac agcgccgaaa aagcccagcg
      241 gcaaagccgg actatcaaac agcgtaagcg acaaccctat aagctcgatt cgcagctgat
      301 tcagcacatc gacaccctta tccgccgcaa actcagtccc gaacaagtat gcgcctacct
      361 gtgcaaacac caccagatca cgctccacca cagcaccatt taccgctacc ttcgccaaga
      421 caaaagcaac ggcagcacgt tgtggcaaca tctcagaata tgcagcaaac cctaccgcaa
      481 acgctacggc agcacatgga ccagaggcaa agtccccaac cgtgtcggca tagaaaaccg
      541 acccgctatc gtcgaccaga aatcccgtat cggcgattgg gaagccgaca ccattgtcgg
      601 caaaggacag aaaagcgcat tattgacctt ggtcgaacgc gttacccgct acaccatcat
      661 ctgcagattg gatagcctca aagccgaaga cactgcccgg gcagctgtta gggcattaaa
      721 ggcacataaa gacagggtgc acaccattac catggataac ggcaaagagt tctaccaaca
      781 caccaaaata accaaagcat tgaaagcgga gacttatttt tgtcgccctt accattcttg
      841 ggagaaaggg ctgaatgaga acaccaacgg actcatccgg caatacttcc ccaaacaaac
      901 cgatttccgt aacatcagtg atcgggagat acgcagggtt caagatgagt tgaaccaccg
      961 accaagaaaa acacttggct acgaaacgcc aagtgtttta ttcttgaatc tgttccaacc
     1021 actaatacac tagtgttg
//
LOCUS       DBBZYD010000173          972 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.173, whole genome shotgun sequence.
ACCESSION   DBBZYD010000173 DBBZYD010000000
VERSION     DBBZYD010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.173"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..867)
                     /gene="mafB"
                     /locus_tag="ACJJDL_002025"
     CDS             complement(<1..867)
                     /gene="mafB"
                     /locus_tag="ACJJDL_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HGG7574664.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDHHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WGNRMDDIRGIIQGAANPFLTGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLS
                     PEAQLAAATALQD"
BASE COUNT          223 a          242 c          222 g          285 t
ORIGIN      
        1 gtcttgtaat gcggttgcgg ccgcaagttg tgcttccgga cttaaatttc ctaaattgtg
       61 aataccctgt aaagttttcc gtgctgccgc ataggttacc gggtttaccg cactgtctgt
      121 aattgcccca actcccaatc cctgaaaacc cgttagaaaa ggattggctg caccttggat
      181 gatgccgcga atatcatcca tacggttacc ccaccaattt ttattggggt cgctttccca
      241 tatcagtttt cctgcttcat ccgcacggct gaaaaaacca gaggcggcac cggcattttc
      301 ttttagccaa cggtctgaaa atggggcttg agggacaata ttagtctttg tttttgttga
      361 agttcctttg acatagtagc tgtatatatc ccttgctcct ccggggggcg gataatcgct
      421 gccttgcggt ccgtcatatc catcctccgg atggatttcc gaccctgtcc gatgaagttg
      481 gtaaacagta aaaccgccgt ctacaccgcc gctgaaatca gaagtgcttt ttgaatcatg
      541 atgatcgaac ggactgtgta cttcatgtcc gtgccctgaa aaatgggttt catagccgat
      601 aacaccttca aaccctgtcc gttcgtgtgt aataggcagt atggggccga ccgcagttgc
      661 atcaaatgtt tggacggcgt aaacccgatt tttaacactg ccgcgaccat caccgaacag
      721 atggtatttg ccacccggtt cgtagtgttt tgcctgcata tcatcgcgca aacgggcatc
      781 caaaccgttc gcatgactaa tggggatttg cagcaacgat attgctgctg caaacagcat
      841 catgaatttt tgaataggca aattcatttt gttttccttg gtagcaagcg gttatggtag
      901 tgtgaatcaa ggttgccctt gtctatgttg tcgcactact tcatcgctgt atccataccc
      961 ctcatgactg tt
//
LOCUS       DBBZYD010000174          861 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.174, whole genome shotgun sequence.
ACCESSION   DBBZYD010000174 DBBZYD010000000
VERSION     DBBZYD010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.174"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            80..>861
                     /locus_tag="ACJJDL_002026"
     CDS             80..>861
                     /locus_tag="ACJJDL_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7574665.1"
                     /translation="MQPPKNLLFSSLLFSSLLFSSLLFSSLLFSSLLFSSLLFSSLLF
                     SSAAQAASEDSSRSPYYVQADLAYAAERITHDYPKPTGTDKDKISTVSDYFRNIRAHS
                     IHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKEVLRNNNGNRKELKTENQENGT
                     FHAVSSLGLSAIYDFKLNDKFKPYIGARVAYGHVRYSIDSTKKTTDVVTVATNTPDGA
                     PTIYNEPKTQNAYHESHSIRRLGLGVVAGVGFDITPKLTLDTG"
BASE COUNT          236 a          248 c          160 g          217 t
ORIGIN      
        1 ctgatatagt ccgctcctgc aacatcattg aaaatcgttc tttttaatca gttaaaaccg
       61 aatacggagt cgaaaatgaa tccagccccc aaaaaacctt ctcttctctt ctcttctctt
      121 ctcttctctt ctcttctctt ctcttctctt ctcttctctt ctcttctctt ctcttctctt
      181 ctcttctctt ctcttctctt ctcttctctt ctcttccgca gcgcaggcgg caagtgaaga
      241 cagcagccgc agcccgtatt atgtacaggc ggatttagcc tacgccgccg aacgtattac
      301 ccacgattat ccgaaaccaa ccggtacaga caaagacaaa ataagcacag taagcgatta
      361 tttcagaaac atccgtgcgc attccatcca cccccgggtg tcggtcggct acgatttcgg
      421 cggctggagg atagcggcag attatgccag ttacagaaaa tggaacaaca ataaatattc
      481 cgtcaacaca aaagaggtgc taagaaacaa taatggcaac aggaaagaac tgaagacgga
      541 aaatcaggaa aacggtacat tccacgcagt ctcatcgctc ggcttatccg ccatttacga
      601 tttcaaactc aacgataaat tcaaacccta tatcggtgcg cgcgtcgcct acggacacgt
      661 cagatacagc atcgattcga ccaaaaaaac aacagatgtt gttaccgtcg ccaccaatac
      721 tcctgacgga gcacctacga tttataatga gccaaagacg caaaacgcct atcacgaaag
      781 ccacagcatc cgccgcttgg gtcttggtgt cgtcgccggt gtcggtttcg acatcacgcc
      841 caagctgact ttagacaccg g
//
LOCUS       DBBZYD010000175          819 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.175, whole genome shotgun sequence.
ACCESSION   DBBZYD010000175 DBBZYD010000000
VERSION     DBBZYD010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.175"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(207..602)
                     /locus_tag="ACJJDL_002027"
     CDS             complement(207..602)
                     /locus_tag="ACJJDL_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7574666.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDPETDKFAKVSG"
     gene            complement(586..>819)
                     /locus_tag="ACJJDL_002028"
     CDS             complement(586..>819)
                     /locus_tag="ACJJDL_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HGG7574667.1"
                     /translation="VIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFSDNS
                     EKVIKESLKDGHKIYKFEFCEIVDNCNFDDVFV"
BASE COUNT          224 a          188 c          157 g          250 t
ORIGIN      
        1 tcgcgggaat gacgaaaagt ggcgggaatg acgaaaagag acctttgcaa aattcctttc
       61 cctcccgaca gccgaaaccc aaacacaggt tttcggctgt tttcgctcca taacacctcc
      121 taattctacc caaatatccc cttaatcctc cccggatacc cgataatcag gcatccggac
      181 cgccttttag gcggcaacag gcgcacttag cctgagacct ttgcaaattt gtcggtttcg
      241 gggtcgtatt ggtagcctcg tgcctgtatg tcttctttga aagtttcgta tacgtcatgg
      301 gctaaaaggg ctgttccgac atagggaacc gcccttgtgc tgaatttcgc gcctaagcgg
      361 gcaagtttgc cgccccccgc caatacgccg gcgcgggaaa tgctggcggt tattttggcg
      421 ttgattcggg cttttgcgcc cgtagggatg tgtgttaaat ctaccgtttt tattaaatca
      481 gatgaataag ttttactatt tttaggtaca aacttatgaa ttttcgcacc ttgtccggta
      541 tcaactgaaa cagtttcaga tatttttact gcatttgcat tcgcttcaaa cgaatacatc
      601 atcaaaattg caattatcga caatttcgca aaattcaaat ttgtatattt tatgaccatc
      661 tttcagggat tctttaatta ccttttctga attatcagaa aatgagatta gccaaatatc
      721 atgtttaatt cttctattcc agaaaaaaga gaaacaatca ataacatttt cagacttatt
      781 aatcttcgca aattcaacaa attcagattg cgctataac
//
LOCUS       DBBZYD010000176          769 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.176, whole genome shotgun sequence.
ACCESSION   DBBZYD010000176 DBBZYD010000000
VERSION     DBBZYD010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.176"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(1..173)
                     /locus_tag="ACJJDL_002029"
                     /pseudo
     CDS             complement(1..173)
                     /locus_tag="ACJJDL_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(516..>769)
                     /locus_tag="ACJJDL_002030"
     CDS             complement(516..>769)
                     /locus_tag="ACJJDL_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HGG7574668.1"
                     /translation="KVEVANGVITATMLSSGVNKEIQGKKLSLWAKRQAGSVKWFCGQ
                     PVTRAAPNASADAVNKVTGNEIDTKHLPSTAPTRKSTPN"
BASE COUNT          154 a          162 c          213 g          240 t
ORIGIN      
        1 ctgtgtttgg gtttcggctg tcgggaggga aaggaatttt gcaaaggtct ctttcctttg
       61 attttagagg aggatgccac gtcggcatca ctgttgccgc cgggccattt gccgtgattc
      121 aggtaatact cggtgacggc tgatttttga ccttcagcca aaagaatggc ttcgtcattc
      181 ccgcgcaggc gggaatccag gtctgtcggt gcagaaactt atcgggaaaa cggtttcttg
      241 agattttacg ttctggattc ccactttcgt gggaatgacg ggatttaagt ttcaaaattt
      301 attctaaata actgaaactc aacgaactag attcccgctt ttgcgggaat gccgaatttt
      361 aggtttctta ttttggtttt ctgtccttgt gggaatgatg aaattttaag ttttaagaat
      421 ttatcggaaa aaacagaaac cgctccgccg tcattcccgc gcaggcggga atctagcctc
      481 gtcggtgcgg aaacttatcg ggtaaaaagg tttctctagt ttggtgtcga ttttcttgtc
      541 ggtgctgttg acggcaggtg cttggtgtcg atttcgttgc cggtgacttt gttaacggcg
      601 tcggcgctgg cgttgggggc ggcgcgcgta accggctgtc cgcagaacca ttttaccgaa
      661 ccggcttgac gcttggccca cagggagagt tttttgcctt ggatttcttt gtttacgccg
      721 cttgaaagca ttgtggcggt aatgacgccg tttgcgactt caactttct
//
LOCUS       DBBZYD010000177          720 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.177, whole genome shotgun sequence.
ACCESSION   DBBZYD010000177 DBBZYD010000000
VERSION     DBBZYD010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.177"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(38..604)
                     /locus_tag="ACJJDL_002031"
     CDS             complement(38..604)
                     /locus_tag="ACJJDL_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HGG7574669.1"
                     /translation="MGFYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWVAFVLLGGLGLKMMREGLSGEAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVMVAVGLTAGRALGVLF
                     GRCAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          211 a          246 c          137 g          126 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactatattt tccgacatca ttgaatcaaa cccaaatgcg
       61 acaagagcgt ccatgtgccg atggcaatca acaccaaacc tccggcaaat tccgcacacc
      121 tgccgaacaa tacgcccaaa gcccttcccg ccgtcagccc gaccgccacc atcaccgtcg
      181 tcgccatacc gatgattgcg gcggcaaagg cgatgtttac ctccataaac gccaagccca
      241 ccccgactat catggaatca atactggttc caaaagcagt caaaaccgtc atccataggc
      301 tttcccgttt gctttcgcgc acatcttccg cctcgccgga cagcccttcg cgcatcattt
      361 tcagacccag cccgcccagc aggacgaaag ccacccaatg gtcccattcg ctgataaacg
      421 gcttggcata aaaaccgcct acccagcctg ccagcggcgt gagcgcttca accgtgccga
      481 acaccaaagc cgttgccgca attttgcgcg gaggcattct gaccgccgcg ccctttgcca
      541 atgcgacggc aaacgcatcc atcgacatcc ccagagcaat caagagcaaa gcataaaaac
      601 ccataccgca cccgtcctca aaaagggcgg attatagcaa aagcaaaaaa atgcaaaaat
      661 gccgcacgaa aacccgcatc ccgtcattcc cgcaaaaaca aaaaatcaaa aacagaaatc
//
LOCUS       DBBZYD010000178          713 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.178, whole genome shotgun sequence.
ACCESSION   DBBZYD010000178 DBBZYD010000000
VERSION     DBBZYD010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.178"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          187 a          169 c          162 g          195 t
ORIGIN      
        1 tatatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacaaatagt
       61 acgaaaccga ttcacttggt gcttgagcac cttagagaat cgttctcttt gagctaaggc
      121 gaggcaacgc cgtactggtt tttgttaatc cactataccg tcgttcccac ggtcaggatt
      181 tcagattgcg gacatctgtc agaaaagaca aaaaaccttc cgccgttatt ccctacaggc
      241 gagaatccga tccgttgaaa ttcggttgtt ttaaataaat tcttgcagct ttgattttct
      301 gtttttccga taacgccgta actttgaaac gcgaaagcgg taatccgatc cgttgggatt
      361 ttgcaacttc aaatcaatcc gcaaactgaa atcccgtcat tcccgcgcag tcgtgaatcc
      421 gaacgcgtcc gcacgaaaac ctgcatcccg tcattcccac gaaagtggga atccagtttt
      481 ttgagtttca gtcattcccg ataaattgcc ttagcattga atgtctagat tcccgcctgc
      541 gcgggaatga cgggatttta agttggggtc atttattgga aaaagcagaa accgctccgc
      601 cgtcattccc acgaaagtgg gaatccagtt cgttcggttt cgcttgtttt aagtttcggg
      661 taacttccac ttcgtcattc ccacgaaagt gggaatctag gacgcggggt tgg
//
LOCUS       DBBZYD010000179          709 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.179, whole genome shotgun sequence.
ACCESSION   DBBZYD010000179 DBBZYD010000000
VERSION     DBBZYD010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.179"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          172 a          148 c          186 g          203 t
ORIGIN      
        1 agaccgttgg gcatctgcag ccgtcattcc cgcgcaggcg ggaatctagt ctgttcggtt
       61 tcagttattt tcgataaatg cctgttgctt ttcatttcta gattcacact ttcgcgggaa
      121 tgacgaattt taggtttctg attttggttt tctgtccttg tgggaatgac aggatgtagg
      181 ttcgtaggaa tgacgtggtg caggtttccg tgcggatgga ttcgtcattc ccgcgcaggc
      241 gggaatccag accttaaggc agcggcaata ttcaaagatt atctgaaagt ctgagattct
      301 agattcccac tttcgtggga atgacggttc agttgctacg gttactgtca ggtttcggtt
      361 atgttggaat ttcgggaaac ttatgaatcg tcattcccgc gcaggcggga atctggaatt
      421 tcaatgcctc aagaatttat cggaaaaaac caaaaccctt ccgtcatcat tcccgcaaaa
      481 gcgggaatct agaaatgaaa agcaacagga atttatcgga aatgaccgaa actgaacgga
      541 ctggattccc tcttttgcgg gaatgacggc gacagggttg ctgttatagt ggatgaacaa
      601 aaaccggtac ggcgttgtct cgccttagtt cgaagagaac gattctctaa ggtgctgaag
      661 caccaagtga atcggttccg tactatctgt actgtctgcg gcttcgtcg
//
LOCUS       DBBZYD010000180          703 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.180, whole genome shotgun sequence.
ACCESSION   DBBZYD010000180 DBBZYD010000000
VERSION     DBBZYD010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.180"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            26..703
                     /locus_tag="ACJJDL_002032"
     CDS             26..703
                     /locus_tag="ACJJDL_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HGG7574670.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
BASE COUNT          217 a          136 c          156 g          194 t
ORIGIN      
        1 tcaaaaaacc tgataagctc ctaatatgaa actaaaaaat aagtatcaaa agttcagcaa
       61 aatttcagag caaaagttta gagaaataat ccgctgtttc gctcttgatt tgaccgcttc
      121 cgatactgct aaaatgaccg gcattagtgt acgcggtatc aatcctattt tcctgaaaat
      181 cagacacagg attgctgctc tgtgcgaaca aagctcacca ctgtccggtg tggtcgaatt
      241 agatgaatct tactttggtg cgcgacgtat caggggtaag cgcggtcgcg gagcgtcagg
      301 taaaaccatc gtatttggca tactgaaacg caatggcgtg gtctatacgg aaatcgttcc
      361 cgacgcttcg aaagcctcac taatcaaggt catacgtggt cacatatctg ctgacagtga
      421 aatcaatact gacggctgga aagcatatga cggtcttgtc gatatgggct atgagaagca
      481 ttaccgtgtc catcatggtt ccaatgagtt tgctcgagga aagcaacata tcaatggtat
      541 tgaatctttt tggagttata ctaaggggcg tttggctaaa tttcatggta tttccaaaga
      601 gatgttttat ctgcatctca aagaaacgga gtttaggttt aaccaccggc atgaagattt
      661 aggtaaaata ttaatgaaga tgcttcgaaa taacccaatt taa
//
LOCUS       DBBZYD010000181          698 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.181, whole genome shotgun sequence.
ACCESSION   DBBZYD010000181 DBBZYD010000000
VERSION     DBBZYD010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.181"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..698)
                     /locus_tag="ACJJDL_002033"
     CDS             complement(join(<1..479,479..698))
                     /locus_tag="ACJJDL_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242698.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HGG7574671.1"
                     /translation="MARTAITDNIWEQLQTTMKAHGCHQWKNDRTVMEAILWKLRTGA
                     PWRDIPIELGSWKTAYNRFNRWSKKGLWQKFFFDLRKEIDKEWVFIDGSYVRCHQHAS
                     GARRGFDRAIGQSRGGNTTKIHLCVDSHGNPLDFKVTGGNVHDSQVANDLIEVIQEAQ
                     YFIADKGYDSQEIRDKAIEHGMKAIIPKRKNAKKPNPDFDSYLYKLRHLVENAFARLK
                     QFRSIATRYEKLARN"
BASE COUNT          161 a          161 c          136 g          240 t
ORIGIN      
        1 attacgagct aatttctcat agcgagtagc aatactacga aactgcttta atcgtgcaaa
       61 tgcattctcg actaagtggc gtaatttata aaggtagcta tcaaaatcag ggttaggttt
      121 cttggcattt ttacgctttg gtataatagc tttcataccg tgttctatcg ctttatctct
      181 gatttcttgc gagtcatacc ctttgtcagc gataaaatac tgggcttctt gtatgacttc
      241 tatcaagtcg tttgcaactt gactgtcgtg cacgttaccc ccagtgactt taaaatcgag
      301 cggatttcca tgcgagtcca cacataggtg tatttttgtc gtgtttccgc cacggctttg
      361 tccaattgct ctatcgaaac cacgccgagc tccacttgca tgttgatgac accgtacata
      421 acttccgtcg atgaataccc attctttgtc aatttctttt cgtagatcaa aaaaaaattc
      481 tgccacaagc cttttttaga ccatcggtta aagcggttat aagcggtttt ccatgaccct
      541 agctcaatag gtatgtctcg ccatggtgca cctgttctta gcttccatag tatggcttcc
      601 atcacggtac ggtcgttctt ccattgatga cagccgtgcg ctttcatggt tgtttgtaat
      661 tgttcccata tgttgtcagt tattgcggtt ctcgccat
//
LOCUS       DBBZYD010000182          651 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.182, whole genome shotgun sequence.
ACCESSION   DBBZYD010000182 DBBZYD010000000
VERSION     DBBZYD010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.182"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(51..536)
                     /locus_tag="ACJJDL_002034"
     CDS             complement(51..536)
                     /locus_tag="ACJJDL_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HGG7574672.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAAGFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          194 a          212 c          116 g          129 t
ORIGIN      
        1 tcaaaccgga aaaatgccgt ctgaatcttc agacggcatt ccattcatat ttattcgtct
       61 tttttgtgtt cgatggcgtt tcgggaacga ttgccgccgt aaggctcttc aaccgtatat
      121 tccccctcga taatatcgtc atcgcgggaa aagccctctt ttctgcccga ttggttcatg
      181 ttgaaaaaat tttccgcacc tcctgcctgc aacactgcac ctcccttaaa cggcagcagc
      241 agcaacaccg ccaacaccga ggatacgaat cccggactca tcagacacac cgccgccacc
      301 gtataacgga taggccacaa catctgataa acggataccc tcccgccgct tctcattgcc
      361 gcgcccgcca ataaaagacc ggacagcccc gtatgcctga gcatcagcac accggcggca
      421 aaacctgccg ccatcaaaaa caacgtccag ccgccgccca accaatcggc aacccacaca
      481 atcgacataa tctccaaaaa cagcagcacc aaaaaaccga taccgaaaaa tctcattgac
      541 cgtcatcctt atatttaagt aaacagcaaa ccgcccgaac aggactccaa gcgacctgcc
      601 tgtaaatgat tacaaaacca tgtgcttcaa gccgaaacaa tgtgaaatca c
//
LOCUS       DBBZYD010000183          597 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.183, whole genome shotgun sequence.
ACCESSION   DBBZYD010000183 DBBZYD010000000
VERSION     DBBZYD010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.183"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            172..465
                     /locus_tag="ACJJDL_002035"
     CDS             172..465
                     /locus_tag="ACJJDL_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574673.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPERPDCFDMKAVWQMFNRIPR"
BASE COUNT          158 a          150 c          160 g          129 t
ORIGIN      
        1 tccattcggc agggaaagcc tgaagaagaa ttttcccgta agatggccgg ctgcctgacc
       61 gacttggaaa actgtttgga aaaatacctc gaacagttcg ggccggtatc ggaaagtatc
      121 gaagcctgta ccgtcaaact gcaggagtaa ccgtcgttct tcaacaggct gatgaaaacc
      181 aacgacaagc tcaataggca gattgacgtg ttgcagaaac agtcggcagc catccacaac
      241 gaagcctata tcgaaatgaa cacgctgctt taccgccacc gcgaagtggt ttccgtccac
      301 aaccgcaagg cggattatgc ggaaaagggc aaagagcgga ttgcgctgtt cccgcgcggc
      361 ttgaacggca tcaccaagct gcctgccgcc gtcctgttgc ccgagcgtcc cgattgtttt
      421 gatatgaagg cagtttggca aatgtttaat agaataccga ggtaggcgta tcggctgccg
      481 gataaaaatg ccgtctgaaa cggaagcgtt cagacggcat tgttgcagtg gaacaaatca
      541 aaatgcaccc cgtcattcct gtctgtacgg tgatagcggc agtgttttcc tgcttcg
//
LOCUS       DBBZYD010000184          595 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.184, whole genome shotgun sequence.
ACCESSION   DBBZYD010000184 DBBZYD010000000
VERSION     DBBZYD010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.184"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(319..>595)
                     /locus_tag="ACJJDL_002036"
     CDS             complement(319..>595)
                     /locus_tag="ACJJDL_002036"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574674.1"
                     /translation="YWFLLIHYIFARRGEKYSCYSPTYARFASILRPFMCNTLHLLNK
                     IQTTLYIKCKKYAVIPANAGIQTPRHGNLSSKTVSQILRSRFPRSRE"
BASE COUNT          174 a          141 c          153 g          127 t
ORIGIN      
        1 tagaatctga gaaaccgttt tactcgataa atttccgtgc cgaggggtct ggattcccgc
       61 cttcgcggga atgacggcat cagtttgcag gattcggcgt gaacggtaaa aacggcagaa
      121 tcgatgggat gcggcaggct gaagcccacc aaaacacaaa aattccgatg ccgtctgaaa
      181 tttcgtcatt cccgtgaaaa cgggaatcca gccccgtggg agcagaaact tacaccccgt
      241 cattcccgca aaagcgggaa tccagtaacc gaaaaaccac aggaatctat cggaaaaaaa
      301 cagaaccccc cgccgccgtc attcccgcga acgcgggaat ctagaacgta gaatctgaga
      361 aaccgtttta ctcgataaat ttccatgccg aggggtctgg attcccgcgt tcgcgggaat
      421 gacggcatat tttttgcatt tgatataaag ggtcgtttga attttgttca gcaagtgcaa
      481 agtgttgcac ataaaagggc gcaggataga ggcaaagcgg gcgtaggtcg ggctgtagca
      541 actgtatttt tcaccccgtc gggcaaaaat atagtggatt aacaaaaacc agtac
//
LOCUS       DBBZYD010000185          587 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.185, whole genome shotgun sequence.
ACCESSION   DBBZYD010000185 DBBZYD010000000
VERSION     DBBZYD010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.185"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          144 a          149 c          132 g          162 t
ORIGIN      
        1 ggaatccagt ttcttgagtt tcagtcattc ccgataaatt gccttagcat tgaatgtcta
       61 gattcccgcc tgcgcgggaa tgacgaatcc atccctacgg aaacctgcac cacgtcattc
      121 ccacgaaagt gggaatccag ttttttgagt ttcagtcatt cccgataaat tgccttagta
      181 ttgaatgtct agactcccgc ctgcgcggga atgacggatt ttaggttggg gtcatttatt
      241 ggaaaaagca gaaaccgctc tgccgtcatt cccacgaaag tgggaatcca gttttttgag
      301 tttcagtcat tcccgataaa ttgccttagc attgaatgtc tagattctcg cctgcgcggg
      361 aatgacgaat ccatccgtac ggaaacctgc accacgtcat tcccacgaac ctgcatcccg
      421 tcattcccac gaaagtggga atccagcttt ttgagtttca gtcatttccg ataaattgcc
      481 ttagcattga atgtctagat tcccgcctgc gcgggaatga cgggatttga aattgcggca
      541 tttatcggga gcaacagaag ccgctctgcc gtcattccca cgaaagt
//
LOCUS       DBBZYD010000186          581 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.186, whole genome shotgun sequence.
ACCESSION   DBBZYD010000186 DBBZYD010000000
VERSION     DBBZYD010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.186"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(146..502)
                     /locus_tag="ACJJDL_002037"
                     /pseudo
     CDS             complement(146..502)
                     /locus_tag="ACJJDL_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688109.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            501..>581
                     /locus_tag="ACJJDL_002038"
     CDS             501..>581
                     /locus_tag="ACJJDL_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7574675.1"
                     /translation="MLPSKYEDNALQIKEKSTERTAPFFCA"
BASE COUNT          210 a          119 c           99 g          153 t
ORIGIN      
        1 gcctctaaaa aataatcgct tgttttgaca ccgatacact catatagtgg attaacaaaa
       61 atcaggacaa ggcgacgaag ccgcagacag tacagatagt acggcaaggc gaggcaacgc
      121 tgtactggtt taaatttaat ccactataca aatacagaaa ctcaagaaaa taaccttgtg
      181 tattaaccat ctcaagcaat tcagaaaaat caagaaattt tctgaccgta aacaaacgtt
      241 tccctaaaaa aacgatgtct tcaaaaatat cgaccaaata atcatcttcg ccgttttcat
      301 ttttatgggt taaaacaaca cgggaaaaat ctgttttcag atgcttgccc gcttgattgt
      361 tcggattatt gtccggaacg acaaaaccgt cctcaaaatc aaagtagacg ttgcgtcctt
      421 ctacctttat ctctgtgcaa taacaatcat gcagagaaat accatccgaa aaatttaggg
      481 gctgtactag attagcagat atgttaccct cgaaatatga agataacgca ctgcaaatta
      541 aagaaaaaag tacagaaaga actgctccgt ttttttgtgc t
//
LOCUS       DBBZYD010000187          578 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.187, whole genome shotgun sequence.
ACCESSION   DBBZYD010000187 DBBZYD010000000
VERSION     DBBZYD010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.187"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..130)
                     /locus_tag="ACJJDL_002039"
     CDS             complement(<1..130)
                     /locus_tag="ACJJDL_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7574676.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKP"
     gene            complement(251..562)
                     /gene="rpsJ"
                     /locus_tag="ACJJDL_002040"
     CDS             complement(251..562)
                     /gene="rpsJ"
                     /locus_tag="ACJJDL_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HGG7574677.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHMNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
BASE COUNT          139 a          116 c          149 g          174 t
ORIGIN      
        1 cgggtttttg acggttcagg tattgttcga tcggctgcca atcaatcacc tggtccaact
       61 tcaatagcgg gaaacggtcg atgtgtttgg caatcatggc ttgggcggtt tgttggaaga
      121 aggtgctcat gagaaatccc ctaaatgtct tggtgggaat ttaggggatt ttggggaatt
      181 ttgcaaaggt ctcggcataa cataaaaaat ccccaagcat tgattgcttg gggattttca
      241 atagtccgaa ttattggact ttgatttcta catcaacacc ggccggcaaa tccagcttca
      301 tcagcgcatc ggtagtttta tcggtccaat ccacgatgtc catcaggcgc aagtgggtgc
      361 ggatttccaa ttgttcacgg gaagttttgt tcatgtgcgg agaacgcaga atgttgaaac
      421 gttcgatttt ggtcggcaac ggaatcggac cttttacaac ggcaccggta cgttttgcag
      481 tttcaacgat ttcttgtgca gaacggtcaa tcagggcgta atcataagct ttcaggcgga
      541 tacggatttt ttggtttgcc atttatcaat atccttca
//
LOCUS       DBBZYD010000188          564 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.188, whole genome shotgun sequence.
ACCESSION   DBBZYD010000188 DBBZYD010000000
VERSION     DBBZYD010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.188"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..487
                     /locus_tag="ACJJDL_002041"
     CDS             <1..487
                     /locus_tag="ACJJDL_002041"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574678.1"
                     /translation="IGGSLQPHQMPSEHVFGRRFVGGYRSGTSEKGFQAVFGRVVTVE
                     NVIRLPEKFGRFSGSLWYWAQQTQVQIRRCAVIVRMPIQPKQTSVFRKWMFDGAKVVR
                     RMEGNLWVFGMVALEKTCFKGQMPSENRFQTAFSVYLKQTGKGSNILQSSYSHKRFIV
                     N"
BASE COUNT          164 a           94 c          157 g          149 t
ORIGIN      
        1 aataggggga agtctgcagc cgcatcaaat gccgtctgaa catgtgttcg ggcggcgttt
       61 tgttgggggg tatcggagtg gaacgtctga aaaagggttt caggcggtct ttgggcgtgt
      121 ggtgacagtc gaaaacgtga taaggctacc tgaaaagttt gggagatttt caggtagcct
      181 ttggtattgg gcgcaacaga cgcaggtaca gattaggcgg tgtgccgtaa tcgtacgaat
      241 gccgattcaa cctaagcaga catcagtatt taggaagtgg atgtttgatg gagcaaaggt
      301 tgtacgaagg atggaaggca acctgtgggt gtttggtatg gtcgcgcttg aaaaaacgtg
      361 ttttaaggga caaatgccgt ctgaaaatcg gtttcagacg gcattttctg tttatttaaa
      421 gcaaacagga aaaggcagca atattctgca gtcttcctat tcacacaagc gttttatagt
      481 taattaaaaa caaaatagta caatactcaa ctttgaaggt ctaaccatgg catactctgc
      541 ggacttaaga aacaaagctt taaa
//
LOCUS       DBBZYD010000189          560 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.189, whole genome shotgun sequence.
ACCESSION   DBBZYD010000189 DBBZYD010000000
VERSION     DBBZYD010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.189"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..454)
                     /locus_tag="ACJJDL_002042"
     CDS             complement(<1..454)
                     /locus_tag="ACJJDL_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7574679.1"
                     /translation="MPSFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRERY
                     PFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSKYLIGGNLRLWQKPFWEHTI
                     RDEADFACHFDYLHFNPVKHGYVGQISDWRFSTFHRYVKQGIYPHNWGG"
BASE COUNT          156 a          131 c          128 g          145 t
ORIGIN      
        1 cgccacccca attatgcgga taaataccct gtttgacata acggtgaaac gtagaaaacc
       61 gccaatcgga aatttgtcct acatagccat gtttgaccgg attgaaatgc agataatcaa
      121 aatggcaggc aaaatcggcc tcatcgcgga tagtatgttc ccaaaagggt ttttgccaaa
      181 gcctgagatt gccgccgatt aaatatttgc tgtgccgctt gatctgccgc cagcgttccg
      241 aataagcaga atcattgtcc ggcagccgcc atatggtatg cagatggtcg ggcatcaaca
      301 cccatgccaa aatttcaaac ggataccgtt cgcgcaccgc cattaccgcc tgccgtaaag
      361 ccaaacgcac cgcatcatcg gtcaaaatct tctgccgttt attggttaca accgtaaaaa
      421 agtaagtgcc gccattgcgg taaaacgacg gtatttcata gtattatgct cggaatgatt
      481 ttgtaggtcg gattcttgaa ttcgacattt tgggcattgc tgcaatggat tgcaatgatg
      541 ggaatgttaa aggttttgtc
//
LOCUS       DBBZYD010000190          536 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.190, whole genome shotgun sequence.
ACCESSION   DBBZYD010000190 DBBZYD010000000
VERSION     DBBZYD010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.190"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          150 a          151 c          111 g          124 t
ORIGIN      
        1 caacgatgta ctggtttttg ttaatccact atatccgttt gcgcccacca agccgtgttg
       61 cacagatgcg acacggcttt tttctttccg ttgtcagaat gtaaattttc gtcaaaaaac
      121 atcaaaaatc accccccccc ccgaatttgc gtaaaataaa gtgtaatccc tttgatcata
      181 agggaatgtt gacaattaga tcgattctcc taggctgact ttcgcaataa atggggttgt
      241 caataattgt gtatggtcgt ttgccgtccg gcggccgtca ttcccgcgaa cgcaggaatc
      301 cagcaacaca atgcagcagg actttatcgg aaaaaaccga aaccccaccg ccgtcattcc
      361 cgcgcaggcg ggaatccagc aacacaacgc agcaggactt tatcggaaaa aaccgaaacc
      421 ccaccgaccg tcattcccgc aaaagcggga atccagaccc gtcggcacgg aaacttaccg
      481 gataaaacag tttccttaga ttccacgtcc tagattcccg ccttcgcggg aatgac
//
LOCUS       DBBZYD010000191          535 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.191, whole genome shotgun sequence.
ACCESSION   DBBZYD010000191 DBBZYD010000000
VERSION     DBBZYD010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.191"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..>535
                     /locus_tag="ACJJDL_002043"
     CDS             <1..>535
                     /locus_tag="ACJJDL_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PilC/PilY family type IV pilus protein"
                     /protein_id="HGG7574680.1"
                     /translation="PWTVRGFADDSKFKAFNKEKNNDNKPKYSQRYRIRENGNNGKRD
                     LGDIVNSPIVAVGEYLATSANDGMVHIFKKGNGGDARDYSLKLSYIPGTMPRKDIQSQ
                     DSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVNNLNGQDRVFMFGAMGFGGRGAYALD
                     LTKADGNDPTKASLFDVK"
BASE COUNT          147 a          137 c          148 g          103 t
ORIGIN      
        1 gccttggacg gttcggggtt ttgctgatga cagtaaattt aaagcattca acaaagaaaa
       61 aaacaacgac aacaagccaa aatacagcca aagataccgc atccgcgaaa acggcaacaa
      121 cggcaagcgc gatttgggcg acatcgtcaa cagccccatc gtggcggtcg gcgagtattt
      181 ggctacttcc gccaacgacg ggatggtgca tatcttcaaa aaaggcaacg gcggggacgc
      241 gcgcgactat agtctgaagc tcagctacat cccgggcacg atgccgcgca aggatattca
      301 aagtcaagac tccaccctcg ccaaagagct gcgcgccttt gccgaaaaag gctatgtggg
      361 cgaccgctac ggcgtggacg gcggctttgt cttgcgccaa gttaacaact taaatgggca
      421 agaccgcgtg tttatgttcg gcgcgatggg ctttggcggc agaggtgcgt atgccttgga
      481 tttgaccaaa gccgacggca atgacccgac aaaagcctct ttgtttgatg taaaa
//
LOCUS       DBBZYD010000192          512 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.192, whole genome shotgun sequence.
ACCESSION   DBBZYD010000192 DBBZYD010000000
VERSION     DBBZYD010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.192"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            24..431
                     /locus_tag="ACJJDL_002044"
     CDS             24..431
                     /locus_tag="ACJJDL_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HGG7574681.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
BASE COUNT          168 a           89 c          110 g          145 t
ORIGIN      
        1 gttgttgttt agaaggaggg aaaatgactt ataccactgc caaagccgcc gaaaaaatag
       61 gcatctccgc ccacacccta cgtttttacg acaaagaagg tttgttgcct aatatcggac
      121 gtgatgaata cggtaaccgc tgttttaccg ataacgattt gcaatggttg ggcttattgc
      181 aatgcttgaa aaatacggga atgagcttaa aagacatcaa acgctttgcg gaatgtaccg
      241 tcattggcga cgataccatt gaagaacgcc tttccttgtt tgaaaatcaa atagaaaatg
      301 tgaagtgtca aattgccgaa ttaaaacgct atttagattt gcttgaatac aaattggcgt
      361 tttaccaaaa agcgaaagca ttaggctcgg taaaagctgt aaatttgccg caaattcctg
      421 aaacggctta gttttagtgc aataagcagg atttttgtcc tgttcgtaat agaaatcaaa
      481 aatttgttgt ttaaaaagcg gattgtaagc aa
//
LOCUS       DBBZYD010000193          508 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.193, whole genome shotgun sequence.
ACCESSION   DBBZYD010000193 DBBZYD010000000
VERSION     DBBZYD010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.193"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          141 a          149 c           95 g          123 t
ORIGIN      
        1 accgtcattc ccgccacttt tcgtcattcc cgctcaggcg ggaatctaga atctcggact
       61 ttcagataat ctttgaatat tgctgttgtt ctaaggtctg gattcccgcc tgcgcgggaa
      121 tgacgaatcc atccgcacgg aaacctatat cccgtcattc ctacgaacct acatcccgtc
      181 attccctcaa aaacagaaaa ccaaaattag aaacctaaaa tcccgtcatt cccgcgcagg
      241 cgggaatcca aacttgtccg cacggaaact tatcggataa aacggtttct tagattccac
      301 gttctagatt cccgcctgcg cgggaatgac gaatccatcc gcacggaaac ctatatcccg
      361 tcattcttac gaacctacat cccgtcattc cctcaaaaac agaaaaccaa aattagaaac
      421 ctaaaatccc gtcattcccg cgcaggcggg aatctaggtc tgtcggtgcg gaaacttatc
      481 gggtaaaacg gtttctttag attccacg
//
LOCUS       DBBZYD010000194          497 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.194, whole genome shotgun sequence.
ACCESSION   DBBZYD010000194 DBBZYD010000000
VERSION     DBBZYD010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.194"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            46..497
                     /locus_tag="ACJJDL_002045"
                     /pseudo
     CDS             46..497
                     /locus_tag="ACJJDL_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          138 a          132 c          140 g           87 t
ORIGIN      
        1 gcccggatgc ctgattatcg ggtatccgga gaggattaag gggggatttg ggtagaatta
       61 ggcggtattt ggggcgaaaa cagccgaaaa cagctgaaaa cagctgaaaa cagctgaaaa
      121 cctgtgtttg ggtttcggct gtcgggaggg aaaggaattt tgcaaaggtc tcaggtcgca
      181 ctcgtcgtga cggaaagtac cggcggtctc gaaatccccg ccgccaaagc catccgccga
      241 gcaggcatag ccgtgattat cgccaacccg cgtcagacgc atcagtttgc ccaatcgcag
      301 ccgctgacca aaaccgacgc caaagatgcc aaaatgcccg ccttcttcac acagatgatg
      361 acgcagaaag aagattggca aaccatgccc taccaaccgc ccaccgaagc ggaagaagtg
      421 ttggaagcct tggttaaccg ccgcaaccaa tcggcggata tgcggactgc cgagaaaaac
      481 cgtctgcatc aggttca
//
LOCUS       DBBZYD010000195          496 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.195, whole genome shotgun sequence.
ACCESSION   DBBZYD010000195 DBBZYD010000000
VERSION     DBBZYD010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.195"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            20..403
                     /locus_tag="ACJJDL_002046"
     CDS             20..403
                     /locus_tag="ACJJDL_002046"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HGG7574682.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
BASE COUNT          109 a          125 c          127 g          135 t
ORIGIN      
        1 acattttgaa aggataccga tggaaccttc ctcctacgcg gcagaaaaaa aaggcaaagg
       61 cggcatcagg cgcgtcatta acgcattcgg ctattcgata gacggcatcg ccgccgccta
      121 ccgttacgaa gcggcattcc gtcaggtttt gtggctgaac gtactgctgg tgtgcgcggc
      181 atttttttgg gtttccgaaa ccgccgtccg cctgccgttg atcatcgcgt cttttgtgtc
      241 ggtcattgtc gaactgttca acaccgccgt cgaagctgcc gtcgatcata cttcgaccga
      301 aaaacacgag ctggccaaac gcgccaaaga cgcaggttct gccgcacaat tgttcgcgat
      361 gctgatgttg gcggcggttt ggctgtctgc cctgttcggg taaaacgctt gcagcaggat
      421 ttgtaatcct ttaggattag tatgtggtat ttattattca cttaatctac atcaaatttc
      481 caggcagtat ttgtat
//
LOCUS       DBBZYD010000196          488 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.196, whole genome shotgun sequence.
ACCESSION   DBBZYD010000196 DBBZYD010000000
VERSION     DBBZYD010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.196"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          141 a          102 c          114 g          131 t
ORIGIN      
        1 agtggaagtt acccgaaact taaaacaagc gaaaccgaac gaaccggatt cccactttcg
       61 tgggaatgac ggcggagcgg tttctgcttt ttccaataaa tgcccccaac ctaaaatccg
      121 tcattcccgc gtaggcggga atctagacat tcaatgctaa ggcaatttat cggaaatgac
      181 tgaaactcaa aaaactggat tcccactttc gtgggaatga cgggatgcag gtttccgtat
      241 ggatggattc gtcattcccg cgcaggcggg aatctaggtc tgtcagtgcg gaaacttatc
      301 aggtaaaacg gtttcttgag attttgcgtc ctggattccc actttcgtgg gaatgacgcg
      361 attagagttt caaaatttat tctaaatagc tgaaactcaa tgaaccggat tcccgcctga
      421 gcgggaatga cgggattaag ttttcaaaat tcatcagaaa ttattgattc aatggcataa
      481 atttttga
//
LOCUS       DBBZYD010000197          480 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.197, whole genome shotgun sequence.
ACCESSION   DBBZYD010000197 DBBZYD010000000
VERSION     DBBZYD010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.197"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(297..372)
                     /locus_tag="ACJJDL_002047"
     tRNA            complement(297..372)
                     /locus_tag="ACJJDL_002047"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(336..338),aa:Glu,seq:ttc)
BASE COUNT          129 a          114 c          121 g          116 t
ORIGIN      
        1 gtctgaaaat tcagaagttc tagattcccg ttttcacggg aatgacgaag ggttgtggga
       61 atgacgaagt ttcagacggc atcaaatgct ttgtcaggct tcagacagca tcgtccaccc
      121 tctgccgtca ttcccgcgca ggcgggaatc cagccttgtc ggcacggaaa cttatcggat
      181 aaaacggttt cttcaaccct acgctctaga ttcccgtttt cacgggaatg acgaagagtg
      241 tgagaatgac ggttcataaa taaaaaaacc tgcttaaaac aagcaggttt ttgaattggc
      301 acgcccacgg ggattcgaac cccggttgcc gccgtgaaag ggcagtgtcc taggcctcta
      361 gacgatgggc gcgtgggaat gggcattata catacttcta gaaatttagc aatacgatgc
      421 cgtctgaaac ttcgtcattc ccgcgaaagc gggaatctag aatctccaag ttttcagaca
//
LOCUS       DBBZYD010000198          475 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.198, whole genome shotgun sequence.
ACCESSION   DBBZYD010000198 DBBZYD010000000
VERSION     DBBZYD010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.198"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          139 a          111 c           94 g          131 t
ORIGIN      
        1 cggagagggt ttgttgtttc ggataaatcc ctgtagtttt tcgtttctag attcccgctt
       61 ttgcgggaat gacggcgggg ggatttctgt ttttccgaca aattcctaaa acttaaaatt
      121 ccgttattcc cgcgaaaaca gaaaaccaaa aatagaaacc taaaatctcg tcattcccgc
      181 aaaaacagaa aaccaaaaaa cagcaaccta aaattcgtca ttcccgcgca ggcgggaatc
      241 cagtccgttc ggtttcgctt gttttaagtt tcgggcaact tccacttcgt cattcccgtg
      301 aaagtgggaa tccagtccgt tgagtttcag tcatttccga taaatcaccg caacattaaa
      361 tttccagatt cccgcttttg cgggaatgac ggcgggggga tttctgtttt tccgacaaat
      421 tcctaaaact taaaattccg ttattcccgc gagaacagaa aaccaaaaac agaaa
//
LOCUS       DBBZYD010000199          458 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.199, whole genome shotgun sequence.
ACCESSION   DBBZYD010000199 DBBZYD010000000
VERSION     DBBZYD010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.199"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            47..312
                     /locus_tag="ACJJDL_002048"
                     /pseudo
     CDS             47..312
                     /locus_tag="ACJJDL_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          116 a          104 c          142 g           96 t
ORIGIN      
        1 atacgattga agtaatgtcg gattcgagaa tccgacctac ggaaaactga aagagcatcg
       61 gctgcaggac ggcattatgc gcaaagcctg ccgcaaccgt ccgctgtcgg aggcgcaaac
      121 caaacgcaac cggtatttgt cgaagacccg ttatgtggtc gaacagagct tcggtacgct
      181 gcaccgtaaa ttccgctacg ctcgggcagc ctatttcgga ctgattaagt gagtgcgcaa
      241 agccacctga aggcgatgtg tttgaacctg ttgaaagccg ccaacaggct aagtgcgccc
      301 gctgccgcct aaaaggcagc ccggatgcct gattatcggg tatccgggga ggattaaggg
      361 ggtatttggg tagaattagg aggtatttgg ggcgaaaaca gccgaaaacc tgtgtttggg
      421 tttcggctgt cgggagggaa gggaattttg caaaggtc
//
LOCUS       DBBZYD010000200          450 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.200, whole genome shotgun sequence.
ACCESSION   DBBZYD010000200 DBBZYD010000000
VERSION     DBBZYD010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.200"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            32..394
                     /locus_tag="ACJJDL_002049"
     CDS             32..394
                     /locus_tag="ACJJDL_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HGG7574683.1"
                     /translation="MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQESEQDRRERLLSLTEKGKAHAAPLTE
                     SAQEFSDKETFAKFPKIP"
BASE COUNT          139 a          126 c           99 g           86 t
ORIGIN      
        1 cgcacaaatt tagtcaatat caagaccaat tatgaaccaa ctcgaccaac ttggcacccg
       61 tatcaacctg atttgcaatg tcttcgacaa atggatcggg cagcaggatc tgaattacaa
      121 cctctttgcc gtactttata ccctggcaac cgaaggcagc cgcacgcaaa agcatatcgg
      181 cgaaaagtgg agcctgccca aacagaccgt ttcaggcgta tgcaaaaccc ttgccggaca
      241 agggttgatt gaatggcagg aaagcgaaca ggaccggcgc gaacggttgc tgtcgctgac
      301 cgaaaaaggc aaagcccatg ccgcaccttt aacagaaagc gcgcaggaat tcagcgacaa
      361 agagaccttt gcaaaattcc ccaaaatccc ctaaattccc accaagacat ttaggggatt
      421 ttccatgagc accttcttcc ggcaaaccgc
//
LOCUS       DBBZYD010000201          432 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.201, whole genome shotgun sequence.
ACCESSION   DBBZYD010000201 DBBZYD010000000
VERSION     DBBZYD010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.201"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            254..432
                     /locus_tag="ACJJDL_002050"
                     /pseudo
     CDS             254..432
                     /locus_tag="ACJJDL_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          118 a          107 c          102 g          105 t
ORIGIN      
        1 attcccactt tcgtgggaat gacgaaaagt ggcgggaatg acggttcggg cattccttaa
       61 atcacccgtg tatcgctgta aatcttagag atggcggaat atagcggatt aacaaaaacc
      121 agtacggcgt tgtcgcgcct tagctcaaag agaacgattc tctaaggtgc tgaagcacca
      181 agtgaatcgg ttccgtacta ttcgtactgt ctgcggcttc gtcgccttgt cctgattttt
      241 gttaatccac tatactttat gccgctaccg caactggctg gcgcaagaca ataccctgtc
      301 tgaactgttg gaactgatta accgccaact gaccgaaaaa ggtttaaaaa tagagaaagc
      361 atccgccgcc gtcattgacg ccaccattat tcagaccgcc ggcagcaaac agcgtcaggc
      421 catagaagtt ga
//
LOCUS       DBBZYD010000202          400 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.202, whole genome shotgun sequence.
ACCESSION   DBBZYD010000202 DBBZYD010000000
VERSION     DBBZYD010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.202"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          105 a           87 c          107 g          101 t
ORIGIN      
        1 ctttcgtggg aatgacgaaa agtggcggga atgacgaaaa gtagcgggaa tgacgaaaag
       61 tggtgggaat gatggttcgg gcattcctta aatcccccgt gtatcgctgt aaatcttaga
      121 gatggcggaa tatagcggat taacaaaaac cagtacagcg ttgcctcgac ttagcttaaa
      181 gagaacgatt ctctaaggtg ctgaagcacc aagtgaatcg gttccgtact gtttgtattg
      241 tctgcagctt cgccgccttg tcctgatttt tgttaatcca ctataaagac cgtcgggcat
      301 ctgcggccgt cattcccgcg caggcgggaa tccagacctt aaggcagcgg caatattcaa
      361 agattatctg aaagtccgag attctggatt cccgcgttcg
//
LOCUS       DBBZYD010000203          389 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.203, whole genome shotgun sequence.
ACCESSION   DBBZYD010000203 DBBZYD010000000
VERSION     DBBZYD010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.203"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          108 a          101 c           75 g          105 t
ORIGIN      
        1 gttcggtttc ggtcatttac gataaattcc tattgctttt catttcctga ttcccacttc
       61 cgtgggaatg acggcggagc ggataaattc tcgcaatcta aaacctcgtc atttccataa
      121 aaaacagcaa cccgaaacag caacctgaaa ccttgtcatt ctcgcgtagg cgggaatcta
      181 gtccgttcgg tttcggtcat ttacgataaa ttcctgttgc ctttcatttc tagattccca
      241 cttccgtggg aatgacggcg gagcggataa attctcgcaa tctaaaacct cgtcatttcc
      301 ataaaaaaca gcaacccgaa acagcaactt aaaaacagca acctgaaacc tcgtcattcc
      361 cgcgcaggtg ggaatccaga tcattgggt
//
LOCUS       DBBZYD010000204          366 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.204, whole genome shotgun sequence.
ACCESSION   DBBZYD010000204 DBBZYD010000000
VERSION     DBBZYD010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.204"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..>366)
                     /locus_tag="ACJJDL_002051"
     CDS             complement(<1..>366)
                     /locus_tag="ACJJDL_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574684.1"
                     /translation="VKEYQPPVGIFLFVCFEKCLFPDFAIPIRFCAVRCVLARTCSKS
                     DVVPVFEALIRDADFQYIFLSYNNEGLMSVGQVREIFECFGKYNLVQTEYRRFKADKT
                     ENRNHKANSIFEYLHILEKT"
BASE COUNT          123 a           87 c           59 g           97 t
ORIGIN      
        1 gtcttttcta aaatatgcag atattcgaat atcgaatttg ccttatgatt acggttttct
       61 gtcttatctg ccttaaaacg ccggtattcc gtttgaacca aattatattt gccgaaacac
      121 tcaaaaatct cccttacctg cccgacagac atcaagcctt cgttgttgta gctgagaaaa
      181 atatattgaa agtccgcatc cctaatcaaa gcctcaaata ccggaaccac atccgatttt
      241 gagcaagtcc gcgctaaaac acatcgtaca gcgcaaaacc ggatgggaat ggcaaaatcc
      301 ggaaacaaac atttttcaaa gcatacaaac aaaaaaatac caaccggagg ttggtattcc
      361 ttaact
//
LOCUS       DBBZYD010000205          361 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.205, whole genome shotgun sequence.
ACCESSION   DBBZYD010000205 DBBZYD010000000
VERSION     DBBZYD010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.205"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT          117 a           84 c           61 g           99 t
ORIGIN      
        1 cgcaaaagtc aatttgcatg gggttaattc aaaatccgcc cttcatctgc ccgcttccct
       61 aaaaaaaacc gtatatatat aactgtctgc attctatcgc tccggcgacg atacccatat
      121 ttccaagttt gtgtatcaaa attgtatatc gggcatagac tatttcggcg aggacgaaga
      181 tatagatttc cacgattgaa tacatggaag ccaagtacgt ctatcaacac tatattaaaa
      241 cacagccttt tttttgaggt ttcgggtaac ttttaaaccg tcattcctac gaaaacagaa
      301 aatcaaaaac agaaatctca aatcccgtca ttcccgcgca ggcgggaatc tagacattca
      361 a
//
LOCUS       DBBZYD010000206          334 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.206, whole genome shotgun sequence.
ACCESSION   DBBZYD010000206 DBBZYD010000000
VERSION     DBBZYD010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.206"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT           96 a           73 c           71 g           94 t
ORIGIN      
        1 tttttttgaa tttcgggcaa cgcttgaatc ttcattccgc gcaggcggaa attatcggtg
       61 cggtacggca acttttttcg atatgaaaag accgtcattc ctgtaaaaac aaaaaatcaa
      121 aaacagaaaa ttgaaattcg tcattcccgc gcaggcggga atctaggacg taaaatctat
      181 agtggattaa caaaaaccag tacagcgttg ccttgactta gctcgaagag aacgattctc
      241 taaggtgctg aagcaccgag tgagtcggtt ccgcactatc cgtactgtct gcggcttcgt
      301 cgctttctcc tgatttttgt taatccacta taaa
//
LOCUS       DBBZYD010000207          328 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.207, whole genome shotgun sequence.
ACCESSION   DBBZYD010000207 DBBZYD010000000
VERSION     DBBZYD010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.207"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT           99 a           88 c           62 g           79 t
ORIGIN      
        1 taagtttctg tgccgacaga cctagattcc cgcctgcgcg ggaatgacgg gatttgagat
       61 tgcggcattt atcgggagca acagaatccg ctctgccgtc attcccacga aagtgggaat
      121 ccaggacgca aaatctcaag aaaccgtttt gcccgataag tttccgcacc gacagaccta
      181 gattcccgcc tgcgtgggaa tgacggcgga aagattctat ttttcccgat aatcacccac
      241 aatctcaaat tccttcattc tctcaaaaac aaaatcagaa ccctaaatcc catcatcccc
      301 atctatgtga atataaaaat tttaaaaa
//
LOCUS       DBBZYD010000208          325 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.208, whole genome shotgun sequence.
ACCESSION   DBBZYD010000208 DBBZYD010000000
VERSION     DBBZYD010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.208"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT           88 a           70 c           90 g           77 t
ORIGIN      
        1 cccccaaact aaaatccgtc attcccgcgc aggcgggaat ctagacattc aatgctaagg
       61 cactttatcg ggaatgactg aaactcaaaa aactggattc ccactttcgt gggaatgacg
      121 ggatgcaggt tcgtgggaat gacgtggtgc aggtttccgt acggatggat tcgtcattcc
      181 cgcacaggcg ggaatctaga cattcaatgc taaggcaatt tatcgggaat gactgaaact
      241 caaaaaacta gattcccact ttcgtgggaa tgacgggatg caggttcgtg ggaatgacgt
      301 ggtgcaggtt tccgtacgga tggat
//
LOCUS       DBBZYD010000209          302 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.209, whole genome shotgun sequence.
ACCESSION   DBBZYD010000209 DBBZYD010000000
VERSION     DBBZYD010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.209"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            82..>302
                     /locus_tag="ACJJDL_002052"
     CDS             82..>302
                     /locus_tag="ACJJDL_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter substrate-binding protein"
                     /protein_id="HGG7574685.1"
                     /translation="MLRLTALTLCTVLALGACSPKDSDSAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTL"
BASE COUNT           65 a           98 c           65 g           74 t
ORIGIN      
        1 tatcatttat ccttttctaa agccgttccg gtttgtccga ccggcggctt tgccccaata
       61 tccccatttt ggagacaccc tatgttgcgt ttgaccgcat tgaccctctg caccgtcctc
      121 gccttgggcg cgtgttcgcc gaaagattcc gactctgccc cacaagccaa agaacaggca
      181 gtttccgccg cacaatccga aagcgcgtcc gttaccgtca aaaccgcgcg cggcgatgtt
      241 caaataccgc aaaaccccga acgtatcgcc gtttacgatt tgggtatgct cgacacttta
      301 aa
//
LOCUS       DBBZYD010000210          291 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.210, whole genome shotgun sequence.
ACCESSION   DBBZYD010000210 DBBZYD010000000
VERSION     DBBZYD010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.210"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            complement(<1..>291)
                     /locus_tag="ACJJDL_002053"
     CDS             complement(<1..>291)
                     /locus_tag="ACJJDL_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HGG7574686.1"
                     /translation="HTHTHFDGKDQVAEQIKGIGSITTATLMAMLPELGRLSHKRIAG
                     LAGIAPHPREGGETKFKSRCFGGRSAVRKALYMATVAATRFEPLIRDFHQRP"
BASE COUNT           53 a           89 c           80 g           69 t
ORIGIN      
        1 gcgggcgttg gtggaaatcc cgaataagcg gttcaaaacg tgtcgctgcc acggtagcca
       61 tatacagtgc tttacgcacc gcagaccttc cgccaaagca gcggcttttg aatttggttt
      121 ccccgccctc cctcgggtgc ggggcaatgc cggccaaacc cgctatccgt ttgtgcgaca
      181 gccgccccaa ttcgggcaac atcgccatca gcgtagccgt cgttatcgaa ccgatgcctt
      241 tgatttgctc cgccacttgg tctttgccgt caaaatgcgt gtgggtgtgg t
//
LOCUS       DBBZYD010000211          260 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.211, whole genome shotgun sequence.
ACCESSION   DBBZYD010000211 DBBZYD010000000
VERSION     DBBZYD010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.211"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
     gene            <1..>260
                     /locus_tag="ACJJDL_002054"
     CDS             <1..>260
                     /locus_tag="ACJJDL_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7574687.1"
                     /translation="FGAKTAENSRKPVFGFRLSGGKGILQRSRALIAAKIDQAEISDS
                     EKSWLKKELGKIKDTALSTLTENAINAIPAATLITLLKKFVGL"
BASE COUNT           85 a           47 c           63 g           65 t
ORIGIN      
        1 tttggggcga aaacagctga aaacagccga aaacctgtgt ttgggtttcg gctgtcggga
       61 gggaaaggaa ttttgcaaag gtctcgggct ttaattgcgg caaaaataga ccaagcggag
      121 atttctgatt cagaaaaaag ctggttgaaa aaagaattag ggaaaatcaa ggacactgca
      181 ttaagtacgc ttacggaaaa tgcaattaat gctatccctg ccgccaccct cattactctt
      241 ttaaaaaaat ttgttggcct
//
LOCUS       DBBZYD010000212          257 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate NZ24MI0003
            SAMN41083621-rid24040673.denovo.212, whole genome shotgun sequence.
ACCESSION   DBBZYD010000212 DBBZYD010000000
VERSION     DBBZYD010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN41083621
            Sequence Read Archive: SRR28806043
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479066.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479066.1
            Genome Coverage       :: 299x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:34:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,054
            CDSs (total)                      :: 1,999
            Genes (coding)                    :: 1,881
            CDSs (with protein)               :: 1,881
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 57 of 118
            Pseudo Genes (incomplete)         :: 70 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN41083621-rid24040673.denovo.212"
                     /isolate="NZ24MI0003"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /lat_lon="40.9006 S 174.8860 E"
                     /collection_date="2023"
                     /collected_by="ESR"
BASE COUNT           87 a           54 c           52 g           64 t
ORIGIN      
        1 tttttgttaa tccactataa tttattgaag atggctgaaa ttcaaagtta cagaaattta
       61 taaacaaaaa acagcaaccc gccgccgtca ttcccgcgaa agcgggaatc cagtcccttg
      121 accttaagat aatctttaat tcgtcattcc cgcaaaagcg agaatccgga agcgaaaagt
      181 ggtgggaatg tattagaaat gactgaaact caaaaaaccg gattcccgcc tgcgcgggaa
      241 tgacgattga tacgttt
//
